ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal35l03 |
|---|---|
| Clone Library Name | barley_pub |
>PRR73_ORYSA (Q689G4) Two-component response regulator-like PRR73| (Pseudo-response regulator 73) (OsPRR73) Length = 767 Score = 296 bits (758), Expect(2) = 3e-80 Identities = 156/219 (71%), Positives = 162/219 (73%), Gaps = 5/219 (2%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VENDD TR VV ALL KC YEVI AENGL AWQ LED+QN IDLVLTEV MP LSGIGLL Sbjct: 86 VENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLSGIGLL 145 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRRCXX 329 SKITSH ICK IPVIMMS NDSM TVFKCLSKGAVDFLVKPIRKNELK LWQH+WRRC Sbjct: 146 SKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHS 205 Query: 328 XXXXXXXX--XIQKCSKPKTGDEYAKNSGGSH---XXXXXXXXXXDFSVGPNARDGSDNG 164 QKC+KPK DEY NSG ++ D SVG NARDGSDNG Sbjct: 206 SSGSGSESGIRTQKCTKPKVDDEYENNSGSNNDNEDDDDNDEDDDDLSVGHNARDGSDNG 265 Query: 163 SGTQSSWTKRAVEIDSPQLVSSDHLSDSPDSTCAQVFTP 47 SGTQSSWTKRAVEIDSPQ +S D SD PDSTCAQV P Sbjct: 266 SGTQSSWTKRAVEIDSPQQMSPDQPSDLPDSTCAQVIHP 304 Score = 22.7 bits (47), Expect(2) = 3e-80 Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 1/19 (5%) Frame = -1 Query: 56 IHPRSEIGSNRG-ADANKR 3 IHP SEI SNR ANKR Sbjct: 302 IHPTSEICSNRWLPTANKR 320
>PRR37_ORYSA (Q689G8) Two-component response regulator-like PRR37| (Pseudo-response regulator 37) (OsPRR37) Length = 742 Score = 268 bits (685), Expect = 1e-71 Identities = 140/215 (65%), Positives = 156/215 (72%), Gaps = 4/215 (1%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++DD TR VV ALL C YEVI AENG AW YLED+QN IDLVLTEV MP +SGI LL Sbjct: 67 VDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVSGISLL 126 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRRCXX 329 S+I +H+ICK IPVIMMS ND+M TVFKCLSKGAVDFLVKPIRKNELK LWQH+WRRC Sbjct: 127 SRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHS 186 Query: 328 XXXXXXXX--XIQKCSKPKTGDEYAKNSGGSHXXXXXXXXXXDFSVGPNARDGSDNGSGT 155 QKC+K K+GDE N+G + +G NARDGSDNGSGT Sbjct: 187 SSGSGSESGIQTQKCAKSKSGDESNNNNGSNDDDDDDGVI-----MGLNARDGSDNGSGT 241 Query: 154 --QSSWTKRAVEIDSPQLVSSDHLSDSPDSTCAQV 56 QSSWTKRAVEIDSPQ +S D L+D PDSTCAQV Sbjct: 242 QAQSSWTKRAVEIDSPQAMSPDQLADPPDSTCAQV 276
>APRR7_ARATH (Q93WK5) Two-component response regulator-like APRR7| (Pseudo-response regulator 7) Length = 727 Score = 229 bits (584), Expect = 6e-60 Identities = 124/215 (57%), Positives = 145/215 (67%), Gaps = 4/215 (1%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VENDDCTR++V ALL C YEV+ A NG+ AW+ LED+ N ID+VLTEV MP LSGIGLL Sbjct: 83 VENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLSGIGLL 142 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRRCXX 329 KI +H + IPVIMMS +DSM VFKCLSKGAVDFLVKPIRKNELK LWQH+WRRC Sbjct: 143 CKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRRCQS 202 Query: 328 XX---XXXXXXXIQKCSKPKTGDEYAKNSGGSHXXXXXXXXXXDFSVGPNARDGSDNGSG 158 QK K K+ + ++SG S S+G NA DGS +GSG Sbjct: 203 SSGSGSESGTHQTQKSVKSKSIKKSDQDSGSSDENENG-------SIGLNASDGSSDGSG 255 Query: 157 TQSSWTKRAVEI-DSPQLVSSDHLSDSPDSTCAQV 56 QSSWTK+AV++ DSP+ VS L D DSTCAQV Sbjct: 256 AQSSWTKKAVDVDDSPRAVS---LWDRVDSTCAQV 287
>APRR3_ARATH (Q9LVG4) Two-component response regulator-like APRR3| (Pseudo-response regulator 3) Length = 495 Score = 195 bits (496), Expect = 1e-49 Identities = 112/217 (51%), Positives = 129/217 (59%), Gaps = 12/217 (5%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VENDD TRH+V ALL C YEV + + L+AW+ LED ++ IDLVLTEV MP SG GLL Sbjct: 69 VENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHSGTGLL 128 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRRCXX 329 SKI SH K IPVIMMS +DSM VFKCLS GAVDFLVKPIRKNELK LWQH+WRRC Sbjct: 129 SKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVWRRCHS 188 Query: 328 XXXXXXXX--XIQKCSKPKT----------GDEYAKNSGGSHXXXXXXXXXXDFSVGPNA 185 +K KP++ DE+ SG S N Sbjct: 189 SSGSGSESGIHDKKSVKPESTQGSENDASISDEHRNESGSSGGLS-------------NQ 235 Query: 184 RDGSDNGSGTQSSWTKRAVEIDSPQLVSSDHLSDSPD 74 GSDNGSGTQSSWTKRA D+ S+ D+P+ Sbjct: 236 DGGSDNGSGTQSSWTKRA--SDTKSTSPSNQFPDAPN 270
>PRR95_ORYSA (Q689G6) Two-component response regulator-like PRR95| (Pseudo-response regulator 95) (OsPRR95) Length = 623 Score = 159 bits (402), Expect = 8e-39 Identities = 86/192 (44%), Positives = 111/192 (57%) Frame = -2 Query: 685 ENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLS 506 E DD TRH++ ALL KCGY V +A +G+ AW L++ IDLVLTEV +P +SG LLS Sbjct: 49 EGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMSGFLLLS 108 Query: 505 KITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRRCXXX 326 I H CK IPVIMMS NDS+S VFKC+ KGA DFLVKPIRKNEL+ LWQH+WR+ Sbjct: 109 TIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRKQLSS 168 Query: 325 XXXXXXXXIQKCSKPKTGDEYAKNSGGSHXXXXXXXXXXDFSVGPNARDGSDNGSGTQSS 146 Q+ + + ++ + H +V + S+ S QSS Sbjct: 169 GVLDVQHTQQEDNLTERHEQKTGVTKAEHVTE---------NVVHKNMECSEQESDAQSS 219 Query: 145 WTKRAVEIDSPQ 110 T+ +E DS Q Sbjct: 220 CTRSELEADSRQ 231
>APRR5_ARATH (Q6LA42) Two-component response regulator-like APRR5| (Pseudo-response regulator 5) Length = 558 Score = 149 bits (377), Expect = 6e-36 Identities = 84/210 (40%), Positives = 112/210 (53%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE DD TR ++ ALL KC Y V + +GL AW+ L+ +DL+LTEV +P +SG LL Sbjct: 55 VEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSISGYALL 114 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRRCXX 329 + I H ICK IPVIMMS DS++TV+KC+ KGA D+LVKP+R+NEL+ LWQH+WRR Sbjct: 115 TLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQHVWRR-QT 173 Query: 328 XXXXXXXXXIQKCSKPKTGDEYAKNSGGSHXXXXXXXXXXDFSVGPNARDGSDNGSGTQS 149 + + K A NS G S NG QS Sbjct: 174 SLAPDSFPWNESVGQQKAEGASANNSNGKRDDHVV----------------SGNGGDAQS 217 Query: 148 SWTKRAVEIDSPQLVSSDHLSDSPDSTCAQ 59 S T+ +E +S + S D+ CA+ Sbjct: 218 SCTRPEMEGESADVEVS--ARDAVQMECAK 245
>APRR9_ARATH (Q8L500) Two-component response regulator-like APRR9| (Pseudo-response regulator 9) Length = 468 Score = 143 bits (360), Expect = 6e-34 Identities = 62/117 (52%), Positives = 86/117 (73%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE+D TR ++ ALL KC Y+V++ +GL AW+ L++ + IDL+LTE+ +P +SG LL Sbjct: 42 VESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSISGFALL 101 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + + H CK IPVIMMS DS+ V KC+ +GA D+L+KP+RKNELK LWQH+WRR Sbjct: 102 ALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 158
>APRR1_ARATH (Q9LKL2) Two-component response regulator-like APRR1| (Pseudo-response regulator 1) (Timing of CAB expression 1) (ABI3-interacting protein 1) Length = 618 Score = 94.7 bits (234), Expect = 2e-19 Identities = 47/116 (40%), Positives = 66/116 (56%) Frame = -2 Query: 685 ENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLS 506 +ND + V LL +C Y+V + ++ L ID++L E+ +P G+ +L Sbjct: 25 DNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLR 84 Query: 505 KITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 IT + IPVIMMS+ D + V KCL GA D+LVKP+R NEL LW H+WRR Sbjct: 85 YITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRR 140
>PRR1_ORYSA (Q689G9) Two-component response regulator-like PRR1| (Pseudo-response regulator 1) (OsPRR1) Length = 518 Score = 89.4 bits (220), Expect = 1e-17 Identities = 45/116 (38%), Positives = 63/116 (54%) Frame = -2 Query: 685 ENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLS 506 ++D + V LL C Y+V A++ L ID++L EV +P +L Sbjct: 34 DSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSKCFKMLK 93 Query: 505 KITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 I + + IP+IMMS D +S V KCL GA ++LVKP+R NEL LW H+WRR Sbjct: 94 YIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRR 149
>REGA_DICDI (Q23917) 3',5'-cyclic-nucleotide phosphodiesterase regA (EC| 3.1.4.17) (PDEase regA) Length = 793 Score = 81.3 bits (199), Expect = 3e-15 Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 5/121 (4%) Frame = -2 Query: 685 ENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLS 506 ++DD R ++ LL K Y V NG AW+Y+ Q + DLVLT+V MP ++G LL Sbjct: 166 DDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHITGFDLLQ 225 Query: 505 KITSHSICKGIPVIMMSKND-SMSTVFKCLSKGAVDFLVKPIRKNELK----TLWQHIWR 341 +I H + + IPVI+MS + G DFL KPI K LK T+ Q IW+ Sbjct: 226 RINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKIDTVLQSIWQ 285 Query: 340 R 338 R Sbjct: 286 R 286
>ARR10_ARATH (O49397) Two-component response regulator ARR10 (Receiver-like| protein 4) Length = 552 Score = 80.5 bits (197), Expect = 4e-15 Identities = 40/117 (34%), Positives = 67/117 (57%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D +++ LL +C Y V + A + L + +N+ DLV+++V MP + G LL Sbjct: 22 VDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMDGFKLL 81 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + + +PVIM+S + V K + GA D+L+KP+R ELK +WQH+ R+ Sbjct: 82 ELV---GLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVVRK 135
>ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2 (Receiver-like| protein 5) Length = 664 Score = 80.1 bits (196), Expect = 6e-15 Identities = 42/117 (35%), Positives = 65/117 (55%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D ++ +L C Y V A L +N D+V+++V MP + G LL Sbjct: 33 VDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMDGFKLL 92 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + + +PVIMMS +DS S V K ++ GAVD+L+KP+R LK +WQH+ R+ Sbjct: 93 EHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVRK 146
>ARR1_ARATH (Q940D0) Two-component response regulator ARR1| Length = 690 Score = 79.7 bits (195), Expect = 8e-15 Identities = 42/117 (35%), Positives = 66/117 (56%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D ++ +L C YEV A L ++ D+V+++V MP + G LL Sbjct: 42 VDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGFKLL 101 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + + +PVIMMS +DS S V K ++ GAVD+L+KP+R LK +WQH+ R+ Sbjct: 102 EHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRK 155
>ARR11_ARATH (Q9FXD6) Two-component response regulator ARR11 (Receiver-like| protein 3) Length = 521 Score = 79.7 bits (195), Expect = 8e-15 Identities = 42/117 (35%), Positives = 68/117 (58%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D ++ +L KC YEV + +A + L + ++ D+V+++V MP + G LL Sbjct: 16 VDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMDGFKLL 75 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + + +PVIMMS + S V K + GA D+L+KPIR ELK +WQH+ R+ Sbjct: 76 EHV---GLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLRK 129
>ARR12_ARATH (P62598) Two-component response regulator ARR12| Length = 596 Score = 78.6 bits (192), Expect = 2e-14 Identities = 40/116 (34%), Positives = 66/116 (56%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D ++ +LL C Y V + A + L + +N+ DLV+++V MP + G LL Sbjct: 22 VDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMDGFKLL 81 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWR 341 + + +PVIM+S + V K ++ GA D+L+KP+R ELK +WQH+ R Sbjct: 82 ELV---GLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVR 134
>ARR14_ARATH (Q8L9Y3) Two-component response regulator ARR14| Length = 382 Score = 74.7 bits (182), Expect = 2e-13 Identities = 41/117 (35%), Positives = 67/117 (57%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D ++ +L + Y+V A L + ++ DLVL++V MP ++G LL Sbjct: 16 VDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMNGYNLL 75 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 ++ + +PVIMMS + +TV ++ GA D+L+KPIR ELK +WQH+ RR Sbjct: 76 QQVGLLEM--DLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRR 130
>ARR7_ARATH (Q9ZWS7) Two-component response regulator ARR7| Length = 206 Score = 69.7 bits (169), Expect = 8e-12 Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 9/125 (7%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYL-----EDVQN----RIDLVLTEVAM 536 V++ R V+ LL +V + E+G A QYL + N +++L++T+ +M Sbjct: 29 VDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLKVNLIVTDYSM 88 Query: 535 PCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLW 356 P LSG LL KI S + +PV++MS + + + +CL +GA +FL+KP++ ++K + Sbjct: 89 PGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKLADVKRIK 148 Query: 355 QHIWR 341 Q I R Sbjct: 149 QLIMR 153
>ARR20_ARATH (Q9LZJ8) Putative two-component response regulator ARR20| Length = 426 Score = 69.3 bits (168), Expect = 1e-11 Identities = 35/107 (32%), Positives = 62/107 (57%) Frame = -2 Query: 658 VRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICK 479 ++ L+ + Y+V E+G +A +L ++ IDLV+ + MP ++G+ L+ I Sbjct: 54 LKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDINGLDALNIIGKQM--- 110 Query: 478 GIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +PV++MS TV + + GA DFLVKP+ K + LW+H++R+ Sbjct: 111 DLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRK 157
>ARR3_ARATH (Q9ZWS9) Two-component response regulator ARR3| Length = 231 Score = 67.8 bits (164), Expect = 3e-11 Identities = 38/125 (30%), Positives = 71/125 (56%), Gaps = 9/125 (7%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYL---------EDVQNRIDLVLTEVAM 536 V++ R V+ LL +V + ++G A ++L E + ++DL++T+ M Sbjct: 38 VDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVDLIITDYCM 97 Query: 535 PCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLW 356 P ++G LL KI + K +PV++MS + M+ + +CL +GA DFL+KP++ ++K L Sbjct: 98 PGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLADVKRLR 157 Query: 355 QHIWR 341 ++ R Sbjct: 158 SYLTR 162
>ARR4_ARATH (O82798) Two-component response regulator ARR4 (Response regulator| 1) Length = 259 Score = 67.4 bits (163), Expect = 4e-11 Identities = 37/123 (30%), Positives = 70/123 (56%), Gaps = 9/123 (7%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYL---------EDVQNRIDLVLTEVAM 536 V++ R V+ LL +V + ++G A ++L E + ++DL++T+ M Sbjct: 39 VDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLIITDYCM 98 Query: 535 PCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLW 356 P ++G LL KI S + +PV++MS + ++ + +CL +GA DFL+KP++ ++K L Sbjct: 99 PGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLADVKRLR 158 Query: 355 QHI 347 H+ Sbjct: 159 SHL 161
