ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal35m07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1001 bits (505), Expect = 0.0 Identities = 532/537 (99%), Gaps = 3/537 (0%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaacta-gataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || ||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 49914 tgcataaactaaaccaacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 49973 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49974 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 50033 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50034 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 50093 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50094 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 50153 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50154 taaaagtcctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 50213 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacataatgtactcccattaatgtggaatagg 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50214 ccaaaaaatatcatattcgtgaagcagaaacataatgtactcccattaatgtggaatagg 50273 Query: 365 cggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctcttt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50274 cggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctcttt 50333 Query: 425 tcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgttt 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50334 tcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgttt 50393 Query: 485 cctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50394 cctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 50450
>gb|J04954.1|WHTCPPSBG Triticum aestivum chloroplast NADPH-plastoquinone oxireductase (psbG) and thylakoid membrane protein (ndhC) genes, complete cds Length = 1492 Score = 1001 bits (505), Expect = 0.0 Identities = 532/537 (99%), Gaps = 3/537 (0%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaacta-gataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || ||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 577 tgcataaactaaaccaacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 518 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 517 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 458 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 398 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 338 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 taaaagtcctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 278 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacataatgtactcccattaatgtggaatagg 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 ccaaaaaatatcatattcgtgaagcagaaacataatgtactcccattaatgtggaatagg 218 Query: 365 cggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctcttt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 cggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctcttt 158 Query: 425 tcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgttt 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 tcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgttt 98 Query: 485 cctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 cctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 41
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 741 bits (374), Expect = 0.0 Identities = 502/538 (93%), Gaps = 5/538 (0%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 49271 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 49330 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 49331 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 49390 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 49391 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 49450 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 49451 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 49510 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 49511 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 49570 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 49571 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 49630 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 49631 gcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctctt 49689 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgtt 483 ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||||| Sbjct: 49690 ttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgtt 49749 Query: 484 tcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 |||||| ||| | ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 49750 tcctctttgccacgtcttctttaaagattcatccaatggaatcccgactccctttctt 49807
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 741 bits (374), Expect = 0.0 Identities = 502/538 (93%), Gaps = 5/538 (0%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 11285485 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 11285544 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 11285545 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 11285604 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 11285605 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 11285664 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 11285665 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 11285724 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 11285725 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 11285784 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 11285785 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 11285844 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 11285845 gcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctctt 11285903 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgtt 483 ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||||| Sbjct: 11285904 ttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgtt 11285963 Query: 484 tcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 |||||| ||| | ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 11285964 tcctctttgccacgtcttctttaaagattcatccaatggaatcccgactccctttctt 11286021 Score = 704 bits (355), Expect = 0.0 Identities = 500/539 (92%), Gaps = 7/539 (1%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 5608361 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 5608420 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 5608421 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 5608480 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 5608481 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagcccc-cc 5608539 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 5608540 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 5608599 Query: 245 taaaagccctgaaatcgaaaatgc-caaaataggaataaggcttgctattattagaaatg 303 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 5608600 taaaagtgctgaaatccaaaatgctaaaaataggaataaggcttgctattattagaaatg 5608659 Query: 304 tccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaata 362 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 5608660 cccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaata 5608719 Query: 363 ggcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctct 422 |||||||| | ||||||||||||||| |||||||||||||||| | ||||| |||||| | Sbjct: 5608720 ggcggaac-tgaattagtcaattcaagtcagcattgtcaatttttacagaatttctcttt 5608778 Query: 423 tttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgt 482 |||||||||||||||||| ||| |||| |||||| |||| |||||||||||||||||| Sbjct: 5608779 tttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgt 5608838 Query: 483 ttcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 ||||||| ||| | ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5608839 ttcctctttgccacgtcttctttaaagattcatccaatggaatcccgactccctttctt 5608897 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 374 aattagtcaattcaattcagcattgtcaatttatccagaacttctctcttttc 426 ||||| ||||||||| ||| || ||||||||||| || || |||| ||||||| Sbjct: 7761368 aattaatcaattcaagtcaacactgtcaatttatacataagttctatcttttc 7761316
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 741 bits (374), Expect = 0.0 Identities = 502/538 (93%), Gaps = 5/538 (0%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 11285156 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 11285215 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 11285216 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 11285275 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 11285276 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 11285335 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 11285336 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 11285395 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 11285396 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 11285455 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 11285456 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 11285515 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 11285516 gcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctctt 11285574 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgtt 483 ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||||| Sbjct: 11285575 ttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgtt 11285634 Query: 484 tcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 |||||| ||| | ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 11285635 tcctctttgccacgtcttctttaaagattcatccaatggaatcccgactccctttctt 11285692 Score = 704 bits (355), Expect = 0.0 Identities = 500/539 (92%), Gaps = 7/539 (1%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 5608350 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 5608409 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 5608410 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 5608469 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 5608470 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagcccc-cc 5608528 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 5608529 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 5608588 Query: 245 taaaagccctgaaatcgaaaatgc-caaaataggaataaggcttgctattattagaaatg 303 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 5608589 taaaagtgctgaaatccaaaatgctaaaaataggaataaggcttgctattattagaaatg 5608648 Query: 304 tccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaata 362 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 5608649 cccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaata 5608708 Query: 363 ggcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctct 422 |||||||| | ||||||||||||||| |||||||||||||||| | ||||| |||||| | Sbjct: 5608709 ggcggaac-tgaattagtcaattcaagtcagcattgtcaatttttacagaatttctcttt 5608767 Query: 423 tttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgt 482 |||||||||||||||||| ||| |||| |||||| |||| |||||||||||||||||| Sbjct: 5608768 tttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgt 5608827 Query: 483 ttcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 ||||||| ||| | ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5608828 ttcctctttgccacgtcttctttaaagattcatccaatggaatcccgactccctttctt 5608886 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 374 aattagtcaattcaattcagcattgtcaatttatccagaacttctctcttttc 426 ||||| ||||||||| ||| || ||||||||||| || || |||| ||||||| Sbjct: 7761249 aattaatcaattcaagtcaacactgtcaatttatacataagttctatcttttc 7761197
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 741 bits (374), Expect = 0.0 Identities = 502/538 (93%), Gaps = 5/538 (0%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 86569 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 86510 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 86509 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 86450 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 86449 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 86390 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 86389 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 86330 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 86329 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 86270 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 86269 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 86210 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 86209 gcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctctt 86151 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgtt 483 ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||||| Sbjct: 86150 ttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgtt 86091 Query: 484 tcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 |||||| ||| | ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 86090 tcctctttgccacgtcttctttaaagattcatccaatggaatcccgactccctttctt 86033
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 741 bits (374), Expect = 0.0 Identities = 502/538 (93%), Gaps = 5/538 (0%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 49250 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 49309 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 49310 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 49369 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 49370 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 49429 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 49430 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 49489 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 49490 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 49549 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 49550 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 49609 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 49610 gcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctctt 49668 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgtt 483 ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||||| Sbjct: 49669 ttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgtt 49728 Query: 484 tcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 |||||| ||| | ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 49729 tcctctttgccacgtcttctttaaagattcatccaatggaatcccgactccctttctt 49786
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 733 bits (370), Expect = 0.0 Identities = 501/538 (93%), Gaps = 5/538 (0%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 49323 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 49382 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 49383 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 49442 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 49443 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 49502 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 49503 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 49562 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 49563 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 49622 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 49623 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 49682 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 49683 gcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctctt 49741 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgtt 483 ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||||| Sbjct: 49742 ttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgtt 49801 Query: 484 tcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 |||||| ||| | ||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 49802 tcctctttgccacgtcttctttaaagattcatccaatggaatcccgaccccctttctt 49859
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 733 bits (370), Expect = 0.0 Identities = 501/538 (93%), Gaps = 5/538 (0%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 49323 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 49382 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 49383 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 49442 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 49443 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 49502 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 49503 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 49562 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 49563 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 49622 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 49623 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 49682 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 49683 gcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctctt 49741 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgtt 483 ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||||| Sbjct: 49742 ttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgtt 49801 Query: 484 tcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 |||||| ||| | ||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 49802 tcctctttgccacgtcttctttaaagattcatccaatggaatcccgaccccctttctt 49859
