>PSAL_HORVU (P23993) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 209

 Score = 94.7 bits (234), Expect = 1e-19
 Identities = 47/55 (85%), Positives = 47/55 (85%)
 Frame = -3

Query: 462 TAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXGVSGAVWAYFLLYVLDLPYFFK 298
           TAPVLTLTGRKKEADKLQTAEGWSQ        GVSGAVWAYFLLYVLDLPYFFK
Sbjct: 155 TAPVLTLTGRKKEADKLQTAEGWSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209

>PSAL_ARATH (Q9SUI4) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 219

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 35/54 (64%), Positives = 41/54 (75%)
 Frame = -3

Query: 459 APVLTLTGRKKEADKLQTAEGWSQXXXXXXXXGVSGAVWAYFLLYVLDLPYFFK 298
           AP LTLTGRKK+ D+LQTA+GW++        G+SG  WAYFLLYVLDLPYF K
Sbjct: 166 APSLTLTGRKKQPDQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219

>PSAL_CUCSA (Q39654) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 217

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 35/55 (63%), Positives = 41/55 (74%)
 Frame = -3

Query: 462 TAPVLTLTGRKKEADKLQTAEGWSQXXXXXXXXGVSGAVWAYFLLYVLDLPYFFK 298
           TAP LTLTGRKK  D LQTA+GW++        G+SG +WAYFLLYVLDLPY+ K
Sbjct: 163 TAPSLTLTGRKKTPDPLQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

>PSAL_SPIOL (Q41385) Photosystem I reaction center subunit XI, chloroplast|
           precursor (PSI-L) (PSI subunit V)
          Length = 216

 Score = 72.8 bits (177), Expect = 4e-13
 Identities = 33/54 (61%), Positives = 41/54 (75%)
 Frame = -3

Query: 459 APVLTLTGRKKEADKLQTAEGWSQXXXXXXXXGVSGAVWAYFLLYVLDLPYFFK 298
           AP LTLTGRKK+ D+LQ+A+GW++        GVSG  WA FL+YVLDLPY+FK
Sbjct: 163 APALTLTGRKKQPDQLQSADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216

>PSAL_SYNY3 (P37277) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 157

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = -3

Query: 453 VLTLTGRKKEADKLQTAEGWSQXXXXXXXXGVSGAVWAYFLL 328
           ++T  G +   D LQTA+GWSQ        G+ GA  AYFLL
Sbjct: 101 LVTFQGEQGSGDTLQTADGWSQFAAGFFVGGMGGAFVAYFLL 142

>PSAL_CYACA (Q9TM17) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 152

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = -3

Query: 420 DKLQTAEGWSQXXXXXXXXGVSGAVWAYFLL 328
           DKLQTA GW Q         V GA +AY LL
Sbjct: 108 DKLQTANGWRQLASGFLLGAVGGAGFAYILL 138

>PSAL_PORPU (P51222) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 153

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -3

Query: 435 RKKEADKLQTAEGWSQXXXXXXXXGVSGAVWAYFLL 328
           R    D LQTAEGW Q         V G+ +AY LL
Sbjct: 103 RSDSKDPLQTAEGWGQFTAGFLVGAVGGSGFAYLLL 138

>PSAL_GRATL (Q6B8P4) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 150

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -3

Query: 420 DKLQTAEGWSQXXXXXXXXGVSGAVWAYFLL 328
           D LQT EGW Q         V G+ +AY LL
Sbjct: 108 DLLQTTEGWGQFTAGFLVGAVGGSGFAYLLL 138

>PSAL_SYNEN (P25902) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 148

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 423 ADKLQTAEGWSQXXXXXXXXGVSGAVWAYFLL 328
           +D L+T+EGWSQ         +  A  A+FLL
Sbjct: 108 SDPLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 139

>PSAL_SYNEL (Q8DGB4) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 155

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 423 ADKLQTAEGWSQXXXXXXXXGVSGAVWAYFLL 328
           +D L+T+EGWSQ         +  A  A+FLL
Sbjct: 109 SDPLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 140

>PSAL_MASLA (O31126) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 173

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 420 DKLQTAEGWSQXXXXXXXXGVSGAVWAYFLLYVLDL 313
           +  Q++EGW+         G+ GAV AYFL   L+L
Sbjct: 131 EAFQSSEGWNNFASAFLIGGIGGAVVAYFLTSNLEL 166

>SRG33_CAEEL (O01538) Serpentine receptor class gamma-33 (Protein srg-33)|
          Length = 321

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 15/80 (18%)
 Frame = -3

Query: 339 YFLLYVLDLPYFFK*I-------NRWHACTMS---PDHAI-SSRWLPERVFYV*MNFYI- 196
           Y + +V ++  FF          N    C MS     H + +  W P  VFY  ++FY+ 
Sbjct: 42  YIVFFVFNIITFFNSFITVRIPQNTCKDCFMSFLFKSHTVLNPSWFPLNVFYF-IHFYMA 100

Query: 195 ---FLIIFGTSLFRRSMDSW 145
              F +IF TSL R SM  W
Sbjct: 101 YAQFFLIFLTSLNRFSMIFW 120

>PSAL_ANAVT (P31092) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 172

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 420 DKLQTAEGWSQXXXXXXXXGVSGAVWAYFL 331
           D  Q+ EGW+         G+ GAV AYFL
Sbjct: 131 DAFQSKEGWNNFASAFLIGGIGGAVVAYFL 160

>PSAL_ANASP (P58577) Photosystem I reaction center subunit XI (PSI-L) (PSI|
           subunit V)
          Length = 172

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 420 DKLQTAEGWSQXXXXXXXXGVSGAVWAYFL 331
           D  Q+ EGW+         G+ GAV AYFL
Sbjct: 131 DAFQSKEGWNNFASAFLIGGIGGAVVAYFL 160


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,307,760
Number of Sequences: 219361
Number of extensions: 898765
Number of successful extensions: 2045
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2045
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)