>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  379 bits (191), Expect = e-102
 Identities = 340/389 (87%), Gaps = 3/389 (0%)
 Strand = Plus / Minus

                                                                           
Query: 254     tcatatggcgtatatccggtctatctcggaatctga---ctccgagttgtggttccatga 310
               |||||||||||||||||||||||||||||| |||||   ||| ||||| || | ||||||
Sbjct: 9579958 tcatatggcgtatatccggtctatctcggagtctgaaaactctgagttttgctgccatga 9579899

                                                                           
Query: 311     gtttgagccgctccgccttgttgatttcaccttcttcctaattgaacgtgtgcgcttgga 370
               ||||||||| |||| |||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 9579898 gtttgagccactcctccttgtagatttcaccttcttcctgatcgaacgtgtgcgcttgga 9579839

                                                                           
Query: 371     cttcaccacatagtatgtcatcgtaccgagcacgccagccatgatcaccccaccaatgag 430
                 ||||||||||||| ||||| ||||| ||||| |||||||||||||| || || || ||
Sbjct: 9579838 tctcaccacatagtaggtcattgtaccaagcacaccagccatgatcactccgccgattag 9579779

                                                                           
Query: 431     ggtcaccagaagcgccgcccacctgaagtgccgacccaccactatgtaagaggaggatat 490
               ||||||||||||||||||||||  |||||||   || || || || |||| ||| |||||
Sbjct: 9579778 ggtcaccagaagcgccgcccactggaagtgcttcccaactacaatataagcggatgatat 9579719

                                                                           
Query: 491     gaatgccaccgtggtgcataccgaagccagccacatcaacttgttgataacctccacaac 550
               ||| ||||| || ||||| || |||||||||||||||||||| ||||||| ||| || ||
Sbjct: 9579718 gaacgccactgtagtgcacacagaagccagccacatcaacttattgataatctctactac 9579659

                                                                           
Query: 551     tcgcctctctgctttcgtctcgcccctaacaagtgttatctggaccaccactactgctaa 610
                |||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 9579658 ccgcctctctgctttagtctctcccctaacaagtgtaatctgaaccaccactactgctaa 9579599

                                            
Query: 611     tgatgtgaacaaggcgatggcattgaaga 639
               ||||||||||||||| |||||||||||||
Sbjct: 9579598 tgatgtgaacaaggcaatggcattgaaga 9579570



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 95      acaccagcttattggaatgtatac 118
               ||||||||||||||||| ||||||
Sbjct: 9580098 acaccagcttattggaacgtatac 9580075

>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence,
           complete sequence
          Length = 165113

 Score =  379 bits (191), Expect = e-102
 Identities = 340/389 (87%), Gaps = 3/389 (0%)
 Strand = Plus / Minus

                                                                       
Query: 254 tcatatggcgtatatccggtctatctcggaatctga---ctccgagttgtggttccatga 310
           |||||||||||||||||||||||||||||| |||||   ||| ||||| || | ||||||
Sbjct: 857 tcatatggcgtatatccggtctatctcggagtctgaaaactctgagttttgctgccatga 798

                                                                       
Query: 311 gtttgagccgctccgccttgttgatttcaccttcttcctaattgaacgtgtgcgcttgga 370
           ||||||||| |||| |||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 797 gtttgagccactcctccttgtagatttcaccttcttcctgatcgaacgtgtgcgcttgga 738

                                                                       
Query: 371 cttcaccacatagtatgtcatcgtaccgagcacgccagccatgatcaccccaccaatgag 430
             ||||||||||||| ||||| ||||| ||||| |||||||||||||| || || || ||
Sbjct: 737 tctcaccacatagtaggtcattgtaccaagcacaccagccatgatcactccgccgattag 678

                                                                       
Query: 431 ggtcaccagaagcgccgcccacctgaagtgccgacccaccactatgtaagaggaggatat 490
           ||||||||||||||||||||||  |||||||   || || || || |||| ||| |||||
Sbjct: 677 ggtcaccagaagcgccgcccactggaagtgcttcccaactacaatataagcggatgatat 618