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 733 bits (370), Expect = 0.0 Identities = 502/538 (93%), Gaps = 6/538 (1%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 47526 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 47585 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 47586 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 47645 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 47646 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagcccc-cc 47704 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 47705 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 47764 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 47765 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 47824 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 47825 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 47884 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 47885 gcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctctt 47943 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgtt 483 ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||||| Sbjct: 47944 ttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgtt 48003 Query: 484 tcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 |||||| ||| | ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 48004 tcctctttgccacgtcttctttaaagattcatccaatggaatcccgactccctttctt 48061
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 733 bits (370), Expect = 0.0 Identities = 502/538 (93%), Gaps = 6/538 (1%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 122459 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 122518 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 122519 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 122578 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 122579 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagcccc-cc 122637 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 122638 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 122697 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122698 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 122757 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 122758 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 122817 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 122818 gcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctctt 122876 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgtt 483 ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||||| Sbjct: 122877 ttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgtt 122936 Query: 484 tcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 |||||| ||| | ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 122937 tcctctttgccacgtcttctttaaagattcatccaatggaatcccgactccctttctt 122994
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 733 bits (370), Expect = 0.0 Identities = 501/538 (93%), Gaps = 5/538 (0%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 19945279 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 19945220 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 19945219 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 19945160 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 19945159 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 19945100 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 19945099 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 19945040 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 19945039 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 19944980 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 19944979 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 19944920 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 19944919 gcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctctt 19944861 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgtt 483 ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||||| Sbjct: 19944860 ttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgtt 19944801 Query: 484 tcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 |||||| ||| | ||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 19944800 tcctctttgccacgtcttctttaaagattcatccaatggaatcccgaccccctttctt 19944743 Score = 733 bits (370), Expect = 0.0 Identities = 502/538 (93%), Gaps = 6/538 (1%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 10341134 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 10341193 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 10341194 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 10341253 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 10341254 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagcccc-cc 10341312 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 10341313 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 10341372 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10341373 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 10341432 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10341433 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 10341492 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 10341493 gcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctctt 10341551 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgtt 483 ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||||| Sbjct: 10341552 ttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgtt 10341611 Query: 484 tcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 |||||| ||| | ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10341612 tcctctttgccacgtcttctttaaagattcatccaatggaatcccgactccctttctt 10341669
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 733 bits (370), Expect = 0.0 Identities = 501/538 (93%), Gaps = 5/538 (0%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 40764 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 40823 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 40824 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 40883 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 40884 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 40943 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 40944 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 41003 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 41004 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 41063 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 41064 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 41123 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 41124 gcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctctt 41182 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgtt 483 ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||||| Sbjct: 41183 ttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgtt 41242 Query: 484 tcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 |||||| ||| | ||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 41243 tcctctttgccacgtcttctttaaagattcatccaatggaatcccgaccccctttctt 41300
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 733 bits (370), Expect = 0.0 Identities = 501/538 (93%), Gaps = 5/538 (0%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 19956555 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 19956496 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 19956495 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 19956436 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 19956435 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 19956376 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 19956375 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 19956316 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 19956315 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 19956256 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 19956255 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 19956196 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 19956195 gcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctctt 19956137 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgtt 483 ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||||| Sbjct: 19956136 ttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgtt 19956077 Query: 484 tcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 |||||| ||| | ||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 19956076 tcctctttgccacgtcttctttaaagattcatccaatggaatcccgaccccctttctt 19956019 Score = 733 bits (370), Expect = 0.0 Identities = 502/538 (93%), Gaps = 6/538 (1%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 10347173 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 10347232 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 10347233 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 10347292 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 10347293 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagcccc-cc 10347351 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 10347352 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 10347411 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10347412 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 10347471 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10347472 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 10347531 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 10347532 gcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctctt 10347590 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgtt 483 ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||||| Sbjct: 10347591 ttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgtt 10347650 Query: 484 tcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 |||||| ||| | ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10347651 tcctctttgccacgtcttctttaaagattcatccaatggaatcccgactccctttctt 10347708
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 726 bits (366), Expect = 0.0 Identities = 501/538 (93%), Gaps = 6/538 (1%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 49330 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 49389 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 49390 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 49449 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 49450 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 49509 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 49510 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 49569 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 49570 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 49629 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 49630 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 49689 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||||| Sbjct: 49690 gcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctctt 49748 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgtt 483 ||||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||||| Sbjct: 49749 ttcctcggtgaaacaaggatcggtttttctcaaaccaaag-gcttagtttagcctttgtt 49807 Query: 484 tcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 |||||| ||| | ||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 49808 tcctctttgccacgtcttctttaaagattcatccaatggaatcccgaccccctttctt 49865
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 704 bits (355), Expect = 0.0 Identities = 500/539 (92%), Gaps = 7/539 (1%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 44524 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 44465 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 44464 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 44405 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 44404 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagcccc-cc 44346 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 44345 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 44286 Query: 245 taaaagccctgaaatcgaaaatgc-caaaataggaataaggcttgctattattagaaatg 303 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 44285 taaaagtgctgaaatccaaaatgctaaaaataggaataaggcttgctattattagaaatg 44226 Query: 304 tccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaata 362 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 44225 cccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaata 44166 Query: 363 ggcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctct 422 |||||||| | ||||||||||||||| |||||||||||||||| | ||||| |||||| | Sbjct: 44165 ggcggaac-tgaattagtcaattcaagtcagcattgtcaatttttacagaatttctcttt 44107 Query: 423 tttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcctttgt 482 |||||||||||||||||| ||| |||| |||||| |||| |||||||||||||||||| Sbjct: 44106 tttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcctttgt 44047 Query: 483 ttcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctttctt 541 ||||||| ||| | ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 44046 ttcctctttgccacgtcttctttaaagattcatccaatggaatcccgactccctttctt 43988
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 690 bits (348), Expect = 0.0 Identities = 491/533 (92%), Gaps = 13/533 (2%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 114039 tgcataaactaaaccaacaactaggataagcacaaaaatgaaagcttcgataaaaacgga 114098 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 114099 tacacccaatacgtcgaaactcattgcccaagggtagagaaagactgtttccacatcaaa 114158 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 114159 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 114218 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114219 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 114278 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 114279 taaaagtcctgaaatccaaaataccaaaataggaataaggcttgctattattagaaatgt 114338 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 114339 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 114398 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 114399 gcggaac-tgaattagtcaattcaagttgacattgtcaatttatccagaacttctctctt 114457 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaa--------agcgcttagtttag 475 |||||||||||||||||||||| ||||| |||||| || |||||||| ||||| Sbjct: 114458 ttcctcggtgaaacaagaatctgttttgctcaaaccaaaggcaaggagcgcttactttag 114517 Query: 476 cctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccc 528 |||||||||| | |||| | ||||| |||| ||||||||||||| |||||| Sbjct: 114518 cctttgtttcttttgtgatatgtcttccttaaggattcatccaatgtaatccc 114570
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 690 bits (348), Expect = 0.0 Identities = 491/533 (92%), Gaps = 13/533 (2%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 52412 tgcataaactaaaccaacaactaggataagcacaaaaatgaaagcttcgataaaaacgga 52471 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 52472 tacacccaatacgtcgaaactcattgcccaagggtagagaaagactgtttccacatcaaa 52531 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 52532 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 52591 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52592 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 52651 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 52652 taaaagtcctgaaatccaaaataccaaaataggaataaggcttgctattattagaaatgt 52711 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 52712 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 52771 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 52772 gcggaac-tgaattagtcaattcaagttgacattgtcaatttatccagaacttctctctt 52830 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaa--------agcgcttagtttag 475 |||||||||||||||||||||| ||||| |||||| || |||||||| ||||| Sbjct: 52831 ttcctcggtgaaacaagaatctgttttgctcaaaccaaaggcaaggagcgcttactttag 52890 Query: 476 cctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatccc 528 |||||||||| | |||| | ||||| |||| ||||||||||||| |||||| Sbjct: 52891 cctttgtttcttttgtgatatgtcttccttaaggattcatccaatgtaatccc 52943
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 684 bits (345), Expect = 0.0 Identities = 500/546 (91%), Gaps = 13/546 (2%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 51885 tgcataaactaaaccaacaactaggataagcacaaaaatgaaagcttcgataaaaacgga 51944 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 51945 tacacccaatacgtcgaaactcattgcccaagggtagagaaagactgtttccacatcaaa 52004 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 52005 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 52064 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52065 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 52124 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 52125 taaaagtcctgaaatccaaaataccaaaataggaataaggcttgctattattagaaatgt 52184 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 52185 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 52244 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 52245 gcggaac-tgaattagtcaattcaagttgacattgtcaatttatccagaacttctctctt 52303 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaa--------agcgcttagtttag 475 |||||||||||||||||||||| ||||| |||||| || |||||||| ||||| Sbjct: 52304 ttcctcggtgaaacaagaatctgttttgctcaaaccaaaggcaaggagcgcttactttag 52363 Query: 476 cctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccc 535 ||||| |||| | |||| | ||||| |||| ||||||||||||| |||||| ||| || Sbjct: 52364 cctttatttcttttgtgatatgtcttccttaaggattcatccaatgtaatccccacttcc 52423 Query: 536 tttctt 541 ||||| Sbjct: 52424 cttctt 52429
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 684 bits (345), Expect = 0.0 Identities = 500/546 (91%), Gaps = 13/546 (2%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 51874 tgcataaactaaaccaacaactaggataagcacaaaaatgaaagcttcgataaaaacgga 51933 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 51934 tacacccaatacgtcgaaactcattgcccaagggtagagaaagactgtttccacatcaaa 51993 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 51994 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 52053 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52054 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 52113 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 52114 taaaagtcctgaaatccaaaataccaaaataggaataaggcttgctattattagaaatgt 52173 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 52174 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 52233 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 52234 gcggaac-tgaattagtcaattcaagttgacattgtcaatttatccagaacttctctctt 52292 Query: 424 ttcctcggtgaaacaagaatcttttttgttcaaacaaa--------agcgcttagtttag 475 |||||||||||||||||||||| ||||| |||||| || |||||||| ||||| Sbjct: 52293 ttcctcggtgaaacaagaatctgttttgctcaaaccaaaggcaaggagcgcttactttag 52352 Query: 476 cctttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccc 535 ||||| |||| | |||| | ||||| |||| ||||||||||||| |||||| ||| || Sbjct: 52353 cctttatttcttttgtgatatgtcttccttaaggattcatccaatgtaatccccacttcc 52412 Query: 536 tttctt 541 ||||| Sbjct: 52413 cttctt 52418
