ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal36b16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464397.1| Oryza sativa (japonica cultivar-group), mRNA 280 5e-72
2dbj|AK120425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 5e-72
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
4dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
5dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
6gb|BT017715.1| Zea mays clone EL01N0446G10.c mRNA sequence 218 2e-53
7ref|XM_467595.1| Oryza sativa (japonica cultivar-group), mRNA 90 1e-14
8dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
9ref|NM_181804.1| Homo sapiens protein kinase (cAMP-dependent, ca... 44 0.55
10ref|NM_181805.1| Homo sapiens protein kinase (cAMP-dependent, ca... 44 0.55
11ref|NM_007066.3| Homo sapiens protein kinase (cAMP-dependent, ca... 44 0.55
12gb|BC104256.1| Homo sapiens protein kinase (cAMP-dependent, cata... 44 0.55
13gb|BC104257.1| Homo sapiens protein kinase (cAMP-dependent, cata... 44 0.55
14emb|Z97053.2|HS179M20 Human DNA sequence from clone RP1-179M20 o... 44 0.55
15gb|AF115966.1| Homo sapiens protein kinase inhibitor gamma mRNA,... 44 0.55
16emb|CR623057.1| full-length cDNA clone CS0DI056YO14 of Placenta ... 44 0.55
17gb|AF182032.1|AF182032 Homo sapiens protein kinase inhibitor gam... 44 0.55
18dbj|AB019517.1| Homo sapiens PKIG mRNA for protein kinase inhibi... 44 0.55
19ref|XM_630607.1| Dictyostelium discoideum hypothetical protein (... 42 2.2
20gb|AF489515.1| Streptomyces thermovulgaris malate synthase (aceB... 42 2.2
21gb|AC124391.3| Mus musculus BAC clone RP24-439L13 from chromosom... 42 2.2
22gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 2.2
23gb|CP000088.1| Thermobifida fusca YX, complete genome 42 2.2
24gb|AC093529.2| Homo sapiens chromosome 5 clone RP11-29K14, compl... 42 2.2
25gb|AC094109.2| Homo sapiens chromosome 5 clone RP11-62E10, compl... 42 2.2
26gb|AC068323.8|AC068323 Homo sapiens chromosome 5 clone RP11-62E1... 42 2.2
27emb|AM181475.1| Microbacterium aerolatum partial gyrB gene for D... 42 2.2
28dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 2.2
29gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.6
30gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
31gb|AY242833.1| Bosea minatitlanensis strain AMX51 RNA polymerase... 40 8.6
32ref|XM_367034.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 40 8.6
33ref|XM_567595.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 8.6
34gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 8.6
35emb|AL450428.6| Human DNA sequence from clone RP11-264J11 on chr... 40 8.6
36gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 8.6
37emb|AL139192.8| Human DNA sequence from clone RP11-515I23 on chr... 40 8.6
38emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 40 8.6
39emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 40 8.6
40emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 40 8.6
41emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 40 8.6
42emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluste... 40 8.6
43gb|AC020906.6| Homo sapiens chromosome 19 clone CTB-83J15, compl... 40 8.6
44gb|AC120781.23| Pan troglodytes clone rp43-28m17, complete sequence 40 8.6
45dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
46gb|AY011374.1| Manis pentadactyla amyloid beta precursor protein... 40 8.6
47emb|BX088527.5| Zebrafish DNA sequence from clone DKEY-200F8 in ... 40 8.6
48emb|BX005073.7| Zebrafish DNA sequence from clone CH211-129N18, ... 40 8.6
49dbj|AK069995.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
50gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 8.6
51emb|AL929374.7| Zebrafish DNA sequence from clone CH211-89M7 in ... 40 8.6
52emb|AL021447.3|CEF19B2 Caenorhabditis elegans Cosmid F19B2, comp... 40 8.6
53gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
54gb|AC122183.4| Mus musculus BAC clone RP23-14P23 from 3, complet... 40 8.6
55gb|U90027.1|SSU90027 Staphylococcus simulans 16S-23S ribosomal R... 40 8.6
56gb|U90026.1|SSU90026 Staphylococcus simulans 16S-23S ribosomal R... 40 8.6
57gb|U90025.1|SSU90025 Staphylococcus simulans 16S-23S ribosomal R... 40 8.6
58gb|U90023.1|SSU90023 Staphylococcus simulans 16S-23S ribosomal R... 40 8.6
59gb|U90022.1|SSU90022 Staphylococcus simulans 16S-23S ribosomal R... 40 8.6
60gb|U39814.1|SSU39814 Staphylococcus simulans 16S-23S ribosomal R... 40 8.6
61gb|U39813.1|SSU39813 Staphylococcus simulans 16S-23S ribosomal R... 40 8.6
62emb|AL606487.15| Mouse DNA sequence from clone RP23-342L24 on ch... 40 8.6 
>ref|XM_464397.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 722

