ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal36a24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 105 1e-19
3emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial se... 105 1e-19
4ref|NM_103713.2| Arabidopsis thaliana unknown protein AT1G48170 ... 86 1e-13
5gb|BT014700.1| Arabidopsis thaliana At1g48170.1 mRNA sequence 86 1e-13
6gb|AY133765.1| Arabidopsis thaliana clone U18923 unknown protein... 86 1e-13
7gb|AY070372.1| Arabidopsis thaliana unknown protein (At1g48170) ... 86 1e-13
8emb|BX817965.1|CNS0AB6F Arabidopsis thaliana Full-length cDNA Co... 86 1e-13
9emb|BX817589.1|CNS0AB4M Arabidopsis thaliana Full-length cDNA Co... 86 1e-13
10gb|BT005744.1| Arabidopsis thaliana clone RAFL16-03-B15 (R50049) 86 1e-13
11gb|AY086896.1| Arabidopsis thaliana clone 29199 mRNA, complete s... 86 1e-13
12gb|AC023673.3|AC023673 Genomic sequence for Arabidopsis thaliana... 72 2e-09
13gb|AC016819.8| Homo sapiens chromosome 10 clone RP11-258D21, com... 42 1.6
14gb|BC075988.1| Danio rerio zgc:92289, mRNA (cDNA clone MGC:92289... 40 6.3
15ref|XM_976875.1| PREDICTED: Mus musculus similar to mortality fa... 40 6.3
16ref|XM_894313.2| PREDICTED: Mus musculus similar to mortality fa... 40 6.3
17gb|AC132303.3| Mus musculus BAC clone RP24-281P9 from chromosome... 40 6.3
18gb|AC127696.4| Mus musculus BAC clone RP23-459J11 from chromosom... 40 6.3
19gb|AC112271.4| Mus musculus BAC clone RP24-121H20 from chromosom... 40 6.3
20ref|XM_855337.1| PREDICTED: Canis familiaris similar to heteroge... 40 6.3
21gb|AC101872.7| Mus musculus chromosome 17, clone RP23-358C2, com... 40 6.3
22ref|XM_701547.1| PREDICTED: Danio rerio similar to mortality fac... 40 6.3
23ref|XM_677596.1| PREDICTED: Danio rerio similar to mortality fac... 40 6.3
24emb|BX936387.9| Zebrafish DNA sequence from clone CH211-245M11 i... 40 6.3
25emb|BX890624.9| Zebrafish DNA sequence from clone DKEY-9I9, comp... 40 6.3
26ref|NM_001002604.1| Danio rerio zgc:92289 (zgc:92289), mRNA 40 6.3
27gb|AC160725.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 6.3
28gb|AC102304.6| Mus musculus chromosome 7, clone RP24-403P14, com... 40 6.3
29gb|AY449459.1| Oikopleura dioica clone BACOIKO003 5xk14, complet... 40 6.3
30emb|CT486002.9| Mouse DNA sequence from clone RP23-396G8 on chro... 40 6.3
31emb|AL831727.6| Mouse DNA sequence from clone RP23-210M20 on chr... 40 6.3
32emb|AL805948.9| Mouse DNA sequence from clone RP23-18C13 on chro... 40 6.3 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Minus

                                                                           
Query: 286     ctaagcggcgggccatgcttgatccagtgttatcagatgttcctccaagtacagatgtga 345
               ||||||| |||||||||| ||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 4201055 ctaagcgacgggccatgcctgaaccagtgttatcagatgttcctcctagtacagaggtga 4200996

                                
Query: 346     cactcactccatcaccc 362
               |||||||||||| ||||
Sbjct: 4200995 cactcactccattaccc 4200979



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                           
Query: 138     gtggaagcgttagcctctactggttnggatctgatatagcctaaacttctcagcttctct 197
               ||||||| |||| ||||| ||| |  || ||||| ||| ||||||| ||||| |||||||
Sbjct: 4201365 gtggaagtgttaacctctcctgctctgggtctgacataacctaaacctctcaacttctct 4201306

                                        
Query: 198     acaagtttcctctctgcagcagcct 222
               |  || |||||||||||||||||||
Sbjct: 4201305 atcagcttcctctctgcagcagcct 4201281