                                                                       
Query: 491 gaatgccaccgtggtgcataccgaagccagccacatcaacttgttgataacctccacaac 550
           ||| ||||| || ||||| || |||||||||||||||||||| ||||||| ||| || ||
Sbjct: 617 gaacgccactgtagtgcacacagaagccagccacatcaacttattgataatctctactac 558

                                                                       
Query: 551 tcgcctctctgctttcgtctcgcccctaacaagtgttatctggaccaccactactgctaa 610
            |||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 557 ccgcctctctgctttagtctctcccctaacaagtgtaatctgaaccaccactactgctaa 498

                                        
Query: 611 tgatgtgaacaaggcgatggcattgaaga 639
           ||||||||||||||| |||||||||||||
Sbjct: 497 tgatgtgaacaaggcaatggcattgaaga 469



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 95  acaccagcttattggaatgtatac 118
           ||||||||||||||||| ||||||
Sbjct: 997 acaccagcttattggaacgtatac 974

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  379 bits (191), Expect = e-102
 Identities = 340/389 (87%), Gaps = 3/389 (0%)
 Strand = Plus / Minus

                                                                           
Query: 254     tcatatggcgtatatccggtctatctcggaatctga---ctccgagttgtggttccatga 310
               |||||||||||||||||||||||||||||| |||||   ||| ||||| || | ||||||
Sbjct: 9578079 tcatatggcgtatatccggtctatctcggagtctgaaaactctgagttttgctgccatga 9578020

                                                                           
Query: 311     gtttgagccgctccgccttgttgatttcaccttcttcctaattgaacgtgtgcgcttgga 370
               ||||||||| |||| |||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 9578019 gtttgagccactcctccttgtagatttcaccttcttcctgatcgaacgtgtgcgcttgga 9577960

                                                                           
Query: 371     cttcaccacatagtatgtcatcgtaccgagcacgccagccatgatcaccccaccaatgag 430
                 ||||||||||||| ||||| ||||| ||||| |||||||||||||| || || || ||
Sbjct: 9577959 tctcaccacatagtaggtcattgtaccaagcacaccagccatgatcactccgccgattag 9577900

                                                                           
Query: 431     ggtcaccagaagcgccgcccacctgaagtgccgacccaccactatgtaagaggaggatat 490
               ||||||||||||||||||||||  |||||||   || || || || |||| ||| |||||
Sbjct: 9577899 ggtcaccagaagcgccgcccactggaagtgcttcccaactacaatataagcggatgatat 9577840

                                                                           
Query: 491     gaatgccaccgtggtgcataccgaagccagccacatcaacttgttgataacctccacaac 550
               ||| ||||| || ||||| || |||||||||||||||||||| ||||||| ||| || ||
Sbjct: 9577839 gaacgccactgtagtgcacacagaagccagccacatcaacttattgataatctctactac 9577780

                                                                           
Query: 551     tcgcctctctgctttcgtctcgcccctaacaagtgttatctggaccaccactactgctaa 610
                |||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 9577779 ccgcctctctgctttagtctctcccctaacaagtgtaatctgaaccaccactactgctaa 9577720

                                            
Query: 611     tgatgtgaacaaggcgatggcattgaaga 639
               ||||||||||||||| |||||||||||||
Sbjct: 9577719 tgatgtgaacaaggcaatggcattgaaga 9577691



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 95      acaccagcttattggaatgtatac 118
               ||||||||||||||||| ||||||
Sbjct: 9578219 acaccagcttattggaacgtatac 9578196

>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009C19, from chromosome 3, complete sequence
          Length = 131709

 Score =  379 bits (191), Expect = e-102
 Identities = 340/389 (87%), Gaps = 3/389 (0%)
 Strand = Plus / Plus

                                                                         
Query: 254   tcatatggcgtatatccggtctatctcggaatctga---ctccgagttgtggttccatga 310
             |||||||||||||||||||||||||||||| |||||   ||| ||||| || | ||||||
Sbjct: 32728 tcatatggcgtatatccggtctatctcggagtctgaaaactctgagttttgctgccatga 32787

                                                                         
Query: 311   gtttgagccgctccgccttgttgatttcaccttcttcctaattgaacgtgtgcgcttgga 370
             ||||||||| |||| |||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 32788 gtttgagccactcctccttgtagatttcaccttcttcctgatcgaacgtgtgcgcttgga 32847

