>PMYT1_HUMAN (Q99640) Membrane-associated tyrosine- and threonine-specific|
           cdc2-inhibitory kinase (EC 2.7.11.1) (Myt1 kinase)
          Length = 499

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 24/63 (38%), Positives = 31/63 (49%)
 Frame = +1

Query: 190 ASLQVSSLQQPQAWGCLSECYKLKLYLDLSSALSGGPCLIQCYQMFLQVQM*HSLHHPAE 369
           A L +  L+QP+AWG L        +   + ALS G  L Q   + L   + H L HPA 
Sbjct: 352 ALLALPVLRQPRAWGVL--------WCMAAEALSRGWALWQAL-LALLCWLWHGLAHPAS 402

Query: 370 WLQ 378
           WLQ
Sbjct: 403 WLQ 405

>FLAA2_HALSA (P13075) Flagellin A2 precursor|
          Length = 194

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -2

Query: 451 IRMSKQIYAWIGCNQSAKFGHLYAAATTRLGDGVSVTSVLGGTSD 317
           I +SK    WIG +++    H  AA  T LG+  + TS+ G   +
Sbjct: 92  INLSKSTIQWIGPDKATTLTHANAADKTTLGEEFNTTSIKGNNDN 136

>NCAP_IHNV (P19691) Nucleocapsid protein (Nucleoprotein)|
          Length = 413

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
 Frame = -2

Query: 448 RMSKQIYAWIGCNQS--AKFGHLYAAATTRL-GDGVSVTSVLGGTSDNTGS-------SM 299
           +++K IY  I  N S  A      A    RL G G+++  +    + N G+        +
Sbjct: 187 KLTKAIYGIILINLSDPATAARAKALCAMRLSGTGMTMVGLFNQAAKNLGALPADLLEDL 246

Query: 298 ARRLVLKTGLNIILACNIPKDSPMLEAAAERKLVEKLRSLGYIRSXPVEANASTTC*WIL 119
             + V+++   I+    I  ++P + AA    ++ ++  +GY ++  +  NA  TC  IL
Sbjct: 247 CMKSVVESARRIVRLMRIVAEAPGV-AAKYGVMMSRMLGVGYFKAYGINENARITC--IL 303

Query: 118 VN 113
           +N
Sbjct: 304 MN 305

>PIMT_METKA (Q8TYL4) Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)|
           (Protein-beta-aspartate methyltransferase) (PIMT)
           (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl
           protein carboxyl methyltransferase)
          Length = 226

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -2

Query: 241 KDSPMLEAAAERKLVEKLRSLGYIRSXPV 155
           +D  +   A ER LVE+L+SLGYIRS  V
Sbjct: 3   EDDKVFRRARER-LVERLKSLGYIRSNRV 30

>XKDK_BACSU (P54331) Phage-like element PBSX protein xkdK|
          Length = 464

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = -2

Query: 376 ATTRLGDGVSVTSVLGGTSDNTGSSMARRLVLKTGLNIILACNIPKDSPMLEAAAERKLV 197
           A+  + +GV  T+V GGT  N        ++++   N++ A +    + M E+  +++ V
Sbjct: 97  ASADIAEGVKATAVYGGTKGND-------IIIRINQNVLDANSFDVTTYMDESEVDKQTV 149

Query: 196 EKLRSL---GYI 170
           +K   L   GY+
Sbjct: 150 KKAEELTANGYV 161

>PMYT1_MOUSE (Q9ESG9) Membrane-associated tyrosine- and threonine-specific|
           cdc2-inhibitory kinase (EC 2.7.11.1) (Myt1 kinase)
          Length = 490

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 22/63 (34%), Positives = 28/63 (44%)
 Frame = +1

Query: 190 ASLQVSSLQQPQAWGCLSECYKLKLYLDLSSALSGGPCLIQCYQMFLQVQM*HSLHHPAE 369
           A L +  L+QP+ W  L        +   + ALS G  L Q     L   + H L HPA 
Sbjct: 343 ALLALPMLRQPRPWNVL--------WYMAAEALSRGWALWQALVTLL-CWLWHGLVHPAS 393

Query: 370 WLQ 378
           WLQ
Sbjct: 394 WLQ 396

>BCP_HELPY (P55979) Putative peroxiredoxin bcp (EC 1.11.1.15) (Thioredoxin|
           reductase) (Bacterioferritin comigratory protein
           homolog)
          Length = 152

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -2

Query: 337 VLGGTSDNTGSSMARRLVLKTGLNIILACNIPKDSPMLEAAAERKLVEKLRSLGYIRS 164
           V+G + DN  S   ++ + +  LN+IL C+  K +  L  A  ++++     LG IRS
Sbjct: 67  VVGISPDNAQSH--QKFISQCSLNVILLCDEDKKAANLYKAYGKRMLYGKEHLGIIRS 122


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,441,245
Number of Sequences: 219361
Number of extensions: 1249788
Number of successful extensions: 3173
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3172
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)