>ARR18_ARATH (Q9FGT7) Two-component response regulator ARR18| Length = 635 Score = 67.4 bits (163), Expect = 4e-11 Identities = 38/116 (32%), Positives = 59/116 (50%) Frame = -2 Query: 685 ENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLS 506 +N C R + LL +C Y V A + L + N DLV+++V MP G LL Sbjct: 25 DNPTCLRKL-EELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTDGFKLLE 83 Query: 505 KITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + +PVIM+S + +V K + GA D+LVKP+ EL+ +W H+ ++ Sbjct: 84 I----GLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKK 135
>ARR15_ARATH (Q7G8V2) Two-component response regulator ARR15| Length = 206 Score = 66.6 bits (161), Expect = 7e-11 Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 9/125 (7%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLE-DVQN--------RIDLVLTEVAM 536 V++ R V+ LL +V + E+G A QYL D N +++L++T+ +M Sbjct: 23 VDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLIVTDYSM 82 Query: 535 PCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLW 356 P L+G LL KI S + IPV++MS + + +C+ +GA +FL+KP++ ++K L Sbjct: 83 PGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLADVKRLK 142 Query: 355 QHIWR 341 + I R Sbjct: 143 ELIMR 147
>ARR17_ARATH (Q9FPR6) Two-component response regulator ARR17| Length = 153 Score = 65.9 bits (159), Expect = 1e-10 Identities = 37/124 (29%), Positives = 72/124 (58%), Gaps = 10/124 (8%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYL--------EDVQN--RIDLVLTEVA 539 V+++ R +V +L +V +AENGL A +YL + + N +++L++T+ Sbjct: 25 VDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVNLIITDYC 84 Query: 538 MPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 MP ++G LL K+ S K +PV+++S + + + KCL+ GA F+ KP++ ++++ L Sbjct: 85 MPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKLSDVEKL 144 Query: 358 WQHI 347 H+ Sbjct: 145 KCHL 148
>ARR6_ARATH (Q9ZWS6) Two-component response regulator ARR6| Length = 186 Score = 65.1 bits (157), Expect = 2e-10 Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLE-DVQNR--------IDLVLTEVAM 536 V++ R + LL +V ++ A QYL DV+ + ++L++T+ +M Sbjct: 30 VDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIMTDYSM 89 Query: 535 PCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 P ++G LL KI S + +PV++MS + + + +CL +GA DFL+KP++ +++K L Sbjct: 90 PGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSDVKRL 148
>CHEY_HELPY (P71403) Chemotaxis protein cheY homolog| Length = 124 Score = 65.1 bits (157), Expect = 2e-10 Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 1/109 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 512 V++ R +++ L + GYE V+ AE+G++AW+ L D +++T+ MP ++G+ L Sbjct: 6 VDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKL-DANADTKVLITDWNMPEMNGLDL 64 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 + K+ S S K IP+IM++ + V L G +++VKP LK Sbjct: 65 VKKVRSDSRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLK 113
>ARR5_ARATH (Q9SB04) Two-component response regulator ARR5 (Response reactor 2)| Length = 184 Score = 63.2 bits (152), Expect = 7e-10 Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 10/120 (8%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLE-DVQN---------RIDLVLTEVA 539 V++ R + LL +V ++ A QYL D +N +I+L++T+ + Sbjct: 30 VDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLIMTDYS 89 Query: 538 MPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 MP ++G LL KI S + IPV++MS + + + +CL +GA DFL+KP++ ++K L Sbjct: 90 MPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLADVKRL 149
>CHEY_HELPJ (Q9ZM64) Chemotaxis protein cheY homolog| Length = 124 Score = 62.8 bits (151), Expect = 1e-09 Identities = 33/109 (30%), Positives = 62/109 (56%), Gaps = 1/109 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 512 V++ R +++ L + GYE V+ AE+G++AW+ L D +++T+ MP ++G+ L Sbjct: 6 VDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKL-DANADTKVLITDWNMPEMNGLDL 64 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 + K+ + + K IP+IM++ + V L G +++VKP LK Sbjct: 65 VKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLK 113
>ZRAR_KLEOX (Q9APD9) Transcriptional regulatory protein zraR| Length = 443 Score = 61.2 bits (147), Expect = 3e-09 Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%) Frame = -2 Query: 679 DDCTRH--VVRALLXKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSGIGLL 509 DD H +++ALL GY V A NGL A LE V+ ++ DLVL ++ M + GI L Sbjct: 12 DDDISHCTILQALLRGWGYRVALANNGLQA---LEKVREKVFDLVLCDIRMAEMDGIETL 68 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 +I + + IPV++M+ S+ T + L GA+D+L+KP+ ++L+ Sbjct: 69 KEIKTFN--PSIPVLIMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQ 114
>ARR9_ARATH (O80366) Two-component response regulator ARR9 (Response reactor 4)| Length = 234 Score = 61.2 bits (147), Expect = 3e-09 Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 19/128 (14%) Frame = -2 Query: 667 RHVVRALLXKCGYEVISAENGLDAWQYLEDVQN-------------------RIDLVLTE 545 R ++ LL K +V + ++G A ++L Q+ ++L++T+ Sbjct: 21 RKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPVNHQVVEVNLIITD 80 Query: 544 VAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 MP ++G LL K+ S + IPV++MS + + + +CL +GA +F +KP+R +L Sbjct: 81 YCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFFLKPVRLADLN 140 Query: 364 TLWQHIWR 341 L H+ + Sbjct: 141 KLKPHMMK 148
>ARR19_ARATH (Q9M9B9) Putative two-component response regulator ARR19| Length = 407 Score = 60.8 bits (146), Expect = 4e-09 Identities = 30/107 (28%), Positives = 60/107 (56%) Frame = -2 Query: 658 VRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICK 479 ++ ++ + Y+V + A +L ++ I++V+ + MP + G+ L ITS Sbjct: 49 MKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGLQALKSITSKL--- 105 Query: 478 GIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +PV++MS ++ +V K GA D++VKP+++ + +WQHI R+ Sbjct: 106 DLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
>ARR16_ARATH (Q9SHC2) Two-component response regulator ARR16| Length = 164 Score = 60.5 bits (145), Expect = 5e-09 Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 12/126 (9%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLE--DVQNRID----------LVLTE 545 V+++ R +V LL +V +AEN L A +YL D ID L++T+ Sbjct: 34 VDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVSLIITD 93 Query: 544 VAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 MP ++G LL K+ S + +PV++MS + + + KCL+ GA F+ KP++ +++ Sbjct: 94 YCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPLKLADVE 153 Query: 364 TLWQHI 347 L H+ Sbjct: 154 KLKCHL 159
>ARR8_ARATH (O80365) Two-component response regulator ARR8 (Response reactor 3)| Length = 225 Score = 59.3 bits (142), Expect = 1e-08 Identities = 33/128 (25%), Positives = 67/128 (52%), Gaps = 19/128 (14%) Frame = -2 Query: 667 RHVVRALLXKCGYEVISAENGLDAWQYL-------------------EDVQNRIDLVLTE 545 R ++ LL K +V + ++G A ++L ++V+ I+L++T+ Sbjct: 21 RKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQEVE--INLIITD 78 Query: 544 VAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 MP ++G LL K+ + + IPV++MS + + + +CL +GA +F +KP++ +L Sbjct: 79 YCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFLKPVKLADLT 138 Query: 364 TLWQHIWR 341 L H+ + Sbjct: 139 KLKPHMMK 146
>ZRAR_ECO57 (Q8X613) Transcriptional regulatory protein zraR| Length = 441 Score = 58.5 bits (140), Expect = 2e-08 Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 3/108 (2%) Frame = -2 Query: 679 DDCTRH--VVRALLXKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSGIGLL 509 DD H +++ALL GY V A +G A LE V+ R+ DLVL +V M + GI L Sbjct: 12 DDDISHCTILQALLRGWGYNVALANSGRQA---LEQVRERVFDLVLCDVRMAEMDGIATL 68 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 +I + + IPV++M+ S+ T + L GA+D+L+KP+ + L+ Sbjct: 69 KEIKA--LNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
>NTRC_AZOBR (P45671) Nitrogen assimilation regulatory protein| Length = 481 Score = 57.4 bits (137), Expect = 4e-08 Identities = 33/106 (31%), Positives = 58/106 (54%) Frame = -2 Query: 685 ENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLS 506 ++D R V+ L + G+EV + N W+++ D Q DL++T+V MP +G+ L+ Sbjct: 10 DDDRAIRTVLTQALARLGHEVRTTGNASTLWRWVADGQG--DLIITDVVMPDENGLDLIP 67 Query: 505 KITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 +I I + +I+MS +++ T K +GA ++L KP EL Sbjct: 68 RIKK--IRPDLRIIVMSAQNTLITAVKAAERGAFEYLPKPFDLKEL 111
>NTRC_BRASR (P10576) Nitrogen assimilation regulatory protein| Length = 480 Score = 57.4 bits (137), Expect = 4e-08 Identities = 35/109 (32%), Positives = 56/109 (51%) Frame = -2 Query: 685 ENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLS 506 ++D R V+ L + GYEV N W+++ Q DLV+T+V MP + LL Sbjct: 10 DDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVS--QGEGDLVITDVVMPDENAFDLLP 67 Query: 505 KITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 +I + +PVI+MS ++ T + +GA ++L KP EL T+ Sbjct: 68 RIKK--MRPNLPVIVMSAQNTFMTAIRPSERGAYEYLPKPFDLKELITI 114
>YCF27_CYACA (Q9TLQ4) Probable transcriptional regulator ycf27 (OmpR-like| protein) Length = 249 Score = 57.4 bits (137), Expect = 4e-08 Identities = 37/117 (31%), Positives = 62/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++++ R +++ L GY V +A NG +A + + IDL++ +V MP L G G+ Sbjct: 17 VDDENNIRKILQTRLTLLGYSVSTACNGEEALKIF--TTHSIDLIILDVMMPKLDGYGVC 74 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +I S IP+IM++ + + L GA D+++KP EL+ Q I RR Sbjct: 75 QEIRKES---DIPIIMLTALEDVLDKVTGLELGADDYVIKPFSPRELEARIQSILRR 128
>ZRAR_ECOLI (P14375) Transcriptional regulatory protein zraR| Length = 441 Score = 57.0 bits (136), Expect = 5e-08 Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 3/108 (2%) Frame = -2 Query: 679 DDCTRH--VVRALLXKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSGIGLL 509 DD H +++ALL GY V A +G A LE V+ ++ DLVL +V M + GI L Sbjct: 12 DDDISHCTILQALLRGWGYNVALANSGRQA---LEQVREQVFDLVLCDVRMAEMDGIATL 68 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 +I + + IPV++M+ S+ T + L GA+D+L+KP+ + L+ Sbjct: 69 KEIKA--LNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
>CHEY_CAMJE (P71129) Chemotaxis protein cheY homolog| Length = 130 Score = 56.6 bits (135), Expect = 7e-08 Identities = 28/109 (25%), Positives = 62/109 (56%), Gaps = 1/109 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 512 V++ R +++ L + G++ V+ AE+G++AW L ++ + +++T+ MP ++G+ L Sbjct: 6 VDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKNED-VKVLITDWNMPEMNGLEL 64 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 + K+ + + +P+IM++ + V L G +++VKP LK Sbjct: 65 VKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKPFTPQVLK 113
>NTRC_RHIME (P10577) Nitrogen assimilation regulatory protein| Length = 484 Score = 55.8 bits (133), Expect = 1e-07 Identities = 34/106 (32%), Positives = 52/106 (49%) Frame = -2 Query: 685 ENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLS 506 ++D R V+ L + GY+V N W+++ DLV+T+V MP + LL Sbjct: 10 DDDAAIRTVLNQALSRAGYDVRITSNAATLWRWIAAGDG--DLVVTDVVMPDENAFDLLP 67 Query: 505 KITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 +I +PV++MS ++ T K KGA D+L KP EL Sbjct: 68 RIKKAR--PDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTEL 111
>APRR8_ARATH (O23100) Putative two-component response regulator-like APRR8| (Pseudo-response regulator 8) Length = 367 Score = 55.8 bits (133), Expect = 1e-07 Identities = 35/99 (35%), Positives = 55/99 (55%) Frame = -2 Query: 649 LLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIP 470 ++ KCGY+V++ D + + +IDLVL E + ++ LL KI SIC+ IP Sbjct: 32 MIRKCGYKVVATTRADDLPLIINNKDKKIDLVLAEFRLIEMNKYELLEKI--RSICE-IP 88 Query: 469 VIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQ 353 V+ +S + +CL +GA L KP+ +N+ K LWQ Sbjct: 89 VV-VSGAHVKDAIVECLCRGAKLCLEKPLMENDFKILWQ 126
>ZRAR_SALTY (P25852) Transcriptional regulatory protein zraR| Length = 441 Score = 55.8 bits (133), Expect = 1e-07 Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 3/108 (2%) Frame = -2 Query: 679 DDCTRH--VVRALLXKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSGIGLL 509 DD H +++ALL GY V A +G DA L V+ ++ DLVL +V M + GI L Sbjct: 12 DDDVSHCTILQALLRGWGYNVALAYSGHDA---LAQVREKVFDLVLCDVRMAEMDGIATL 68 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 +I + + IP+++M+ S+ T + L GA+D+L+KP+ + L+ Sbjct: 69 KEIKA--LNPAIPILIMTAFSSVETAVEALKAGALDYLIKPLDFDRLQ 114
>ZRAR_SALTI (Q8Z333) Transcriptional regulatory protein zraR| Length = 441 Score = 55.8 bits (133), Expect = 1e-07 Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 3/108 (2%) Frame = -2 Query: 679 DDCTRH--VVRALLXKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSGIGLL 509 DD H +++ALL GY V A +G DA L V+ ++ DLVL +V M + GI L Sbjct: 12 DDDVSHCTILQALLRGWGYNVALAYSGHDA---LAQVREKVFDLVLCDVRMAEMDGIATL 68 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 +I + + IP+++M+ S+ T + L GA+D+L+KP+ + L+ Sbjct: 69 KEIKA--LNPAIPILIMTAFSSVETAVEALKAGALDYLIKPLDFDRLQ 114
>PILG_PSEAE (P46384) Protein pilG| Length = 135 Score = 55.5 bits (132), Expect = 2e-07 Identities = 34/107 (31%), Positives = 51/107 (47%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 +++ R LL K G +VI+A +G DA + D I + ++ MP L G Sbjct: 13 IDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNI--IFVDIMMPRLDGYQTC 70 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 + I ++S K PVIM+S D + K G+ +L KP K EL Sbjct: 71 ALIKNNSAFKSTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEEL 117