                                                                         
Query: 371   cttcaccacatagtatgtcatcgtaccgagcacgccagccatgatcaccccaccaatgag 430
               ||||||||||||| ||||| ||||| ||||| |||||||||||||| || || || ||
Sbjct: 32848 tctcaccacatagtaggtcattgtaccaagcacaccagccatgatcactccgccgattag 32907

                                                                         
Query: 431   ggtcaccagaagcgccgcccacctgaagtgccgacccaccactatgtaagaggaggatat 490
             ||||||||||||||||||||||  |||||||   || || || || |||| ||| |||||
Sbjct: 32908 ggtcaccagaagcgccgcccactggaagtgcttcccaactacaatataagcggatgatat 32967

                                                                         
Query: 491   gaatgccaccgtggtgcataccgaagccagccacatcaacttgttgataacctccacaac 550
             ||| ||||| || ||||| || |||||||||||||||||||| ||||||| ||| || ||
Sbjct: 32968 gaacgccactgtagtgcacacagaagccagccacatcaacttattgataatctctactac 33027

                                                                         
Query: 551   tcgcctctctgctttcgtctcgcccctaacaagtgttatctggaccaccactactgctaa 610
              |||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 33028 ccgcctctctgctttagtctctcccctaacaagtgtaatctgaaccaccactactgctaa 33087

                                          
Query: 611   tgatgtgaacaaggcgatggcattgaaga 639
             ||||||||||||||| |||||||||||||
Sbjct: 33088 tgatgtgaacaaggcaatggcattgaaga 33116



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 95    acaccagcttattggaatgtatac 118
             ||||||||||||||||| ||||||
Sbjct: 32588 acaccagcttattggaacgtatac 32611

>dbj|AK100495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099A04, full
            insert sequence
          Length = 2618

 Score =  379 bits (191), Expect = e-102
 Identities = 340/389 (87%), Gaps = 3/389 (0%)
 Strand = Plus / Minus

                                                                        
Query: 254  tcatatggcgtatatccggtctatctcggaatctga---ctccgagttgtggttccatga 310
            |||||||||||||||||||||||||||||| |||||   ||| ||||| || | ||||||
Sbjct: 2256 tcatatggcgtatatccggtctatctcggagtctgaaaactctgagttttgctgccatga 2197

                                                                        
Query: 311  gtttgagccgctccgccttgttgatttcaccttcttcctaattgaacgtgtgcgcttgga 370
            ||||||||| |||| |||||| ||||||||||||||||| || |||||||||||||||||
Sbjct: 2196 gtttgagccactcctccttgtagatttcaccttcttcctgatcgaacgtgtgcgcttgga 2137

                                                                        
Query: 371  cttcaccacatagtatgtcatcgtaccgagcacgccagccatgatcaccccaccaatgag 430
              ||||||||||||| ||||| ||||| ||||| |||||||||||||| || || || ||
Sbjct: 2136 tctcaccacatagtaggtcattgtaccaagcacaccagccatgatcactccgccgattag 2077

                                                                        
Query: 431  ggtcaccagaagcgccgcccacctgaagtgccgacccaccactatgtaagaggaggatat 490
            ||||||||||||||||||||||  |||||||   || || || || |||| ||| |||||
Sbjct: 2076 ggtcaccagaagcgccgcccactggaagtgcttcccaactacaatataagcggatgatat 2017

                                                                        
Query: 491  gaatgccaccgtggtgcataccgaagccagccacatcaacttgttgataacctccacaac 550
            ||| ||||| || ||||| || |||||||||||||||||||| ||||||| ||| || ||
Sbjct: 2016 gaacgccactgtagtgcacacagaagccagccacatcaacttattgataatctctactac 1957

                                                                        
Query: 551  tcgcctctctgctttcgtctcgcccctaacaagtgttatctggaccaccactactgctaa 610
             |||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct: 1956 ccgcctctctgctttagtctctcccctaacaagtgtaatctgaaccaccactactgctaa 1897

                                         
Query: 611  tgatgtgaacaaggcgatggcattgaaga 639
            ||||||||||||||| |||||||||||||
Sbjct: 1896 tgatgtgaacaaggcaatggcattgaaga 1868



