ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal36a22 |
|---|---|
| Clone Library Name | barley_pub |
>BLC_ECOLI (P0A901) Outer membrane lipoprotein blc precursor| Length = 177 Score = 85.5 bits (210), Expect = 1e-16 Identities = 57/144 (39%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Frame = -3 Query: 670 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWS--KGKRDYIEGT 497 D RY+G WYEIA F + F+ R ATY L +DG ++V+N+ ++ +G EG Sbjct: 35 DAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGG-LNVINKGYNPDRGMWQQSEGK 92 Query: 496 AYKADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEPRRKSLWILCRK 317 AY A A LKV F+ P + G Y V+ +D +Y++ALV P R LWIL R Sbjct: 93 AYFTG-APTRAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWILSRT 144 Query: 316 THIEEEVYNQLLEKAKEEGYDVAK 245 I +EV ++L A EG+DV+K Sbjct: 145 PTISDEVKQEMLAVATREGFDVSK 168
>BLC_ECO57 (P0A902) Outer membrane lipoprotein blc precursor| Length = 177 Score = 85.5 bits (210), Expect = 1e-16 Identities = 57/144 (39%), Positives = 80/144 (55%), Gaps = 2/144 (1%) Frame = -3 Query: 670 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWS--KGKRDYIEGT 497 D RY+G WYEIA F + F+ R ATY L +DG ++V+N+ ++ +G EG Sbjct: 35 DAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGG-LNVINKGYNPDRGMWQQSEGK 92 Query: 496 AYKADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEPRRKSLWILCRK 317 AY A A LKV F+ P + G Y V+ +D +Y++ALV P R LWIL R Sbjct: 93 AYFTG-APTRAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWILSRT 144 Query: 316 THIEEEVYNQLLEKAKEEGYDVAK 245 I +EV ++L A EG+DV+K Sbjct: 145 PTISDEVKQEMLAVATREGFDVSK 168
>BLC_CITFR (Q46036) Outer membrane lipoprotein blc precursor| Length = 177 Score = 84.0 bits (206), Expect = 4e-16 Identities = 57/146 (39%), Positives = 83/146 (56%), Gaps = 3/146 (2%) Frame = -3 Query: 670 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDY--IEGT 497 D RY+G WYEIA F + F+ R ATY L +DG ++V+N+ ++ + + EG Sbjct: 35 DAKRYLGTWYEIARFDHRFE-RGLDKVTATYSLRDDGG-INVINKGYNPDREMWQKTEGK 92 Query: 496 AY-KADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEPRRKSLWILCR 320 AY DP++ A LKV F+ P + G Y V+ +D +Y++ALV P R LWIL R Sbjct: 93 AYFTGDPST--AALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWILSR 143 Query: 319 KTHIEEEVYNQLLEKAKEEGYDVAKL 242 I +E+ Q+L A EG++V KL Sbjct: 144 TPTISDEMKQQMLAIATREGFEVNKL 169
>YR877_MIMIV (Q5URA7) Putative lipocalin R877 precursor| Length = 169 Score = 76.6 bits (187), Expect = 6e-14 Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 2/145 (1%) Frame = -3 Query: 670 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAY 491 D+ RYMG WYEIA P FQ + ++ A Y+L+E + V N G+ + + GTA Sbjct: 29 DIQRYMGTWYEIARLPTSFQ-KGCVNSTANYQLLEPN-KIQVTNNCEINGRINSVTGTAI 86 Query: 490 KADPASDEAKLKVKFYVPPFLPIIPVVG--DYWVLYVDDDYQYALVGEPRRKSLWILCRK 317 PA++ ++ F P L + G Y V+++D++YQYA+V +LWIL R Sbjct: 87 ---PAAN-TRIVSGFLTPASLMVNFGYGFSPYNVIFIDENYQYAIV-SGGNDTLWILSRF 141 Query: 316 THIEEEVYNQLLEKAKEEGYDVAKL 242 +I + YNQL+ +GYDV L Sbjct: 142 KNINQSTYNQLVTIVYNQGYDVNNL 166