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 682 bits (344), Expect = 0.0 Identities = 500/544 (91%), Gaps = 11/544 (2%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 12589461 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 12589402 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 12589401 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 12589342 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcc----c 180 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 12589341 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagcctcctc 12589282 Query: 181 ctcccatgggttctatacccgattcataactagaaagcttctctggtccttcactaaccg 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 12589281 cccccatgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccg 12589222 Query: 241 gggctaaaagccctgaaatcgaaaatgc--caaaataggaataaggcttgctattattag 298 | |||||||| |||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 12589221 gagctaaaagtgctgaaatccaaaatgctaaaaaataggaataaggcttgctattattag 12589162 Query: 299 aaatgtccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtg 357 ||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 12589161 aaatgcccaaaaaatatcatattcatgaagcagaaacataaatgtactcccattaatgtg 12589102 Query: 358 gaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttc 417 ||||||||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||| Sbjct: 12589101 gaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttc 12589043 Query: 418 tctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcc 477 ||||||||||||||||||||||| ||| |||| |||||| |||| ||||||||||||| Sbjct: 12589042 tctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcc 12588983 Query: 478 tttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctt 537 |||||||||||| ||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 12588982 tttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcctgactccctt 12588923 Query: 538 tctt 541 |||| Sbjct: 12588922 tctt 12588919
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652D10 Length = 156744 Score = 682 bits (344), Expect = 0.0 Identities = 500/544 (91%), Gaps = 11/544 (2%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 71774 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 71715 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 71714 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 71655 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcc----c 180 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 71654 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagcctcctc 71595 Query: 181 ctcccatgggttctatacccgattcataactagaaagcttctctggtccttcactaaccg 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 71594 cccccatgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccg 71535 Query: 241 gggctaaaagccctgaaatcgaaaatgc--caaaataggaataaggcttgctattattag 298 | |||||||| |||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 71534 gagctaaaagtgctgaaatccaaaatgctaaaaaataggaataaggcttgctattattag 71475 Query: 299 aaatgtccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtg 357 ||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 71474 aaatgcccaaaaaatatcatattcatgaagcagaaacataaatgtactcccattaatgtg 71415 Query: 358 gaataggcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttc 417 ||||||||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||| Sbjct: 71414 gaataggcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttc 71356 Query: 418 tctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcc 477 ||||||||||||||||||||||| ||| |||| |||||| |||| ||||||||||||| Sbjct: 71355 tctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcc 71296 Query: 478 tttgtttcctctgtgctgcatcttctttaaagattcatccaatggaatcccaactccctt 537 |||||||||||| ||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 71295 tttgtttcctctttgccacgtcttctttaaagattcatccaatggaatcctgactccctt 71236 Query: 538 tctt 541 |||| Sbjct: 71235 tctt 71232
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 678 bits (342), Expect = 0.0 Identities = 461/498 (92%), Gaps = 2/498 (0%) Strand = Plus / Plus Query: 45 aaagcttcgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtataga 104 |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| Sbjct: 77629 aaagcttcgataaaaacggatatacccaatacgtcgaaactcattgcccaaaggtagaga 77688 Query: 105 aagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcgg 164 ||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 77689 aagaccgtttcgacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcgg 77748 Query: 165 aattgtacccaagcccctcccatgggttctatacccgattcataactagaaagcttctct 224 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 77749 aattgtaaccaagccccccccatgggttctatacccgattcataactagaaagcttctct 77808 Query: 225 ggtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataagg 284 |||||||||| |||||| |||||||| |||||||| ||||||| ||||||| ||||||| Sbjct: 77809 ggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaatagaaataagg 77868 Query: 285 cttgctattattagaaatgtccaaaaaatatcatattcgtgaagcagaaacat-aatgta 343 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 77869 cttgctattattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgta 77928 Query: 344 ctcccattaatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaat 403 ||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| Sbjct: 77929 ctcccattaatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaat 77987 Query: 404 ttatccagaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaag 463 |||| ||||| |||||||||||||| ||||||||||| ||| |||| |||||| |||| Sbjct: 77988 ttatacagaatttctctcttttccttggtgaaacaaggatcggtttttctcaaaccaaag 78047 Query: 464 cgcttagtttagcctttgtttcctctgtgctgcatcttctttaaagattcatccaatgga 523 ||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| || Sbjct: 78048 ggcttagtttagcctttgtttcctctttgccacgtcttctttaaagattcatccaataga 78107 Query: 524 atcccaactccctttctt 541 ||||| |||||||||||| Sbjct: 78108 atcccgactccctttctt 78125
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 678 bits (342), Expect = 0.0 Identities = 461/498 (92%), Gaps = 2/498 (0%) Strand = Plus / Plus Query: 45 aaagcttcgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtataga 104 |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| Sbjct: 23634948 aaagcttcgataaaaacggatatacccaatacgtcgaaactcattgcccaaaggtagaga 23635007 Query: 105 aagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcgg 164 ||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 23635008 aagaccgtttcgacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgtattcgg 23635067 Query: 165 aattgtacccaagcccctcccatgggttctatacccgattcataactagaaagcttctct 224 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 23635068 aattgtaaccaagccccccccatgggttctatacccgattcataactagaaagcttctct 23635127 Query: 225 ggtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataagg 284 |||||||||| |||||| |||||||| |||||||| ||||||| ||||||| ||||||| Sbjct: 23635128 ggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaatagaaataagg 23635187 Query: 285 cttgctattattagaaatgtccaaaaaatatcatattcgtgaagcagaaacat-aatgta 343 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 23635188 cttgctattattagaaatgcccaaaaaatatcatattcgtgaagcagaaacataaatgta 23635247 Query: 344 ctcccattaatgtggaataggcggaacttaaattagtcaattcaattcagcattgtcaat 403 ||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| Sbjct: 23635248 ctcccattaatgtggaataggcggaac-tgaattagtcaattcaagtcagcattgtcaat 23635306 Query: 404 ttatccagaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaag 463 |||| ||||| |||||||||||||| ||||||||||| ||| |||| |||||| |||| Sbjct: 23635307 ttatacagaatttctctcttttccttggtgaaacaaggatcggtttttctcaaaccaaag 23635366 Query: 464 cgcttagtttagcctttgtttcctctgtgctgcatcttctttaaagattcatccaatgga 523 ||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| || Sbjct: 23635367 ggcttagtttagcctttgtttcctctttgccacgtcttctttaaagattcatccaataga 23635426 Query: 524 atcccaactccctttctt 541 ||||| |||||||||||| Sbjct: 23635427 atcccgactccctttctt 23635444 Score = 603 bits (304), Expect = e-169 Identities = 440/476 (92%), Gaps = 7/476 (1%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 14047948 tgcataaactaaaccaacaactaggataagcacaaaaatgaaagcttcgataaaaacgga 14048007 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 14048008 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 14048067 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaag-cccctc 183 |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||| |||| | Sbjct: 14048068 aacaacaaaaactagcgcaaacatgtaatagcgtattcagaattgtaaccaagccccccc 14048127 Query: 184 ccatgggttctatacccgattcataactagaaagcttctctggtccttcactaaccgggg 243 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 14048128 ccatgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggag 14048187 Query: 244 c-taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaat 302 | |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 14048188 cttaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaat 14048247 Query: 303 gtccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaat 361 | ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 14048248 gcccaaaaaatattatattcgtgaagcagaaacataaatgtactcccattaatgtggaat 14048307 Query: 362 aggcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctc 421 ||||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||| Sbjct: 14048308 aggcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctc 14048366 Query: 422 ttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcc 477 ||||||||||||||||||| ||| |||| |||||| |||| ||||||||||||| Sbjct: 14048367 ttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcc 14048422 Score = 599 bits (302), Expect = e-168 Identities = 441/479 (92%), Gaps = 10/479 (2%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 9749010 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 9748951 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 9748950 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 9748891 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaag----ccc 180 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||| Sbjct: 9748890 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 9748831 Query: 181 ctcccatgggttctatacccgattcataactagaaagcttctctggtccttcactaaccg 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9748830 cccccatgggttctatacccgattcataactagaaagcttctctggtccttcacaaaccg 9748771 Query: 241 gggc-taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattaga 299 | || |||||| |||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 9748770 gagcttaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattaga 9748711 Query: 300 aatgtccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtgg 358 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 9748710 aatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtgg 9748651 Query: 359 aataggcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttct 418 ||||| ||||| | ||||||||||||||| |||||||||||||||||| ||||| |||| Sbjct: 9748650 aatagttggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttct 9748592 Query: 419 ctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcc 477 |||||||||||||||||||||| ||| |||| |||||| |||| ||||||||||||| Sbjct: 9748591 ctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcc 9748533
>gb|AY243565.1| Hordeum vulgare chloroplast Ndh complex operon, complete sequence Length = 1778 Score = 636 bits (321), Expect = e-179 Identities = 342/345 (99%), Gaps = 3/345 (0%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaacta-gataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 349 tgcataaactaaaccgacaactaagataagcacgaaaatcaaagcttcgataaaaacgga 290 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 230 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 170 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 110 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 50 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacataatgtactccca 349 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49 ccaaaaaatatcatattcgtgaagcagaaacataatgtactccca 5
>emb|X00408.1|CHHV01 Hordeum vulgare chloroplast genes for ATPase subunits B and E, transfer RNA2-Met and transfer RNA1-Val Length = 3819 Score = 624 bits (315), Expect = e-176 Identities = 324/327 (99%) Strand = Plus / Minus Query: 215 aagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaat 274 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 3819 aagcttctctggtccttcactaaccggggctaaaatgcctgaaatcgaaaatgccaaaat 3760 Query: 275 aggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaagcagaaa 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3759 aggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaagcagaaa 3700 Query: 335 cataatgtactcccattaatgtggaataggcggaacttaaattagtcaattcaattcagc 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3699 cataatgtactcccattaatgtggaataggcggaacttaaattagtcaattcaattcagc 3640 Query: 395 attgtcaatttatccagaacttctctcttttcctcggtgaaacaagaatcttttttgttc 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3639 attgtcaatttatccagaacttctctcttttcctcggtgaaacaagaatcttttttgttc 3580 Query: 455 aaacaaaagcgcttagtttagcctttgtttcctctgtgctgcatcttctttaaagattca 514 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 3579 aaacaaaagcgcttagtttagcctttgtttcctctgtgctgcatcttctttaaagcttca 3520 Query: 515 tccaatggaatcccaactccctttctt 541 ||||||||||||||||||||||||||| Sbjct: 3519 tccaatggaatcccaactccctttctt 3493
>emb|X17438.1|CHZMNPOO Maize chloroplast ndhC, psbG genes for NDH-C, PSII-G and ORF159 Length = 1933 Score = 620 bits (313), Expect = e-174 Identities = 398/420 (94%), Gaps = 5/420 (1%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 419 tgcataaactaaaccaacaactaggataagcacaaaaatgaaagcttcgataaaaacgga 360 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 359 tacacccaatacgtcgaaactcattgcccaagggtagagaaagactgtttccacatcaaa 300 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 299 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 240 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 catgggttctatacccgantcataactagaaagcttctctggtccttcactaaccggggc 180 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 179 taaaagtcctgaaatccaaaataccaaaataggaataaggcttgctattattagaaatgt 120 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaatag 363 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 119 ccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtggaatag 60 Query: 364 gcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctctt 423 ||||||| | ||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 59 gcggaac-tgaattagtcaattcaagttgacattgtcaatttatccagaacttctctctt 1
>emb|AL731596.3|OSJN00236 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0024J22, complete sequence Length = 174430 Score = 603 bits (304), Expect = e-169 Identities = 440/476 (92%), Gaps = 7/476 (1%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 161828 tgcataaactaaaccaacaactaggataagcacaaaaatgaaagcttcgataaaaacgga 161887 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 161888 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 161947 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaag-cccctc 183 |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||| |||| | Sbjct: 161948 aacaacaaaaactagcgcaaacatgtaatagcgtattcagaattgtaaccaagccccccc 162007 Query: 184 ccatgggttctatacccgattcataactagaaagcttctctggtccttcactaaccgggg 243 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 162008 ccatgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggag 162067 Query: 244 c-taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaat 302 | |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 162068 cttaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaat 162127 Query: 303 gtccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaat 361 | ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 162128 gcccaaaaaatattatattcgtgaagcagaaacataaatgtactcccattaatgtggaat 162187 Query: 362 aggcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctc 421 ||||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||| Sbjct: 162188 aggcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctc 162246 Query: 422 ttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcc 477 ||||||||||||||||||| ||| |||| |||||| |||| ||||||||||||| Sbjct: 162247 ttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcc 162302