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 95   acaccagcttattggaatgtatac 118
            ||||||||||||||||| ||||||
Sbjct: 2396 acaccagcttattggaacgtatac 2373

>ref|NM_111789.2| Arabidopsis thaliana protein binding AT3G09550 mRNA, complete cds
          Length = 1730

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 127/159 (79%)
 Strand = Plus / Minus

                                                                        
Query: 461  ccgacccaccactatgtaagaggaggatatgaatgccaccgtggtgcataccgaagccag 520
            |||||| ||||| ||||| || ||||| ||||||||||| |||||||| || ||||| ||
Sbjct: 1359 ccgaccaaccacaatgtacgatgaggaaatgaatgccacggtggtgcagacagaagcgag 1300

                                                                        
Query: 521  ccacatcaacttgttgataacctccacaactcgcctctctgctttcgtctcgcccctaac 580
            |||||| | ||| || || || ||||| || || ||||| | ||| ||||| || || ||
Sbjct: 1299 ccacatgagcttatttattacttccaccacacgtctctccgttttagtctctcctcttac 1240

                                                   
Query: 581  aagtgttatctggaccaccactactgctaatgatgtgaa 619
            ||| || || || || || ||||||||||| || |||||
Sbjct: 1239 aagcgtgatttgcacgacaactactgctaacgaagtgaa 1201

>gb|BT012564.1| Arabidopsis thaliana At3g09550 gene, complete cds
          Length = 1311

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 127/159 (79%)
 Strand = Plus / Minus

                                                                        
Query: 461  ccgacccaccactatgtaagaggaggatatgaatgccaccgtggtgcataccgaagccag 520
            |||||| ||||| ||||| || ||||| ||||||||||| |||||||| || ||||| ||
Sbjct: 1095 ccgaccaaccacaatgtacgatgaggaaatgaatgccacggtggtgcagacagaagcgag 1036

                                                                        
Query: 521  ccacatcaacttgttgataacctccacaactcgcctctctgctttcgtctcgcccctaac 580
            |||||| | ||| || || || ||||| || || ||||| | ||| ||||| || || ||
Sbjct: 1035 ccacatgagcttatttattacttccaccacacgtctctccgttttagtctctcctcttac 976

                                                   
Query: 581  aagtgttatctggaccaccactactgctaatgatgtgaa 619
            ||| || || || || || ||||||||||| || |||||
Sbjct: 975  aagcgtgatttgcacgacaactactgctaacgaagtgaa 937

>gb|AC016661.7|AC016661 Arabidopsis thaliana chromosome 3 BAC F11F8 genomic sequence, complete
             sequence
          Length = 107603

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 127/159 (79%)
 Strand = Plus / Minus

                                                                         
Query: 461   ccgacccaccactatgtaagaggaggatatgaatgccaccgtggtgcataccgaagccag 520
             |||||| ||||| ||||| || ||||| ||||||||||| |||||||| || ||||| ||
Sbjct: 32356 ccgaccaaccacaatgtacgatgaggaaatgaatgccacggtggtgcagacagaagcgag 32297

                                                                         
Query: 521   ccacatcaacttgttgataacctccacaactcgcctctctgctttcgtctcgcccctaac 580
             |||||| | ||| || || || ||||| || || ||||| | ||| ||||| || || ||
Sbjct: 32296 ccacatgagcttatttattacttccaccacacgtctctccgttttagtctctcctcttac 32237

                                                    
Query: 581   aagtgttatctggaccaccactactgctaatgatgtgaa 619
             ||| || || || || || ||||||||||| || |||||
Sbjct: 32236 aagcgtgatttgcacgacaactactgctaacgaagtgaa 32198

>ref|NM_190495.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1752

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 361  tgcgcttggacttcaccacatagtatgtcatcgtaccgagcacgccagccat 412
            ||||||| || |||||||||||||||||||| ||||| || || ||||||||
Sbjct: 1642 tgcgctttgatttcaccacatagtatgtcattgtacccagaacaccagccat 1591