>BLC_VIBCH (Q08790) Outer membrane lipoprotein blc precursor (Protein vlp)| Length = 171 Score = 74.3 bits (181), Expect = 3e-13 Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 3/146 (2%) Frame = -3 Query: 670 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDY--IEGT 497 ++ Y+G+WYE+A + F+ R A Y + DG + VLN +S+ K ++ EG Sbjct: 30 ELNNYLGKWYEVARLDHSFE-RGLSQVTAEYRVRNDGG-ISVLNRGYSEEKGEWKEAEGK 87 Query: 496 AYKADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVD-DDYQYALVGEPRRKSLWILCR 320 AY + ++D LKV F+ P + G Y V +D ++Y YA V P + LW+L R Sbjct: 88 AYFVNGSTD-GYLKVSFFGPFY-------GSYVVFELDRENYSYAFVSGPNTEYLWLLSR 139 Query: 319 KTHIEEEVYNQLLEKAKEEGYDVAKL 242 +E + ++ +E +KE G+D +L Sbjct: 140 TPTVERGILDKFIEMSKERGFDTNRL 165
>APOD_MOUSE (P51910) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 72.8 bits (177), Expect = 9e-13 Identities = 55/160 (34%), Positives = 80/160 (50%), Gaps = 8/160 (5%) Frame = -3 Query: 670 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWS-KGKRDYIEGTA 494 DV +Y+GRWYEI P F+ G +A Y LME+G + VLN+ S G + ++G A Sbjct: 38 DVKKYLGRWYEIEKIPASFE--KGNCIQANYSLMENG-NIEVLNKELSPDGTMNQVKGEA 94 Query: 493 YKADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEPRR-------KSL 335 K S+ AKL+V+F+ P +P P YW+L D + YALV + Sbjct: 95 -KQSNVSEPAKLEVQFF--PLMPPAP----YWILATDYE-NYALVYSCTTFFWLFHVDFV 146 Query: 334 WILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQSDPP 215 WIL R ++ E L + G D+ K+ T Q++ P Sbjct: 147 WILGRNPYLPPETITYLKDILTSNGIDIEKMTTTDQANCP 186
>APOD_MACFA (Q8SPI0) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 68.6 bits (166), Expect = 2e-11 Identities = 55/159 (34%), Positives = 73/159 (45%), Gaps = 7/159 (4%) Frame = -3 Query: 670 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAY 491 D +Y GRWYEI P F+ GR +A Y L E+G + E + G + IEG A Sbjct: 38 DPNKYFGRWYEIEKIPTTFE--KGRCIQANYSLKENGKIKVLNQELRADGTVNQIEGEAS 95 Query: 490 KADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEP-------RRKSLW 332 + ++ AKL+VKF+ F+P P YWVL D + YALV R W Sbjct: 96 PVN-ITEPAKLEVKFFW--FMPSAP----YWVLATDYE-NYALVYSCVSIINLFRVDYAW 147 Query: 331 ILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQSDPP 215 IL R H+ E + L DV K+ T Q + P Sbjct: 148 ILARNRHLPSETVDFLKNILTSNNIDVKKMTVTDQENCP 186
>APOD_HUMAN (P05090) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 67.8 bits (164), Expect = 3e-11 Identities = 54/159 (33%), Positives = 75/159 (47%), Gaps = 7/159 (4%) Frame = -3 Query: 670 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAY 491 DV +Y+GRWYEI P F+ +GR +A Y LME+G + E + G + IEG A Sbjct: 38 DVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLMENGKIKVLNQELRADGTVNQIEGEAT 95 Query: 490 KADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEP-------RRKSLW 332 + ++ AKL+VKF F+P P YW+L D + YALV W Sbjct: 96 PVN-LTEPAKLEVKF--SWFMPSAP----YWILATDYE-NYALVYSCTCIIQLFHVDFAW 147 Query: 331 ILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQSDPP 215 IL R ++ E + L DV K+ T Q + P Sbjct: 148 ILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVNCP 186