 Score =  280 bits (141), Expect = 5e-72
 Identities = 201/221 (90%)
 Strand = Plus / Minus

                                                                       
Query: 302 tcgtcttctgggaacctacgatcatccatcatacgcctgcggcggttgcggcggccggcc 361
           |||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcgtcttctgggaacctaggctcctccatcatacgcctgcggcggttgcggcggccggcc 422

                                                                       
Query: 362 tcgcgggccttgcgaatcttcttgtccttggtgttctcgtgccggcggcggcgcttgatc 421
           ||||||||||||||  |   || ||||||  || ||||||  ||||||||||||||||||
Sbjct: 421 tcgcgggccttgcgcttgcgctcgtccttcttgctctcgtagcggcggcggcgcttgatc 362

                                                                       
Query: 422 tcctggagcaggccggccttcatcacctcccgccggaagcgccggaagatggagtcctcc 481
           |||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 361 tcctggagcacgccggccctcatcacctcccgccggaaccgccggaagatggactcctcc 302

                                                    
Query: 482 ccctcgttctcgtccaccacgatctgcacgttgtagccctt 522
           ||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 301 ccctcgttctcgtccaccacgatctgcacattgtacccctt 261



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 588 tccccgagaacggagccaggggaagctggagcagggcgctca 629
           |||| |||||||| |||||||||||||| ||||| |||||||
Sbjct: 186 tcccggagaacggggccaggggaagctgcagcagcgcgctca 145
to top
>dbj|AK120425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095G03, full
           insert sequence
          Length = 722

 Score =  280 bits (141), Expect = 5e-72
 Identities = 201/221 (90%)
 Strand = Plus / Minus

                                                                       
Query: 302 tcgtcttctgggaacctacgatcatccatcatacgcctgcggcggttgcggcggccggcc 361
           |||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcgtcttctgggaacctaggctcctccatcatacgcctgcggcggttgcggcggccggcc 422

                                                                       
Query: 362 tcgcgggccttgcgaatcttcttgtccttggtgttctcgtgccggcggcggcgcttgatc 421
           ||||||||||||||  |   || ||||||  || ||||||  ||||||||||||||||||
Sbjct: 421 tcgcgggccttgcgcttgcgctcgtccttcttgctctcgtagcggcggcggcgcttgatc 362

                                                                       
Query: 422 tcctggagcaggccggccttcatcacctcccgccggaagcgccggaagatggagtcctcc 481
           |||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 361 tcctggagcacgccggccctcatcacctcccgccggaaccgccggaagatggactcctcc 302

                                                    
Query: 482 ccctcgttctcgtccaccacgatctgcacgttgtagccctt 522
           ||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 301 ccctcgttctcgtccaccacgatctgcacattgtacccctt 261



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 588 tccccgagaacggagccaggggaagctggagcagggcgctca 629
           |||| |||||||| |||||||||||||| ||||| |||||||
Sbjct: 186 tcccggagaacggggccaggggaagctgcagcagcgcgctca 145
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  234 bits (118), Expect = 3e-58
 Identities = 169/186 (90%)
 Strand = Plus / Plus