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 361      tgcgcttggacttcaccacatagtatgtcatcgtaccgagcacgccagccat 412
                ||||||| || |||||||||||||||||||| ||||| || || ||||||||
Sbjct: 35878630 tgcgctttgatttcaccacatagtatgtcattgtacccagaacaccagccat 35878681

>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506B12
          Length = 170759

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                  
Query: 361    tgcgcttggacttcaccacatagtatgtcatcgtaccgagcacgccagccat 412
              ||||||| || |||||||||||||||||||| ||||| || || ||||||||
Sbjct: 143088 tgcgctttgatttcaccacatagtatgtcattgtacccagaacaccagccat 143139

>gb|AC021483.11| Homo sapiens, clone RP11-38G5, complete sequence
          Length = 163065

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 155  aaagctgtttatactgagtgc 175
            |||||||||||||||||||||
Sbjct: 9909 aaagctgtttatactgagtgc 9929

>gb|AC026826.7| Homo sapiens, clone RP11-591L14, complete sequence
          Length = 169462

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 155   aaagctgtttatactgagtgc 175
             |||||||||||||||||||||
Sbjct: 92217 aaagctgtttatactgagtgc 92237

>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 529     acttgttgataacctccacaa 549
               |||||||||||||||||||||
Sbjct: 4473301 acttgttgataacctccacaa 4473321

>gb|AC119847.12| Mus musculus chromosome 3, clone RP23-46L5, complete sequence
          Length = 227081

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    ggaatctgactccgagttgt 300
              ||||||||||||||||||||
Sbjct: 175618 ggaatctgactccgagttgt 175637

>emb|AL163280.2|HS21C080 Homo sapiens chromosome 21 segment HS21C080
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   tatacccacagcacctggag 150
             ||||||||||||||||||||
Sbjct: 76123 tatacccacagcacctggag 76142

>emb|AJ421825.1|SAU421825 Stigmatella aurantiaca ORF8, ORF7, ORF6, ORF5, ORF4, ORF3, ORF2, ORF1,
             stiA gene, stiB gene, stiC gene, stiD gene, stiE gene,
             stiF gene, stiG gene, stiH gene, stiJ gene, stiK gene,
             stiL gene and ORF9
          Length = 66808

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    tctgctcctggctcctgccc 86
             ||||||||||||||||||||
Sbjct: 55508 tctgctcctggctcctgccc 55489

>gb|AF064860.2| Homo sapiens chromosome 21 clone PAC 70I24 map 21q22.3, complete
            sequence
          Length = 170121

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  tatacccacagcacctggag 150
            ||||||||||||||||||||
Sbjct: 2714 tatacccacagcacctggag 2733

>gb|AC131971.9| Homo sapiens chromosome 11, clone CTC-343N3, complete sequence
          Length = 176226

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 125 accccatatacccacagcac 144
           ||||||||||||||||||||
Sbjct: 466 accccatatacccacagcac 485

>gb|AC108448.12| Homo sapiens chromosome 11, clone CTD-2544D21, complete sequence
          Length = 198599

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   accccatatacccacagcac 144
             ||||||||||||||||||||
Sbjct: 57855 accccatatacccacagcac 57836

>emb|AL954226.2|PTB126M21 Pan troglodytes chromosome 22 BAC PTB-126M21, complete sequence
          Length = 188320

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    tatacccacagcacctggag 150
              ||||||||||||||||||||
Sbjct: 121185 tatacccacagcacctggag 121204

>dbj|AK114784.1| Ciona intestinalis cDNA, clone:cieg017c10, full insert sequence
          Length = 1922

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 522  cacatcaacttgttgataac 541
            ||||||||||||||||||||
Sbjct: 1311 cacatcaacttgttgataac 1330

>gb|AF121897.4| Homo sapiens chromosome 21 clone RP1-160L9 map 21q22.2, complete
             sequence
          Length = 132088

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   tatacccacagcacctggag 150
             ||||||||||||||||||||
Sbjct: 80363 tatacccacagcacctggag 80382


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,271,681
Number of Sequences: 3902068
Number of extensions: 4271681
Number of successful extensions: 67401
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67272
Number of HSP's gapped (non-prelim): 119
length of query: 639
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 616
effective length of database: 17,143,297,704
effective search space: 10560271385664
effective search space used: 10560271385664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)