>APOD_RABIT (P37153) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 65.1 bits (157), Expect = 2e-10 Identities = 55/160 (34%), Positives = 77/160 (48%), Gaps = 8/160 (5%) Frame = -3 Query: 670 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLN-ETWSKGKRDYIEGTA 494 DV +Y+GRWYEI P F+ G +A Y LME+G + VLN E G + IEG A Sbjct: 39 DVHKYLGRWYEIEKIPVSFE--KGNCIQANYSLMENG-NIKVLNQELRPDGTVNQIEGQA 95 Query: 493 YKADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEP-------RRKSL 335 +++ ++ AKL VKF+ +P P YWVL D + YALV + Sbjct: 96 TQSN-LTEPAKLGVKFF--QLMPTAP----YWVLATDYE-NYALVYSCTTIIWLFHMDHV 147 Query: 334 WILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQSDPP 215 WIL R ++ E L + D+ K+ T Q + P Sbjct: 148 WILGRNRYLPPETVTYLKDILTANNIDIEKMTVTDQVNCP 187
>APOD_CAVPO (P51909) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 65.1 bits (157), Expect = 2e-10 Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 7/159 (4%) Frame = -3 Query: 670 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAY 491 D+ +Y+GRWYEI P F+ G +A Y L E+G + E G + IEG A Sbjct: 38 DLNKYLGRWYEIEKIPVSFE--KGNCIQANYSLKENGRVKVLNQELRPDGTVNQIEGEAT 95 Query: 490 KADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEPRR-------KSLW 332 ++ ++ AKL VKF+ +P P YWVL D D YALV +W Sbjct: 96 HSN-ITEPAKLGVKFF--QLMPSAP----YWVLATDYD-NYALVYSCTNIIWLFHVDHIW 147 Query: 331 ILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQSDPP 215 IL R ++ +E L + D+ K+ T Q++ P Sbjct: 148 ILGRNRYLPQETVTYLKDILTSNNIDIEKMTLTDQANCP 186
>APOD_RAT (P23593) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 64.3 bits (155), Expect = 3e-10 Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 8/160 (5%) Frame = -3 Query: 670 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLN-ETWSKGKRDYIEGTA 494 DV +Y+GRWYEI P F+ G +A Y LME+G + VLN E G + +EG A Sbjct: 38 DVKKYLGRWYEIEKIPVSFE--KGNCIQANYSLMENG-NIKVLNKELRPDGTLNQVEGEA 94 Query: 493 YKADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVDDDYQYALVGEPRR-------KSL 335 K S+ AKL+V+F+ +P P YW+L D + YALV + Sbjct: 95 -KQSNMSEPAKLEVQFF--SLMPPAP----YWILATDYE-SYALVYSCTTFFWFFHVDYV 146 Query: 334 WILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQSDPP 215 WIL R ++ E L D+AK+ Q++ P Sbjct: 147 WILGRNPYLPPETITYLKYILTSNDIDIAKITTKDQANCP 186
>LAZA_SCHAM (P49291) Lazarillo protein precursor| Length = 214 Score = 47.8 bits (112), Expect = 3e-05 Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 7/152 (4%) Frame = -3 Query: 658 YMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAYKADP 479 YMG+WYE A + G A Y + + TV + + + + G A A Sbjct: 42 YMGKWYEYAKMGSMPYEEGGVCVTAEYSMSSNNITVVNSMKDNTTHEVNTTTGWAEFASE 101 Query: 478 ASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVD-DDYQ--YALVGEP----RRKSLWILCR 320 + KL V F P P VG+YW+L D D+Y ++ V P + WIL R Sbjct: 102 LHTDGKLSVHF------PNSPSVGNYWILSTDYDNYSIVWSCVKRPDSAASTEISWILLR 155 Query: 319 KTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQS 224 + ++ ++ K D+ K KT QS Sbjct: 156 SRNSSNMTLERVEDELKNLQLDLNKYTKTEQS 187