>emb|AL662942.4|OSJN00135 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033H08, complete sequence Length = 141899 Score = 603 bits (304), Expect = e-169 Identities = 440/476 (92%), Gaps = 7/476 (1%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 124944 tgcataaactaaaccaacaactaggataagcacaaaaatgaaagcttcgataaaaacgga 124885 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 124884 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 124825 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaag-cccctc 183 |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||| |||| | Sbjct: 124824 aacaacaaaaactagcgcaaacatgtaatagcgtattcagaattgtaaccaagccccccc 124765 Query: 184 ccatgggttctatacccgattcataactagaaagcttctctggtccttcactaaccgggg 243 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 124764 ccatgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggag 124705 Query: 244 c-taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaat 302 | |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 124704 cttaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaat 124645 Query: 303 gtccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaat 361 | ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 124644 gcccaaaaaatattatattcgtgaagcagaaacataaatgtactcccattaatgtggaat 124585 Query: 362 aggcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctc 421 ||||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||| Sbjct: 124584 aggcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctc 124526 Query: 422 ttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcc 477 ||||||||||||||||||| ||| |||| |||||| |||| ||||||||||||| Sbjct: 124525 ttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcc 124470
>dbj|AK069240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010F18, full insert sequence Length = 3557 Score = 603 bits (304), Expect = e-169 Identities = 440/476 (92%), Gaps = 7/476 (1%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 1793 tgcataaactaaaccaacaactaggataagcacaaaaatgaaagcttcgataaaaacgga 1734 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1733 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 1674 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaag-cccctc 183 |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||| |||| | Sbjct: 1673 aacaacaaaaactagcgcaaacatgtaatagcgtattcagaattgtaaccaagccccccc 1614 Query: 184 ccatgggttctatacccgattcataactagaaagcttctctggtccttcactaaccgggg 243 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 1613 ccatgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggag 1554 Query: 244 c-taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaat 302 | |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1553 cttaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaat 1494 Query: 303 gtccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaat 361 | ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1493 gcccaaaaaatattatattcgtgaagcagaaacataaatgtactcccattaatgtggaat 1434 Query: 362 aggcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttctctc 421 ||||||||| | ||||||||||||||| |||||||||||||||||| ||||| ||||||| Sbjct: 1433 aggcggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttctctc 1375 Query: 422 ttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcc 477 ||||||||||||||||||| ||| |||| |||||| |||| ||||||||||||| Sbjct: 1374 ttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcc 1319
>emb|AL663002.3|OSJN00199 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026I12, complete sequence Length = 128574 Score = 599 bits (302), Expect = e-168 Identities = 441/479 (92%), Gaps = 10/479 (2%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 81216 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 81157 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 81156 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 81097 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaag----ccc 180 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||| Sbjct: 81096 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 81037 Query: 181 ctcccatgggttctatacccgattcataactagaaagcttctctggtccttcactaaccg 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 81036 cccccatgggttctatacccgattcataactagaaagcttctctggtccttcacaaaccg 80977 Query: 241 gggc-taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattaga 299 | || |||||| |||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 80976 gagcttaaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattaga 80917 Query: 300 aatgtccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtgg 358 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 80916 aatgcccaaaaaatatcatattcgtgaagcagaaacataaatgtactcccattaatgtgg 80857 Query: 359 aataggcggaacttaaattagtcaattcaattcagcattgtcaatttatccagaacttct 418 ||||| ||||| | ||||||||||||||| |||||||||||||||||| ||||| |||| Sbjct: 80856 aatagttggaac-tgaattagtcaattcaagtcagcattgtcaatttatacagaatttct 80798 Query: 419 ctcttttcctcggtgaaacaagaatcttttttgttcaaacaaaagcgcttagtttagcc 477 |||||||||||||||||||||| ||| |||| |||||| |||| ||||||||||||| Sbjct: 80797 ctcttttcctcggtgaaacaaggatcggtttttctcaaaccaaagggcttagtttagcc 80739
>ref|NM_197447.1| Oryza sativa (japonica cultivar-group) NADH dehydrogenase ND3 (OSJNBb0005J14.29), mRNA Length = 363 Score = 494 bits (249), Expect = e-136 Identities = 315/333 (94%), Gaps = 3/333 (0%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 333 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 274 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 273 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 214 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 213 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 154 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 153 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 94 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 93 taaaagtgctgaaatccaaaatgctaaaataggaataaggcttgctattattagaaatgc 34 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat 337 ||||||||||||||||||||||||||||||||| Sbjct: 33 ccaaaaaatatcatattcgtgaagcagaaacat 1
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 361 bits (182), Expect = 2e-96 Identities = 233/246 (94%), Gaps = 3/246 (1%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 33553303 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 33553244 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 33553243 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 33553184 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 33553183 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 33553124 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 33553123 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 33553064 Query: 245 taaaag 250 |||||| Sbjct: 33553063 taaaag 33553058 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 tagcgtattcggaattgtacccaagc 178 ||||||||||||||||||| |||||| Sbjct: 33512946 tagcgtattcggaattgtaaccaagc 33512971 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 58 aaacggatacacccaatacgtcgaaactcattgccca 94 ||||||| || |||||||| |||||||||||| |||| Sbjct: 33512872 aaacggaaacgcccaatacatcgaaactcattaccca 33512908 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 58 aaacggatacacccaatacgtcgaaactcattgccca 94 ||||||| || |||||||| |||||||||||| |||| Sbjct: 2523840 aaacggaaacgcccaatacatcgaaactcattaccca 2523876 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 aattagtcaattcaattcagcatt 397 ||||||||||||||| |||||||| Sbjct: 19318135 aattagtcaattcaagtcagcatt 19318158
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 361 bits (182), Expect = 2e-96 Identities = 233/246 (94%), Gaps = 3/246 (1%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| || |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 98500 tgcataaactaaaccaacaactaggataagcacgaaaatgaaagcttcgataaaaacgga 98441 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 98440 tatacccaatacgtcgaaactcattgcccaagggtagagaaagaccgtttccacatcaaa 98381 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 98380 aacaacaaaaactagcgcaaacatgtaatagcgtattcggaattgtaaccaagccccccc 98321 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 98320 catgggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagc 98261 Query: 245 taaaag 250 |||||| Sbjct: 98260 taaaag 98255 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 tagcgtattcggaattgtacccaagc 178 ||||||||||||||||||| |||||| Sbjct: 58143 tagcgtattcggaattgtaaccaagc 58168 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 58 aaacggatacacccaatacgtcgaaactcattgccca 94 ||||||| || |||||||| |||||||||||| |||| Sbjct: 58069 aaacggaaacgcccaatacatcgaaactcattaccca 58105
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 331 bits (167), Expect = 1e-87 Identities = 295/335 (88%), Gaps = 2/335 (0%) Strand = Plus / Plus Query: 30 gataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactcat 88 ||||||||||||||| |||||||| ||||| || |||||||||| ||| ||||||||||| Sbjct: 51033 gataagcacgaaaattaaagcttctataaatacagatacacccagtacatcgaaactcat 51092 Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 |||||| || || |||||||| ||||| |||||||||||||||||||| || |||||||| Sbjct: 51093 tgcccatggataaagaaagaccgtttcaacatcaaaaacaacaaaaactagagcaaacat 51152 Query: 149 ataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcata 208 |||||||| ||||||||||||| |||||| | ||||| ||||||||||| |||||||| Sbjct: 51153 gtaatagcggattcggaattgtaaccaagcatcccccattggttctatacctgattcata 51212 Query: 209 actagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgc 268 |||||| ||||||||||||||||||| || ||||||||||| || ||||| |||||| Sbjct: 51213 actagagagcttctctggtccttcacgaatcggggctaaaactccggaaattagaaatgc 51272 Query: 269 caaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaag 328 |||||||||||| | |||| |||||||||||||| ||| |||||||||||||||||||| Sbjct: 51273 caaaataggaatgacacttgatattattagaaatgcccagaaaatatcatattcgtgaag 51332 Query: 329 cagaaacata-atgtactcccattaatgtggaata 362 |||||||||| ||| ||||| || ||||||||||| Sbjct: 51333 cagaaacatagatgcactcctatgaatgtggaata 51367
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 315 bits (159), Expect = 8e-83 Identities = 274/311 (88%), Gaps = 1/311 (0%) Strand = Plus / Plus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||||||||| |||||||| ||||| || |||||||| ||||| |||||||||| Sbjct: 52222 agataagcacgaaaattaaagcttctataaatacagatacacctaatacatcgaaactca 52281 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 52282 ttgcccatggataaagaaaaactgtttcaacatcaaaaacaacaaaaactagagcaaaca 52341 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| || ||||| ||||||| |||||| ||||| ||||||||||||||||||| Sbjct: 52342 tataataacggattcgaaattgtaaccaagcattgcccattggttctatacccgattcat 52401 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 ||||||| || |||||||| |||| |||| ||||||||||| ||| ||||| |||||| Sbjct: 52402 aactagagagtttctctggccctttgctaatcggggctaaaaccccggaaatgaaaaatg 52461 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| || Sbjct: 52462 ccaaaataggaataagacttgatattattagaaatgcccaaaaaatatcatattcgtaaa 52521 Query: 328 gcagaaacata 338 ||||||||||| Sbjct: 52522 gcagaaacata 52532
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 311 bits (157), Expect = 1e-81 Identities = 288/329 (87%), Gaps = 2/329 (0%) Strand = Plus / Plus Query: 30 gataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactcat 88 ||||||||||||||| |||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 54887 gataagcacgaaaattaaagcttctataaatacggatacgcccaatacatcgaaactcat 54946 Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 ||||| || || ||||| |||||||| |||||||||||||||||||| || |||||||| Sbjct: 54947 ggcccatggataaagaaaaacggtttcgacatcaaaaacaacaaaaactagggcaaacat 55006 Query: 149 ataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcata 208 |||||||| ||||||||||||| |||||| | ||||| ||||||||||| |||||||| Sbjct: 55007 gtaatagcggattcggaattgtatccaagcatcccccattggttctatacctgattcata 55066 Query: 209 actagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgc 268 |||||| | ||| |||||||||| ||||| ||||||||||| || ||||| |||||| Sbjct: 55067 actagagaccttttctggtccttgactaatcggggctaaaactccagaaattagaaatgc 55126 Query: 269 caaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaag 328 |||||||||||||| |||| ||| |||||||||| ||| |||||||||||||||||||| Sbjct: 55127 caaaataggaataacacttgatatcattagaaatgcccagaaaatatcatattcgtgaag 55186 Query: 329 cagaaacata-atgtactcccattaatgt 356 |||||||||| ||||||||| || ||||| Sbjct: 55187 cagaaacatagatgtactcctatgaatgt 55215
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 305 bits (154), Expect = 8e-80 Identities = 272/310 (87%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 30 gataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactcat 88 ||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 54200 gataagcacgaaaattaaagcttctataaatacggatacacccaatacatcgaaactcat 54259 Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 |||||| || || ||||| || ||||| ||||||||||| |||||||| || |||||||| Sbjct: 54260 tgcccatggataaagaaaaaccgtttcaacatcaaaaacgacaaaaactagagcaaacat 54319 Query: 149 ataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcata 208 |||||| || ||||| ||||||| |||||| | ||||| |||||||||||||||||||| Sbjct: 54320 ataataacggattcgaaattgtaaccaagcatcgcccattggttctatacccgattcata 54379 Query: 209 actagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgc 268 ||||||||| ||||||||||||| ||||| ||| ||||||| || ||||| ||||||| Sbjct: 54380 actagaaagtttctctggtcctttactaatcggagctaaaactccggaaataaaaaatgc 54439 Query: 269 caaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaag 328 |||||| ||||||| |||| |||||||||||| | ||| |||||||||||||||| ||| Sbjct: 54440 caaaatgggaataacacttgatattattagaaaagcccagaaaatatcatattcgtaaag 54499 Query: 329 cagaaacata 338 |||||||||| Sbjct: 54500 cagaaacata 54509
>gb|AY936342.1| Evolvulus glomeratus NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1744 Score = 305 bits (154), Expect = 8e-80 Identities = 272/310 (87%), Gaps = 1/310 (0%) Strand = Plus / Minus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||| ||||| |||||||||| ||| || |||||||||||||| |||||||||| Sbjct: 310 agataagcacaaaaatgaaagcttcgagaaatacagatacacccaatacatcgaaactca 251 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| ||||| ||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 250 ttgcccatgggtaaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaaca 191 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| || ||||| ||||||| |||||| | ||||| ||||||||||| ||||||| Sbjct: 190 tataataacggattcgaaattgtaaccaagcatcgcccattggttctatacctgattcat 131 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 |||||||||| |||||||| || | |||| ||||||||||| ||| |||||| |||| | Sbjct: 130 aactagaaagtttctctggccccttgctaatcggggctaaaaccccggaaatcaaaaaag 71 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 |||||||||||||||||| | |||||||||||||| |||||||||||||||||||| || Sbjct: 70 tcaaaataggaataaggctggatattattagaaatgcccaaaaaatatcatattcgtaaa 11 Query: 328 gcagaaacat 337 | |||||||| Sbjct: 10 gtagaaacat 1
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 305 bits (154), Expect = 8e-80 Identities = 272/310 (87%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 30 gataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactcat 88 ||||||||||||||| |||||||| | ||| ||||||||||||||||| ||||||||||| Sbjct: 50678 gataagcacgaaaatcaaagcttctagaaatacggatacacccaatacatcgaaactcat 50737 Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 |||||| || || |||||||| ||||| |||||||||||||||||||| | |||||||| Sbjct: 50738 tgcccatggataaagaaagaccgtttcaacatcaaaaacaacaaaaactaaagcaaacat 50797 Query: 149 ataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcata 208 |||||| || |||||||||||||||||||| | || || |||||||||||||||||||| Sbjct: 50798 ataatatcggattcggaattgtacccaagcatcccctattggttctatacccgattcata 50857 Query: 209 actagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgc 268 ||||||||||||||| |||||||| || |||||||||| || ||||| ||||||| Sbjct: 50858 actagaaagcttctcgggtccttccctcgttggggctaaaactccggaaattaaaaatgc 50917 Query: 269 caaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaag 328 ||||||||||||| |||| ||||| |||||||| ||| |||||||||||||||||||| Sbjct: 50918 taaaataggaataacacttgatattagtagaaatgcccagaaaatatcatattcgtgaag 50977 Query: 329 cagaaacata 338 |||||||||| Sbjct: 50978 cagaaacata 50987
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 293 bits (148), Expect = 3e-76 Identities = 272/312 (87%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||| Sbjct: 51525 agataagcacgaaaatgaaagcttctataaatacagatacacccaatacgtcgaaactca 51584 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 51585 ttgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaaca 51644 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| || ||||| ||||||| |||||| | ||||| |||||||||||||| |||| Sbjct: 51645 tataataacggattcgaaattgtaaccaagcatcgcccattggttctatacccgactcat 51704 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 || ||||||| ||||| || |||| |||| ||||||||| | || ||||| |||||| Sbjct: 51705 aagtagaaagtttctccggccctttgctaatcggggctaacactccggaaatgaaaaatg 51764 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 |||||||||||| |||| ||| |||||||||||||| |||||||| ||||||||||| || Sbjct: 51765 ccaaaataggaacaaggattgatattattagaaatgcccaaaaaaaatcatattcgtaaa 51824 Query: 328 gcagaaacataa 339 |||||||||||| Sbjct: 51825 gcagaaacataa 51836
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 293 bits (148), Expect = 3e-76 Identities = 272/312 (87%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||| Sbjct: 51444 agataagcacgaaaatgaaagcttctataaatacagatacacccaatacgtcgaaactca 51503 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 51504 ttgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaaca 51563 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| || ||||| ||||||| |||||| | ||||| |||||||||||||| |||| Sbjct: 51564 tataataacggattcgaaattgtaaccaagcatcgcccattggttctatacccgactcat 51623 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 || ||||||| |||||||| |||| |||| ||||||||| | || ||||| |||||| Sbjct: 51624 aagtagaaagtttctctggccctttgctaatcggggctaacactccggaaatgaaaaatg 51683 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 |||||||||||| |||| | | |||||||||||||| |||||||| ||||||||||| || Sbjct: 51684 ccaaaataggaacaaggatggatattattagaaatgcccaaaaaaaatcatattcgtaaa 51743 Query: 328 gcagaaacataa 339 |||||||||||| Sbjct: 51744 gcagaaacataa 51755