>ATOC_ECOLI (Q06065) Acetoacetate metabolism regulatory protein atoC| (Ornithine/arginine decarboxylase inhibitor) (Ornithine decarboxylase antizyme) Length = 461 Score = 55.1 bits (131), Expect = 2e-07 Identities = 34/112 (30%), Positives = 56/112 (50%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++D R ++ G+E A NG A D+ D+VL ++ MP + GI L Sbjct: 10 VDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHP--DVVLMDIRMPEMDGIKAL 67 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQ 353 ++ SH PVI+M+ + T + L GA D+++KP +EL + Q Sbjct: 68 KEMRSHET--RTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQ 117
>YCF27_PORAE (P28835) Probable transcriptional regulator ycf27 (OmpR-like| protein) Length = 240 Score = 53.9 bits (128), Expect = 5e-07 Identities = 33/117 (28%), Positives = 61/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 ++++ R ++ L GY+VISA +G +A + + +LV+ ++ MP L G G+ Sbjct: 9 IDDEASIRRILETRLSIIGYDVISAADGEEALSIFK--REHPNLVVLDLMMPKLDGYGVC 66 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 ++ S +P+IM++ +S L GA D++VKP EL+ + + RR Sbjct: 67 QELRKES---DVPIIMLTALSDVSDRITGLELGADDYIVKPFSPKELEARIRSVLRR 120
>PILH_PSEAE (P43501) Protein pilH| Length = 121 Score = 53.5 bits (127), Expect = 6e-07 Identities = 32/107 (29%), Positives = 56/107 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++ + + A+L K G++V+ AENG D Q + D+VL ++ MP L+G Sbjct: 7 VDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALAR--QEKPDVVLMDIVMPGLNGFQAT 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 ++T + IPVI+++ D + +GA D+L KP+ + L Sbjct: 65 RQLTKDAETSAIPVIIVTTKDQETDKVWGKRQGARDYLTKPVDEETL 111
>PHOB_PSEAE (P23620) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 53.5 bits (127), Expect = 6e-07 Identities = 33/117 (28%), Positives = 55/117 (47%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++ R ++ L GYE + AEN A + D + DL+L + +P SGI L Sbjct: 9 VDDEAPIREMIAVALEMAGYECLEAENTQQAHAVIVD--RKPDLILLDWMLPGTSGIELA 66 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 ++ + IP+IM++ + L GA D++ KP EL + + RR Sbjct: 67 RRLKRDELTVDIPIIMLTAKGEEDNKIQGLEVGADDYITKPFSPRELVARLKAVLRR 123
>APRR4_ARATH (Q9FJ16) Putative two-component response regulator-like APRR4| (Pseudo-response regulator 4) Length = 292 Score = 53.1 bits (126), Expect = 8e-07 Identities = 32/103 (31%), Positives = 57/103 (55%) Frame = -2 Query: 646 LXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPV 467 L K Y+V A L + +NR DL + +V LS+I S +P+ Sbjct: 61 LQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNNAEGDIFRFLSEIGSEM---DLPI 117 Query: 466 IMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 I++S++DS+ +V K + GA D+L+KPIR +L+ +++H+ ++ Sbjct: 118 IIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHLVKK 160
>YCF29_PORPU (P51343) Probable transcriptional regulator ycf29| Length = 209 Score = 53.1 bits (126), Expect = 8e-07 Identities = 33/114 (28%), Positives = 55/114 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VEND ++ L G+ V A NGL+A+Q + + DL+++++ MP + G LL Sbjct: 8 VENDTVLSKAIQEYLIDQGFNVDIALNGLEAFQLAN--KYKFDLIISDIIMPIIDGYELL 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHI 347 K+ IPVI ++ K + G +L KP EL +L +++ Sbjct: 66 EKLRKIDKLAKIPVIFLTAKGMTKDRIKGYNMGCYGYLSKPFDPEELVSLIKNL 119
>GTCR_ANEMI (Q44929) Response regulator gtcR| Length = 242 Score = 52.8 bits (125), Expect = 1e-06 Identities = 30/97 (30%), Positives = 51/97 (52%) Frame = -2 Query: 661 VVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSIC 482 +++ L + Y +I A +G AW Y+ Q+ +DL + ++ MP L G L+ ++T+ Sbjct: 17 LLKLFLERESYRIIEAYDGEQAWNYIR--QHPVDLAIIDIMMPALDGFQLIKRLTNE--- 71 Query: 481 KGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNE 371 +PVI++S + S L GA DF+ KP E Sbjct: 72 YKLPVIILSAKNRDSDKILGLGLGADDFISKPFNPLE 108
>YRKP_BACSU (P54443) Hypothetical sensory transduction protein yrkP| Length = 231 Score = 52.8 bits (125), Expect = 1e-06 Identities = 32/107 (29%), Positives = 55/107 (51%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE+D+ ++ L + GYEV+ A++G A Q + D +DLV+ ++ MP +SGI Sbjct: 8 VEDDEDIGDLLEESLTRAGYEVLRAKDGKRALQLVND---SLDLVILDIMMPGISGIETC 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 I S +P++ ++ S + L G D++ KP + EL Sbjct: 65 QHIRKSS---NVPILFLTARSSTLDKTEGLLAGGDDYMTKPFSEEEL 108
>YCF27_CYAPA (P48259) Probable transcriptional regulator ycf27 (OmpR-like| protein) Length = 239 Score = 52.4 bits (124), Expect = 1e-06 Identities = 34/117 (29%), Positives = 60/117 (51%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++ R ++ L GYEV++A +G +A + +LV+ +V MP L G G+ Sbjct: 11 VDDEISIRRILETRLSMIGYEVVTAADGEEALTIFQ--LEHPNLVVLDVMMPKLDGYGVC 68 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 ++ S IP+IM++ ++ L GA D++VKP EL+ + + RR Sbjct: 69 QELRKES---DIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSLLRR 122
>YCF27_GUITH (O78428) Probable transcriptional regulator ycf27 (OmpR-like| protein) Length = 254 Score = 52.4 bits (124), Expect = 1e-06 Identities = 33/117 (28%), Positives = 59/117 (50%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++ R ++ L GY V++A +G +A Q D+V+ ++ MP L G G+ Sbjct: 20 VDDEASIRKILETRLSMIGYFVVTASDGEEALNLFH--QEMPDVVILDIMMPKLDGYGVC 77 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +I S +P+IM++ ++ L GA D++VKP EL+ + + RR Sbjct: 78 QEIRKDS---DVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRAVLRR 131
>PHOB_HAEIN (P45189) Phosphate regulon transcriptional regulatory protein phoB| Length = 231 Score = 52.0 bits (123), Expect = 2e-06 Identities = 31/117 (26%), Positives = 54/117 (46%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ R ++ L + Y+VI A + A + ++ L+L + +P SGI + Sbjct: 8 VEDECAIREMIALFLSQKYYDVIEASDFKTA---INKIKENPKLILLDWMLPGRSGIQFI 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 I IP+IM++ + CL+ GA D++ KP L + +WRR Sbjct: 65 QYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRR 121
>PHOP_SHIFL (Q83RR0) Virulence transcriptional regulatory protein phoP| Length = 223 Score = 52.0 bits (123), Expect = 2e-06 Identities = 29/117 (24%), Positives = 62/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ RH ++ + G++V AE+ +A YL + + D+ + ++ +P G+ L+ Sbjct: 6 VEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNE--HLPDIAIVDLGLPDEDGLSLI 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S+ + +P+++++ +S + LS GA D++ KP E+ Q + RR Sbjct: 64 RRWRSNDV--SLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118
>PHOP_ECOL6 (Q8CXZ9) Transcriptional regulatory protein phoP| Length = 223 Score = 52.0 bits (123), Expect = 2e-06 Identities = 29/117 (24%), Positives = 62/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ RH ++ + G++V AE+ +A YL + + D+ + ++ +P G+ L+ Sbjct: 6 VEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNE--HLPDIAIVDLGLPDEDGLSLI 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S+ + +P+++++ +S + LS GA D++ KP E+ Q + RR Sbjct: 64 RRWRSNDV--SLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118
>PHOP_ECO57 (Q8X738) Transcriptional regulatory protein phoP| Length = 223 Score = 52.0 bits (123), Expect = 2e-06 Identities = 29/117 (24%), Positives = 62/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ RH ++ + G++V AE+ +A YL + + D+ + ++ +P G+ L+ Sbjct: 6 VEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNE--HLPDIAIVDLGLPDEDGLSLI 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S+ + +P+++++ +S + LS GA D++ KP E+ Q + RR Sbjct: 64 CRWRSNDV--SLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118
>YCF27_PORPU (P51358) Probable transcriptional regulator ycf27 (OmpR-like| protein) Length = 243 Score = 52.0 bits (123), Expect = 2e-06 Identities = 35/117 (29%), Positives = 58/117 (49%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++ R ++ L GYEVI+A NG +A + LV+ +V MP L G G+ Sbjct: 11 VDDEASIRRILETRLTIIGYEVITASNGEEALIIFR--KEYPSLVVLDVMMPKLDGYGVC 68 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 ++ S +P+IM++ + L GA D++VKP EL+ + + RR Sbjct: 69 QELRKES---DVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122
>PHOP_ECOLI (P23836) Transcriptional regulatory protein phoP| Length = 223 Score = 51.6 bits (122), Expect = 2e-06 Identities = 29/117 (24%), Positives = 62/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ RH ++ + G++V AE+ +A YL + + D+ + ++ +P G+ L+ Sbjct: 6 VEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNE--HIPDIAIVDLGLPDEDGLSLI 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S+ + +P+++++ +S + LS GA D++ KP E+ Q + RR Sbjct: 64 RRWRSNDV--SLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118
>PHOP_SALTY (P14146) Virulence transcriptional regulatory protein phoP| Length = 224 Score = 51.2 bits (121), Expect = 3e-06 Identities = 30/117 (25%), Positives = 61/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ RH ++ L G++V +AE+ +A YL + + D+ + ++ +P G+ L+ Sbjct: 7 VEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLNE--HLPDIAIVDLGLPDEDGLSLI 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S + +PV++++ + + LS GA D++ KP E+ Q + RR Sbjct: 65 RRWRSSDV--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMRR 119
>PHOP_SALTI (Q8Z7H2) Virulence transcriptional regulatory protein phoP| Length = 224 Score = 51.2 bits (121), Expect = 3e-06 Identities = 30/117 (25%), Positives = 61/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ RH ++ L G++V +AE+ +A YL + + D+ + ++ +P G+ L+ Sbjct: 7 VEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLNE--HLPDIAIVDLGLPDEDGLSLI 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S + +PV++++ + + LS GA D++ KP E+ Q + RR Sbjct: 65 RRWRSSDV--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMRR 119
>PHOP_SALPA (Q5PMJ1) Virulence transcriptional regulatory protein phoP| Length = 224 Score = 51.2 bits (121), Expect = 3e-06 Identities = 30/117 (25%), Positives = 61/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ RH ++ L G++V +AE+ +A YL + + D+ + ++ +P G+ L+ Sbjct: 7 VEDNALLRHHLKVQLQDSGHQVDAAEDAREADYYLNE--HLPDIAIVDLGLPDEDGLSLI 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S + +PV++++ + + LS GA D++ KP E+ Q + RR Sbjct: 65 RRWRSSDV--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMRR 119
>YFHA_ECOLI (P0AFU4) Hypothetical protein yfhA (ORF-2)| Length = 444 Score = 50.8 bits (120), Expect = 4e-06 Identities = 29/107 (27%), Positives = 59/107 (55%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D ++ L GY V++AE+G + + L + ++DLV++++ M + G+ L Sbjct: 11 VDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLN--REKVDLVISDLRMDEMDGMQLF 68 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 ++I + G+PVI+++ + S+ +G FL KP+ K+ L Sbjct: 69 AEI--QKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDAL 113
>YFHA_ECO57 (P0AFU5) Hypothetical protein yfhA| Length = 444 Score = 50.8 bits (120), Expect = 4e-06 Identities = 29/107 (27%), Positives = 59/107 (55%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D ++ L GY V++AE+G + + L + ++DLV++++ M + G+ L Sbjct: 11 VDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLN--REKVDLVISDLRMDEMDGMQLF 68 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 ++I + G+PVI+++ + S+ +G FL KP+ K+ L Sbjct: 69 AEI--QKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDAL 113
>SRRA_STAAW (Q7A0U4) Transcriptional regulatory protein srrA (Staphylococcal| respiratory response protein A) Length = 241 Score = 50.4 bits (119), Expect = 5e-06 Identities = 29/117 (24%), Positives = 61/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++D R +++ L + +E+ A NG +A++ ++N +L ++ +P + GI + Sbjct: 8 VDDEDRIRRLLKMYLERESFEIHEASNGQEAYELA--MENNYACILLDLMLPEMDGIQVA 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +K+ H K P+IM++ + + GA D++VKP E+ + + RR Sbjct: 66 TKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>SRRA_STAAU (Q9L524) Transcriptional regulatory protein srrA (Staphylococcal| respiratory response protein A) Length = 241 Score = 50.4 bits (119), Expect = 5e-06 Identities = 29/117 (24%), Positives = 61/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++D R +++ L + +E+ A NG +A++ ++N +L ++ +P + GI + Sbjct: 8 VDDEDRIRRLLKMYLERESFEIHEASNGQEAYELA--MENNYACILLDLMLPEMDGIQVA 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +K+ H K P+IM++ + + GA D++VKP E+ + + RR Sbjct: 66 TKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>SRRA_STAAS (Q6G972) Transcriptional regulatory protein srrA (Staphylococcal| respiratory response protein A) Length = 241 Score = 50.4 bits (119), Expect = 5e-06 Identities = 29/117 (24%), Positives = 61/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++D R +++ L + +E+ A NG +A++ ++N +L ++ +P + GI + Sbjct: 8 VDDEDRIRRLLKMYLERESFEIHEASNGQEAYELA--MENNYACILLDLMLPEMDGIQVA 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +K+ H K P+IM++ + + GA D++VKP E+ + + RR Sbjct: 66 TKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>SRRA_STAAR (Q6GGK6) Transcriptional regulatory protein srrA (Staphylococcal| respiratory response protein A) Length = 241 Score = 50.4 bits (119), Expect = 5e-06 Identities = 29/117 (24%), Positives = 61/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++D R +++ L + +E+ A NG +A++ ++N +L ++ +P + GI + Sbjct: 8 VDDEDRIRRLLKMYLERESFEIHEASNGQEAYELA--MENNYACILLDLMLPEMDGIQVA 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +K+ H K P+IM++ + + GA D++VKP E+ + + RR Sbjct: 66 TKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>SRRA_STAAN (Q7A5H6) Transcriptional regulatory protein srrA (Staphylococcal| respiratory response protein A) Length = 241 Score = 50.4 bits (119), Expect = 5e-06 Identities = 29/117 (24%), Positives = 61/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++D R +++ L + +E+ A NG +A++ ++N +L ++ +P + GI + Sbjct: 8 VDDEDRIRRLLKMYLERESFEIHEASNGQEAYELA--MENNYACILLDLMLPEMDGIQVA 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +K+ H K P+IM++ + + GA D++VKP E+ + + RR Sbjct: 66 TKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>SRRA_STAAM (Q7A2R6) Transcriptional regulatory protein srrA (Staphylococcal| respiratory response protein A) Length = 241 Score = 50.4 bits (119), Expect = 5e-06 Identities = 29/117 (24%), Positives = 61/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++D R +++ L + +E+ A NG +A++ ++N +L ++ +P + GI + Sbjct: 8 VDDEDRIRRLLKMYLERESFEIHEASNGQEAYELA--MENNYACILLDLMLPEMDGIQVA 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +K+ H K P+IM++ + + GA D++VKP E+ + + RR Sbjct: 66 TKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>SRRA_STAAC (Q5HFT0) Transcriptional regulatory protein srrA (Staphylococcal| respiratory response protein A) Length = 241 Score = 50.4 bits (119), Expect = 5e-06 Identities = 29/117 (24%), Positives = 61/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++D R +++ L + +E+ A NG +A++ ++N +L ++ +P + GI + Sbjct: 8 VDDEDRIRRLLKMYLERESFEIHEASNGQEAYELA--MENNYACILLDLMLPEMDGIQVA 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +K+ H K P+IM++ + + GA D++VKP E+ + + RR Sbjct: 66 TKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALLRR 119