                                                                           
Query: 337     cctgcggcggttgcggcggccggcctcgcgggccttgcgaatcttcttgtccttggtgtt 396
               |||||||||||||||||||||||||||||||||||||||  |   || ||||||  || |
Sbjct: 4937352 cctgcggcggttgcggcggccggcctcgcgggccttgcgcttgcgctcgtccttcttgct 4937411

                                                                           
Query: 397     ctcgtgccggcggcggcgcttgatctcctggagcaggccggccttcatcacctcccgccg 456
               |||||  |||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 4937412 ctcgtagcggcggcggcgcttgatctcctggagcacgccggccctcatcacctcccgccg 4937471

                                                                           
Query: 457     gaagcgccggaagatggagtcctccccctcgttctcgtccaccacgatctgcacgttgta 516
               ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4937472 gaaccgccggaagatggactcctccccctcgttctcgtccaccacgatctgcacattgta 4937531

                     
Query: 517     gccctt 522
                |||||
Sbjct: 4937532 cccctt 4937537



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 76/85 (89%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                            
Query: 398      tcgtgccggcggcggcgcttgatctcctggagcaggccggccttcatcacctcccgccgg 457
                |||| |||||||||||| ||||||||||| |||  ||||||| ||||||||||| |||||
Sbjct: 30358879 tcgtaccggcggcggcgtttgatctcctg-agcgcgccggccgtcatcacctcctgccgg 30358821

                                         
Query: 458      aagcgccggaagatggagtcctccc 482
                || |||||||||||||| |||||||
Sbjct: 30358820 aaccgccggaagatggactcctccc 30358796



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                       
Query: 302     tcgtcttctgggaacctacgatcatccatcatacgcctgc 341
               |||||||||||||||||| | || ||||||||||||||||
Sbjct: 4936768 tcgtcttctgggaacctaggctcctccatcatacgcctgc 4936807



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                         
Query: 588     tccccgagaacggagccaggggaagctggagcagggcgctca 629
               |||| |||||||| |||||||||||||| ||||| |||||||
Sbjct: 4937612 tcccggagaacggggccaggggaagctgcagcagcgcgctca 4937653



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 348      tgcggcggccggcctcgcgg 367
                ||||||||||||||||||||
Sbjct: 30358922 tgcggcggccggcctcgcgg 30358903
to top
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBb0031B09
          Length = 132729

 Score =  234 bits (118), Expect = 3e-58
 Identities = 169/186 (90%)
 Strand = Plus / Plus

                                                                        
Query: 337  cctgcggcggttgcggcggccggcctcgcgggccttgcgaatcttcttgtccttggtgtt 396
            |||||||||||||||||||||||||||||||||||||||  |   || ||||||  || |
Sbjct: 8478 cctgcggcggttgcggcggccggcctcgcgggccttgcgcttgcgctcgtccttcttgct 8537

                                                                        
Query: 397  ctcgtgccggcggcggcgcttgatctcctggagcaggccggccttcatcacctcccgccg 456
            |||||  |||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 8538 ctcgtagcggcggcggcgcttgatctcctggagcacgccggccctcatcacctcccgccg 8597

                                                                        
Query: 457  gaagcgccggaagatggagtcctccccctcgttctcgtccaccacgatctgcacgttgta 516
            ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 8598 gaaccgccggaagatggactcctccccctcgttctcgtccaccacgatctgcacattgta 8657

                  
Query: 517  gccctt 522
             |||||
Sbjct: 8658 cccctt 8663



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                    
Query: 302  tcgtcttctgggaacctacgatcatccatcatacgcctgc 341
            |||||||||||||||||| | || ||||||||||||||||
Sbjct: 7894 tcgtcttctgggaacctaggctcctccatcatacgcctgc 7933



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 588  tccccgagaacggagccaggggaagctggagcagggcgctca 629
            |||| |||||||| |||||||||||||| ||||| |||||||
Sbjct: 8738 tcccggagaacggggccaggggaagctgcagcagcgcgctca 8779
to top
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1145_F01
          Length = 113755