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 293 bits (148), Expect = 3e-76 Identities = 272/312 (87%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||| Sbjct: 51440 agataagcacgaaaatgaaagcttctataaatacagatacacccaatacgtcgaaactca 51499 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 51500 ttgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaaca 51559 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| || ||||| ||||||| |||||| | ||||| |||||||||||||| |||| Sbjct: 51560 tataataacggattcgaaattgtaaccaagcatcgcccattggttctatacccgactcat 51619 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 || ||||||| |||||||| |||| |||| ||||||||| | || ||||| |||||| Sbjct: 51620 aagtagaaagtttctctggccctttgctaatcggggctaacactccggaaatgaaaaatg 51679 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 |||||||||||| |||| | | |||||||||||||| |||||||| ||||||||||| || Sbjct: 51680 ccaaaataggaacaaggatggatattattagaaatgcccaaaaaaaatcatattcgtaaa 51739 Query: 328 gcagaaacataa 339 |||||||||||| Sbjct: 51740 gcagaaacataa 51751
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 291 bits (147), Expect = 1e-75 Identities = 290/335 (86%), Gaps = 2/335 (0%) Strand = Plus / Plus Query: 30 gataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactcat 88 ||||||||||||||| |||||||| ||||| ||| |||| ||||||| || ||||||| Sbjct: 53885 gataagcacgaaaatcaaagcttctataaatacgtatacgcccaatatatcaaaactcac 53944 Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 ||||| || || |||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 53945 ggcccatggataaagaaagaccgtttcgacatcaaaaacaacaaaaacgagagcaaacat 54004 Query: 149 ataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcata 208 |||||||| ||||| ||||||| |||||| | || || |||||||||||||||||||| Sbjct: 54005 gtaatagcggattcgaaattgtatccaagcatcccctattggttctatacccgattcata 54064 Query: 209 actagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgc 268 ||| || |||||||||||||||||||||| |||||||||| ||| ||||| |||||| Sbjct: 54065 actggagagcttctctggtccttcactaattggggctaaaaccccggaaattagaaatgc 54124 Query: 269 caaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaag 328 |||||||||||||| |||| ||| |||||||||| ||| |||||||||||||||| ||| Sbjct: 54125 caaaataggaataacacttgatatcattagaaatgcccagaaaatatcatattcgtaaag 54184 Query: 329 cagaaacata-atgtactcccattaatgtggaata 362 |||||||||| ||||||||| || ||||| ||||| Sbjct: 54185 cagaaacatagatgtactcctatgaatgtagaata 54219
>gb|AY936340.1| Falkia repens NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1715 Score = 289 bits (146), Expect = 5e-75 Identities = 270/310 (87%), Gaps = 1/310 (0%) Strand = Plus / Minus Query: 29 agataagcacgaaaataaa-gcttcgataaaaacggatacacccaatacgtcgaaactca 87 ||||||||||||||||||| ||||| | ||| || |||||||||||||| |||||||||| Sbjct: 310 agataagcacgaaaataaaagcttctagaaatacagatacacccaatacatcgaaactca 251 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 250 ttgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaaca 191 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| || |||| ||||||| |||||| | ||||| ||||||||||| ||||||| Sbjct: 190 tataataacggattctaaattgtaaccaagcatcgcccattggttctatacctgattcat 131 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 |||||||||| |||||||| |||| ||| ||||||||||| ||| ||||| |||| | Sbjct: 130 aactagaaagtttctctggccctttgttaatcggggctaaaaccccggaaataaaaaaag 71 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 ||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| || Sbjct: 70 ccaaaataggaataaggctggatattattagaaatgcccaaaaaatatcatattcgtaaa 11 Query: 328 gcagaaacat 337 | |||||||| Sbjct: 10 gtagaaacat 1
>gb|AY936338.1| Jacquemontia tamnifolia NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1706 Score = 289 bits (146), Expect = 5e-75 Identities = 270/310 (87%), Gaps = 1/310 (0%) Strand = Plus / Minus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||| ||||| |||||||| ||||| || |||| ||||||||| |||||||||| Sbjct: 310 agataagcacaaaaatcaaagcttctataaatacagatagacccaatacatcgaaactca 251 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| ||||||||||||||||||||||| ||||||| Sbjct: 250 ttgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaacgagagcaaaca 191 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| || ||||| ||||||| |||||| | ||||||||||| ||||| ||||||| Sbjct: 190 tataataacggattcgaaattgtaaccaagcatcgcccatgggttcgataccggattcat 131 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 |||||||||| |||||||| |||| |||| ||||||||||| || |||||| |||| | Sbjct: 130 aactagaaagtttctctgggcctttgctaatcggggctaaaacgccggaaatcaaaaaag 71 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 |||||||||||| ||||| | |||||||||||||| |||||||||||||||||||| || Sbjct: 70 ccaaaataggaaacaggctggatattattagaaatgcccaaaaaatatcatattcgtaaa 11 Query: 328 gcagaaacat 337 | |||||||| Sbjct: 10 gtagaaacat 1
>gb|AY936336.1| Operculina aequisepala NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1721 Score = 289 bits (146), Expect = 5e-75 Identities = 270/310 (87%), Gaps = 1/310 (0%) Strand = Plus / Minus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||||||||| |||||||| | ||| || |||||||||||||| |||||||||| Sbjct: 310 agataagcacgaaaatgaaagcttctagaaatacagatacacccaatacatcgaaactca 251 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 250 ttgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaaca 191 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| || ||||| ||||||| |||||| | ||||| ||||||||||| ||||||| Sbjct: 190 tataataacggattcgaaattgtaaccaagcatcgcccataggttctatacctgattcat 131 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 |||||||||| |||||||| |||| |||| ||||||||||| ||| |||| |||| | Sbjct: 130 aactagaaagtttctctggccctttgctaatcggggctaaaaccccggaaagaaaaaaag 71 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 ||||||||||||||||||| | |||||||||||||| |||||||| ||||||||||| || Sbjct: 70 ccaaaataggaataaggctggatattattagaaatgcccaaaaaagatcatattcgtaaa 11 Query: 328 gcagaaacat 337 | |||||||| Sbjct: 10 gtagaaacat 1
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 289 bits (146), Expect = 5e-75 Identities = 270/310 (87%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 30 gataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactcat 88 ||||||||||||||| |||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 54413 gataagcacgaaaattaaagcttctataaatacggatacccccaatacatcgaaactcat 54472 Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 |||||| || || ||||| || ||||| |||||||||||||||||||| || |||||||| Sbjct: 54473 tgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacat 54532 Query: 149 ataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcata 208 |||||| || ||||| ||||||| |||||| | ||||| ||||||||||| |||||||| Sbjct: 54533 ataataacggattcgaaattgtaaccaagcatcgcccattggttctatacctgattcata 54592 Query: 209 actagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgc 268 ||| ||||| |||||||| |||| |||| ||||||||||| || ||||| |||||| Sbjct: 54593 actcgaaagtttctctggccctttgctaatcggggctaaaattccggaaattmgaaatgc 54652 Query: 269 caaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaag 328 |||||||||||||| |||| |||||||||||||| ||| |||||||||||||||| ||| Sbjct: 54653 caaaataggaataacacttgatattattagaaatgcccagaaaatatcatattcgtaaag 54712 Query: 329 cagaaacata 338 |||||||||| Sbjct: 54713 cagaaacata 54722
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 285 bits (144), Expect = 7e-74 Identities = 271/312 (86%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||| Sbjct: 52364 agataagcacgaaaatgaaagcttctataaatacagatacacccaatacgtcgaaactca 52423 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 52424 ttgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaaca 52483 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| || ||||| ||||||| |||||| | ||||| |||||||||||||| |||| Sbjct: 52484 tataataacggattcgaaattgtaaccaagcatcgcccattggttctatacccgactcat 52543 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 || ||||||| ||||| || |||| |||| ||||||||| | || ||||| |||||| Sbjct: 52544 aagtagaaagtttctccggccctttgctaatcggggctaacactccggaaattaaaaatg 52603 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 |||||||||||| |||| | | |||||||||||||| |||||||| ||||||||||| || Sbjct: 52604 ccaaaataggaacaaggatagatattattagaaatgcccaaaaaaaatcatattcgtaaa 52663 Query: 328 gcagaaacataa 339 |||||||||||| Sbjct: 52664 gcagaaacataa 52675
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 285 bits (144), Expect = 7e-74 Identities = 271/312 (86%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||| Sbjct: 51389 agataagcacgaaaatgaaagcttctataaatacagatacacccaatacgtcgaaactca 51448 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 51449 ttgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaaca 51508 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| || ||||| ||||||| |||||| | ||||| |||||||||||||| |||| Sbjct: 51509 tataataacggattcgaaattgtaaccaagcatcgcccattggttctatacccgactcat 51568 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 || ||||||| ||||| || |||| |||| ||||||||| | || ||||| |||||| Sbjct: 51569 aagtagaaagtttctccggccctttgctaatcggggctaacactccggaaatgaaaaatg 51628 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 |||||||||||| |||| | | |||||||||||||| |||||||| ||||||||||| || Sbjct: 51629 ccaaaataggaacaaggatggatattattagaaatgcccaaaaaaaatcatattcgtaaa 51688 Query: 328 gcagaaacataa 339 |||||||||||| Sbjct: 51689 gcagaaacataa 51700
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 285 bits (144), Expect = 7e-74 Identities = 271/312 (86%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||| Sbjct: 52362 agataagcacgaaaatgaaagcttctataaatacagatacacccaatacgtcgaaactca 52421 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 52422 ttgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaaca 52481 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| || ||||| ||||||| |||||| | ||||| |||||||||||||| |||| Sbjct: 52482 tataataacggattcgaaattgtaaccaagcatcgcccattggttctatacccgactcat 52541 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 || ||||||| ||||| || |||| |||| ||||||||| | || ||||| |||||| Sbjct: 52542 aagtagaaagtttctccggccctttgctaatcggggctaacactccggaaattaaaaatg 52601 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 |||||||||||| |||| | | |||||||||||||| |||||||| ||||||||||| || Sbjct: 52602 ccaaaataggaacaaggatagatattattagaaatgcccaaaaaaaatcatattcgtaaa 52661 Query: 328 gcagaaacataa 339 |||||||||||| Sbjct: 52662 gcagaaacataa 52673
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 285 bits (144), Expect = 7e-74 Identities = 271/312 (86%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||| Sbjct: 52312 agataagcacgaaaatgaaagcttctataaatacagatacacccaatacgtcgaaactca 52371 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 52372 ttgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaaca 52431 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| || ||||| ||||||| |||||| | ||||| |||||||||||||| |||| Sbjct: 52432 tataataacggattcgaaattgtaaccaagcatcgcccattggttctatacccgactcat 52491 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 || ||||||| ||||| || |||| |||| ||||||||| | || ||||| |||||| Sbjct: 52492 aagtagaaagtttctccggccctttgctaatcggggctaacactccggaaattaaaaatg 52551 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 |||||||||||| |||| | | |||||||||||||| |||||||| ||||||||||| || Sbjct: 52552 ccaaaataggaacaaggatggatattattagaaatgcccaaaaaaaatcatattcgtaaa 52611 Query: 328 gcagaaacataa 339 |||||||||||| Sbjct: 52612 gcagaaacataa 52623
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 283 bits (143), Expect = 3e-73 Identities = 270/311 (86%), Gaps = 1/311 (0%) Strand = Plus / Minus Query: 30 gataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactcat 88 |||||||||||| || |||||||| ||||| |||||||| || ||||| ||||||||||| Sbjct: 11048 gataagcacgaatatgaaagcttctataaatacggatacccctaatacatcgaaactcat 10989 Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 ||||||||| || ||||| || ||||| ||||||||||||||||||| ||| |||||||| Sbjct: 10988 tgcccaaggataaagaaaaaccgtttcaacatcaaaaacaacaaaaatgagagcaaacat 10929 Query: 149 ataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcata 208 |||||| || ||||| ||||||| |||||| | || || |||||||| ||||||||||| Sbjct: 10928 ataataacggattcgaaattgtaaccaagcatcacctattggttctattcccgattcata 10869 Query: 209 actagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgc 268 ||||||||| ||||||||||| | |||| ||||||||||| || ||||| |||||| Sbjct: 10868 actagaaagtttctctggtcccttgctaatcggggctaaaattccagaaattagaaatgc 10809 Query: 269 caaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaag 328 |||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||| Sbjct: 10808 caaaataggaataaaacttgatattattagaaatgcccaaaaaatatcatattcgtaaag 10749 Query: 329 cagaaacataa 339 |||||||||| Sbjct: 10748 aagaaacataa 10738
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 276 bits (139), Expect = 7e-71 Identities = 269/311 (86%), Gaps = 1/311 (0%) Strand = Plus / Plus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||| ||||| |||||||| | ||| || |||||||| ||||| |||||||||| Sbjct: 49569 agataagcacaaaaattaaagcttctacaaatacagatacacctaatacatcgaaactca 49628 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || |||||||||||||||||||||||||| || ||||||| Sbjct: 49629 ttgcccatggataaagaaaaaccgtttccacatcaaaaacaacaaaaacaagagcaaaca 49688 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 |||||||||| |||| ||||||| |||||| | || || ||||||||||| ||||||| Sbjct: 49689 tataatagcggattctaaattgtaaccaagcgtcacctattggttctatacctgattcat 49748 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 |||||||||| ||||| ||||||| ||| ||||||||||| || ||||| ||||| Sbjct: 49749 aactagaaagtttctccggtcctttgctactcggggctaaaaatcccgaaatgaaaaata 49808 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 |||||||||||||||| |||| |||||| ||||||| |||||||||||||||||||| || Sbjct: 49809 ccaaaataggaataagacttgatattatcagaaatgcccaaaaaatatcatattcgtaaa 49868 Query: 328 gcagaaacata 338 ||||||||||| Sbjct: 49869 gcagaaacata 49879
>gb|AY936344.1| Dinetus truncatus NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1710 Score = 274 bits (138), Expect = 3e-70 Identities = 268/310 (86%), Gaps = 1/310 (0%) Strand = Plus / Minus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||||||||| |||||||| | ||| ||||||||||||||||| |||||||||| Sbjct: 310 agataagcacgaaaatgaaagcttctagaaatacggatacacccaatacatcgaaactca 251 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| ||||||||||||||||| || || ||||||| Sbjct: 250 ttgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaacactagagcaaaca 191 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| || |||| ||||||| |||||| | ||||| ||||||||||| ||||||| Sbjct: 190 tataataacggattctaaattgtaaccaagcatcgcccatcggttctatacctgattcat 131 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 |||||||||| |||||||| || | |||| ||||||||||| || |||||| |||| | Sbjct: 130 aactagaaagtttctctggccccttgctaagcggggctaaaactccggaaatcaaaaaag 71 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 ||||||||||||||||| | | |||||||||||||| |||||||| ||||||||||| || Sbjct: 70 ccaaaataggaataaggatggatattattagaaatgcccaaaaaagatcatattcgtaaa 11 Query: 328 gcagaaacat 337 | |||||||| Sbjct: 10 gtagaaacat 1
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 270 bits (136), Expect = 4e-69 Identities = 269/312 (86%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||| ||||||||||| |||||||| ||||| || ||||||||||||||||||||||||| Sbjct: 51998 agatcagcacgaaaatgaaagcttctataaatacagatacacccaatacgtcgaaactca 52057 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 52058 ttgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaaca 52117 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| || |||| ||||||| |||||| | ||||| |||||||||||||| |||| Sbjct: 52118 tataataacggattctaaattgtaaccaagcatcgcccattggttctatacccgactcat 52177 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 || ||||||| ||||| || |||| |||| |||||||| | || ||||| |||||| Sbjct: 52178 aagtagaaagtttctccggccctttgctaattggggctaacactccggaaatgaaaaatg 52237 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 |||||||||||| |||| ||| |||||||||||||| |||||||| ||||||||||| || Sbjct: 52238 ccaaaataggaacaaggattgatattattagaaatgcccaaaaaaaatcatattcgtaaa 52297 Query: 328 gcagaaacataa 339 |||||||||||| Sbjct: 52298 gcagaaacataa 52309
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 270 bits (136), Expect = 4e-69 Identities = 269/312 (86%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||| ||||||||| |||||||| ||||| || ||||||||||||| ||||||||||| Sbjct: 51531 agataaccacgaaaatgaaagcttctataaatacagatacacccaataggtcgaaactca 51590 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| |||||||||||||||||||| | ||||||| Sbjct: 51591 ttgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactacagcaaaca 51650 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| || ||||| ||||||| |||||| | ||||| |||||||||||||| |||| Sbjct: 51651 tataataacggattcgaaattgtaaccaagcatcgcccattggttctatacccgactcat 51710 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 || ||||||| ||||| || |||| |||| ||||||||| | || ||||| |||||| Sbjct: 51711 aagtagaaagtttctccggccctttgctaatcggggctaacactccggaaatgaaaaatg 51770 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 |||||||||||| |||| ||| |||||||||||||| |||||||| ||||||||||| || Sbjct: 51771 ccaaaataggaagaaggattgatattattagaaatgcccaaaaaaaatcatattcgtaaa 51830 Query: 328 gcagaaacataa 339 |||||||||||| Sbjct: 51831 gcagaaacataa 51842