>PHOP_SALCH (Q57QC3) Virulence transcriptional regulatory protein phoP| Length = 224 Score = 50.1 bits (118), Expect = 7e-06 Identities = 30/117 (25%), Positives = 60/117 (51%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ RH ++ L G++V + E+ +A YL + + D+ + ++ +P G+ L+ Sbjct: 7 VEDNALLRHHLKVQLQDSGHQVDATEDAREADYYLNE--HLPDIAIVDLGLPDEDGLSLI 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S I +PV++++ + + LS GA D++ KP E+ Q + RR Sbjct: 65 RRWRSSDI--SLPVLVLTAREGWQDKVEVLSSGADDYVTKPFHIEEVMARMQALMRR 119
>APRR2_ARATH (Q6LA43) Two-component response regulator-like APRR2| (Pseudo-response regulator 2) (TOC2 protein) Length = 535 Score = 50.1 bits (118), Expect = 7e-06 Identities = 19/43 (44%), Positives = 31/43 (72%) Frame = -2 Query: 475 IPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHI 347 +P IM+S + ++T KC++ GAV+FL KP+ +LK +WQH+ Sbjct: 96 LPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHV 138
>YCF27_GALSU (P28257) Probable transcriptional regulator ycf27 (OmpR-like| protein) Length = 255 Score = 49.7 bits (117), Expect = 8e-06 Identities = 33/116 (28%), Positives = 58/116 (50%) Frame = -2 Query: 685 ENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLS 506 +++ R ++ L GYEV++A +G A + +LV+ +V MP + G G+ Sbjct: 14 DDESSIRRILETRLSIIGYEVLTAPDGRSALFLFH--KEHPNLVVLDVMMPKIDGYGVCQ 71 Query: 505 KITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +I S IP+IM++ ++ L GA D++VKP EL+ + + RR Sbjct: 72 EIRKES---DIPIIMLTALGDVTDRITGLELGADDYVVKPFSPKELEARIRCVLRR 124
>FRZE_MYXXA (P18769) Gliding motility regulatory protein (EC 2.7.13.3)| Length = 777 Score = 49.7 bits (117), Expect = 8e-06 Identities = 34/100 (34%), Positives = 51/100 (51%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++ R AL+ G+ V A++G +A Y++ N DL+LT+V MP L G L Sbjct: 664 VDDSPIARATEGALVKALGHSVEEAQDGEEA--YVKVQNNTYDLILTDVQMPKLDGFSLA 721 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVK 389 ++ S IPVI++S S + L GA +LVK Sbjct: 722 RRLKSTPAVARIPVIILSSLASPEDKRRGLDAGADAYLVK 761
>HNR_SHIFL (P0AEV3) Protein hnr| Length = 337 Score = 49.3 bits (116), Expect = 1e-05 Identities = 29/103 (28%), Positives = 56/103 (54%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ R ++ + G + A +G+DA + L DL++ ++AMP ++G+ LL Sbjct: 13 VEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTP--DLMICDIAMPRMNGLKLL 70 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIR 380 I + PV+++S ++M+ + K L G D L+KP++ Sbjct: 71 EHIRNRG--DQTPVLVISATENMADIAKALRLGVEDVLLKPVK 111
>HNR_ECOLI (P0AEV1) Protein hnr| Length = 337 Score = 49.3 bits (116), Expect = 1e-05 Identities = 29/103 (28%), Positives = 56/103 (54%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ R ++ + G + A +G+DA + L DL++ ++AMP ++G+ LL Sbjct: 13 VEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTP--DLMICDIAMPRMNGLKLL 70 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIR 380 I + PV+++S ++M+ + K L G D L+KP++ Sbjct: 71 EHIRNRG--DQTPVLVISATENMADIAKALRLGVEDVLLKPVK 111
>HNR_ECO57 (P0AEV2) Protein hnr| Length = 337 Score = 49.3 bits (116), Expect = 1e-05 Identities = 29/103 (28%), Positives = 56/103 (54%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ R ++ + G + A +G+DA + L DL++ ++AMP ++G+ LL Sbjct: 13 VEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTP--DLMICDIAMPRMNGLKLL 70 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIR 380 I + PV+++S ++M+ + K L G D L+KP++ Sbjct: 71 EHIRNRG--DQTPVLVISATENMADIAKALRLGVEDVLLKPVK 111
>RCSC_SALTI (Q56128) Sensor protein rcsC (EC 2.7.13.3) (Capsular synthesis| regulator component C) Length = 948 Score = 48.9 bits (115), Expect = 1e-05 Identities = 32/108 (29%), Positives = 54/108 (50%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++ R ++ L GY+ +A +G+DA L +N ID+VL++V MP + G L Sbjct: 830 VDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLS--KNAIDIVLSDVNMPNMDGYRLT 887 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 +I + +PV+ ++ N +CL G L KP+ + LK Sbjct: 888 QRIRQLGLT--LPVVGVTANALAEEKQRCLESGMDSCLSKPVTLDALK 933
>AFSQ1_STRCO (Q04942) Transcriptional regulatory protein afsQ1| Length = 225 Score = 48.9 bits (115), Expect = 1e-05 Identities = 31/117 (26%), Positives = 59/117 (50%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 +E+DD R + L + G+ V +A +G D + L + R DL++ +V +P + G + Sbjct: 7 IEDDDAIRTALELSLTRQGHRVATAASGEDGLKLLRE--QRPDLIVLDVMLPGIDGFEVC 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +I +P+I+++ + V L GA D++VKP++ L + + RR Sbjct: 65 RRIRRTD---QLPIILLTARNDDIDVVVGLESGADDYVVKPVQGRVLDARIRAVLRR 118
>CTRA_CAUCR (Q45994) Cell cycle transcriptional regulator ctrA (Response| regulator sokA) Length = 231 Score = 48.5 bits (114), Expect = 2e-05 Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 3/110 (2%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISA---ENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 518 +E+D T + +L G+ V + E G+D + + DL+L ++ +P +SGI Sbjct: 6 IEDDSATAQTIELMLKSEGFNVYTTDLGEEGVDLGKIYD-----YDLILLDLNLPDMSGI 60 Query: 517 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 +L + I P++++S + + T K + GA D++ KP K+E+ Sbjct: 61 DVLRTLRVAKI--NTPIMILSGSSEIDTKVKTFAGGADDYMTKPFHKDEM 108
>LUXO_VIBPA (Q87MX7) Regulatory protein luxO| Length = 453 Score = 48.5 bits (114), Expect = 2e-05 Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSGIGL 512 VE+ + R+ L G ++ G DA +E + +RI DL+L ++ +P ++G+ + Sbjct: 2 VEDTASVAALYRSYLTPLGIDINIVGTGRDA---IESLNHRIPDLILLDLRLPDMTGMDV 58 Query: 511 LSKIT-SHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 L + SH +P+I M+ + S+ T + + G+ DFL+KP + L+ Sbjct: 59 LHAVKKSHP---DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLR 105
>LUXO_VIBHA (P54299) Luminescence regulatory protein luxO| Length = 453 Score = 48.5 bits (114), Expect = 2e-05 Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSGIGL 512 VE+ + R+ L G ++ G DA +E + +RI DL+L ++ +P ++G+ + Sbjct: 2 VEDTASVAALYRSYLTPLGIDINIVGTGRDA---IESLNHRIPDLILLDLRLPDMTGMDV 58 Query: 511 LSKIT-SHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 L + SH +P+I M+ + S+ T + + G+ DFL+KP + L+ Sbjct: 59 LHAVKKSHP---DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLR 105
>RCSC_SALTY (P58662) Sensor protein rcsC (EC 2.7.13.3) (Capsular synthesis| regulator component C) Length = 948 Score = 48.5 bits (114), Expect = 2e-05 Identities = 32/108 (29%), Positives = 54/108 (50%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++ R ++ L GY+ +A +G+DA L +N ID+VL++V MP + G L Sbjct: 830 VDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLS--KNAIDIVLSDVNMPNMDGYRLT 887 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 +I + +PV+ ++ N +CL G L KP+ + LK Sbjct: 888 QRIRQLGLT--LPVVGVTANALAEEKQRCLESGMDSCLSKPVTLDVLK 933
>RCSC_ECOLI (P14376) Sensor kinase protein rcsC (EC 2.7.13.3) (Capsular synthesis| regulator component C) Length = 949 Score = 48.5 bits (114), Expect = 2e-05 Identities = 32/108 (29%), Positives = 54/108 (50%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++ R ++ L GY+ +A +G+DA L +N ID+VL++V MP + G L Sbjct: 830 VDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLS--KNHIDIVLSDVNMPNMDGYRLT 887 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 +I + +PVI ++ N +CL G L KP+ + +K Sbjct: 888 QRIRQLGLT--LPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIK 933
>CHEY_LISMO (P0A4H5) Chemotaxis protein cheY| Length = 119 Score = 48.1 bits (113), Expect = 2e-05 Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%) Frame = -2 Query: 667 RHVVRALLXKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSH 491 R +++ ++ +EV++ AENGL+A + ++V+ D+V ++ MP + G+ L++I + Sbjct: 14 RTMIKNIVKDSDFEVVAEAENGLEAVKKYDEVKP--DIVTLDITMPEMDGLEALAQIMAK 71 Query: 490 SICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 VIM S V + KGA DF+VKP + + + Sbjct: 72 D--PSAKVIMCSAMGQQGMVVDAIKKGAKDFIVKPFQADRV 110
>CHEY_LISIN (P0A4H6) Chemotaxis protein cheY| Length = 119 Score = 48.1 bits (113), Expect = 2e-05 Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 1/101 (0%) Frame = -2 Query: 667 RHVVRALLXKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSH 491 R +++ ++ +EV++ AENGL+A + ++V+ D+V ++ MP + G+ L++I + Sbjct: 14 RTMIKNIVKDSDFEVVAEAENGLEAVKKYDEVKP--DIVTLDITMPEMDGLEALAQIMAK 71 Query: 490 SICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 VIM S V + KGA DF+VKP + + + Sbjct: 72 D--PSAKVIMCSAMGQQGMVVDAIKKGAKDFIVKPFQADRV 110
>CHEY_BACSU (P24072) Chemotaxis protein cheY homolog| Length = 119 Score = 48.1 bits (113), Expect = 2e-05 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 1/101 (0%) Frame = -2 Query: 667 RHVVRALLXKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSH 491 R +++ +L K G+EV++ AENG A + ++ + DLV ++ MP + GI L +I Sbjct: 14 RMMIKDILVKNGFEVVAEAENGAQAVEKYKE--HSPDLVTMDITMPEMDGITALKEIKQ- 70 Query: 490 SICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 I +IM S S V + GA DF+VKP + + + Sbjct: 71 -IDAQARIIMCSAMGQQSMVIDAIQAGAKDFIVKPFQADRV 110
>ARCA_HAEIN (P44918) Aerobic respiration control protein arcA homolog| Length = 236 Score = 48.1 bits (113), Expect = 2e-05 Identities = 30/107 (28%), Positives = 55/107 (51%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ TR+ ++ + GY+V AENG++ L + I+LV+ ++ +P +G+ L Sbjct: 9 VEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHIL--ANHNINLVVMDINLPGKNGLLLA 66 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 ++ +P+I ++ D+ L GA D+L KP EL Sbjct: 67 RELREE---LSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPREL 110
>DLTR_STRA5 (P0A4I0) Transcriptional regulatory protein dltR| Length = 224 Score = 47.8 bits (112), Expect = 3e-05 Identities = 30/107 (28%), Positives = 52/107 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ ++ALL GY V A +G D +Y+ + DLVL ++ +P SG+ +L Sbjct: 6 VEDEKSIAEAIQALLADKGYSVDLAFDGDDGLEYI--LTGLYDLVLLDIMLPKRSGLSVL 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 ++ + P+I ++ L GA D++ KP +EL Sbjct: 64 KRVREAGL--ETPIIFLTAKSQTYDKVNGLDLGADDYITKPFEADEL 108
>DLTR_STRA3 (P0A4H9) Transcriptional regulatory protein dltR| Length = 224 Score = 47.8 bits (112), Expect = 3e-05 Identities = 30/107 (28%), Positives = 52/107 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ ++ALL GY V A +G D +Y+ + DLVL ++ +P SG+ +L Sbjct: 6 VEDEKSIAEAIQALLADKGYSVDLAFDGDDGLEYI--LTGLYDLVLLDIMLPKRSGLSVL 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 ++ + P+I ++ L GA D++ KP +EL Sbjct: 64 KRVREAGL--ETPIIFLTAKSQTYDKVNGLDLGADDYITKPFEADEL 108
>SILR_SALTY (Q9ZHD3) Probable transcriptional regulatory protein silR| Length = 228 Score = 47.8 bits (112), Expect = 3e-05 Identities = 34/117 (29%), Positives = 60/117 (51%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE+D T + L + G+ V A+NGL + + DLV+ ++ +P ++G ++ Sbjct: 6 VEDDIKTGEYLSKGLTEAGFVVDHADNGLTGYHLAMTAE--YDLVILDIMLPDVNGWDII 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S KG+PV++++ ++ K L GA D+LVKP EL + + RR Sbjct: 64 RMLRSAG--KGMPVLLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118
>CHEY_SALTY (P0A2D5) Chemotaxis protein cheY| Length = 128 Score = 47.8 bits (112), Expect = 3e-05 Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 1/118 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 512 V++ R +VR LL + G+ V AE+G+DA L+ ++++ MP + G+ L Sbjct: 10 VDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQ--AGGFGFIISDWNMPNMDGLEL 67 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 L I + S +PV+M++ + GA ++VKP L+ I+ + Sbjct: 68 LKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>CHEY_SALTI (P0A2D6) Chemotaxis protein cheY| Length = 128 Score = 47.8 bits (112), Expect = 3e-05 Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 1/118 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 512 V++ R +VR LL + G+ V AE+G+DA L+ ++++ MP + G+ L Sbjct: 10 VDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQ--AGGFGFIISDWNMPNMDGLEL 67 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 L I + S +PV+M++ + GA ++VKP L+ I+ + Sbjct: 68 LKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>NTRC_ECOLI (P0AFB8) Nitrogen regulation protein NR(I)| Length = 469 Score = 47.8 bits (112), Expect = 3e-05 Identities = 30/110 (27%), Positives = 52/110 (47%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D R V+ L G + ENG + + L D++L+++ MP + G+ LL Sbjct: 9 VDDDSSIRWVLERALAGAGLTCTTFENGAEVLEAL--ASKTPDVLLSDIRMPGMDGLALL 66 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 +I +PVI+M+ + + +GA D+L KP +E L Sbjct: 67 KQIKQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVAL 114
>NTRC_ECO57 (P0AFB9) Nitrogen regulation protein NR(I)| Length = 469 Score = 47.8 bits (112), Expect = 3e-05 Identities = 30/110 (27%), Positives = 52/110 (47%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D R V+ L G + ENG + + L D++L+++ MP + G+ LL Sbjct: 9 VDDDSSIRWVLERALAGAGLTCTTFENGAEVLEAL--ASKTPDVLLSDIRMPGMDGLALL 66 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 +I +PVI+M+ + + +GA D+L KP +E L Sbjct: 67 KQIKQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVAL 114