 Score =  234 bits (118), Expect = 3e-58
 Identities = 169/186 (90%)
 Strand = Plus / Plus

                                                                         
Query: 337   cctgcggcggttgcggcggccggcctcgcgggccttgcgaatcttcttgtccttggtgtt 396
             |||||||||||||||||||||||||||||||||||||||  |   || ||||||  || |
Sbjct: 82091 cctgcggcggttgcggcggccggcctcgcgggccttgcgcttgcgctcgtccttcttgct 82150

                                                                         
Query: 397   ctcgtgccggcggcggcgcttgatctcctggagcaggccggccttcatcacctcccgccg 456
             |||||  |||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 82151 ctcgtagcggcggcggcgcttgatctcctggagcacgccggccctcatcacctcccgccg 82210

                                                                         
Query: 457   gaagcgccggaagatggagtcctccccctcgttctcgtccaccacgatctgcacgttgta 516
             ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 82211 gaaccgccggaagatggactcctccccctcgttctcgtccaccacgatctgcacattgta 82270

                   
Query: 517   gccctt 522
              |||||
Sbjct: 82271 cccctt 82276



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 302   tcgtcttctgggaacctacgatcatccatcatacgcctgc 341
             |||||||||||||||||| | || ||||||||||||||||
Sbjct: 81507 tcgtcttctgggaacctaggctcctccatcatacgcctgc 81546



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 588   tccccgagaacggagccaggggaagctggagcagggcgctca 629
             |||| |||||||| |||||||||||||| ||||| |||||||
Sbjct: 82351 tcccggagaacggggccaggggaagctgcagcagcgcgctca 82392
to top
>gb|BT017715.1| Zea mays clone EL01N0446G10.c mRNA sequence
          Length = 632

 Score =  218 bits (110), Expect = 2e-53
 Identities = 197/226 (87%)
 Strand = Plus / Minus

                                                                       
Query: 305 tcttctgggaacctacgatcatccatcatacgcctgcggcggttgcggcggccggcctcg 364
           ||||||||||||||  | |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 376 tcttctgggaacctcggctcatccatcatacgcctgcggcggttgcggcgcccggcctcg 317

                                                                       
Query: 365 cgggccttgcgaatcttcttgtccttggtgttctcgtgccggcggcggcgcttgatctcc 424
           || ||||||||  |||||| |||| |  || |||| | ||  || |||||||||||||||
Sbjct: 316 cgcgccttgcgcttcttctcgtccgtcttgctctcatacctccgacggcgcttgatctcc 257

                                                                       
Query: 425 tggagcaggccggccttcatcacctcccgccggaagcgccggaagatggagtcctccccc 484
           || |||| |||||||  ||||||| |||||||||| |||||||||||||| |||||||||
Sbjct: 256 tgcagcacgccggcccgcatcaccccccgccggaaccgccggaagatggactcctccccc 197

                                                         
Query: 485 tcgttctcgtccaccacgatctgcacgttgtagcccttagcggcca 530
           |||||||||||||||| |||| |||| ||||| ||||| |||||||
Sbjct: 196 tcgttctcgtccaccaggatccgcacattgtaccccttggcggcca 151
to top
>ref|XM_467595.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1551

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 76/85 (89%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                       
Query: 398 tcgtgccggcggcggcgcttgatctcctggagcaggccggccttcatcacctcccgccgg 457
           |||| |||||||||||| ||||||||||| |||  ||||||| ||||||||||| |||||
Sbjct: 143 tcgtaccggcggcggcgtttgatctcctg-agcgcgccggccgtcatcacctcctgccgg 85

                                    
Query: 458 aagcgccggaagatggagtcctccc 482
           || |||||||||||||| |||||||
Sbjct: 84  aaccgccggaagatggactcctccc 60



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 348 tgcggcggccggcctcgcgg 367
           ||||||||||||||||||||
Sbjct: 186 tgcggcggccggcctcgcgg 167
to top
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0072H09
          Length = 160541