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 268 bits (135), Expect = 2e-68 Identities = 268/311 (86%), Gaps = 1/311 (0%) Strand = Plus / Plus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||||||||| |||||||| | ||| || |||||||| ||||| || ||||||| Sbjct: 49948 agataagcacgaaaattaaagcttctacaaatacagatacacctaatacatcaaaactca 50007 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 50008 ttgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaaca 50067 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 |||||||||| |||| ||||||| |||||| | || || ||||||||||||||||||| Sbjct: 50068 tataatagcggattctaaattgtaaccaagcgtcgcctattggttctatacccgattcat 50127 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 |||||||||| ||||| ||||||| |||| ||| ||||||| || ||||| ||||| Sbjct: 50128 aactagaaagtttctccggtcctttgctaatcggagctaaaaatcccgaaatgaaaaata 50187 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 |||||||||||||||| |||| ||| |||||||||| |||||||||||||||||| | || Sbjct: 50188 ccaaaataggaataagacttgatatgattagaaatgcccaaaaaatatcatattcataaa 50247 Query: 328 gcagaaacata 338 ||||||||||| Sbjct: 50248 gcagaaacata 50258
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 268 bits (135), Expect = 2e-68 Identities = 268/311 (86%), Gaps = 1/311 (0%) Strand = Plus / Minus Query: 29 agataagcacgaaaataa-agcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||||||||| | |||||| ||||| |||||||| ||||||| |||||||||| Sbjct: 14122 agataagcacgaaaatgagagcttctataaatacggatacccccaatatatcgaaactca 14063 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 |||||| || || ||||| | |||||| |||||||||||||||||||| | ||||||| Sbjct: 14062 gtgcccatggataaagaaaaatggtttcaacatcaaaaacaacaaaaactaaagcaaaca 14003 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 ||||||| |||||||| ||||||| |||||| | ||||| ||||||||||||||||||| Sbjct: 14002 tataataacgtattcgaaattgtaaccaagcatcgcccattggttctatacccgattcat 13943 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 |||| ||||| |||||||| ||| ||| |||||||||||| || ||||| ||||| Sbjct: 13942 aactcgaaagtttctctggccctatgctagtcggggctaaaagtccggaaattcgaaatg 13883 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 ||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||| || Sbjct: 13882 ccaaaataggaataacacttgatattattagaaatgcccagaaaatatcatattcgtaaa 13823 Query: 328 gcagaaacata 338 ||||||||||| Sbjct: 13822 gcagaaacata 13812
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 268 bits (135), Expect = 2e-68 Identities = 268/311 (86%), Gaps = 1/311 (0%) Strand = Plus / Plus Query: 29 agataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactca 87 |||||||||||||||| |||||||| | ||| || |||||||| ||||| || ||||||| Sbjct: 49947 agataagcacgaaaattaaagcttctacaaatacagatacacctaatacatcaaaactca 50006 Query: 88 ttgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaaca 147 ||||||| || || ||||| || ||||| |||||||||||||||||||| || ||||||| Sbjct: 50007 ttgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaaca 50066 Query: 148 tataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcat 207 |||||||||| |||| ||||||| |||||| | || || ||||||||||||||||||| Sbjct: 50067 tataatagcggattctaaattgtaaccaagcgtcgcctattggttctatacccgattcat 50126 Query: 208 aactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatg 267 |||||||||| ||||| ||||||| |||| ||| ||||||| || ||||| ||||| Sbjct: 50127 aactagaaagtttctccggtcctttgctaatcggagctaaaaatcccgaaatgaaaaata 50186 Query: 268 ccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaa 327 |||||||||||||||| |||| ||| |||||||||| |||||||||||||||||| | || Sbjct: 50187 ccaaaataggaataagacttgatatgattagaaatgcccaaaaaatatcatattcataaa 50246 Query: 328 gcagaaacata 338 ||||||||||| Sbjct: 50247 gcagaaacata 50257
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 266 bits (134), Expect = 7e-68 Identities = 267/310 (86%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 30 gataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactcat 88 ||||||||||||||| |||||||| || || |||| ||| |||||||| ||||||||||| Sbjct: 53512 gataagcacgaaaatgaaagcttctatgaatacgggtacccccaatacatcgaaactcat 53571 Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 |||||| || || ||||| || ||||| |||||||||||||||||||| || |||||||| Sbjct: 53572 tgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacat 53631 Query: 149 ataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcata 208 |||||| || ||||| ||||||| |||||| | ||||| |||||||||||||||||||| Sbjct: 53632 ataataacggattcgaaattgtaaccaagcatcgcccattggttctatacccgattcata 53691 Query: 209 actagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgc 268 ||||||||| || ||||| || | |||| ||||||||||| || ||||| |||||| Sbjct: 53692 actagaaagtttttctggaccctttctaatcggggctaaaactccagaaattagaaatgc 53751 Query: 269 caaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaag 328 ||||||||||||| |||| |||||||||||||| ||| |||||||||||||||| ||| Sbjct: 53752 caaaataggaatagcacttgatattattagaaatgcccagaaaatatcatattcgtaaag 53811 Query: 329 cagaaacata 338 |||||||||| Sbjct: 53812 cagaaacata 53821
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 264 bits (133), Expect = 3e-67 Identities = 305/357 (85%), Gaps = 4/357 (1%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| ||||||| ||| |||||||||||||| |||||||| ||||| ||||| Sbjct: 52884 tgcataaactaaaccgacaattaggataagcacgaaaattaaagcttctataaagacgga 52943 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 ||| || ||||| || |||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 52944 tacccctaatacatcaaaactcattgcccacggataaagaaaaactgtttcaacatcaaa 53003 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| || |||||||||||||| || |||| |||||||||||||| | || Sbjct: 53004 aacaacaaaaactagagcaaacatataataacggattctaaattgtacccaagcatcgcc 53063 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 ||| |||||||| |||||||||||||| ||||| |||||||| ||| |||| ||||| Sbjct: 53064 cattggttctattcccgattcataactcgaaagtttctctggctctttgctaagaggggc 53123 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 ||||| || ||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 53124 taaaactccagaaattagaaatgccaaaataggaataacacttgatattattagaaatac 53183 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaa 360 ||| |||||||||||||||| |||||||||||| || ||||||| || ||||||||| Sbjct: 53184 ccagaaaatatcatattcgtaaagcagaaacataaacgtactcctatcaatgtggaa 53240
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 264 bits (133), Expect = 3e-67 Identities = 305/357 (85%), Gaps = 4/357 (1%) Strand = Plus / Plus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttcgataaaaacgga 64 |||||||||||| ||||||| ||| |||||||||||||| |||||||| ||||| ||||| Sbjct: 52858 tgcataaactaaaccgacaattaggataagcacgaaaattaaagcttctataaagacgga 52917 Query: 65 tacacccaatacgtcgaaactcattgcccaagggtatagaaagacggtttccacatcaaa 124 ||| || ||||| || |||||||||||||| || || ||||| || ||||| |||||||| Sbjct: 52918 tacccctaatacatcaaaactcattgcccacggataaagaaaaactgtttcaacatcaaa 52977 Query: 125 aacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcc 184 |||||||||||| || |||||||||||||| || |||| |||||||||||||| | || Sbjct: 52978 aacaacaaaaactagagcaaacatataataacggattctaaattgtacccaagcatcgcc 53037 Query: 185 catgggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggc 244 ||| |||||||| |||||||||||||| ||||| |||||||| ||| |||| ||||| Sbjct: 53038 cattggttctattcccgattcataactcgaaagtttctctggctctttgctaagaggggc 53097 Query: 245 taaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgt 304 ||||| || ||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 53098 taaaactccagaaattagaaatgccaaaataggaataacacttgatattattagaaatac 53157 Query: 305 ccaaaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtggaa 360 ||| |||||||||||||||| |||||||||||| || ||||||| || ||||||||| Sbjct: 53158 ccagaaaatatcatattcgtaaagcagaaacataaacgtactcctatcaatgtggaa 53214
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 258 bits (130), Expect = 2e-65 Identities = 269/314 (85%), Gaps = 1/314 (0%) Strand = Plus / Plus Query: 45 aaagcttcgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtataga 104 |||||||| ||||| |||||||| |||||||| || |||||||||||||| ||||| ||| Sbjct: 113205 aaagcttctataaatacggatacccccaatacatcaaaactcattgcccatgggtaaaga 113264 Query: 105 aagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcgg 164 ||||| ||||| |||||||||||||||||||| || |||||||||||||| || ||| | Sbjct: 113265 aagactgtttcaacatcaaaaacaacaaaaactagagcaaacatataataacggatttga 113324 Query: 165 aattgtacccaagcccctcccatgggttctatacccgattcataactagaaagcttctct 224 ||||||| |||||| | ||||| |||||||| || ||||||||||||||||| || ||| Sbjct: 113325 aattgtaaccaagcatcgcccatcggttctatcccagattcataactagaaagtttttct 113384 Query: 225 ggtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataagg 284 || |||| |||| || ||||||| || |||||| |||||||||||||||||||| | Sbjct: 113385 ggcccttttctaattggagctaaaattccagaaatcagaaatgccaaaataggaataaag 113444 Query: 285 cttgctattattagaaatgtccaaaaaatatcatattcgtgaagcagaaacat-aatgta 343 | | ||||||||||||||||||||||||||||||||| | ||||| |||||| |||||| Sbjct: 113445 atcgatattattagaaatgtccaaaaaatatcatattcataaagcaaaaacataaatgta 113504 Query: 344 ctcccattaatgtg 357 |||| || |||||| Sbjct: 113505 ctcctatgaatgtg 113518
>gb|U27653.1|LLU27653 Lupinus luteus NADH-plastoquinone oxidoreductase (ndhC) gene, chloroplast gene encoding chloroplast protein, complete cds Length = 363 Score = 256 bits (129), Expect = 7e-65 Identities = 265/309 (85%), Gaps = 1/309 (0%) Strand = Plus / Minus Query: 30 gataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactcat 88 ||||||||||||||| |||||||| ||||| |||||||| |||||||| ||||||||||| Sbjct: 309 gataagcacgaaaatcaaagcttctataaatacggatacccccaatacatcgaaactcat 250 Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 |||||| || || ||||| || ||||| |||||||||||||||||||| || |||||||| Sbjct: 249 tgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacat 190 Query: 149 ataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcata 208 |||||| || |||| ||||||| |||||| | ||||| |||||||| ||||||||||| Sbjct: 189 ataataacggattctaaattgtaaccaagcatcgcccattggttctattcccgattcata 130 Query: 209 actagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgc 268 ||| || || ||||||||||| | |||| |||||||||| || ||||| ||||||| Sbjct: 129 actcgagagtttctctggtcccttgctaattggggctaaaattccagaaattaaaaatgc 70 Query: 269 caaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaag 328 ||||| ||||||||||| | ||||||||||||| |||||||||||||||||||| ||| Sbjct: 69 taaaatcggaataaggctcgagattattagaaatgcccaaaaaatatcatattcgtaaag 10 Query: 329 cagaaacat 337 || |||||| Sbjct: 9 caaaaacat 1
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 250 bits (126), Expect = 4e-63 Identities = 265/310 (85%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 30 gataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactcat 88 ||||||||||||||| |||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 49036 gataagcacgaaaattaaagcttctataaatacggatacacccaatatatcgaaactcat 49095 Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 |||||| || || ||||| || ||||| |||||||||||||||||||| || |||||||| Sbjct: 49096 tgcccatggataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacat 49155 Query: 149 ataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcata 208 |||||| || ||||| ||||||| |||||| | ||||| ||||||||||||||||| || Sbjct: 49156 ataataacggattcgaaattgtaaccaagcatcccccataggttctatacccgattcgta 49215 Query: 209 actagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgc 268 ||||||||| ||||| ||||||| |||| ||| ||||||| || |||| |||||| Sbjct: 49216 actagaaagtttctcgggtcctttgctaatcggtgctaaaattccggaaaatagaaatgc 49275 Query: 269 caaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaag 328 ||||||||||||| |||| |||||||| ||||| ||| |||||||||||||| | ||| Sbjct: 49276 taaaataggaataacacttgatattattaaaaatgcccagaaaatatcatattcataaag 49335 Query: 329 cagaaacata 338 ||||||||| Sbjct: 49336 tagaaacata 49345
>gb|AC160516.1| Medicago truncatula chromosome 7 BAC clone mth2-66d22, complete sequence Length = 116154 Score = 242 bits (122), Expect = 1e-60 Identities = 267/314 (85%), Gaps = 1/314 (0%) Strand = Plus / Minus Query: 45 aaagcttcgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtataga 104 |||||||| ||||| |||||||| |||||||| || |||||||||||||| ||||| ||| Sbjct: 83448 aaagcttctataaatacggatacccccaatacatcaaaactcattgcccatgggtaaaga 83389 Query: 105 aagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcgg 164 ||||| ||||| |||||||||||||||||||| || |||||||||||||| || ||| | Sbjct: 83388 aagactgtttcaacatcaaaaacaacaaaaactagagcaaacatataataacggatttga 83329 Query: 165 aattgtacccaagcccctcccatgggttctatacccgattcataactagaaagcttctct 224 ||||||| |||||| | ||||| |||||||| | ||||||||||| ||||| || ||| Sbjct: 83328 aattgtaaccaagcatcgcccatcggttctatcctagattcataacttgaaagtttttct 83269 Query: 225 ggtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataagg 284 || |||| |||| || ||||||| || |||||| |||||||||||||||||||| | Sbjct: 83268 ggcccttttctaattggagctaaaattccagaaatcagaaatgccaaaataggaataaag 83209 Query: 285 cttgctattattagaaatgtccaaaaaatatcatattcgtgaagcagaaacat-aatgta 343 | | ||||||||||||||||||||||||||||||||| | ||||| |||||| |||||| Sbjct: 83208 atcgatattattagaaatgtccaaaaaatatcatattcataaagcaaaaacataaatgta 83149 Query: 344 ctcccattaatgtg 357 |||| || |||||| Sbjct: 83148 ctcctatgaatgtg 83135
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 236 bits (119), Expect = 6e-59 Identities = 251/295 (85%) Strand = Plus / Minus Query: 45 aaagcttcgataaaaacggatacacccaatacgtcgaaactcattgcccaagggtataga 104 |||||||| ||||| ||||||| |||||||| || |||||||||||||| || || ||| Sbjct: 10991 aaagcttctataaatacggatatccccaatacatcaaaactcattgcccatggataaaga 10932 Query: 105 aagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcgg 164 || || ||||| |||||||||||||||||||| || |||||||||||||| || ||| | Sbjct: 10931 aaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacatataataacggatttga 10872 Query: 165 aattgtacccaagcccctcccatgggttctatacccgattcataactagaaagcttctct 224 ||||||| |||||| ||||||| |||||||| |||||||||||||||||||| |||||| Sbjct: 10871 aattgtaaccaagcatctcccattggttctattcccgattcataactagaaagtttctct 10812 Query: 225 ggtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataagg 284 || |||| ||| |||||| |||| || ||||| | |||||||||||| ||||||| | Sbjct: 10811 ggccctttgttaatcggggccaaaaagccagaaattgtaaatgccaaaatcggaataaag 10752 Query: 285 cttgctattattagaaatgtccaaaaaatatcatattcgtgaagcagaaacataa 339 | | |||||||||||||| |||||||||||||||||| | ||||| |||||||| Sbjct: 10751 atcgatattattagaaatgcccaaaaaatatcatattcataaagcaaaaacataa 10697
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 210 bits (106), Expect = 4e-51 Identities = 260/310 (83%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 30 gataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactcat 88 ||||||||||||||| |||||||| |||||| ||||||| || | ||| ||||||||||| Sbjct: 49117 gataagcacgaaaatgaaagcttctataaaagcggatacccctagtacatcgaaactcat 49176 Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 |||||| || || ||||| |||||||| |||||||||||||||||||| || |||||||| Sbjct: 49177 tgcccacggatacagaaaaacggtttcaacatcaaaaacaacaaaaactagagcaaacat 49236 Query: 149 ataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcata 208 |||||| || |||| ||||||| |||||| | || || ||||||||||| |||||||| Sbjct: 49237 ataataacggattctaaattgtaaccaagcatccccgatcggttctatacctgattcata 49296 Query: 209 actagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgc 268 ||||||||| ||||| || || | ||| || | ||||| ||| ||||| |||||| Sbjct: 49297 actagaaagtttctccggccccttcgtaattggagataaaaccccggaaattagaaatgc 49356 Query: 269 caaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaag 328 ||||| ||||||| |||| |||||||| ||||| ||| |||||||||||||||| ||| Sbjct: 49357 caaaacaggaatagcacttgatattattaaaaatgcccagaaaatatcatattcgtaaag 49416 Query: 329 cagaaacata 338 |||||||||| Sbjct: 49417 cagaaacata 49426
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 194 bits (98), Expect = 2e-46 Identities = 258/310 (83%), Gaps = 1/310 (0%) Strand = Plus / Plus Query: 30 gataagcacgaaaat-aaagcttcgataaaaacggatacacccaatacgtcgaaactcat 88 ||||||||||||||| |||||||| |||||| | ||||| |||| ||| ||||||||||| Sbjct: 50055 gataagcacgaaaatgaaagcttctataaaagcagatacccccagtacatcgaaactcat 50114 Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 |||||| || || ||||| || ||||| |||||||||||||||||||| || |||||||| Sbjct: 50115 tgcccacggatacagaaaaacagtttcaacatcaaaaacaacaaaaactagagcaaacat 50174 Query: 149 ataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcata 208 |||||| || |||| ||||||| |||||| | || || ||||||||||| |||||||| Sbjct: 50175 ataataacggattctaaattgtaaccaagcatccccgatcggttctatacctgattcata 50234 Query: 209 actagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgc 268 ||||||||| ||||| || || | |||| || | ||||| || ||||| |||||| Sbjct: 50235 actagaaagtttctccggccccttcctaattggagataaaactccggaaattagaaatgc 50294 Query: 269 caaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattcgtgaag 328 ||||| ||||||| |||| ||||| || ||||| ||| |||||||||||||||| ||| Sbjct: 50295 caaaacaggaatagcacttgatattagtaaaaatgcccagaaaatatcatattcgtaaag 50354 Query: 329 cagaaacata 338 |||||||||| Sbjct: 50355 cagaaacata 50364
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 165 bits (83), Expect = 2e-37 Identities = 195/231 (84%), Gaps = 1/231 (0%) Strand = Plus / Minus Query: 128 aacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcccat 187 ||||||||| || |||||||||||||| || ||| | ||||||| |||||| | ||||| Sbjct: 101182 aacaaaaactagagcaaacatataataacggatttgaaattgtaaccaagcatcgcccat 101123 Query: 188 gggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaa 247 |||||||| || ||||||||||||||||| || ||||| |||| |||| || ||||| Sbjct: 101122 cggttctatcccagattcataactagaaagtttttctggcccttttctaattggagctaa 101063 Query: 248 aagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgtcca 307 || || |||||| |||||||||||||||||||| | | | |||||||||||||||||| Sbjct: 101062 aattccagaaatcagaaatgccaaaataggaataaagatcgatattattagaaatgtcca 101003 Query: 308 aaaaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtg 357 ||||||||||||||| | ||||| |||||| |||||||||| || |||||| Sbjct: 101002 aaaaatatcatattcataaagcaaaaacataaatgtactcctatgaatgtg 100952