>CHEB_HALMA (Q5V0B3) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 369 Score = 47.8 bits (112), Expect = 3e-05 Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 3/97 (3%) Frame = -2 Query: 667 RHVVRALLXKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSH 491 R V+ +L G +V++ A +G +A + +++R D+V +V MP ++GI +I + Sbjct: 17 RSVISDILSDGGIDVVAQARDGEEAVSAV--IEHRPDVVTMDVEMPVMNGIEATERIMAE 74 Query: 490 SICKGIPVIMMSKN--DSMSTVFKCLSKGAVDFLVKP 386 S PV+M+S + ++ F+ L KGAVDF KP Sbjct: 75 S---PTPVLMLSAHTDENADVTFEALDKGAVDFFTKP 108
>LUXO_VIBVY (Q7MM78) Regulatory protein luxO| Length = 453 Score = 47.8 bits (112), Expect = 3e-05 Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSGIGL 512 VE+ + R+ L G ++ G DA ++ +++RI DL+L ++ +P ++G+ + Sbjct: 2 VEDTASVAALYRSYLMPLGIDINIVGTGRDA---IDSLKHRIPDLILLDLRLPDMTGMDV 58 Query: 511 LSKI-TSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 L + SH +P+I M+ + S+ T + + G+ DFL+KP + L+ Sbjct: 59 LHAVKASHP---DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLR 105
>LUXO_VIBVU (Q8CWJ5) Regulatory protein luxO| Length = 453 Score = 47.8 bits (112), Expect = 3e-05 Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSGIGL 512 VE+ + R+ L G ++ G DA ++ +++RI DL+L ++ +P ++G+ + Sbjct: 2 VEDTASVAALYRSYLMPLGIDINIVGTGRDA---IDSLKHRIPDLILLDLRLPDMTGMDV 58 Query: 511 LSKI-TSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 L + SH +P+I M+ + S+ T + + G+ DFL+KP + L+ Sbjct: 59 LHAVKASHP---DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLR 105
>DCTR_BACME (P39486) Probable C4-dicarboxylate response regulator dctR| Length = 228 Score = 47.4 bits (111), Expect = 4e-05 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKC-GYEVISA-ENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIG 515 +E+D + V R + + G+ VI+A NGL+ Q ++ Q++ DL + ++ MP G+ Sbjct: 11 IEDDPMVQEVNRQFIEQVEGFTVIAAASNGLEGVQLIK--QHQPDLTIIDMYMPSQDGLT 68 Query: 514 LLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 L +I ++ VI ++ + TV K L GAVD+++KP + +K Sbjct: 69 TLQQIRANGY--KTDVIAVTAASDIETVRKVLQYGAVDYIMKPFKFERMK 116
>CHEY_YERPE (Q8D0P1) Chemotaxis protein cheY| Length = 128 Score = 47.4 bits (111), Expect = 4e-05 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 1/118 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 512 V++ R +VR LL + G+ V AE+G+DA L D V+++ MP + G+ L Sbjct: 10 VDDFSTMRRIVRNLLKELGFHNVEEAEDGVDALNKLR--AGGFDFVVSDWNMPNMDGLDL 67 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 L I + +PV+M++ + GA ++VKP L+ I+ + Sbjct: 68 LKTIRTDGALATLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>CHEY_ECOL6 (Q8FGP6) Chemotaxis protein cheY| Length = 128 Score = 47.4 bits (111), Expect = 4e-05 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 1/118 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 512 V++ R +VR LL + G+ V AE+GLDA L+ V+++ MP + G+ L Sbjct: 10 VDDFSTMRRIVRNLLKELGFNNVEEAEDGLDALNKLQ--AGGYGFVISDWNMPNMDGLEL 67 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 L I + +PV+M++ + GA ++VKP L+ I+ + Sbjct: 68 LKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>CHEY_YEREN (Q93P00) Chemotaxis protein cheY| Length = 128 Score = 47.0 bits (110), Expect = 6e-05 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 1/118 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 512 V++ R +VR LL + G+ V AE+G+DA L D V+++ MP + G+ L Sbjct: 10 VDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLRT--GGFDFVVSDWNMPNMDGLDL 67 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 L I + +PV+M++ + GA ++VKP L+ I+ + Sbjct: 68 LKTIRADGALGTLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>PHOP_BACSU (P13792) Alkaline phosphatase synthesis transcriptional regulatory| protein phoP Length = 240 Score = 47.0 bits (110), Expect = 6e-05 Identities = 30/117 (25%), Positives = 60/117 (51%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++++ +++ L + GY+VI+A +G +A + E + DL++ +V +P L GI + Sbjct: 8 VDDEESIVTLLQYNLERSGYDVITASDGEEALKKAET--EKPDLIVLDVMLPKLDGIEVC 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 ++ + P++M++ D L GA D++ KP E+ + I RR Sbjct: 66 KQLRQQKLM--FPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKAILRR 120
>RCAC_FREDI (Q01473) Protein rcaC| Length = 651 Score = 46.6 bits (109), Expect = 7e-05 Identities = 31/117 (26%), Positives = 57/117 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE+DD V+ L Y V ++G W Y + DL++ ++ +P L GI L Sbjct: 6 VEDDDVLIKVLTKNLTTHHYIVDVVKDGEMGWTYGSTFE--YDLIILDIMLPNLDGISLC 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + + +P+++++ D+++ + L GA D++VKP EL + + RR Sbjct: 64 KRFRAQGYT--VPILLLTAQDNITAKVQGLDAGADDYVVKPFDPIELIARIRALLRR 118 Score = 38.5 bits (88), Expect = 0.020 Identities = 26/107 (24%), Positives = 51/107 (47%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 +++D + LL G++V + + W L+ V D ++ +V MP ++G L Sbjct: 531 LDDDQDWLRTLPTLLKPWGFKVTTLADPQQFWTVLQAVTP--DALVLDVNMPQINGFELC 588 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 + S + +PV+ +S +T + + G D+L KP++ EL Sbjct: 589 QLLRSDPHWQRLPVLFLSVLTDPTTQNQAFAVGGDDYLCKPVKGVEL 635
>CPXR_SHIFL (P0AE90) Transcriptional regulatory protein cpxR| Length = 232 Score = 46.6 bits (109), Expect = 7e-05 Identities = 39/117 (33%), Positives = 55/117 (47%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D +++ LL G+ VI A +G A L+D IDL+L +V MP +GI L Sbjct: 7 VDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDD---SIDLLLLDVMMPKKNGIDTL 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + PVIM++ S L GA D+L KP EL + I RR Sbjct: 64 KALRQ---THQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRR 117
>CPXR_ECOLI (P0AE88) Transcriptional regulatory protein cpxR| Length = 232 Score = 46.6 bits (109), Expect = 7e-05 Identities = 39/117 (33%), Positives = 55/117 (47%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D +++ LL G+ VI A +G A L+D IDL+L +V MP +GI L Sbjct: 7 VDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDD---SIDLLLLDVMMPKKNGIDTL 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + PVIM++ S L GA D+L KP EL + I RR Sbjct: 64 KALRQ---THQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRR 117
>CPXR_ECO57 (P0AE89) Transcriptional regulatory protein cpxR| Length = 232 Score = 46.6 bits (109), Expect = 7e-05 Identities = 39/117 (33%), Positives = 55/117 (47%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D +++ LL G+ VI A +G A L+D IDL+L +V MP +GI L Sbjct: 7 VDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDD---SIDLLLLDVMMPKKNGIDTL 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + PVIM++ S L GA D+L KP EL + I RR Sbjct: 64 KALRQ---THQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRR 117
>PHOB_SHIFL (P45607) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 46.6 bits (109), Expect = 7e-05 Identities = 32/117 (27%), Positives = 57/117 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ R +V +L + G++ + AE+ A L + DL+L + +P SGI + Sbjct: 8 VEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWP--DLILLDWMLPGGSGIQFI 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S+ + IPV+M++ + L GA D++ KP EL + + RR Sbjct: 66 KHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122
>PHOB_SHIDY (P45606) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 46.6 bits (109), Expect = 7e-05 Identities = 32/117 (27%), Positives = 57/117 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ R +V +L + G++ + AE+ A L + DL+L + +P SGI + Sbjct: 8 VEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWP--DLILLDWMLPGGSGIQFI 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S+ + IPV+M++ + L GA D++ KP EL + + RR Sbjct: 66 KHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122
>PHOB_ECOLI (P0AFJ5) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 46.6 bits (109), Expect = 7e-05 Identities = 32/117 (27%), Positives = 57/117 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ R +V +L + G++ + AE+ A L + DL+L + +P SGI + Sbjct: 8 VEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWP--DLILLDWMLPGGSGIQFI 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S+ + IPV+M++ + L GA D++ KP EL + + RR Sbjct: 66 KHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122
>PHOB_ECO57 (P0AFJ6) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 46.6 bits (109), Expect = 7e-05 Identities = 32/117 (27%), Positives = 57/117 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ R +V +L + G++ + AE+ A L + DL+L + +P SGI + Sbjct: 8 VEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWP--DLILLDWMLPGGSGIQFI 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S+ + IPV+M++ + L GA D++ KP EL + + RR Sbjct: 66 KHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122
>YCBL_BACSU (P42244) Hypothetical sensory transduction protein ycbL| Length = 226 Score = 46.2 bits (108), Expect = 9e-05 Identities = 34/107 (31%), Positives = 52/107 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE+D +V L K G+ ++ A +G + + + Q DLVL ++ +P L+G+ L Sbjct: 3 VEDDHSISEMVDHYLTKEGFGIVHAFDGEEGIRLFQ--QGSYDLVLLDIMLPKLNGMDFL 60 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 I S IPV+M+S D L GA D++ KP EL Sbjct: 61 KIIREKS---NIPVLMISAKDGDVDKALGLGFGADDYIAKPFSMIEL 104
>PRRA_MYCTU (P0A5Z6) Transcriptional regulatory protein prrA| Length = 233 Score = 46.2 bits (108), Expect = 9e-05 Identities = 29/99 (29%), Positives = 53/99 (53%) Frame = -2 Query: 634 GYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMS 455 G+EV +A +G +A + +NR D ++ ++ MP L G+ +++ + ++ +PV ++S Sbjct: 31 GFEVATAVDGAEALR--SATENRPDAIVLDINMPVLDGVSVVTAL--RAMDNDVPVCVLS 86 Query: 454 KNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 S+ L GA D+LVKP EL + + RR Sbjct: 87 ARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRR 125
>PRRA_MYCBO (P0A5Z7) Transcriptional regulatory protein prrA| Length = 233 Score = 46.2 bits (108), Expect = 9e-05 Identities = 29/99 (29%), Positives = 53/99 (53%) Frame = -2 Query: 634 GYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMS 455 G+EV +A +G +A + +NR D ++ ++ MP L G+ +++ + ++ +PV ++S Sbjct: 31 GFEVATAVDGAEALR--SATENRPDAIVLDINMPVLDGVSVVTAL--RAMDNDVPVCVLS 86 Query: 454 KNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 S+ L GA D+LVKP EL + + RR Sbjct: 87 ARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRR 125
>APRR6_ARATH (Q9C9F6) Putative two-component response regulator-like APRR6| (Pseudo-response regulator 6) Length = 663 Score = 46.2 bits (108), Expect = 9e-05 Identities = 26/117 (22%), Positives = 57/117 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 +++D + + ++L + V+S + A +E + I L++ + MP + L Sbjct: 18 IDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHIDSHSFL 77 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + + + K IP+I+++ L+K A L KPI +++K +WQH++ + Sbjct: 78 NAL----LLKDIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVFSK 130
>CHEY_SHIFL (P0AE69) Chemotaxis protein cheY| Length = 128 Score = 46.2 bits (108), Expect = 9e-05 Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 1/118 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 512 V++ R +VR LL + G+ V AE+G+DA L+ V+++ MP + G+ L Sbjct: 10 VDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQ--AGGYGFVISDWNMPNMDGLEL 67 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 L I + +PV+M++ + GA ++VKP L+ I+ + Sbjct: 68 LKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>CHEY_ECOLI (P0AE67) Chemotaxis protein cheY| Length = 128 Score = 46.2 bits (108), Expect = 9e-05 Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 1/118 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 512 V++ R +VR LL + G+ V AE+G+DA L+ V+++ MP + G+ L Sbjct: 10 VDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQ--AGGYGFVISDWNMPNMDGLEL 67 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 L I + +PV+M++ + GA ++VKP L+ I+ + Sbjct: 68 LKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>CHEY_ECO57 (P0AE68) Chemotaxis protein cheY| Length = 128 Score = 46.2 bits (108), Expect = 9e-05 Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 1/118 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 512 V++ R +VR LL + G+ V AE+G+DA L+ V+++ MP + G+ L Sbjct: 10 VDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQ--AGGYGFVISDWNMPNMDGLEL 67 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 L I + +PV+M++ + GA ++VKP L+ I+ + Sbjct: 68 LKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125
>CUSR_ECOLI (P0ACZ8) Transcriptional regulatory protein cusR| Length = 227 Score = 46.2 bits (108), Expect = 9e-05 Identities = 31/117 (26%), Positives = 62/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ T + L + G+ V A+NGL+ + + DL++ ++ +P ++G ++ Sbjct: 6 VEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLA--MTGDYDLIILDIMLPDVNGWDIV 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S + KG+P+++++ ++ K L GA D+LVKP EL + + RR Sbjct: 64 RMLRSAN--KGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118
>CUSR_ECOL6 (P0ACZ9) Transcriptional regulatory protein cusR| Length = 227 Score = 46.2 bits (108), Expect = 9e-05 Identities = 31/117 (26%), Positives = 62/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ T + L + G+ V A+NGL+ + + DL++ ++ +P ++G ++ Sbjct: 6 VEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLA--MTGDYDLIILDIMLPDVNGWDIV 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S + KG+P+++++ ++ K L GA D+LVKP EL + + RR Sbjct: 64 RMLRSAN--KGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118
>CUSR_ECO57 (P0AD00) Transcriptional regulatory protein cusR| Length = 227 Score = 46.2 bits (108), Expect = 9e-05 Identities = 31/117 (26%), Positives = 62/117 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ T + L + G+ V A+NGL+ + + DL++ ++ +P ++G ++ Sbjct: 6 VEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLA--MTGDYDLIILDIMLPDVNGWDIV 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S + KG+P+++++ ++ K L GA D+LVKP EL + + RR Sbjct: 64 RMLRSAN--KGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR 118