>BBP_PIEBR (P09464) Bilin-binding protein precursor (BBP)| Length = 189 Score = 39.3 bits (90), Expect = 0.011 Identities = 23/60 (38%), Positives = 34/60 (56%) Frame = -3 Query: 670 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAY 491 D + Y G+W+E+A +PN + + G+ A Y +G +V V N GK +IEGTAY Sbjct: 33 DWSNYHGKWWEVAKYPNSVE-KYGKCGWAEY--TPEGKSVKVSNYHVIHGKEYFIEGTAY 89
>ICYA_MANSE (P00305) Insecticyanin A form (Blue biliprotein) (INS-a)| Length = 189 Score = 35.8 bits (81), Expect = 0.12 Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 16/147 (10%) Frame = -3 Query: 670 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAY 491 D++ + G W+EIA P G+ T A Y+ DG V N S G ++Y+EG Sbjct: 19 DLSAFAGAWHEIAKLP-LENENQGKCTIAEYKY--DGKKASVYNSFVSNGVKEYMEG--- 72 Query: 490 KADPASDEAKLKVKFYVPPF------LPIIPVVGDYWVL---YVDDDYQYALVGEPRRKS 338 + A D K YV F + ++P WVL Y + Y P +K+ Sbjct: 73 DLEIAPDAKYTKQGKYVMTFKFGQRVVNLVP-----WVLATDYKNYAINYNCDYHPDKKA 127 Query: 337 ----LWILCRKTHIE---EEVYNQLLE 278 WIL + +E +EV + +L+ Sbjct: 128 HSIHAWILSKSKVLEGNTKEVVDNVLK 154
>MATR3_MOUSE (Q8K310) Matrin-3| Length = 846 Score = 33.5 bits (75), Expect = 0.60 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Frame = -3 Query: 367 ALVGEPRRKSLWILCRKTHIE-EEVYNQLLEKAKEEGYDVAKLHKTPQSDPPPEGDAAPT 191 A+V +K+LW R ++ E Y +L+ + G D+ K K+ + P+G +P+ Sbjct: 547 AMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRKRSYSPDGKESPS 606 Query: 190 DSK 182 D K Sbjct: 607 DKK 609
>ICYB_MANSE (Q00630) Insecticyanin B form precursor (Blue biliprotein) (INS-b)| Length = 206 Score = 33.5 bits (75), Expect = 0.60 Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 16/147 (10%) Frame = -3 Query: 670 DVARYMGRWYEIASFPNFFQPRDGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAY 491 D++ + G W+EIA P G+ T A Y+ DG V N G ++Y+EG Sbjct: 36 DLSAFAGAWHEIAKLP-LENENQGKCTIAEYKY--DGKKASVYNSFVVNGVKEYMEG--- 89 Query: 490 KADPASDEAKLKVKFYVPPF------LPIIPVVGDYWVL---YVDDDYQYALVGEPRRKS 338 + A D K YV F + ++P WVL Y + Y P +K+ Sbjct: 90 DLEIAPDAKYTKQGKYVMTFKFGQRVVNLVP-----WVLATDYKNYAINYNCNYHPDKKA 144 Query: 337 ----LWILCRKTHIE---EEVYNQLLE 278 WIL + +E +EV + +L+ Sbjct: 145 HSIHAWILSKSKVLEGNTKEVVDNVLK 171
>MATR3_RAT (P43244) Matrin-3 (Nuclear scaffold protein P130/MAT3)| Length = 845 Score = 33.5 bits (75), Expect = 0.60 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Frame = -3 Query: 367 ALVGEPRRKSLWILCRKTHIE-EEVYNQLLEKAKEEGYDVAKLHKTPQSDPPPEGDAAPT 191 A+V +K+LW R ++ E Y +L+ + G D+ K K+ + P+G +P+ Sbjct: 547 AMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRKRSYSPDGKESPS 606 Query: 190 DSK 182 D K Sbjct: 607 DKK 609