>gb|M12704.1|MZECPPS2G Maize chloroplast psbG gene encoding PSII-G protein, complete cds Length = 1027 Score = 155 bits (78), Expect = 2e-34 Identities = 125/134 (93%), Gaps = 5/134 (3%) Strand = Plus / Minus Query: 8 tgcataaactaa-ccgacaactag-ataagcacgaaaat-aaagcttc-gataaaaacgg 63 |||||||||||| || |||||||| |||||||| ||||| |||||||| ||||||||||| Sbjct: 138 tgcataaactaaaccaacaactaggataagcacaaaaatgaaagcttccgataaaaacgg 79 Query: 64 atacacccaatacgtc-gaaactcattgcccaagggtatagaaagacggtttccacatca 122 |||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 78 atacacccaatacgtcagaaactcattgcccaagggtagagaaagactgtttccacatca 19 Query: 123 aaaacaacaaaaac 136 |||||||||||||| Sbjct: 18 aaaacaacaaaaac 5
>emb|CT863710.2| Medicago truncatula chromosome 5 clone mth2-52h19, COMPLETE SEQUENCE Length = 118754 Score = 129 bits (65), Expect = 1e-26 Identities = 144/169 (85%), Gaps = 1/169 (0%) Strand = Plus / Minus Query: 190 gttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaaaa 249 ||||||| || ||||||||||||||||| || ||||| |||| |||| || ||||||| Sbjct: 114622 gttctatcccagattcataactagaaagtttttctggcccttttctaattggagctaaaa 114563 Query: 250 gccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgtccaaa 309 || |||||| |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 114562 ttccagaaatcagaaatgccaaaataggaataaagatcgatattattagaaatgtccaaa 114503 Query: 310 aaatatcatattcgtgaagcagaaacat-aatgtactcccattaatgtg 357 ||||||||||||| | ||||| |||||| |||||||||| || |||||| Sbjct: 114502 aaatatcatattcataaagcaaaaacataaatgtactcctatgaatgtg 114454
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 188 gggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaa 247 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 35298991 gggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagctaa 35298932 Query: 248 aa 249 || Sbjct: 35298931 aa 35298930
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 188 gggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaa 247 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 35389063 gggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagctaa 35389004 Query: 248 aa 249 || Sbjct: 35389003 aa 35389002
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete sequence Length = 116443 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 188 gggttctatacccgattcataactagaaagcttctctggtccttcactaaccggggctaa 247 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 69463 gggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagctaa 69522 Query: 248 aa 249 || Sbjct: 69523 aa 69524
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 101 bits (51), Expect = 2e-18 Identities = 126/151 (83%) Strand = Plus / Minus Query: 81 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 140 |||||||| ||||| || |||| ||| || ||||| |||||||||| ||||||||| | | Sbjct: 29693 aaactcatggcccatggatataaaaaaactgtttctacatcaaaaataacaaaaactaac 29634 Query: 141 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 200 || |||||||||||||| ||| ||||||| | |||||| | ||||| |||||||| || Sbjct: 29633 gcgaacatataatagcgaatttggaattgaatccaagcatcacccattggttctattcct 29574 Query: 201 gattcataactagaaagcttctctggtcctt 231 ||||||||||||| || || |||||||||| Sbjct: 29573 gattcataactagttagtttttctggtcctt 29543
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 89.7 bits (45), Expect = 9e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 402 atttatccagaacttctctcttttcctcggtgaaacaagaatcttttttgttcaaac 458 |||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 486770 atttctccagaacttctctcttttcctcggtgaaacaagaatctcttttgctcaaac 486826 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tgggttctatacccgattca 206 |||||||||||||||||||| Sbjct: 394098 tgggttctatacccgattca 394117
>dbj|AB087446.1| Anthoceros formosae chloroplast ndhK, ndhC mRNA for NADH dehydrogenase 27 kDa subunit, NADH dehydrogenase ND3 subunit, partial and complete cds Length = 443 Score = 89.7 bits (45), Expect = 9e-15 Identities = 129/157 (82%) Strand = Plus / Plus Query: 81 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 140 |||||||| ||||| || || ||||| || ||||| |||||||||| ||| ||||| | Sbjct: 185 aaactcatagcccatggatagagaaaaacagtttcaacatcaaaaataacgaaaactaaa 244 Query: 141 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 200 |||||||||||||| || ||| | ||||| | |||||| ||||||| ||||||||||| Sbjct: 245 gcaaacatataataacgaatttgaaattgaatccaagcatctcccataggttctatacca 304 Query: 201 gattcataactagaaagcttctctggtccttcactaa 237 |||||||||||| || || |||||||||| ||||| Sbjct: 305 cattcataactagtaaatttttctggtcctttactaa 341
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 81 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 140 |||||||| |||||||| || ||||| || ||||| |||||||||| |||||||| | Sbjct: 52621 aaactcatagcccaaggataaagaaaaactgtttctacatcaaaaattacaaaaactaaa 52680 Query: 141 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 200 |||||||||||||| || ||| | ||||| | ||||| ||||||| ||||||||||| Sbjct: 52681 gcaaacatataatatcgaatttgaaattgaatacaagcttctcccatcggttctatacct 52740 Query: 201 gattcataact 211 ||||||||||| Sbjct: 52741 gattcataact 52751
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 73.8 bits (37), Expect = 5e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 81 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 140 |||||||| ||||| || || ||| | || ||||| |||||||||| ||| ||||| | Sbjct: 68028 aaactcatagcccatggatagagagaaacagtttcaacatcaaaaataacgaaaactaaa 68087 Query: 141 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 200 |||||||||||||| || ||| ||||| | |||||| ||||||| ||||||||||| Sbjct: 68088 gcaaacatataataacgaatttaaaattggatccaagcatctcccataggttctatacca 68147 Query: 201 gattcataactagaaagcttctctggtccttcactaa 237 |||||||||||| || || |||||||||| ||||| Sbjct: 68148 cattcataactagtaaatttttctggtcctttactaa 68184
>dbj|D43695.1|APNCPRBCLA Anthoceros formosae chloroplast DNA for ndhK, atpB, accD, partial cds, and ndhC, atpE, rbcL, complete cds Length = 7556 Score = 73.8 bits (37), Expect = 5e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 81 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 140 |||||||| ||||| || || ||| | || ||||| |||||||||| ||| ||||| | Sbjct: 339 aaactcatagcccatggatagagagaaacagtttcaacatcaaaaataacgaaaactaaa 398 Query: 141 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 200 |||||||||||||| || ||| ||||| | |||||| ||||||| ||||||||||| Sbjct: 399 gcaaacatataataacgaatttaaaattgaatccaagcatctcccataggttctatacca 458 Query: 201 gattcataactagaaagcttctctggtccttcactaa 237 |||||||||||| || || |||||||||| ||||| Sbjct: 459 cattcataactagtaaatttttctggtcctttactaa 495
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 67.9 bits (34), Expect = 3e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 84 ctcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgca 143 ||||| ||||| ||||| || || || ||||| || ||||| |||||||| || | ||| Sbjct: 108886 ctcatagcccatgggtaaaggaatacagtttctacgtcaaatacaacaaacactaaggca 108945 Query: 144 aacatataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgat 203 ||||||||||| || ||| ||||||||| ||||| | ||||| ||||||||||| || Sbjct: 108946 aacatataataacgaatttggaattgtatccaagattcgcccataggttctatacctgac 109005 Query: 204 tcataactag 213 |||||||||| Sbjct: 109006 tcataactag 109015
>gb|AC155886.2| Medicago truncatula chromosome 7 BAC clone mth2-173o24, complete sequence Length = 119696 Score = 67.9 bits (34), Expect = 3e-08 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand = Plus / Minus Query: 263 aaatgccaaaataggaataaggcttgctattattagaaatgtccaaaaaatatcatattc 322 |||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||| Sbjct: 37643 aaatgccaaaatagcaataacaattgatattattagaaatacccaaaaaatatcatattt 37584 Query: 323 gtgaagcagaaacat-aatgtactcc 347 || ||| | |||||| |||||||||| Sbjct: 37583 gtaaagaaaaaacataaatgtactcc 37558
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 63.9 bits (32), Expect = 5e-07 Identities = 98/120 (81%) Strand = Plus / Plus Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 |||||| || || ||||| || ||||| |||||||||| ||| ||||| || |||||||| Sbjct: 316694 tgcccatggataaagaaatactgtttcaacatcaaaaataacgaaaactagggcaaacat 316753 Query: 149 ataatagcgtattcggaattgtacccaagcccctcccatgggttctatacccgattcata 208 |||||||| || ||||| | |||||||||||| |||||||| || || |||||||| Sbjct: 316754 gtaatagcgaatattaaattgaatccaagcccctccaatgggttccatcccagattcata 316813
>gb|U72654.1|EGU72654 Eustoma grandiflorum flavonoid 3'5'-hydroxylase (F3'5'H) mRNA, complete cds Length = 2124 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 290 tattattagaaatgtccaaaaaatatcatattcgtgaagcagaaacat 337 ||||||||||||||||||||||| |||||||| || || ||||||||| Sbjct: 2032 tattattagaaatgtccaaaaaaaatcatatttgtaaatcagaaacat 1985
>dbj|D14589.1| Eustoma russellianum mRNA for flavonoid 3',5'-hydroxylase, complete cds Length = 2174 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 290 tattattagaaatgtccaaaaaatatcatattcgtgaagcagaaacat 337 ||||||||||||||||||||||| |||||||| || || ||||||||| Sbjct: 2029 tattattagaaatgtccaaaaaaaatcatatttgtaaatcagaaacat 1982 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 189 ggttctatacccgattcataactagaaagcttctctggtcctt 231 |||||||| ||||||||||||||||| || || |||||||||| Sbjct: 2130 ggttctatccccgattcataactagacagtttttctggtcctt 2088
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 141 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 200 |||||||||||||| || || ||||||| | |||||| |||| |||||||||||||| Sbjct: 37855 gcaaacatataataacgaatctggaattggatccaagcgtctccaatgggttctatacct 37796 Query: 201 gattcataactagaaagcttctctggtcctt 231 |||||||| || | || ||| |||||||||| Sbjct: 37795 gattcatagcttgtaaacttttctggtcctt 37765
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 131 aaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagcccctcccatggg 190 |||||| || |||||||| ||||||| |||||||||| ||||||||| | ||||| || Sbjct: 51110 aaaaactagagcaaacatttaatagcaaattcggaattttacccaagcatcccccattgg 51169 Query: 191 ttctatacccgattcataactag 213 ||| |||| ||||||||||||| Sbjct: 51170 ctctctacctgattcataactag 51192 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 290 tattattagaaatgtccaaaaaatatcatattcgtgaagcagaaacataa 339 |||||||| ||||| ||| |||| |||||||||||||| ||||||||||| Sbjct: 51264 tattattataaatgcccagaaaagatcatattcgtgaaacagaaacataa 51313
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 56.0 bits (28), Expect = 1e-04 Identities = 142/180 (78%) Strand = Plus / Plus Query: 81 aaactcattgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagc 140 |||||||| ||||| || || ||||| || ||||| |||||||||| ||| ||||| | Sbjct: 51896 aaactcatagcccatggataaagaaaaaccgtttcaacatcaaaaataacgaaaactaaa 51955 Query: 141 gcaaacatataatagcgtattcggaattgtacccaagcccctcccatgggttctataccc 200 ||||| |||| || || || | ||||||| |||||| | ||||| ||||||||||| Sbjct: 51956 gcaaagctatagtaacggatctgaaattgtatccaagcatcccccattggttctatacct 52015 Query: 201 gattcataactagaaagcttctctggtccttcactaaccggggctaaaagccctgaaatc 260 ||||||||||| | | || || ||||| | ||||||||| |||||||| | ||||||| Sbjct: 52016 gattcataactggtcattttttcaggtcccttactaaccggtgctaaaagtcgtgaaatc 52075
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 54.0 bits (27), Expect = 5e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 111 gtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgt 170 ||||| |||||||||| |||||||| | |||||||||||||| || ||| |||| ||| Sbjct: 37563 gtttctacatcaaaaatcacaaaaactaaagcaaacatataataacgaatttggaactgt 37622 Query: 171 acccaagcccctcccatgggttctatacccgattcataa 209 | ||||| ||||||| ||||| || || ||||||||| Sbjct: 37623 atccaagattctcccattggttcaattcctgattcataa 37661
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 ||||||||| |||||||| | ||||| |||||||| |||||||| || || |||||||| Sbjct: 59941 tgcccaaggatatagaaacaaagtttcgacatcaaatacaacaaatactagtgcaaacat 60000 Query: 149 ata 151 ||| Sbjct: 60001 ata 60003
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 46.1 bits (23), Expect = 0.12 Identities = 80/99 (80%) Strand = Plus / Plus Query: 111 gtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgt 170 ||||| |||||||||| ||||||| | |||||||||||||| ||||| |||||| Sbjct: 58063 gtttctacatcaaaaattacaaaaattaaagcaaacatataataacgtatgttgaattgg 58122 Query: 171 acccaagcccctcccatgggttctatacccgattcataa 209 |||||||| | ||||| ||||| || || ||||||||| Sbjct: 58123 acccaagcttcacccattggttcaattcctgattcataa 58161
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Minus Query: 117 acatcaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 171 |||||||||| |||||||| || |||||||||||||| || ||| | ||||||| Sbjct: 58525 acatcaaaaataacaaaaaatagagcaaacatataataacggatttgaaattgta 58471
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 tagcgtattcggaattgtacccaagc 178 ||||||||||||||||||| |||||| Sbjct: 443617 tagcgtattcggaattgtaaccaagc 443642 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 tagcgtattcggaattgtacccaagc 178 ||||||||||||||||||| |||||| Sbjct: 362504 tagcgtattcggaattgtaaccaagc 362529 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 58 aaacggatacacccaatacgtcgaaactcattgccca 94 ||||||| || |||||||| |||||||||||| |||| Sbjct: 443543 aaacggaaacgcccaatacatcgaaactcattaccca 443579 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 58 aaacggatacacccaatacgtcgaaactcattgccca 94 ||||||| || |||||||| |||||||||||| |||| Sbjct: 362430 aaacggaaacgcccaatacatcgaaactcattaccca 362466
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 tagcgtattcggaattgtacccaagc 178 ||||||||||||||||||| |||||| Sbjct: 442775 tagcgtattcggaattgtaaccaagc 442800 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 tagcgtattcggaattgtacccaagc 178 ||||||||||||||||||| |||||| Sbjct: 361677 tagcgtattcggaattgtaaccaagc 361702 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 58 aaacggatacacccaatacgtcgaaactcattgccca 94 ||||||| || |||||||| |||||||||||| |||| Sbjct: 442701 aaacggaaacgcccaatacatcgaaactcattaccca 442737 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 58 aaacggatacacccaatacgtcgaaactcattgccca 94 ||||||| || |||||||| |||||||||||| |||| Sbjct: 361603 aaacggaaacgcccaatacatcgaaactcattaccca 361639
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 tagcgtattcggaattgtacccaagc 178 ||||||||||||||||||| |||||| Sbjct: 442771 tagcgtattcggaattgtaaccaagc 442796 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 tagcgtattcggaattgtacccaagc 178 ||||||||||||||||||| |||||| Sbjct: 361673 tagcgtattcggaattgtaaccaagc 361698 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 58 aaacggatacacccaatacgtcgaaactcattgccca 94 ||||||| || |||||||| |||||||||||| |||| Sbjct: 442697 aaacggaaacgcccaatacatcgaaactcattaccca 442733 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 58 aaacggatacacccaatacgtcgaaactcattgccca 94 ||||||| || |||||||| |||||||||||| |||| Sbjct: 361599 aaacggaaacgcccaatacatcgaaactcattaccca 361635
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Minus Query: 104 aaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcg 157 |||||| || ||||||||||||| ||||| ||||| |||||||| || ||||| Sbjct: 1491650 aaagaccgtctccacatcaaaaatgacaaagacgagggcaaacatgtagtagcg 1491597
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 117 acatcaaaaacaacaaaaacgagcgcaaacatataata 154 |||||||||| ||||||||| | |||||||||||||| Sbjct: 47135 acatcaaaaataacaaaaactaaagcaaacatataata 47172
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 tagcgtattcggaattgtacccaagc 178 ||||||||||||||||||| |||||| Sbjct: 442628 tagcgtattcggaattgtaaccaagc 442653 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 tagcgtattcggaattgtacccaagc 178 ||||||||||||||||||| |||||| Sbjct: 361541 tagcgtattcggaattgtaaccaagc 361566 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 58 aaacggatacacccaatacgtcgaaactcattgccca 94 ||||||| || |||||||| |||||||||||| |||| Sbjct: 442554 aaacggaaacgcccaatacatcgaaactcattaccca 442590 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 58 aaacggatacacccaatacgtcgaaactcattgccca 94 ||||||| || |||||||| |||||||||||| |||| Sbjct: 361467 aaacggaaacgcccaatacatcgaaactcattaccca 361503
>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01, complete sequence Length = 122768 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 agaatcttttttgttcaaaca 459 ||||||||||||||||||||| Sbjct: 116091 agaatcttttttgttcaaaca 116111
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 42.1 bits (21), Expect = 1.9 Identities = 57/69 (82%) Strand = Plus / Minus Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 ||||||||| |||| || || || ||||||||||| || ||||| || || |||||||| Sbjct: 2312630 tgcccaaggatataagaacacagtctccacatcaaagacgacaaagaccagggcaaacat 2312571 Query: 149 ataatagcg 157 ||| ||||| Sbjct: 2312570 atagtagcg 2312562
>gb|AY120853.2| Synechococcus sp. PCC 7942 processing protease-like protein gene, partial cds; phycocyanobilin:ferredoxin oxidoreductase-like protein, DevB (devB), DevC (devC), tRNA pseudoridine 55 synthase, CheY (cheY), 50S ribosomal protein L27, 50S ribosomal protein L21, KaiA (kaiA), KaiB (kaiB), KaiC (kaiC), glutathione peroxidase, virulence associated protein C, rRNA methylase-like protein, PhdD (phdD), indole-3-glycerol phosphate synthase-like protein, PdxJ (pdxJ), KguA (kguA), AmpA (ampA), MobA (mobA), transferrin variant A-like protein, 6-pyruvoyl-tetrahydropterin synthase-like protein, NugC (nugC), NdhK (ndhK), Nu3C (nu3C), RubR (rubR), PsbE (psbE), PsbF (psbF), PsbL (psbL), PsbJ (psbJ), apolipoprotein N-acyltransferase-like protein, unknown protein, IspF (ispF), Ap-4-A phosphorylase II-like protein, PanC (panC), Kcy (kcy), and dTDP-glucose 4-6-dehydratase-like protein genes, complete cds; and unknown genes Length = 74355 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 105 aagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcg 157 ||||||||||| |||||||| | || || |||||||||||||| || ||||| Sbjct: 35711 aagacggtttctacatcaaagatcacgaatacgagcgcaaacatgtagtagcg 35763