>NTRC_SALTY (P41789) Nitrogen regulation protein NR(I)| Length = 469 Score = 45.8 bits (107), Expect = 1e-04 Identities = 30/110 (27%), Positives = 51/110 (46%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D R V+ L G + ENG + L D++L+++ MP + G+ LL Sbjct: 9 VDDDSSIRWVLERALAGAGLTCTTFENGNEVLAAL--ASKTPDVLLSDIRMPGMDGLALL 66 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 +I +PVI+M+ + + +GA D+L KP +E L Sbjct: 67 KQIKQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVAL 114
>LUXQ_VIBPA (Q87GU5) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)| (EC 3.1.3.-) Length = 858 Score = 45.4 bits (106), Expect = 2e-04 Identities = 30/107 (28%), Positives = 57/107 (53%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ +++A K +V A++GL+A ++L+D + DL+L + +P L GI Sbjct: 739 VEDNHTNAFILKAFCTKYKMQVDWAKDGLEAMEFLKD--HSYDLILMDNQLPHLGGIETT 796 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 +I + + G P+ + + + T + GA L+KPI++N L Sbjct: 797 KEIRQN-LKLGTPIYACTADTAQETSDAFMEAGANYVLLKPIKENAL 842
>CHEY_THEMA (Q56312) Chemotaxis protein cheY| Length = 120 Score = 45.4 bits (106), Expect = 2e-04 Identities = 28/101 (27%), Positives = 55/101 (54%), Gaps = 1/101 (0%) Frame = -2 Query: 667 RHVVRALLXKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSH 491 R +++ ++ K GYEV A NG +A + ++++ D+V ++ MP ++GI + +I Sbjct: 15 RMMLKDIITKAGYEVAGEATNGREAVEKYKELKP--DIVTMDITMPEMNGIDAIKEIMK- 71 Query: 490 SICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 I +I+ S + V + + GA DF+VKP + + + Sbjct: 72 -IDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRV 111
>PILR_PSEAE (Q00934) Type 4 fimbriae expression regulatory protein pilR| Length = 445 Score = 45.4 bits (106), Expect = 2e-04 Identities = 32/110 (29%), Positives = 53/110 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++ R ++ L + + SA N +A + L + DL LT++ +P SG+ L+ Sbjct: 9 VDDEPDIRELLEITLGRMKLDTRSARNVKEARELL--AREPFDLCLTDMRLPDGSGLDLV 66 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 I PV M++ S+ T + L GA DFL KP+ L+ L Sbjct: 67 QYIQQRH--PQTPVAMITAYGSLDTAIQALKAGAFDFLTKPVDLGRLREL 114
>MALR_BACSU (O05251) Transcriptional regulatory protein malR (Malate response| regulator) Length = 235 Score = 45.4 bits (106), Expect = 2e-04 Identities = 22/71 (30%), Positives = 43/71 (60%) Frame = -2 Query: 574 QNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFL 395 ++ IDL+L ++ MP +G+ LL+++ + + + + VI++S + + K L GAVD+L Sbjct: 45 EHHIDLILLDIYMPGKNGLELLTELRAQN--EAVDVIVISAASELDVIKKTLRYGAVDYL 102 Query: 394 VKPIRKNELKT 362 +KP +T Sbjct: 103 IKPFEFERFQT 113
>CHEY_PSEAE (Q51455) Chemotaxis protein cheY| Length = 124 Score = 45.1 bits (105), Expect = 2e-04 Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 1/118 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGY-EVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 512 V++ R +++ LL G+ A++G A L D ++T+ MP ++GI L Sbjct: 6 VDDFSTMRRIIKNLLRDLGFTNTAEADDGTTALPMLHS--GNFDFLVTDWNMPGMTGIDL 63 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 L + + K +PV+M++ + + G ++VKP LK + I+ R Sbjct: 64 LRAVRADERLKHLPVLMVTAEAKRDQIIEAAQAGVNGYVVKPFTAQVLKEKIEKIFER 121
>RPFG_XANC8 (Q4UU85) Response regulator rpfG| Length = 378 Score = 45.1 bits (105), Expect = 2e-04 Identities = 30/101 (29%), Positives = 50/101 (49%) Frame = -2 Query: 667 RHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHS 488 RHV+ + + +V + LDA + E R+DL+L + MP + G+ ++ Sbjct: 44 RHVIEDIAPEL--KVYDFGDPLDALSWCE--AGRVDLLLLDYRMPGMDGLEFARRLRRLP 99 Query: 487 ICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 + IP+I+++ L G +DFLVKPIR EL+ Sbjct: 100 SHRDIPIILITIVGDEPIRQAALEAGVIDFLVKPIRPRELR 140
>CITT_BACHD (Q9RC52) Transcriptional regulatory protein citT| Length = 230 Score = 45.1 bits (105), Expect = 2e-04 Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 1/89 (1%) Frame = -2 Query: 631 YEVISA-ENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMS 455 + VIS G +A YL + +DL+L +V +P + G+ LL I + + ++M++ Sbjct: 30 FHVISTCRTGGEALDYLSEKAAALDLILLDVYIPDVKGLELLWAIREKF--RDVDIMMVT 87 Query: 454 KNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 + TV + L G +D+L+KP++K L Sbjct: 88 AAKEVDTVQEALRGGIIDYLLKPVQKEVL 116
>YYCF_BACSU (P37478) Transcriptional regulatory protein yycF| Length = 235 Score = 44.7 bits (104), Expect = 3e-04 Identities = 30/107 (28%), Positives = 55/107 (51%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++ ++ L K GYEV A +G +A + +E++Q DL+L ++ +P G+ + Sbjct: 8 VDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQP--DLILLDIMLPNKDGVEVC 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 ++ +P+IM++ DS L GA D++ KP EL Sbjct: 66 REVRKKY---DMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTREL 109
>LUXO1_VIBCH (Q9KT84) Regulatory protein luxO| Length = 455 Score = 44.7 bits (104), Expect = 3e-04 Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 1/109 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRI-DLVLTEVAMPCLSGIGL 512 VE+ + R+ L ++ G DA +E + R DL+L ++ +P ++G+ + Sbjct: 2 VEDTASVAALYRSYLTPLDIDINIVGTGRDA---IESIGRREPDLILLDLRLPDMTGMDV 58 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 L + S +P++ M+ + S+ T + + GA DFL+KP + L+ Sbjct: 59 LYAVKEKS--PDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLR 105
>CHEY_TREPA (P96126) Chemotaxis protein cheY| Length = 144 Score = 44.7 bits (104), Expect = 3e-04 Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Frame = -2 Query: 649 LLXKCGYEVI-SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGI 473 +L GYEV +A +G+D + + + +DLV ++ MP + GI L KI K Sbjct: 43 ILTSEGYEVADTAVDGVDGVEKYKAMSPGVDLVTMDITMPKMDGITALEKILEFD--KNA 100 Query: 472 PVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 V+++S V K L GA +++VKP+ + ++ Sbjct: 101 KVVIISALGKEELVKKALLLGAKNYIVKPLDRKKV 135
>CYAB_STIAU (P40138) Adenylate cyclase 2 (EC 4.6.1.1) (ATP pyrophosphate-lyase| 2) (Adenylyl cyclase 2) (AC2) Length = 352 Score = 44.7 bits (104), Expect = 3e-04 Identities = 31/99 (31%), Positives = 54/99 (54%) Frame = -2 Query: 634 GYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMS 455 GYEV+ ++ +A + + VQ I VL+++ MP + G+ L ++ S + +PVI+++ Sbjct: 31 GYEVMCFQDPYEALEQVGKVQPAI--VLSDLDMPGIDGLELCWRL-KESPSRQVPVIILT 87 Query: 454 KNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 NDS + K L GA D++ K EL + + RR Sbjct: 88 ANDSEAERVKGLRAGADDYVNKSASMAELSARIESVMRR 126
>CHEY_ENTCL (Q9FAD7) Chemotaxis protein cheY| Length = 128 Score = 44.7 bits (104), Expect = 3e-04 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 1/102 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYE-VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 512 V++ R +VR LL + G+ V AE+G+DA L+ V+++ MP + G+ L Sbjct: 10 VDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQ--AGGFGFVISDWNMPNMDGLEL 67 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 386 L I + + +PV+M++ + GA ++VKP Sbjct: 68 LKTIRADAGMASMPVLMVTAEAKKENIIAAAQAGASGYVVKP 109
>SKN7_YEAST (P38889) Transcription factor SKN7 (Peroxide sensitivity protein| POS9) Length = 622 Score = 44.3 bits (103), Expect = 4e-04 Identities = 34/110 (30%), Positives = 50/110 (45%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE+D + + L K G V +GL A LE + R DLVL ++ MP L G Sbjct: 382 VEDDAVSIQLCSKFLRKYGCTVQVVSDGLSAISTLE--KYRYDLVLMDIVMPNLDGATAT 439 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 S + S P+I M+ N + L G D L KP +++L ++ Sbjct: 440 SIVRSFD--NETPIIAMTGNIMNQDLITYLQHGMNDILAKPFTRDDLHSI 487
>REGX3_MYCSM (Q9F868) Sensory transduction protein regX3| Length = 228 Score = 44.3 bits (103), Expect = 4e-04 Identities = 33/117 (28%), Positives = 57/117 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE+++ + LL K G+E +G A E ++ D+VL ++ +P +SG + Sbjct: 7 VEDEESLADPLAFLLRKEGFEATVVGDGPSALAEFE--RSGADIVLLDLMLPGMSGTDVC 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 ++ + S +PVIM++ DS L GA D++ KP EL + + RR Sbjct: 65 KQLRARS---SVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR 118
>SPHR_SYNP7 (P39663) Alkaline phosphatase synthesis transcriptional regulatory| protein sphR Length = 257 Score = 44.3 bits (103), Expect = 4e-04 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 7/124 (5%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLED-------VQNRIDLVLTEVAMPC 530 VE++ R +V +L + G+ V A +G A Y V DLV+ ++ +P Sbjct: 29 VEDEAVIRDMVALVLQQEGFTVDVAADGRTALNYFRSDSPEAGSVTENPDLVVLDLMLPA 88 Query: 529 LSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQH 350 ++G+ + + +P++M+S D+ + L GA D+L KP EL + Sbjct: 89 VNGLDFCRLLRRQGVT--VPILMLSAKDTETDRVVGLEIGADDYLTKPFGTRELVARCRA 146 Query: 349 IWRR 338 + RR Sbjct: 147 LLRR 150
>NTRC_KLEPN (P03029) Nitrogen assimilation regulatory protein| Length = 469 Score = 44.3 bits (103), Expect = 4e-04 Identities = 29/110 (26%), Positives = 51/110 (46%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D R V+ L G + E+G + L D++L+++ MP + G+ LL Sbjct: 9 VDDDSSIRWVLERALTGAGLSCTTFESGNEVLDAL--TTKTPDVLLSDIRMPGMDGLALL 66 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 +I +PVI+M+ + + +GA D+L KP +E L Sbjct: 67 KQIKQRHPM--LPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVAL 114
>NTRC_RHOCA (P09432) Nitrogen regulation protein ntrC| Length = 457 Score = 44.3 bits (103), Expect = 4e-04 Identities = 30/102 (29%), Positives = 57/102 (55%), Gaps = 1/102 (0%) Frame = -2 Query: 688 VENDDCT-RHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 512 V +DD T R V+ L + G +V + + + +++E+ + DLV+++V MP +G+ Sbjct: 7 VADDDRTIRTVLTQALTRAGCKVHATASLMTLMRWVEEGKG--DLVISDVVMPDGNGLEA 64 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 386 L++I G+PVI++S +++ T + A D+L KP Sbjct: 65 LARIARER--PGLPVIVISAQNTIMTAIQAAEADAYDYLPKP 104
>PHOB_KLEPN (P45605) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 44.3 bits (103), Expect = 4e-04 Identities = 30/117 (25%), Positives = 57/117 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ R +V +L + G++ + AE+ A L + DL+L + +P SG+ + Sbjct: 8 VEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWP--DLILLDWMLPGGSGLQFI 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + ++ + IPV+M++ + L GA D++ KP EL + + RR Sbjct: 66 KLLKREAMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRR 122
>PLED_CAUCR (Q9A5I5) Response regulator pleD (Stalked cell| differentiation-controlling protein) [Includes: Diguanylate cyclase (EC 4.6.1.-) (DGC)] Length = 454 Score = 43.9 bits (102), Expect = 5e-04 Identities = 29/102 (28%), Positives = 50/102 (49%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++ + ++ A L YEV +A +G A ++ D++L +V MP + G + Sbjct: 8 VDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMA--ARDLPDIILLDVMMPGMDGFTVC 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPI 383 K+ + IPV++++ D + L GA DFL KPI Sbjct: 66 RKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPI 107 Score = 34.7 bits (78), Expect = 0.28 Identities = 19/66 (28%), Positives = 29/66 (43%) Frame = -2 Query: 565 IDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 386 +DLV+ A G+ + + S + +PV+ M D + K L G D L +P Sbjct: 196 VDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRP 255 Query: 385 IRKNEL 368 I EL Sbjct: 256 IDPQEL 261
>SLN1_YEAST (P39928) Osmolarity two-component system protein SLN1 (EC 2.7.13.3)| Length = 1220 Score = 43.9 bits (102), Expect = 5e-04 Identities = 29/114 (25%), Positives = 63/114 (55%), Gaps = 4/114 (3%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVIS-AENGLDAWQYLEDVQNR---IDLVLTEVAMPCLSG 521 VE++ + V++ +L G E I A +G +A+ ++++ ++ +++ +V MP + G Sbjct: 1093 VEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDG 1152 Query: 520 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 + L +K+ + P++ ++ S + +CL G FL KPI++ +LKT+ Sbjct: 1153 L-LSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTI 1205
>VANR_ENTFA (Q47744) Regulatory protein vanRB| Length = 220 Score = 43.9 bits (102), Expect = 5e-04 Identities = 30/117 (25%), Positives = 57/117 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE+DD + VRA L + YEV + +G +A + + +N LV+ ++ +P ++G LL Sbjct: 8 VEDDDHICNTVRAFLAEARYEVDACTDGNEA--HTKFYENTYQLVILDIMLPGMNGHELL 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + + + P++MM+ + A D++ KP + L + + RR Sbjct: 66 REFRAQN---DTPILMMTALSDDENQIRAFDAEADDYVTKPFKMRILLKRVEALLRR 119
>MTRA_MYCTU (P0A5Z4) DNA-binding response regulator mtrA| Length = 225 Score = 43.5 bits (101), Expect = 6e-04 Identities = 27/107 (25%), Positives = 55/107 (51%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D ++ +L G++ +G A + ++ R DLVL ++ +P ++GI + Sbjct: 8 VDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVREL--RPDLVLLDLMLPGMNGIDVC 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 + + S G+P++M++ V L GA D+++KP + EL Sbjct: 66 RVLRADS---GVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKEL 109
>MTRA_MYCPA (Q93CB8) DNA-binding response regulator mtrA| Length = 225 Score = 43.5 bits (101), Expect = 6e-04 Identities = 27/107 (25%), Positives = 55/107 (51%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D ++ +L G++ +G A + ++ R DLVL ++ +P ++GI + Sbjct: 8 VDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVREL--RPDLVLLDLMLPGMNGIDVC 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 + + S G+P++M++ V L GA D+++KP + EL Sbjct: 66 RVLRADS---GVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKEL 109
>MTRA_MYCLE (Q9CCJ2) DNA-binding response regulator mtrA| Length = 225 Score = 43.5 bits (101), Expect = 6e-04 Identities = 27/107 (25%), Positives = 55/107 (51%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D ++ +L G++ +G A + ++ R DLVL ++ +P ++GI + Sbjct: 8 VDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVREL--RPDLVLLDLMLPGMNGIDVC 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 + + S G+P++M++ V L GA D+++KP + EL Sbjct: 66 RVLRADS---GVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKEL 109