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                           
Query: 220     cctcaagcatggggctgtctttcggaatgttacaagctaaaattatatttagacctgtct 279
               |||| |||||||| |||||||| |||||||| || |||| || ||| || | ||||||||
Sbjct: 4201202 cctcgagcatgggactgtcttttggaatgttgcatgctagaactatgttcaaacctgtct 4201143

                       
Query: 280     tcagcact 287
               ||||||||
Sbjct: 4201142 tcagcact 4201135
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Minus

                                                                           
Query: 286     ctaagcggcgggccatgcttgatccagtgttatcagatgttcctccaagtacagatgtga 345
               ||||||| |||||||||| ||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 4201042 ctaagcgacgggccatgcctgaaccagtgttatcagatgttcctcctagtacagaggtga 4200983

                                
Query: 346     cactcactccatcaccc 362
               |||||||||||| ||||
Sbjct: 4200982 cactcactccattaccc 4200966



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                           
Query: 138     gtggaagcgttagcctctactggttnggatctgatatagcctaaacttctcagcttctct 197
               ||||||| |||| ||||| ||| |  || ||||| ||| ||||||| ||||| |||||||
Sbjct: 4201352 gtggaagtgttaacctctcctgctctgggtctgacataacctaaacctctcaacttctct 4201293

                                        
Query: 198     acaagtttcctctctgcagcagcct 222
               |  || |||||||||||||||||||
Sbjct: 4201292 atcagcttcctctctgcagcagcct 4201268



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                           
Query: 220     cctcaagcatggggctgtctttcggaatgttacaagctaaaattatatttagacctgtct 279
               |||| |||||||| |||||||| |||||||| || |||| || ||| || | ||||||||
Sbjct: 4201189 cctcgagcatgggactgtcttttggaatgttgcatgctagaactatgttcaaacctgtct 4201130

                       
Query: 280     tcagcact 287
               ||||||||
Sbjct: 4201129 tcagcact 4201122
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>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09
             of library OSJNBb from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 104999

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                         
Query: 286   ctaagcggcgggccatgcttgatccagtgttatcagatgttcctccaagtacagatgtga 345
             ||||||| |||||||||| ||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 82728 ctaagcgacgggccatgcctgaaccagtgttatcagatgttcctcctagtacagaggtga 82787

                              
Query: 346   cactcactccatcaccc 362
             |||||||||||| ||||
Sbjct: 82788 cactcactccattaccc 82804



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                         
Query: 138   gtggaagcgttagcctctactggttnggatctgatatagcctaaacttctcagcttctct 197
             ||||||| |||| ||||| ||| |  || ||||| ||| ||||||| ||||| |||||||
Sbjct: 82418 gtggaagtgttaacctctcctgctctgggtctgacataacctaaacctctcaacttctct 82477

                                      
Query: 198   acaagtttcctctctgcagcagcct 222
             |  || |||||||||||||||||||
Sbjct: 82478 atcagcttcctctctgcagcagcct 82502



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                         
Query: 220   cctcaagcatggggctgtctttcggaatgttacaagctaaaattatatttagacctgtct 279
             |||| |||||||| |||||||| |||||||| || |||| || ||| || | ||||||||
Sbjct: 82581 cctcgagcatgggactgtcttttggaatgttgcatgctagaactatgttcaaacctgtct 82640

                     
Query: 280   tcagcact 287
             ||||||||
Sbjct: 82641 tcagcact 82648
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>ref|NM_103713.2| Arabidopsis thaliana unknown protein AT1G48170 mRNA, complete cds
          Length = 944

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                       
Query: 219 gcctcaagcatggggctgtctttcggaatgttacaagctaaaattatatttagacctgtc 278
           |||||||||| |||  ||| ||| || ||||| ||||| |  |||||||| ||||| |||
Sbjct: 410 gcctcaagcaagggattgtttttagggatgttgcaagccagtattatattgagaccagtc 351

                                                                       
Query: 279 ttcagcactaagcggcgggccatgcttgatccagtgttatcagatgttcctccaagtaca 338
           |||| |||||| |  || || ||||  ||||||||||||||||||||||| |||||||| 
Sbjct: 350 ttcaacactaatctacgcgcaatgccagatccagtgttatcagatgttccaccaagtacc 291

                          
Query: 339 gatgtgacactcact 353
           ||||| |||||||||
Sbjct: 290 gatgtaacactcact 276
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>gb|BT014700.1| Arabidopsis thaliana At1g48170.1 mRNA sequence
          Length = 459