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 76/85 (89%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                         
Query: 398   tcgtgccggcggcggcgcttgatctcctggagcaggccggccttcatcacctcccgccgg 457
             |||| |||||||||||| ||||||||||| |||  ||||||| ||||||||||| |||||
Sbjct: 39739 tcgtaccggcggcggcgtttgatctcctg-agcgcgccggccgtcatcacctcctgccgg 39681

                                      
Query: 458   aagcgccggaagatggagtcctccc 482
             || |||||||||||||| |||||||
Sbjct: 39680 aaccgccggaagatggactcctccc 39656



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   tgcggcggccggcctcgcgg 367
             ||||||||||||||||||||
Sbjct: 39782 tgcggcggccggcctcgcgg 39763
to top
>ref|NM_181804.1| Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor
           gamma (PKIG), transcript variant 3, mRNA
          Length = 1353

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 281 ctcacagcctctgagtctccct 302
           ||||||||||||||||||||||
Sbjct: 525 ctcacagcctctgagtctccct 504
to top
>ref|NM_181805.1| Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor
           gamma (PKIG), transcript variant 1, mRNA
          Length = 1458

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 281 ctcacagcctctgagtctccct 302
           ||||||||||||||||||||||
Sbjct: 630 ctcacagcctctgagtctccct 609
to top
>ref|NM_007066.3| Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor
           gamma (PKIG), transcript variant 2, mRNA
          Length = 1206

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 281 ctcacagcctctgagtctccct 302
           ||||||||||||||||||||||
Sbjct: 378 ctcacagcctctgagtctccct 357
to top
>gb|BC104256.1| Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor
           gamma, transcript variant 2, mRNA (cDNA clone MGC:126458
           IMAGE:40035945), complete cds
          Length = 694

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 281 ctcacagcctctgagtctccct 302
           ||||||||||||||||||||||
Sbjct: 366 ctcacagcctctgagtctccct 345
to top
>gb|BC104257.1| Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor
           gamma, transcript variant 2, mRNA (cDNA clone MGC:126459
           IMAGE:40035946), complete cds
          Length = 694

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 281 ctcacagcctctgagtctccct 302
           ||||||||||||||||||||||
Sbjct: 366 ctcacagcctctgagtctccct 345
to top
>emb|Z97053.2|HS179M20 Human DNA sequence from clone RP1-179M20 on chromosome 20 Contains the 3'
              end of the C20orf121 gene for chromosome 20 open reading
              frame 121, the TDE1 gene for tumour differentially
              expressed 1, the PKIG gene for protein kinase
              (cAMP-dependent, catalytic) inhibitor gamma, the 3' end of
              the ADA gene for adenosine deaminase and two CpG islands,
              complete sequence
          Length = 147708

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 281    ctcacagcctctgagtctccct 302
              ||||||||||||||||||||||
Sbjct: 131563 ctcacagcctctgagtctccct 131542
to top
>gb|AF115966.1| Homo sapiens protein kinase inhibitor gamma mRNA, complete cds
          Length = 1185

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 281 ctcacagcctctgagtctccct 302
           ||||||||||||||||||||||
Sbjct: 354 ctcacagcctctgagtctccct 333
to top
>emb|CR623057.1| full-length cDNA clone CS0DI056YO14 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1124

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 281 ctcacagcctctgagtctccct 302
           ||||||||||||||||||||||
Sbjct: 324 ctcacagcctctgagtctccct 303
to top
>gb|AF182032.1|AF182032 Homo sapiens protein kinase inhibitor gamma (PKIG) mRNA, complete
           cds
          Length = 1073

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 281 ctcacagcctctgagtctccct 302
           ||||||||||||||||||||||
Sbjct: 246 ctcacagcctctgagtctccct 225
to top
>dbj|AB019517.1| Homo sapiens PKIG mRNA for protein kinase inhibitor gamma, complete
           cds
          Length = 923