>MTRA_MYCBO (P0A5Z5) DNA-binding response regulator mtrA| Length = 225 Score = 43.5 bits (101), Expect = 6e-04 Identities = 27/107 (25%), Positives = 55/107 (51%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D ++ +L G++ +G A + ++ R DLVL ++ +P ++GI + Sbjct: 8 VDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVREL--RPDLVLLDLMLPGMNGIDVC 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 + + S G+P++M++ V L GA D+++KP + EL Sbjct: 66 RVLRADS---GVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKEL 109
>RPFC_XANCP (P0C0F6) Sensory/regulatory protein rpfC (EC 2.7.13.3)| Length = 677 Score = 43.5 bits (101), Expect = 6e-04 Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 5/106 (4%) Frame = -2 Query: 685 ENDDCTRHVVRALLXKCGYEVI---SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIG 515 ++ + R V++ LL K G++V+ AE LDA + D V+ ++ MP ++G+ Sbjct: 419 DDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAM-----AEEDYDAVIVDLHMPGMNGLD 473 Query: 514 LLS--KITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPI 383 +L ++ S + PV+++S + + + C GA FL KP+ Sbjct: 474 MLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 519
>RPFC_XANC8 (P0C0F7) Sensory/regulatory protein rpfC (EC 2.7.13.3)| Length = 677 Score = 43.5 bits (101), Expect = 6e-04 Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 5/106 (4%) Frame = -2 Query: 685 ENDDCTRHVVRALLXKCGYEVI---SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIG 515 ++ + R V++ LL K G++V+ AE LDA + D V+ ++ MP ++G+ Sbjct: 419 DDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAM-----AEEDYDAVIVDLHMPGMNGLD 473 Query: 514 LLS--KITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPI 383 +L ++ S + PV+++S + + + C GA FL KP+ Sbjct: 474 MLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPV 519
>YEDW_ECOLI (P76340) Probable transcriptional regulatory protein yedW| Length = 223 Score = 43.5 bits (101), Expect = 6e-04 Identities = 30/107 (28%), Positives = 56/107 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 +E++ T+ V L + GY + + +G D YL +++ L++ ++ +P + G +L Sbjct: 6 IEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGL-YLA-LKDDYALIILDIMLPGMDGWQIL 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 + + K PVI ++ DS+ + L GA D+LVKP +EL Sbjct: 64 QTLRT---AKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSEL 107
>RESD_BACSU (P35163) Transcriptional regulatory protein resD| Length = 240 Score = 43.5 bits (101), Expect = 6e-04 Identities = 30/117 (25%), Positives = 56/117 (47%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++ R ++R L + Y + AENG +A + ++ DL+L ++ MP GI + Sbjct: 12 VDDEARIRRLLRMYLERENYAIDEAENGDEA--IAKGLEANYDLILLDLMMPGTDGIEVC 69 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +I K P+IM++ + + G D++VKP E+ + + RR Sbjct: 70 RQIREK---KATPIIMLTAKGEEANRVQGFEAGTDDYIVKPFSPREVVLRVKALLRR 123
>PHOB_RHIME (Q52990) Phosphate regulon transcriptional regulatory protein phoB| Length = 227 Score = 43.5 bits (101), Expect = 6e-04 Identities = 32/117 (27%), Positives = 60/117 (51%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE+++ ++R L G+EV + G +A L++ DL++ + +P +SGI L Sbjct: 8 VEDEEALSVLLRYNLEAEGFEVDTILRGDEAEIRLQE--RLPDLLILDWMLPGVSGIELC 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 ++ + +P+IM++ S + L+ GA D++VKP EL + + RR Sbjct: 66 RRLRQRPETERLPIIMLTARGEESERVRGLATGADDYVVKPFSTPELMARVKAMLRR 122
>PRRA_MYCLE (Q50136) Transcriptional regulatory protein prrA| Length = 233 Score = 43.1 bits (100), Expect = 8e-04 Identities = 28/99 (28%), Positives = 52/99 (52%) Frame = -2 Query: 634 GYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMS 455 G+EV +A +G +A + + R D ++ ++ MP L G+ +++ + ++ +PV ++S Sbjct: 31 GFEVSTAIDGAEALR--NATETRPDAIVLDINMPVLDGVSVVTAL--RAMDNDVPVCVLS 86 Query: 454 KNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 S+ L GA D+LVKP EL + + RR Sbjct: 87 ARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRR 125
>COPR_PSESM (Q02540) Transcriptional activator protein copR| Length = 227 Score = 42.7 bits (99), Expect = 0.001 Identities = 29/103 (28%), Positives = 51/103 (49%) Frame = -2 Query: 646 LXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPV 467 L + G+ V G DA + + DL++ +V MP L G ++ ++ + + +PV Sbjct: 20 LREAGFNVDRVVTGTDAVD--QALNEAYDLLILDVMMPGLDGWEVIRRLRTAG--QPVPV 75 Query: 466 IMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + ++ D + K L GA D+LVKP +EL + + RR Sbjct: 76 LFLTARDGVDDRVKGLELGADDYLVKPFALSELLARVRTLLRR 118
>CHEB1_LEPIN (Q8F6P9) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 357 Score = 42.7 bits (99), Expect = 0.001 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Frame = -2 Query: 625 VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMS--K 452 V + + G+D + + D+++ +V MP + G+ L ++ + GIPVIM+S Sbjct: 34 VATGKTGMDCIDLAQKMNP--DVIILDVEMPVMDGLTALHELQKKKL--GIPVIMLSVLT 89 Query: 451 NDSMSTVFKCLSKGAVDFLVKP 386 + FK L GA+DF+ KP Sbjct: 90 QNGAEATFKALEYGAIDFVPKP 111
>CHEB1_LEPIC (P62641) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 357 Score = 42.7 bits (99), Expect = 0.001 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Frame = -2 Query: 625 VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMS--K 452 V + + G+D + + D+++ +V MP + G+ L ++ + GIPVIM+S Sbjct: 34 VATGKTGMDCIDLAQKMNP--DVIILDVEMPVMDGLTALHELQKKKL--GIPVIMLSVLT 89 Query: 451 NDSMSTVFKCLSKGAVDFLVKP 386 + FK L GA+DF+ KP Sbjct: 90 QNGAEATFKALEYGAIDFVPKP 111
>FIXJ_BRAJA (P23221) Transcriptional regulatory protein fixJ| Length = 205 Score = 42.7 bits (99), Expect = 0.001 Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 1/111 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQN-RIDLVLTEVAMPCLSGIGL 512 +++D R + LL G+ V + DA +L+ + V+++V MP L GI L Sbjct: 10 IDDDAAMRDSLNFLLDSAGFGVTLFD---DAQAFLDALPGLSFGCVVSDVRMPGLDGIEL 66 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 L ++ + P+++M+ + + + + GAVDFL KP + L + Sbjct: 67 LKRMKAQQ--SPFPILIMTGHGDVPLAVEAMKLGAVDFLEKPFEDDRLTAM 115
>LUXQ_VIBHA (P54302) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)| (EC 3.1.3.-) Length = 859 Score = 42.7 bits (99), Expect = 0.001 Identities = 30/107 (28%), Positives = 55/107 (51%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ +++A K +V A++GLDA + L D DL+L + +P L GI Sbjct: 740 VEDNHTNAFILQAFCKKYKMQVDWAKDGLDAMELLSDTT--YDLILMDNQLPHLGGIETT 797 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 +I + + G P+ + + + T ++ GA ++KPI++N L Sbjct: 798 HEIRQN-LRLGTPIYACTADTAKETSDAFMAAGANYVMLKPIKENAL 843
>KDPE_ECOLI (P21866) KDP operon transcriptional regulatory protein kdpE| Length = 225 Score = 42.4 bits (98), Expect = 0.001 Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 3/120 (2%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAEN---GLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 518 VE++ R +R L G V AE GL LE + DL++ ++ +P GI Sbjct: 7 VEDEQAIRRFLRTALEGDGMRVFEAETLQRGL-----LEAATRKPDLIILDLGLPDGDGI 61 Query: 517 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + + S +PVI++S S L GA D+L KP EL+ + RR Sbjct: 62 EFIRDLRQWS---AVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRR 118
>NODW_BRAJA (P15940) Nodulation protein W| Length = 227 Score = 42.4 bits (98), Expect = 0.001 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 1/108 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQY-LEDVQNRIDLVLTEVAMPCLSGIGL 512 VE+D R + L G EV++ + + Q + DV + + L +V +P LSG+ Sbjct: 25 VEDDISMRRSLTNLFRSVGLEVVAFGSAREMLQSTMPDVTSCLVL---DVRLPGLSGLDY 81 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 +++ +I IP+I ++ + + + + GAVDFL KP R EL Sbjct: 82 QTELARLNI--HIPIIFITGHGDIPMTVRAMKGGAVDFLSKPFRDQEL 127
>NTRC_PROVU (P28787) Nitrogen regulation protein NR(I)| Length = 473 Score = 42.0 bits (97), Expect = 0.002 Identities = 29/110 (26%), Positives = 52/110 (47%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D R V+ + + G + E+ D + L Q D++L+++ MP + G+ LL Sbjct: 9 VDDDSSIRWVLERAITREGMLCRAFEHANDVLKALNSEQP--DVLLSDIRMPDMDGLSLL 66 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 I +PVI+M+ + + +GA D+L KP +E L Sbjct: 67 KIIKEQY--PTLPVIIMTAHSDLDAAVNAYQQGAFDYLPKPFDIDETLAL 114
>YKOG_BACSU (O34903) Hypothetical sensory transduction protein ykoG| Length = 228 Score = 42.0 bits (97), Expect = 0.002 Identities = 31/107 (28%), Positives = 50/107 (46%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE+++ V++ L GY V NG + + LVL +V +P LSG+ +L Sbjct: 9 VEDEEKIARVLQLELEYEGYSVTIKHNGTEGLDAA--AEGGYSLVLLDVMLPGLSGLEVL 66 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 ++ PVI+++ DS+ L GA D++ KP EL Sbjct: 67 RRLRKTD--SQTPVILLTARDSIPDKVTGLDIGANDYVTKPFEIEEL 111
>Y2151_LEPIN (P24086) Hypothetical protein LA_2151 (ORF 2)| Length = 135 Score = 42.0 bits (97), Expect = 0.002 Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 1/107 (0%) Frame = -2 Query: 685 ENDDCTRHVVRALLXKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 EN + +L GY+VI AENG + + L D +DL+ ++ +P + G Sbjct: 18 ENSRFQAKQLAQILESEGYQVIGFAENGKELVK-LYDEHRLVDLITLDLNLPVMDGYATF 76 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 +I + I +++S+ ++ + + + +GA+D++ KPI++ ++ Sbjct: 77 FEIKGKGVLPRI--VIVSEENTPAVLKNLIDEGAMDYIPKPIKREKI 121
>Y1769_LEPIC (Q72RH6) Hypothetical protein LIC_11769| Length = 135 Score = 42.0 bits (97), Expect = 0.002 Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 1/107 (0%) Frame = -2 Query: 685 ENDDCTRHVVRALLXKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 EN + +L GY+VI AENG + + L D +DL+ ++ +P + G Sbjct: 18 ENSRFQAKQLAQILESEGYQVIGFAENGKELVK-LYDEHRLVDLITLDLNLPVMDGYATF 76 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 +I + I +++S+ ++ + + + +GA+D++ KPI++ ++ Sbjct: 77 FEIKGKGVLPRI--VIVSEENTPAVLKNLIDEGAMDYIPKPIKREKI 121
>CZCR_RALME (Q44006) Transcriptional activator protein czcR| Length = 225 Score = 42.0 bits (97), Expect = 0.002 Identities = 30/107 (28%), Positives = 52/107 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ T ++ L + G+ V A NG D E+ D+++ +V +P + G ++ Sbjct: 6 VEDEPRTAEYLQKGLSESGFVVDIANNGGDGLHMAEETD--YDVIILDVMLPGMDGWTVI 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 I S S PV+ ++ D ++ + GA D+LVKP EL Sbjct: 64 KSIRSKS---ETPVLFLTALDDVADRVRGFELGADDYLVKPFAFAEL 107
>PATA_ANASP (P39048) Protein patA (PAT-1)| Length = 379 Score = 41.6 bits (96), Expect = 0.002 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 1/96 (1%) Frame = -2 Query: 631 YEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK 452 + VI + L A +E + + D++L V MP L G L S + HS K PVIM+++ Sbjct: 285 FAVIGVTDSLKA--LMEILCTKPDIILINVDMPDLDGYELCSLLRKHSYFKNTPVIMVTE 342 Query: 451 NDSMSTVFKCLSKGAVDFLVKPIRKNE-LKTLWQHI 347 + + A L KP + + LK +++HI Sbjct: 343 KAGLVDRARAKIVRASGHLTKPFNQGDLLKVIFKHI 378
>CHEB_THETN (Q8RAZ3) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 367 Score = 41.6 bits (96), Expect = 0.002 Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 8/97 (8%) Frame = -2 Query: 652 ALLXKCGYEVISAENGLDAWQYLED--------VQNRIDLVLTEVAMPCLSGIGLLSKIT 497 A + +C +++ E ++ D V+ R D++ ++ MP + G+ L I Sbjct: 14 AFMRRCLKDILENEEDMEVIDTARDGNEAVKKAVELRPDVITLDINMPVMDGLTALQYIM 73 Query: 496 SHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 386 S + C + + +S +++T F+ L GAVDF+ KP Sbjct: 74 SLAPCPVVIISSLSTEGALTT-FEALELGAVDFVAKP 109
>CHEB_BACLD (Q65JK6) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 357 Score = 41.6 bits (96), Expect = 0.002 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%) Frame = -2 Query: 619 SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK--ND 446 +A NG +A Q ++++ R D++ ++ MP ++G L +I + +PV+M+S Sbjct: 32 TARNGEEALQKIKEL--RPDVITLDIEMPVMNGKETLKRIMASD---PLPVVMVSSLTQQ 86 Query: 445 SMSTVFKCLSKGAVDFLVKP 386 +CL GA+DF+ KP Sbjct: 87 GADITIECLELGAIDFVAKP 106
>REGX3_MYCTU (Q11156) Sensory transduction protein regX3| Length = 227 Score = 41.6 bits (96), Expect = 0.002 Identities = 32/117 (27%), Positives = 56/117 (47%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE+++ + LL K G+E +G A + + D+VL ++ +P +SG + Sbjct: 7 VEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFD--RAGADIVLLDLMLPGMSGTDVC 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 ++ + S +PVIM++ DS L GA D++ KP EL + + RR Sbjct: 65 KQLRARS---SVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR 118
>REGX3_MYCBO (O07130) Sensory transduction protein regX3| Length = 227 Score = 41.6 bits (96), Expect = 0.002 Identities = 32/117 (27%), Positives = 56/117 (47%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE+++ + LL K G+E +G A + + D+VL ++ +P +SG + Sbjct: 7 VEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFD--RAGADIVLLDLMLPGMSGTDVC 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 ++ + S +PVIM++ DS L GA D++ KP EL + + RR Sbjct: 65 KQLRARS---SVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR 118
>YCLJ_BACSU (P94413) Hypothetical sensory transduction protein yclJ| Length = 227 Score = 41.2 bits (95), Expect = 0.003 Identities = 23/85 (27%), Positives = 43/85 (50%) Frame = -2 Query: 640 KCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIM 461 K G+E +GL+ +Q + DL++ ++ +P + G+ + KI S +P+IM Sbjct: 22 KEGFEAEFVHDGLEGYQRF--TEENWDLIILDIMLPSMDGVTICRKIRETST---VPIIM 76 Query: 460 MSKNDSMSTVFKCLSKGAVDFLVKP 386 ++ D+ S GA D++ KP Sbjct: 77 LTAKDTESDQVIGFEMGADDYVTKP 101
>BCER_BACHD (Q9K621) Sensory transduction protein bceR| Length = 231 Score = 41.2 bits (95), Expect = 0.003 Identities = 30/117 (25%), Positives = 50/117 (42%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 +E+D ++ L + Y+V N + E + DLV+ ++ +P G Sbjct: 7 IEDDHTLFSEIKERLSQWSYDVFGVSNFEKVIE--EFTSLKPDLVIIDIQLPKFDGFHWC 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 I HS +P+I +S D + + + GA DF+ KP + L Q I RR Sbjct: 65 RMIRQHS---NVPIIFLSSRDHPTDMVMSMQLGADDFIQKPFHFDVLVAKIQAILRR 118