>MATR3_HUMAN (P43243) Matrin-3| Length = 847 Score = 33.5 bits (75), Expect = 0.60 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Frame = -3 Query: 367 ALVGEPRRKSLWILCRKTHIE-EEVYNQLLEKAKEEGYDVAKLHKTPQSDPPPEGDAAPT 191 A+V +K+LW R ++ E Y +L+ + G D+ K K+ + P+G +P+ Sbjct: 547 AMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRKRSYSPDGKESPS 606 Query: 190 DSK 182 D K Sbjct: 607 DKK 609
>C94A2_VICSA (P98188) Cytochrome P450 94A2 (EC 1.14.-.-) (P450-dependent fatty| acid omega-hydroxylase) Length = 513 Score = 30.8 bits (68), Expect = 3.9 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = -3 Query: 334 WILCRKTHIEEEVYNQLLEKAKEEGYDVAK 245 W+L + +H+E E+ ++ K++ GYD K Sbjct: 327 WLLSKHSHVENEILKEITGKSETVGYDEVK 356
>YR75_ECOLI (P21314) Hypothetical 36.8 kDa protein (ORF5) (Retron EC67)| Length = 326 Score = 30.0 bits (66), Expect = 6.6 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%) Frame = +3 Query: 66 YTKIDTDKHTSWLLQY----RPTSYTDG*TYHLPKSDLNHQ 176 YT+ D T W +QY +P +T G +HL + D+N + Sbjct: 133 YTRRGLDLDTYWFVQYGMTTQPYQFTKGSIFHLLEPDINQE 173
>C94A1_VICSA (O81117) Cytochrome P450 94A1 (EC 1.14.-.-) (P450-dependent fatty| acid omega-hydroxylase) Length = 514 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 8/61 (13%) Frame = -3 Query: 334 WILCRKTHIEEEVYNQLLEKA--------KEEGYDVAKLHKTPQSDPPPEGDAAPTDSKG 179 W+L + +EEE+ N+L +K+ KE Y A L ++ + PP P DSK Sbjct: 329 WLLWKNPRVEEEIVNELSKKSELMVYDEVKEMVYTHAALSESMRLYPP-----VPMDSKE 383 Query: 178 A 176 A Sbjct: 384 A 384
>Y1163_AQUAE (O67227) Hypothetical protein aq_1163| Length = 125 Score = 29.6 bits (65), Expect = 8.7 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Frame = -3 Query: 415 VVGDYWVLYVDDDYQYALVGE---PRRKSLWILCRKTHIEEEVYNQLLEKAKEEGYD 254 V G+ W++YVD +A + E PR ++ W R I E + ++EE YD Sbjct: 61 VQGEGWIVYVDPFNNFADIYEANKPRYRNRWNQERPYDISETRFRVGFFPSREEAYD 117
>PDI2_SCHPO (O13811) Protein disulfide-isomerase C17H9.14c precursor (EC| 5.3.4.1) Length = 359 Score = 29.6 bits (65), Expect = 8.7 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -3 Query: 670 DVARYMGRWYEIASFPNF-FQPRDGRDTRATYE 575 DV +GR +E+ASFP F P+D +D YE Sbjct: 201 DVFADIGRLHEVASFPTIKFFPKDDKDKPELYE 233
>AT1B4_HUMAN (Q9UN42) X/potassium-transporting ATPase beta-m chain (X,K-ATPase| beta-m subunit) Length = 357 Score = 29.6 bits (65), Expect = 8.7 Identities = 18/71 (25%), Positives = 30/71 (42%) Frame = -3 Query: 376 YQYALVGEPRRKSLWILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQSDPPPEGDAA 197 Y+Y L ++ + EEE ++ K++EE + K + + EG Sbjct: 17 YRYRLDDPDEANQNYLADEEEEAEEEARVTVVPKSEEEEEEEEKEEEEEEEKEEEEGQGQ 76 Query: 196 PTDSKGAWWFK 164 PT + AWW K Sbjct: 77 PTGN--AWWQK 85 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,296,771 Number of Sequences: 219361 Number of extensions: 1242232 Number of successful extensions: 4891 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 4644 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4877 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