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                       
Query: 219 gcctcaagcatggggctgtctttcggaatgttacaagctaaaattatatttagacctgtc 278
           |||||||||| |||  ||| ||| || ||||| ||||| |  |||||||| ||||| |||
Sbjct: 383 gcctcaagcaagggattgtttttagggatgttgcaagccactattatattgagaccagtc 324

                                                                       
Query: 279 ttcagcactaagcggcgggccatgcttgatccagtgttatcagatgttcctccaagtaca 338
           |||| |||||| |  || || ||||  ||||||||||||||||||||||| |||||||| 
Sbjct: 323 ttcaacactaatctacgcgcaatgccagatccagtgttatcagatgttccaccaagtacc 264

                          
Query: 339 gatgtgacactcact 353
           ||||| |||||||||
Sbjct: 263 gatgtaacactcact 249
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>gb|AY133765.1| Arabidopsis thaliana clone U18923 unknown protein (At1g48170) mRNA,
           complete cds
          Length = 493

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                       
Query: 219 gcctcaagcatggggctgtctttcggaatgttacaagctaaaattatatttagacctgtc 278
           |||||||||| |||  ||| ||| || ||||| ||||| |  |||||||| ||||| |||
Sbjct: 386 gcctcaagcaagggattgtttttagggatgttgcaagccagtattatattgagaccagtc 327

                                                                       
Query: 279 ttcagcactaagcggcgggccatgcttgatccagtgttatcagatgttcctccaagtaca 338
           |||| |||||| |  || || ||||  ||||||||||||||||||||||| |||||||| 
Sbjct: 326 ttcaacactaatctacgcgcaatgccagatccagtgttatcagatgttccaccaagtacc 267

                          
Query: 339 gatgtgacactcact 353
           ||||| |||||||||
Sbjct: 266 gatgtaacactcact 252
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>gb|AY070372.1| Arabidopsis thaliana unknown protein (At1g48170) mRNA, complete cds
          Length = 959

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                       
Query: 219 gcctcaagcatggggctgtctttcggaatgttacaagctaaaattatatttagacctgtc 278
           |||||||||| |||  ||| ||| || ||||| ||||| |  |||||||| ||||| |||
Sbjct: 409 gcctcaagcaagggattgtttttagggatgttgcaagccagtattatattgagaccagtc 350

                                                                       
Query: 279 ttcagcactaagcggcgggccatgcttgatccagtgttatcagatgttcctccaagtaca 338
           |||| |||||| |  || || ||||  ||||||||||||||||||||||| |||||||| 
Sbjct: 349 ttcaacactaatctacgcgcaatgccagatccagtgttatcagatgttccaccaagtacc 290

                          
Query: 339 gatgtgacactcact 353
           ||||| |||||||||
Sbjct: 289 gatgtaacactcact 275
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>emb|BX817965.1|CNS0AB6F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL53ZG08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 822

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                       
Query: 219 gcctcaagcatggggctgtctttcggaatgttacaagctaaaattatatttagacctgtc 278
           |||||||||| |||  ||| ||| || ||||| ||||| |  |||||||| ||||| |||
Sbjct: 385 gcctcaagcaagggattgtttttagggatgttgcaagccagtattatattgagaccagtc 326

                                                                       
Query: 279 ttcagcactaagcggcgggccatgcttgatccagtgttatcagatgttcctccaagtaca 338
           |||| |||||| |  || || ||||  ||||||||||||||||||||||| |||||||| 
Sbjct: 325 ttcaacactaatctacgcgcaatgccagatccagtgttatcagatgttccaccaagtacc 266

                          
Query: 339 gatgtgacactcact 353
           ||||| |||||||||
Sbjct: 265 gatgtaacactcact 251
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>emb|BX817589.1|CNS0AB4M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL31ZF04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 569

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                       
Query: 219 gcctcaagcatggggctgtctttcggaatgttacaagctaaaattatatttagacctgtc 278
           |||||||||| |||  ||| ||| || ||||| ||||| |  |||||||| ||||| |||
Sbjct: 384 gcctcaagcaagggattgtttttagggatgttgcaagccagtattatattgagaccagtc 325