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 281 ctcacagcctctgagtctccct 302
           ||||||||||||||||||||||
Sbjct: 105 ctcacagcctctgagtctccct 84
to top
>ref|XM_630607.1| Dictyostelium discoideum hypothetical protein (DDB0189002), partial
           mRNA
          Length = 2436

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  taacatttggtaaaattaaat 103
           |||||||||||||||||||||
Sbjct: 134 taacatttggtaaaattaaat 154
to top
>gb|AF489515.1| Streptomyces thermovulgaris malate synthase (aceB) gene, complete cds
          Length = 1626

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 435  cggccttcatcacctcccgccggaa 459
            ||||||||||| |||||||||||||
Sbjct: 1007 cggccttcatcccctcccgccggaa 1031
to top
>gb|AC124391.3| Mus musculus BAC clone RP24-439L13 from chromosome 18, complete
             sequence
          Length = 153492

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 375   gaatcttcttgtccttggtgt 395
             |||||||||||||||||||||
Sbjct: 48258 gaatcttcttgtccttggtgt 48238
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 487     gttctcgtccaccacgatctg 507
               |||||||||||||||||||||
Sbjct: 5144835 gttctcgtccaccacgatctg 5144815
to top
>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 418     gatctcctggagcaggccggccttc 442
               ||||||||||||||||| |||||||
Sbjct: 2410730 gatctcctggagcaggcgggccttc 2410754
to top
>gb|AC093529.2| Homo sapiens chromosome 5 clone RP11-29K14, complete sequence
          Length = 109306

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 31    aaaagtaagtaaaaaatagaa 51
             |||||||||||||||||||||
Sbjct: 13239 aaaagtaagtaaaaaatagaa 13259
to top
>gb|AC094109.2| Homo sapiens chromosome 5 clone RP11-62E10, complete sequence
          Length = 160039

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 31     aaaagtaagtaaaaaatagaa 51
              |||||||||||||||||||||
Sbjct: 107769 aaaagtaagtaaaaaatagaa 107789
to top
>gb|AC068323.8|AC068323 Homo sapiens chromosome 5 clone RP11-62E10, complete sequence
          Length = 160039

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 31    aaaagtaagtaaaaaatagaa 51
             |||||||||||||||||||||
Sbjct: 52271 aaaagtaagtaaaaaatagaa 52251
to top
>emb|AM181475.1| Microbacterium aerolatum partial gyrB gene for DNA gyrase subunit
           B, type strain DSM 14217
          Length = 1101

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 347 ttgcggcggccggcctcgcgggccttgcg 375
           ||||||||| ||| |||||||||||||||
Sbjct: 840 ttgcggcgggcggtctcgcgggccttgcg 812
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 397    ctcgtgccggcggcggcgcttgatc 421
              ||||||||||||||||||| |||||
Sbjct: 699285 ctcgtgccggcggcggcgcatgatc 699261
to top
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
             sequence
          Length = 1019846

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   attgaagtggaaagagcgac 129
             ||||||||||||||||||||
Sbjct: 80226 attgaagtggaaagagcgac 80207
to top
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0080I08, complete sequence
          Length = 197156

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   gcggcggccggcctcgcggg 368
             ||||||||||||||||||||
Sbjct: 80719 gcggcggccggcctcgcggg 80700
to top
>gb|AY242833.1| Bosea minatitlanensis strain AMX51 RNA polymerase beta subunit (rpoB)
            gene, complete cds
          Length = 4122

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 421  ctcctggagcaggccggcct 440
            ||||||||||||||||||||
Sbjct: 3643 ctcctggagcaggccggcct 3662
to top
>ref|XM_367034.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG03110.4) partial mRNA
          Length = 918

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 490 ctcgtccaccacgatctgcacgtt 513
           ||||||||| ||||||||||||||
Sbjct: 513 ctcgtccacgacgatctgcacgtt 490
to top
>ref|XM_567595.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNK00250) partial mRNA
          Length = 5022