>emb|AJ884786.1| Gigaspora margarita transposon GmarRT1-like sequence, clone GmarRT1-d Length = 769 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 400 caatttatccagaacttctct 420 ||||||||||||||||||||| Sbjct: 521 caatttatccagaacttctct 541
>emb|AJ884784.1| Gigaspora margarita transposon GmarRT1-like sequence, clone GmarRT1b Length = 752 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 400 caatttatccagaacttctct 420 ||||||||||||||||||||| Sbjct: 521 caatttatccagaacttctct 541
>emb|CR847884.6| Zebrafish DNA sequence from clone CH211-161H23 in linkage group 1, complete sequence Length = 157311 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 432 tgaaacaagaatcttttttgttcaaacaa 460 |||||||| ||||||||||||||| |||| Sbjct: 74418 tgaaacaaaaatcttttttgttcatacaa 74390
>emb|AJ012181.1|AVA012181 Anabaena variabilis hoxR gene and ndhCKJ gene cluster Length = 3020 Score = 42.1 bits (21), Expect = 1.9 Identities = 57/69 (82%) Strand = Plus / Minus Query: 89 tgcccaagggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacat 148 ||||||||| |||| || || || ||||||||||| || ||||| || || |||||||| Sbjct: 1347 tgcccaaggatataagaacacagtctccacatcaaagacgacaaagaccagggcaaacat 1288 Query: 149 ataatagcg 157 ||| ||||| Sbjct: 1287 atagtagcg 1279
>emb|BX908805.1| Human DNA sequence from clone RP11-526F14 on chromosome 1 Contains part of the DPYD gene for dihydropyrimidine dehydrogenase and the 3' end of a novel gene, complete sequence Length = 59492 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 aatttatccagaacttctctctttt 425 |||||||||||||||||||| |||| Sbjct: 51481 aatttatccagaacttctctttttt 51457
>emb|AL512385.10| Human DNA sequence from clone RP11-252E3 on chromosome 6 Contains part of the gene KIAA0319 and a keratin 8 (KRT8) pseudogene, complete sequence Length = 28692 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 tagtcaattcaattcagcatt 397 ||||||||||||||||||||| Sbjct: 11478 tagtcaattcaattcagcatt 11498
>emb|CR942205.4| Human DNA sequence from clone RP11-948M1 on chromosome 6, complete sequence Length = 176819 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tagtcaattcaattcagcatt 397 ||||||||||||||||||||| Sbjct: 93954 tagtcaattcaattcagcatt 93934
>emb|CR925830.3| Human DNA sequence from clone RP11-195J19 on chromosome 6, complete sequence Length = 167847 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tagtcaattcaattcagcatt 397 ||||||||||||||||||||| Sbjct: 99979 tagtcaattcaattcagcatt 99959
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 105 aagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcg 157 ||||||||||| |||||||| | || || |||||||||||||| || ||||| Sbjct: 408832 aagacggtttctacatcaaagatcacgaatacgagcgcaaacatgtagtagcg 408884
>gb|AC021393.10| Homo sapiens chromosome 8, clone RP11-27P7, complete sequence Length = 150858 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 292 ttattagaaatgtccaaaaaatatcatat 320 ||||||| |||||||| |||||||||||| Sbjct: 30476 ttattagtaatgtccataaaatatcatat 30448
>gb|BC068355.1| Danio rerio zgc:85677, mRNA (cDNA clone MGC:85677 IMAGE:6961081), complete cds Length = 2201 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 cacatcaaaaacaacaaaaac 136 ||||||||||||||||||||| Sbjct: 1550 cacatcaaaaacaacaaaaac 1530
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 acatcaaaaacaacaaaaacg 137 ||||||||||||||||||||| Sbjct: 5414380 acatcaaaaacaacaaaaacg 5414400 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 acatcaaaaacaacaaaaacg 137 ||||||||||||||||||||| Sbjct: 5414354 acatcaaaaacaacaaaaacg 5414374 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 acatcaaaaacaacaaaaacg 137 ||||||||||||||||||||| Sbjct: 5414328 acatcaaaaacaacaaaaacg 5414348 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 catcaaaaacaacaaaaacg 137 |||||||||||||||||||| Sbjct: 5414580 catcaaaaacaacaaaaacg 5414599
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 agaatcttttttgttcaaaca 459 ||||||||||||||||||||| Sbjct: 1160480 agaatcttttttgttcaaaca 1160500
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416D03 Length = 157112 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 58 aaacggatacacccaatacgtcgaaactcattgccca 94 ||||||| || |||||||| |||||||||||| |||| Sbjct: 78261 aaacggaaacgcccaatacatcgaaactcattaccca 78297
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 tttccacatcaaaaacaacaa 132 ||||||||||||||||||||| Sbjct: 4865735 tttccacatcaaaaacaacaa 4865755
>emb|AL732646.5|CNS08C9L Oryza sativa chromosome 12, . BAC OSJNBb0001P17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151024 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 374 aattagtcaattcaattcagcattgtcaatttatccagaacttctctcttttc 426 ||||| ||||||||| ||| || ||||||||||| || || |||| ||||||| Sbjct: 148763 aattaatcaattcaagtcaacactgtcaatttatacataagttctatcttttc 148711
>emb|AL731786.3|CNS08C8A Oryza sativa chromosome 12, . BAC OSJNBa0010J13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146055 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 374 aattagtcaattcaattcagcattgtcaatttatccagaacttctctcttttc 426 ||||| ||||||||| ||| || ||||||||||| || || |||| ||||||| Sbjct: 60359 aattaatcaattcaagtcaacactgtcaatttatacataagttctatcttttc 60307
>emb|AL513424.3|HS109M15 Homo sapiens chromosome 9 BAC RP11-109M15, complete sequence Length = 184365 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 attcagcattgtcaatttatc 408 ||||||||||||||||||||| Sbjct: 126091 attcagcattgtcaatttatc 126071
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 gctgcatcttctttaaagatt 512 ||||||||||||||||||||| Sbjct: 14531 gctgcatcttctttaaagatt 14551
>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02, complete sequence Length = 90509 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 agaatcttttttgttcaaaca 459 ||||||||||||||||||||| Sbjct: 10766 agaatcttttttgttcaaaca 10786
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 105 aagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagcg 157 ||||||||||| |||||||| | || || |||||||||||||| || ||||| Sbjct: 1211974 aagacggtttctacatcaaagatcacgaatacgagcgcaaacatgtagtagcg 1211922
>dbj|D13112.1|RICMT16 Oryza sativa (japonica cultivar-group) mitochondrial gene for tRNAs, complete sequences Length = 4894 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 58 aaacggatacacccaatacgtcgaaactcattgccca 94 ||||||| || |||||||| |||||||||||| |||| Sbjct: 4758 aaacggaaacgcccaatacatcgaaactcattaccca 4794
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tgggttctatacccgattca 206 |||||||||||||||||||| Sbjct: 101322 tgggttctatacccgattca 101341
>gb|DQ205647.1| Eimeria tenella calmodulin-like domain protein kinase isoform 2 mRNA, complete cds Length = 2187 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cttcgataaaaacggataca 68 |||||||||||||||||||| Sbjct: 1710 cttcgataaaaacggataca 1729
>gb|AC124323.10| Mus musculus chromosome 19, clone RP24-444B6, complete sequence Length = 150803 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 aagaatcttttttgttcaaa 457 |||||||||||||||||||| Sbjct: 61745 aagaatcttttttgttcaaa 61726
>gb|AC102999.7| Rattus norvegicus 7 BAC CH230-33J22 (Children's Hospital Oakland Research Institute) complete sequence Length = 209654 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 tttagcctttgtttcctctgtgct 494 ||||||||||||||||| |||||| Sbjct: 143408 tttagcctttgtttcctgtgtgct 143431
>gb|AC140351.2| Mus musculus BAC clone RP24-258E8 from chromosome 8, complete sequence Length = 167073 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 acatcaaaaacaacaaaaac 136 |||||||||||||||||||| Sbjct: 150873 acatcaaaaacaacaaaaac 150892
>gb|AC147648.4| Homo sapiens BAC clone RP11-1413M17 from UL, complete sequence Length = 188992 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 aaatgtccaaaaaatatcatattc 322 |||||||||||||||||| ||||| Sbjct: 181830 aaatgtccaaaaaatatcttattc 181807
>ref|XM_716710.1| Candida albicans SC5314 putative U3 snoRNP protein Utp20p fragment (CaO19_1732), mRNA Length = 1863 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 aacttaaattagtcaattca 387 |||||||||||||||||||| Sbjct: 1615 aacttaaattagtcaattca 1596
>ref|XM_716590.1| Candida albicans SC5314 putative U3 snoRNP protein Utp20p fragment (CaO19_9300), mRNA Length = 1863 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 aacttaaattagtcaattca 387 |||||||||||||||||||| Sbjct: 1615 aacttaaattagtcaattca 1596
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgggttctatacccgattca 206 |||||||||||||||||||| Sbjct: 356188 tgggttctatacccgattca 356169
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tgggttctatacccgattca 206 |||||||||||||||||||| Sbjct: 139487 tgggttctatacccgattca 139506
>gb|AC145613.2| Homo sapiens BAC clone RP11-1266H24 from UL, complete sequence Length = 178925 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 aaatgtccaaaaaatatcatattc 322 |||||||||||||||||| ||||| Sbjct: 159027 aaatgtccaaaaaatatcttattc 159004
>gb|AC145616.2| Homo sapiens BAC clone RP11-1172A19 from UL, complete sequence Length = 172810 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 aaatgtccaaaaaatatcatattc 322 |||||||||||||||||| ||||| Sbjct: 19997 aaatgtccaaaaaatatcttattc 20020
>gb|AF511566.1| Pennisetum glaucum mitochondrial gene sequence Length = 927 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tgggttctatacccgattca 206 |||||||||||||||||||| Sbjct: 87 tgggttctatacccgattca 106
>gb|AC005550.1| Homo sapiens PAC clone RP4-620P6 from 7, complete sequence Length = 133237 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 ttctttaaagattcatccaa 519 |||||||||||||||||||| Sbjct: 26941 ttctttaaagattcatccaa 26960
>gb|AC145547.3| Homo sapiens BAC clone RP11-1437O6 from UL, complete sequence Length = 185637 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 aaatgtccaaaaaatatcatattc 322 |||||||||||||||||| ||||| Sbjct: 92547 aaatgtccaaaaaatatcttattc 92570
>gb|AC144916.3| Homo sapiens BAC clone RP11-15L7 from UL, complete sequence Length = 158759 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 aaatgtccaaaaaatatcatattc 322 |||||||||||||||||| ||||| Sbjct: 127308 aaatgtccaaaaaatatcttattc 127331
>gb|AC087428.3| Homo sapiens chromosome 3 clone RP11-18I13 map 3p, complete sequence Length = 149633 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 aaatgtccaaaaaatatcatattc 322 |||||||||||||||||| ||||| Sbjct: 130846 aaatgtccaaaaaatatcttattc 130823
>emb|AL356099.15| Human DNA sequence from clone RP11-357A18 on chromosome 10, complete sequence Length = 163152 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ttaaattagtcaattcaatt 390 |||||||||||||||||||| Sbjct: 100171 ttaaattagtcaattcaatt 100152
>emb|AL133326.10| Human DNA sequence from clone RP3-398D13 on chromosome 6p24.3-25.3 Contains the 5' end of the F13A1 gene for coagulation factor XIII A chain precursor, a SNAP19 (sRNA activating protein complex 19kDa subunit) pseudogene and two putative novel gene, complete sequence Length = 147038 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 ttctttaaagattcatccaa 519 |||||||||||||||||||| Sbjct: 67301 ttctttaaagattcatccaa 67320
>gb|AC046170.6| Homo sapiens chromosome 17, clone RP11-219F9, complete sequence Length = 198470 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 cacatcaaaaacaacaaaaa 135 |||||||||||||||||||| Sbjct: 16919 cacatcaaaaacaacaaaaa 16900
>emb|CR381572.5| Human DNA sequence from clone bP-2168N6 on chromosome 21, complete sequence Length = 184355 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 aaatgtccaaaaaatatcatattc 322 |||||||||||||||||| ||||| Sbjct: 126224 aaatgtccaaaaaatatcttattc 126247
>gb|AC026391.7| Homo sapiens chromosome 10 clone RP11-135D11, complete sequence Length = 177578 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 ttaaattagtcaattcaatt 390 |||||||||||||||||||| Sbjct: 174066 ttaaattagtcaattcaatt 174085
>gb|AC160561.2| Mus musculus BAC clone RP23-102D22 from chromosome 12, complete sequence Length = 204231 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 acatcaaaaacaacaaaaac 136 |||||||||||||||||||| Sbjct: 65777 acatcaaaaacaacaaaaac 65796
>gb|AC012613.7| Homo sapiens chromosome 5 clone CTB-162I23, complete sequence Length = 164550 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 ttgtacccaagcccctcccatggg 190 |||| ||||||||||||||||||| Sbjct: 114434 ttgttcccaagcccctcccatggg 114457
>gb|AF418272.1|AF418272 Homo sapiens coagulation factor XIII, A1 polypeptide (F13A1) gene, complete cds Length = 178952 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 ttctttaaagattcatccaa 519 |||||||||||||||||||| Sbjct: 31497 ttctttaaagattcatccaa 31478
>gb|AC158130.7| Mus musculus chromosome 19, clone RP24-360F11, complete sequence Length = 206879 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 aagaatcttttttgttcaaa 457 |||||||||||||||||||| Sbjct: 200185 aagaatcttttttgttcaaa 200166
>gb|AC139026.4| Homo sapiens chromosome 17, clone CTD-2514I13, complete sequence Length = 226696 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cacatcaaaaacaacaaaaa 135 |||||||||||||||||||| Sbjct: 63811 cacatcaaaaacaacaaaaa 63830
>emb|BX813561.1|CNS0ADQ3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB24ZE12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1409 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ttgctattattagaaatgtc 305 |||||||||||||||||||| Sbjct: 630 ttgctattattagaaatgtc 649
>emb|BX813717.1|CNS0ADTC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1323 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ttgctattattagaaatgtc 305 |||||||||||||||||||| Sbjct: 541 ttgctattattagaaatgtc 560
>emb|BX816565.1|CNS0AAP2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZA11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1375 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ttgctattattagaaatgtc 305 |||||||||||||||||||| Sbjct: 591 ttgctattattagaaatgtc 610
>gb|AC152168.2| Mus musculus BAC clone RP23-96H18 from chromosome 8, complete sequence Length = 219434 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 acatcaaaaacaacaaaaac 136 |||||||||||||||||||| Sbjct: 129047 acatcaaaaacaacaaaaac 129066
>gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana BAC F22O13 from chromosome I, complete sequence Length = 133843 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 ttgctattattagaaatgtc 305 |||||||||||||||||||| Sbjct: 47914 ttgctattattagaaatgtc 47895
>gb|AC138645.3| Homo sapiens chromosome 17, clone RP11-995C19, complete sequence Length = 200420 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 cacatcaaaaacaacaaaaa 135 |||||||||||||||||||| Sbjct: 184483 cacatcaaaaacaacaaaaa 184464
>dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1029_F04 Length = 141834 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 aattagtcaattcaattcagcatt 397 ||||||||||||||| |||||||| Sbjct: 46140 aattagtcaattcaagtcagcatt 46163
>gb|AC135972.11| Homo sapiens chromosome 17, clone CTD-2530H17, complete sequence Length = 158617 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 cacatcaaaaacaacaaaaa 135 |||||||||||||||||||| Sbjct: 78226 cacatcaaaaacaacaaaaa 78207
>gb|AC004098.1|AC004098 Homo sapiens chromosome 17, clone HCIT305D20, complete sequence Length = 166978 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 cacatcaaaaacaacaaaaa 135 |||||||||||||||||||| Sbjct: 15895 cacatcaaaaacaacaaaaa 15876
>emb|BX546448.4| Human DNA sequence from clone RP11-509J10 on chromosome 22, complete sequence Length = 172149 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 aaatgtccaaaaaatatcatattc 322 |||||||||||||||||| ||||| Sbjct: 56533 aaatgtccaaaaaatatcttattc 56510
>dbj|AB159445.1| Bombyx mori DNA, chromosome 2, clone:544H24, complete sequence Length = 205107 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 ttaaattagtcaattcaatt 390 |||||||||||||||||||| Sbjct: 58142 ttaaattagtcaattcaatt 58161
>dbj|AB025608.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K14B15 Length = 83689 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 atacccgattcataactaga 214 |||||||||||||||||||| Sbjct: 60785 atacccgattcataactaga 60766
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tgggttctatacccgattca 206 |||||||||||||||||||| Sbjct: 212508 tgggttctatacccgattca 212489
>gb|AC087431.3| Homo sapiens chromosome 3 clone RP11-775C23 map 3p, complete sequence Length = 196745 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 aaatgtccaaaaaatatcatattc 322 |||||||||||||||||| ||||| Sbjct: 13043 aaatgtccaaaaaatatcttattc 13020
>emb|X69720.1|MITANAD9 T.aestivum mitochondrial nad9 gene for 30 kDa subunit of complex I NADH dehydrogenase Length = 935 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tgggttctatacccgattca 206 |||||||||||||||||||| Sbjct: 87 tgggttctatacccgattca 106
>gb|AC092956.5| Homo sapiens 3 BAC RP11-648O5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194510 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cacatcaaaaacaacaaaaa 135 |||||||||||||||||||| Sbjct: 176269 cacatcaaaaacaacaaaaa 176288 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,127,839 Number of Sequences: 3902068 Number of extensions: 6127839 Number of successful extensions: 142976 Number of sequences better than 10.0: 168 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 141588 Number of HSP's gapped (non-prelim): 1231 length of query: 542 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 519 effective length of database: 17,143,297,704 effective search space: 8897371508376 effective search space used: 8897371508376 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