                                                                       
Query: 279 ttcagcactaagcggcgggccatgcttgatccagtgttatcagatgttcctccaagtaca 338
           |||| |||||| |  || || ||||  ||||||||||||||||||||||| |||||||| 
Sbjct: 324 ttcaacactaatctacgcgcaatgccagatccagtgttatcagatgttccaccaagtacc 265

                          
Query: 339 gatgtgacactcact 353
           ||||| |||||||||
Sbjct: 264 gatgtaacactcact 250
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>gb|BT005744.1| Arabidopsis thaliana clone RAFL16-03-B15 (R50049)
          Length = 2771

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                       
Query: 219 gcctcaagcatggggctgtctttcggaatgttacaagctaaaattatatttagacctgtc 278
           |||||||||| |||  ||| ||| || ||||| ||||| |  |||||||| ||||| |||
Sbjct: 410 gcctcaagcaagggattgtttttagggatgttgcaagccagtattatattgagaccagtc 351

                                                                       
Query: 279 ttcagcactaagcggcgggccatgcttgatccagtgttatcagatgttcctccaagtaca 338
           |||| |||||| |  || || ||||  ||||||||||||||||||||||| |||||||| 
Sbjct: 350 ttcaacactaatctacgcgcaatgccagatccagtgttatcagatgttccaccaagtacc 291

                          
Query: 339 gatgtgacactcact 353
           ||||| |||||||||
Sbjct: 290 gatgtaacactcact 276
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>gb|AY086896.1| Arabidopsis thaliana clone 29199 mRNA, complete sequence
          Length = 589

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                       
Query: 219 gcctcaagcatggggctgtctttcggaatgttacaagctaaaattatatttagacctgtc 278
           |||||||||| |||  ||| ||| || ||||| ||||| |  |||||||| ||||| |||
Sbjct: 410 gcctcaagcaagggattgtttttagggatgttgcaagccagtattatattgagaccagtc 351

                                                                       
Query: 279 ttcagcactaagcggcgggccatgcttgatccagtgttatcagatgttcctccaagtaca 338
           |||| |||||| |  || || ||||  ||||||||||||||||||||||| |||||||| 
Sbjct: 350 ttcaacactaatctacgcgcaatgccagatccagtgttatcagatgttccaccaagtacc 291

                          
Query: 339 gatgtgacactcact 353
           ||||| |||||||||
Sbjct: 290 gatgtaacactcact 276
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>gb|AC023673.3|AC023673 Genomic sequence for Arabidopsis thaliana BAC F21D18 from chromosome I,
             complete sequence
          Length = 109367

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                             
Query: 306   gatccagtgttatcagatgttcctccaagtacagatgtgacactcact 353
             ||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 32170 gatccagtgttatcagatgttccaccaagtaccgatgtaacactcact 32217
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>gb|AC016819.8| Homo sapiens chromosome 10 clone RP11-258D21, complete sequence
          Length = 134050

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 17     atgccctacactcagtaagcc 37
              |||||||||||||||||||||
Sbjct: 107346 atgccctacactcagtaagcc 107326
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>gb|BC075988.1| Danio rerio zgc:92289, mRNA (cDNA clone MGC:92289 IMAGE:7053703),
           complete cds
          Length = 1434

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 ctcagcttctctacaagttt 205
           ||||||||||||||||||||
Sbjct: 799 ctcagcttctctacaagttt 818
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>ref|XM_976875.1| PREDICTED: Mus musculus similar to mortality factor 4 like 1
           (LOC627352), mRNA
          Length = 1719

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 ctcagcttctctacaagttt 205
           ||||||||||||||||||||
Sbjct: 768 ctcagcttctctacaagttt 787
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>ref|XM_894313.2| PREDICTED: Mus musculus similar to mortality factor 4 like 1
           (LOC627352), mRNA
          Length = 1718

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 ctcagcttctctacaagttt 205
           ||||||||||||||||||||
Sbjct: 768 ctcagcttctctacaagttt 787
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>gb|AC132303.3| Mus musculus BAC clone RP24-281P9 from chromosome 19, complete sequence
          Length = 177097

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    ctcagcttctctacaagttt 205
              ||||||||||||||||||||
Sbjct: 102353 ctcagcttctctacaagttt 102334
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>gb|AC127696.4| Mus musculus BAC clone RP23-459J11 from chromosome 7, complete sequence
          Length = 168580