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 110  attgaagtggaaagagcgac 129
            ||||||||||||||||||||
Sbjct: 2398 attgaagtggaaagagcgac 2417
to top
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 427     gagcaggccggccttcatca 446
               ||||||||||||||||||||
Sbjct: 1921245 gagcaggccggccttcatca 1921226
to top
>emb|AL450428.6| Human DNA sequence from clone RP11-264J11 on chromosome 9, complete
             sequence
          Length = 84808

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   ccatgcaggcaaaagaaaag 170
             ||||||||||||||||||||
Sbjct: 63541 ccatgcaggcaaaagaaaag 63522
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 334     acgcctgcggcggttgcggcggcc 357
               ||||| ||||||||||||||||||
Sbjct: 2304586 acgccggcggcggttgcggcggcc 2304609
to top
>emb|AL139192.8| Human DNA sequence from clone RP11-515I23 on chromosome Xq13.2-21.2
             Contains the 5' end of a novel gene, complete sequence
          Length = 94056

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    acatttggtaaaattaaata 104
             ||||||||||||||||||||
Sbjct: 68464 acatttggtaaaattaaata 68483
to top
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 352    gcggccggcctcgcgggcct 371
              ||||||||||||||||||||
Sbjct: 175641 gcggccggcctcgcgggcct 175622
to top
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 352   gcggccggcctcgcgggcct 371
             ||||||||||||||||||||
Sbjct: 87634 gcggccggcctcgcgggcct 87615
to top
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 352  gcggccggcctcgcgggcct 371
            ||||||||||||||||||||
Sbjct: 9183 gcggccggcctcgcgggcct 9164
to top
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   tgcggcggccggcctcgcgg 367
             ||||||||||||||||||||
Sbjct: 90561 tgcggcggccggcctcgcgg 90580
to top
>emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluster for biosynthesis of
            glycopeptide antibiotic A40926, strain ATCC 39727
          Length = 89153

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 345  ggttgcggcggccggcctcgcggg 368
            |||||||||||||| |||||||||
Sbjct: 1501 ggttgcggcggccgacctcgcggg 1524
to top
>gb|AC020906.6| Homo sapiens chromosome 19 clone CTB-83J15, complete sequence
          Length = 110184

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 600   gagccaggggaagctggagc 619
             ||||||||||||||||||||
Sbjct: 55364 gagccaggggaagctggagc 55345
to top
>gb|AC120781.23| Pan troglodytes clone rp43-28m17, complete sequence
          Length = 184706

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 593   gagaacggagccaggggaagctgg 616
             |||||||||||| |||||||||||
Sbjct: 61557 gagaacggagcctggggaagctgg 61580
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 349      gcggcggccggcctcgcggg 368
                ||||||||||||||||||||
Sbjct: 18814829 gcggcggccggcctcgcggg 18814810
to top
>gb|AY011374.1| Manis pentadactyla amyloid beta precursor protein (APP) gene,
           partial cds
          Length = 636

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 38  agtaaaaaatagaacagaag 57
           ||||||||||||||||||||
Sbjct: 154 agtaaaaaatagaacagaag 135
to top
>emb|BX088527.5| Zebrafish DNA sequence from clone DKEY-200F8 in linkage group 1,
             complete sequence
          Length = 148904

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   atgcaggcaaaagaaaaggt 172
             ||||||||||||||||||||
Sbjct: 22298 atgcaggcaaaagaaaaggt 22317
to top
>emb|BX005073.7| Zebrafish DNA sequence from clone CH211-129N18, complete sequence
          Length = 185849

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    ttgaagtggaaagagcgact 130
              ||||||||||||||||||||
Sbjct: 103340 ttgaagtggaaagagcgact 103321
to top
>dbj|AK069995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037B09, full
            insert sequence
          Length = 1917

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 349  gcggcggccggcctcgcggg 368
            ||||||||||||||||||||
Sbjct: 1521 gcggcggccggcctcgcggg 1540
to top
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 38      agtaaaaaatagaacagaagtatc 61
               |||||||||||||| |||||||||
Sbjct: 3593382 agtaaaaaatagaatagaagtatc 3593359
to top
>emb|AL929374.7| Zebrafish DNA sequence from clone CH211-89M7 in linkage group 5,
             complete sequence
          Length = 179521