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 150    gcctctactggttnggatctgat 172
              ||||||||||||| |||||||||
Sbjct: 158314 gcctctactggttgggatctgat 158336
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>gb|AC112271.4| Mus musculus BAC clone RP24-121H20 from chromosome 19, complete
             sequence
          Length = 170681

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   ctcagcttctctacaagttt 205
             ||||||||||||||||||||
Sbjct: 16098 ctcagcttctctacaagttt 16079
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>ref|XM_855337.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear
           ribonucleoprotein H3 isoform a, transcript variant 4
           (LOC479227), mRNA
          Length = 2739

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 251 acaagctaaaattatattta 270
           ||||||||||||||||||||
Sbjct: 548 acaagctaaaattatattta 567
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>gb|AC101872.7| Mus musculus chromosome 17, clone RP23-358C2, complete sequence
          Length = 202465

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     ttataaccattagaaatgtt 68
              ||||||||||||||||||||
Sbjct: 174761 ttataaccattagaaatgtt 174780
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>ref|XM_701547.1| PREDICTED: Danio rerio similar to mortality factor 4 like 1
           (predicted), transcript variant 2 (LOC572577), mRNA
          Length = 1580

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 ctcagcttctctacaagttt 205
           ||||||||||||||||||||
Sbjct: 804 ctcagcttctctacaagttt 823
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>ref|XM_677596.1| PREDICTED: Danio rerio similar to mortality factor 4 like 1
           (predicted), transcript variant 1 (LOC572577), mRNA
          Length = 1578

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 ctcagcttctctacaagttt 205
           ||||||||||||||||||||
Sbjct: 804 ctcagcttctctacaagttt 823
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>emb|BX936387.9| Zebrafish DNA sequence from clone CH211-245M11 in linkage group 18,
             complete sequence
          Length = 71220

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   ctcagcttctctacaagttt 205
             ||||||||||||||||||||
Sbjct: 10356 ctcagcttctctacaagttt 10375
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>emb|BX890624.9| Zebrafish DNA sequence from clone DKEY-9I9, complete sequence
          Length = 152103

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    ctcagcttctctacaagttt 205
              ||||||||||||||||||||
Sbjct: 105804 ctcagcttctctacaagttt 105785
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>ref|NM_001002604.1| Danio rerio zgc:92289 (zgc:92289), mRNA
          Length = 1434

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 ctcagcttctctacaagttt 205
           ||||||||||||||||||||
Sbjct: 799 ctcagcttctctacaagttt 818
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>gb|AC160725.1| Ornithorhynchus anatinus chromosome UNK clone OABb-130A1, complete
             sequence
          Length = 108108

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 174   tagcctaaacttctcagcttctctacaa 201
             |||||| ||||||||| |||||||||||
Sbjct: 14262 tagccttaacttctcaccttctctacaa 14235
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>gb|AC102304.6| Mus musculus chromosome 7, clone RP24-403P14, complete sequence
          Length = 153206

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 150    gcctctactggttnggatctgat 172
              ||||||||||||| |||||||||
Sbjct: 129014 gcctctactggttgggatctgat 128992
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>gb|AY449459.1| Oikopleura dioica clone BACOIKO003 5xk14, complete sequence
          Length = 158922

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 247   tgttacaagctaaaattatattta 270
             ||||||||||| ||||||||||||
Sbjct: 79745 tgttacaagcttaaattatattta 79722
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>emb|CT486002.9| Mouse DNA sequence from clone RP23-396G8 on chromosome 17, complete
              sequence
          Length = 220042

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     ttataaccattagaaatgtt 68
              ||||||||||||||||||||
Sbjct: 110057 ttataaccattagaaatgtt 110076
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>emb|AL831727.6| Mouse DNA sequence from clone RP23-210M20 on chromosome 4, complete
              sequence
          Length = 176930

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    agatgttcctccaagtacag 339
              ||||||||||||||||||||
Sbjct: 131428 agatgttcctccaagtacag 131409
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>emb|AL805948.9| Mouse DNA sequence from clone RP23-18C13 on chromosome 2, complete
             sequence
          Length = 204871

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   ctctacaagtttcctctctg 213
             ||||||||||||||||||||
Sbjct: 22053 ctctacaagtttcctctctg 22034


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,887,526
Number of Sequences: 3902068
Number of extensions: 3887526
Number of successful extensions: 71511
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71429
Number of HSP's gapped (non-prelim): 82
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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