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   atgcaggcaaaagaaaaggt 172
             ||||||||||||||||||||
Sbjct: 54472 atgcaggcaaaagaaaaggt 54491
to top
>emb|AL021447.3|CEF19B2 Caenorhabditis elegans Cosmid F19B2, complete sequence
          Length = 38950

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   atgcaggcaaaagaaaaggt 172
             ||||||||||||||||||||
Sbjct: 12815 atgcaggcaaaagaaaaggt 12796
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 349      gcggcggccggcctcgcggg 368
                ||||||||||||||||||||
Sbjct: 18975525 gcggcggccggcctcgcggg 18975506
to top
>gb|AC122183.4| Mus musculus BAC clone RP23-14P23 from 3, complete sequence
          Length = 210223

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 28    tagaaaagtaagtaaaaaatagaa 51
             ||||||||||||||||||| ||||
Sbjct: 74894 tagaaaagtaagtaaaaaaaagaa 74917
to top
>gb|U90027.1|SSU90027 Staphylococcus simulans 16S-23S ribosomal RNA spacer region
          Length = 242

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 27  ctagaaaagtaagtaaaaaataga 50
           ||||| ||||||||||||||||||
Sbjct: 110 ctagataagtaagtaaaaaataga 133
to top
>gb|U90026.1|SSU90026 Staphylococcus simulans 16S-23S ribosomal RNA spacer region
          Length = 242

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 27  ctagaaaagtaagtaaaaaataga 50
           ||||| ||||||||||||||||||
Sbjct: 110 ctagataagtaagtaaaaaataga 133
to top
>gb|U90025.1|SSU90025 Staphylococcus simulans 16S-23S ribosomal RNA spacer region
          Length = 241

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 27  ctagaaaagtaagtaaaaaataga 50
           ||||| ||||||||||||||||||
Sbjct: 109 ctagataagtaagtaaaaaataga 132
to top
>gb|U90023.1|SSU90023 Staphylococcus simulans 16S-23S ribosomal RNA spacer region
          Length = 241

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 27  ctagaaaagtaagtaaaaaataga 50
           ||||| ||||||||||||||||||
Sbjct: 109 ctagataagtaagtaaaaaataga 132
to top
>gb|U90022.1|SSU90022 Staphylococcus simulans 16S-23S ribosomal RNA spacer region
          Length = 242

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 27  ctagaaaagtaagtaaaaaataga 50
           ||||| ||||||||||||||||||
Sbjct: 110 ctagataagtaagtaaaaaataga 133
to top
>gb|U39814.1|SSU39814 Staphylococcus simulans 16S-23S ribosomal RNA spacer region
          Length = 333

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 27  ctagaaaagtaagtaaaaaataga 50
           ||||| ||||||||||||||||||
Sbjct: 201 ctagataagtaagtaaaaaataga 224
to top
>gb|U39813.1|SSU39813 Staphylococcus simulans 16S-23S ribosomal RNA spacer region
          Length = 241

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 27  ctagaaaagtaagtaaaaaataga 50
           ||||| ||||||||||||||||||
Sbjct: 109 ctagataagtaagtaaaaaataga 132
to top
>emb|AL606487.15| Mouse DNA sequence from clone RP23-342L24 on chromosome 11, complete
              sequence
          Length = 136540

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    ggcgcttgatctcctggagc 430
              ||||||||||||||||||||
Sbjct: 119510 ggcgcttgatctcctggagc 119529


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,859,531
Number of Sequences: 3902068
Number of extensions: 5859531
Number of successful extensions: 122402
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121569
Number of HSP's gapped (non-prelim): 829
length of query: 630
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 607
effective length of database: 17,143,297,704
effective search space: 10405981706328
effective search space used: 10405981706328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top