>RSSB_SERMA (Q8GP20) Swarming motility regulation protein rssB| Length = 219 Score = 41.2 bits (95), Expect = 0.003 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 5/88 (5%) Frame = -2 Query: 586 LEDVQNRI-----DLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKC 422 + D +N++ DL+L ++ +P G GL I + + IP+I+++ D + ++ Sbjct: 33 IADAENKLSSGGFDLMLLDLTLP--DGDGLQKLIAWRAAGQNIPIIILTARDRIESLVNS 90 Query: 421 LSKGAVDFLVKPIRKNELKTLWQHIWRR 338 L GA DFL KP EL + + + RR Sbjct: 91 LDSGANDFLAKPFALPELISRVKAVNRR 118
>GACS_PSESY (P48027) Sensor protein gacS (EC 2.7.13.3)| Length = 907 Score = 41.2 bits (95), Expect = 0.003 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 3/110 (2%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++ +V+ LL G EV++ E G A ++ Q DLVL +V MP + G Sbjct: 662 VDDNPANLLLVQTLLEDMGAEVVAVEGGYAAVNAVQ--QEAFDLVLMDVQMPGMDGRQAT 719 Query: 508 SKITSHSICKG---IPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 I + + +P++ ++ + + L G D+L KPI + +L Sbjct: 720 EAIRAWEAERNQSSLPIVALTAHAMANEKRSLLQSGMDDYLTKPISERQL 769
>QSEB_HAEIN (P45337) Transcriptional regulatory protein qseB| Length = 221 Score = 41.2 bits (95), Expect = 0.003 Identities = 30/117 (25%), Positives = 57/117 (48%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 +E+D+ + ++ L K G+ V +G L D V+ ++ +P L G+ +L Sbjct: 6 IEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAP--YDAVVLDLTLPKLDGLEVL 63 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + S+ + +PV++++ D++ K L GA D+L KP E+ Q + RR Sbjct: 64 QQWRSNH--QDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRR 118
>SP0F_BACSU (P06628) Sporulation initiation phosphotransferase F (EC 2.7.-.-)| (Stage 0 sporulation protein F) Length = 124 Score = 41.2 bits (95), Expect = 0.003 Identities = 28/101 (27%), Positives = 51/101 (50%) Frame = -2 Query: 667 RHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHS 488 R ++ + K GY+ A NGL A + + R DLVL ++ +P + GI +L ++ Sbjct: 16 RILLNEVFNKEGYQTFQAANGLQALDIV--TKERPDLVLLDMKIPGMDGIEILKRM--KV 71 Query: 487 ICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 I + I VI+M+ + + + GA+ KP +E++ Sbjct: 72 IDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIR 112
>PCOR_ECOLI (Q47456) Transcriptional regulatory protein pcoR| Length = 226 Score = 41.2 bits (95), Expect = 0.003 Identities = 31/117 (26%), Positives = 56/117 (47%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ T ++ L + GY+ NG D + + DL++ +V +P L G ++ Sbjct: 7 VEDEQKTGRYLQQGLVEEGYQADLFNNGRDGLGAAS--KGQYDLIILDVMLPFLDGWQII 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 S + + PV+ ++ D++ K L GA D+L+KP EL + + RR Sbjct: 65 SALRESGHEE--PVLFLTAKDNVRDKVKGLELGADDYLIKPFDFTELVARVRTLLRR 119
>CHEB_ARCFU (O29221) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 349 Score = 41.2 bits (95), Expect = 0.003 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 3/104 (2%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVI-SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGL 512 V++ R V +L K G EV+ +A+NG +A + + ++ + D++ ++ MP + G+ Sbjct: 6 VDDSALVRMAVTDILTKAGIEVVDTAKNGREAVE--KALKLKPDVITLDINMPEMDGLTA 63 Query: 511 LSKITSHSICKGIPVIMMSK--NDSMSTVFKCLSKGAVDFLVKP 386 L I + PV+M+S + + L GAVDF+ KP Sbjct: 64 LKLIMEK---QPTPVVMLSSLTKEGARETLEALKIGAVDFVTKP 104
>CHEB_DESPS (Q6AJV3) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 364 Score = 40.8 bits (94), Expect = 0.004 Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 2/99 (2%) Frame = -2 Query: 667 RHVVRALLXKC-GYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITS 494 R +V LL + G EVI A NG A + ++ DL+ ++ MP ++GI LL + Sbjct: 16 RKIVSDLLREIPGIEVIGVAHNGKIALDKIR--LSKPDLITLDIEMPVMNGIELLEHLKD 73 Query: 493 HSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRK 377 G ++ +D K L GA DF++KP K Sbjct: 74 IPDAPGAVMLSTLTSDGSRMTMKALELGAFDFILKPQEK 112
>DCTR_BACSU (P96602) Probable C4-dicarboxylate response regulator dctR| Length = 226 Score = 40.8 bits (94), Expect = 0.004 Identities = 25/85 (29%), Positives = 45/85 (52%) Frame = -2 Query: 619 SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSM 440 +A NG + + +++ Q DLV+ +V MP GI L +I + + VI++S Sbjct: 36 TAGNGEEGMKLIKEEQP--DLVILDVYMPKKDGIKTLQEIRKQKL--EVDVIVVSAAKDK 91 Query: 439 STVFKCLSKGAVDFLVKPIRKNELK 365 T+ L GAVD+++KP + ++ Sbjct: 92 ETISLMLQNGAVDYILKPFKLERMR 116
>CHEB_CLOAB (Q97GZ3) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 345 Score = 40.8 bits (94), Expect = 0.004 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 3/100 (3%) Frame = -2 Query: 628 EVI-SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK 452 EVI +A NG D L+ ++ D++ ++ MP ++GI L + S I IP+I+ S Sbjct: 30 EVIGTAINGQDLLNKLKVMKP--DVITLDIEMPVMNGIETLKAVKSLKI--DIPIIVFSS 85 Query: 451 --NDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 M +CL GA DF+ KP + EL + + +R Sbjct: 86 ISQKGMKYTMECLYLGAFDFIPKPEKPFELSKMKDDLIKR 125
>TCSA_EMENI (Q9P896) Two-component system protein A (EC 2.7.13.3)| Length = 719 Score = 40.8 bits (94), Expect = 0.004 Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 4/117 (3%) Frame = -2 Query: 679 DDCTRHV--VRALLXKCGYEVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 D+ H V A + G++ I A NG +A + + D++L +V+MP L G+ Sbjct: 566 DNIVNHTRYVEAPTYQFGFQRIDGAWNGAEAVRMVRQKPLSYDIILMDVSMPVLDGLAAT 625 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNE-LKTLWQHIWR 341 +I + +P+I ++ N +++G D + KP+ +++ L+ LW+ R Sbjct: 626 EQIRDMGLT--MPIIAITGNAMKGDAETYIAQGMDDCICKPVHRDQLLRVLWKWFGR 680
>CHEB_TREDE (P62646) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 372 Score = 40.4 bits (93), Expect = 0.005 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Frame = -2 Query: 616 AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK--NDS 443 A NG A Q LE V D+++ ++ MP ++GI L ++ +I IPV+++S + Sbjct: 35 AMNGRFALQKLERVAP--DVIVLDLEMPEMNGIEFLRELKKQNI--KIPVVILSSIAKEG 90 Query: 442 MSTVFKCLSKGAVDFLVKP 386 CL GA DF+ KP Sbjct: 91 AKVTMDCLELGACDFITKP 109
>CHEB_METMP (P62647) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 365 Score = 40.4 bits (93), Expect = 0.005 Identities = 26/83 (31%), Positives = 50/83 (60%), Gaps = 3/83 (3%) Frame = -2 Query: 625 VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMS--- 455 V +A++G +A++ ++ ++ + + +V MP ++GI +I ++ K P++M+S Sbjct: 32 VATAKDGKEAFELVKKLEPNV--ITMDVEMPIMNGIDATKQIMAY---KPTPILMLSAVT 86 Query: 454 KNDSMSTVFKCLSKGAVDFLVKP 386 K S +T+ K L GAVDF+ KP Sbjct: 87 KQGSEATL-KALDNGAVDFIEKP 108
>PGTA_SALTY (P06184) Phosphoglycerate transport system transcriptional| regulatory protein pgtA Length = 415 Score = 40.4 bits (93), Expect = 0.005 Identities = 28/104 (26%), Positives = 53/104 (50%) Frame = -2 Query: 649 LLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIP 470 +L + GY V + +A ++++ I VL++V MP SGI L++ H +P Sbjct: 24 MLEQAGYRVRGFTHPFEAKEWVKADWEGI--VLSDVCMPGCSGIDLMTLF--HQDDDQLP 79 Query: 469 VIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +++++ + + + KGA DFL KP+ +L L + R+ Sbjct: 80 ILLITGHGDVPMAVDAVKKGAWDFLQKPVDPGKLLILIEDALRQ 123
>FIXJ_RHIME (P10958) Transcriptional regulatory protein fixJ| Length = 204 Score = 40.4 bits (93), Expect = 0.005 Identities = 26/101 (25%), Positives = 53/101 (52%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++++ R + +L G+ V ++ + DV+N + ++T++ MP +SG+ LL Sbjct: 9 VDDEEPVRKSLAFMLTMNGFAVKMHQSAEAFLAFAPDVRNGV--LVTDLRMPDMSGVELL 66 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 386 + I IP I+++ + + + + GAVDF+ KP Sbjct: 67 RNLGDLKI--NIPSIVITGHGDVPMAVEAMKAGAVDFIEKP 105
>FIXJ_AZOCA (P26487) Transcriptional regulatory protein fixJ| Length = 211 Score = 40.0 bits (92), Expect = 0.007 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVI---SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGI 518 +++DD R + LL G V SA LDA L+ ++T+V MP +SG+ Sbjct: 10 IDDDDAVRESLAFLLESSGLAVTQHTSAAAFLDAGVPLDR-----GCIVTDVRMPGISGL 64 Query: 517 GLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 386 LL ++ + + VI+M+ + + + + GA DFL KP Sbjct: 65 ELLKELNARGA--HMAVIVMTGHGDVPLAVEAMKLGAADFLEKP 106
>UHPA_SHIFL (P0AGA9) Transcriptional regulatory protein uhpA| Length = 196 Score = 40.0 bits (92), Expect = 0.007 Identities = 23/66 (34%), Positives = 40/66 (60%) Frame = -2 Query: 565 IDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 386 + + + +++MP +SG+ LLS++ KG+ IM+S +DS + V + L+ GA FL K Sbjct: 48 VQVCICDISMPDISGLELLSQLP-----KGMATIMLSVHDSPALVEQALNAGARGFLSKR 102 Query: 385 IRKNEL 368 +EL Sbjct: 103 CSPDEL 108
>UHPA_ECOLI (P0AGA6) Transcriptional regulatory protein uhpA| Length = 196 Score = 40.0 bits (92), Expect = 0.007 Identities = 23/66 (34%), Positives = 40/66 (60%) Frame = -2 Query: 565 IDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 386 + + + +++MP +SG+ LLS++ KG+ IM+S +DS + V + L+ GA FL K Sbjct: 48 VQVCICDISMPDISGLELLSQLP-----KGMATIMLSVHDSPALVEQALNAGARGFLSKR 102 Query: 385 IRKNEL 368 +EL Sbjct: 103 CSPDEL 108
>UHPA_ECOL6 (P0AGA7) Transcriptional regulatory protein uhpA| Length = 196 Score = 40.0 bits (92), Expect = 0.007 Identities = 23/66 (34%), Positives = 40/66 (60%) Frame = -2 Query: 565 IDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 386 + + + +++MP +SG+ LLS++ KG+ IM+S +DS + V + L+ GA FL K Sbjct: 48 VQVCICDISMPDISGLELLSQLP-----KGMATIMLSVHDSPALVEQALNAGARGFLSKR 102 Query: 385 IRKNEL 368 +EL Sbjct: 103 CSPDEL 108
>UHPA_ECO57 (P0AGA8) Transcriptional regulatory protein uhpA| Length = 196 Score = 40.0 bits (92), Expect = 0.007 Identities = 23/66 (34%), Positives = 40/66 (60%) Frame = -2 Query: 565 IDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 386 + + + +++MP +SG+ LLS++ KG+ IM+S +DS + V + L+ GA FL K Sbjct: 48 VQVCICDISMPDISGLELLSQLP-----KGMATIMLSVHDSPALVEQALNAGARGFLSKR 102 Query: 385 IRKNEL 368 +EL Sbjct: 103 CSPDEL 108
>LUXQ_VIBVY (Q7MD16) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)| (EC 3.1.3.-) Length = 857 Score = 39.7 bits (91), Expect = 0.009 Identities = 29/107 (27%), Positives = 54/107 (50%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ +++A K V ++G A + L++ + DL+L + +P + GI Sbjct: 739 VEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKE--HAFDLILMDNQLPKMGGIEAT 796 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 +I ++ G P+ + + ST + LS GA +VKPI++ EL Sbjct: 797 REIRE-TLKLGTPIYACTADAQESTKQEFLSAGANRVIVKPIKEQEL 842
>LUXQ_VIBVU (Q8D5Z6) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)| (EC 3.1.3.-) Length = 857 Score = 39.7 bits (91), Expect = 0.009 Identities = 29/107 (27%), Positives = 54/107 (50%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ +++A K V ++G A + L++ + DL+L + +P + GI Sbjct: 739 VEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKE--HAFDLILMDNQLPKMGGIEAT 796 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 +I ++ G P+ + + ST + LS GA +VKPI++ EL Sbjct: 797 REIRE-TLKLGTPIYACTADAQESTKQEFLSAGANRVIVKPIKEQEL 842
>CHEB3_GEOSL (P62640) Chemotaxis response regulator protein-glutamate| methylesterase of group 3 operon (EC 3.1.1.61) Length = 371 Score = 39.7 bits (91), Expect = 0.009 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%) Frame = -2 Query: 562 DLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPI 383 DLV ++ MP + G LL + +S VI++S VF+ L GAVDF+ KP Sbjct: 51 DLVTLDLEMPRMDGFTLLRIVMEYS---PTAVIVISSRSEDEKVFRALELGAVDFVAKPT 107 Query: 382 R--KNELKTLWQHIWRR 338 + E+ T+ + + R+ Sbjct: 108 KGVSEEILTIREDLHRK 124
>CHEV_BACSU (P37599) Chemotaxis protein cheV| Length = 303 Score = 39.7 bits (91), Expect = 0.009 Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 8/86 (9%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYE-VISAENGLDAWQYL-------EDVQNRIDLVLTEVAMP 533 VE+ +++ L + GY + S ENG +A++Y+ D+ +ID+++T++ MP Sbjct: 180 VEDSPLLMRLLQDELKEAGYNNIASFENGKEAYEYIMNLAENETDLSKQIDMIITDIEMP 239 Query: 532 CLSGIGLLSKITSHSICKGIPVIMMS 455 + G L + + +PV++ S Sbjct: 240 KMDGHRLTKLLKENPKSSDVPVMIFS 265
>PRR1_SCHPO (O14283) Transcription factor prr1 (Pombe response regulator 1)| Length = 539 Score = 39.7 bits (91), Expect = 0.009 Identities = 29/110 (26%), Positives = 48/110 (43%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE+D+ +R + L +V A +G+ A DL+L + +P L G+ + Sbjct: 373 VEDDELSRRMTIKFLTSFDCQVDVAVDGIGAVNKAN--AGGFDLILMDFILPNLDGLSVT 430 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 I + P++ ++ N SM+ + G D LVKP K L L Sbjct: 431 CLIRQYD--HNTPILAITSNISMNDAVTYFNHGVTDLLVKPFTKLTLLQL 478
>BCER_BACSU (O34951) Sensory transduction protein bceR| Length = 231 Score = 39.7 bits (91), Expect = 0.009 Identities = 29/117 (24%), Positives = 51/117 (43%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 +E+D+ H ++ L Y+V ++ Q V D V+ +V +P G Sbjct: 7 IEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNP--DCVIIDVQLPKFDGFHWC 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 I S S +P++ +S D + + + GA DF+ KP + L Q ++RR Sbjct: 65 RLIRSRS---NVPILFLSSRDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRR 118
>YPH5_THIVI (P45365) Hypothetical 76.5 kDa protein in phbC 3'region (ORF5)| Length = 692 Score = 39.3 bits (90), Expect = 0.011 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 1/108 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQN-RIDLVLTEVAMPCLSGIGL 512 +E D + +LL G E + + D + L +Q R +LVL ++ +P +G L Sbjct: 143 LEQDASHAKKIASLLATIGMETLVVD---DPMKILARMQAFRPNLVLMDLYLPGATGSEL 199 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 + I H GIP++ +S+ + L G F+ KP+ + L Sbjct: 200 TTIIRDHDDFYGIPILFLSQEADLDKQLAALKAGGDGFIKKPVSREAL 247
>DCTD_RHIME (P13632) C4-dicarboxylate transport transcriptional regulatory| protein dctD Length = 460 Score = 39.3 bits (90), Expect = 0.011 Identities = 24/107 (22%), Positives = 53/107 (49%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 +++D R ++ L G+ V S + +A L + +V++++ MP + G+ L Sbjct: 10 IDDDRDLRKAMQQTLELAGFTVSSFASATEALAGLS--ADFAGIVISDIRMPGMDGLALF 67 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 KI + + +P+I+++ + + + + GA DF+ KP + L Sbjct: 68 RKILA--LDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRL 112
>TCSB_EMENI (Q9P4U6) Two-component system protein B precursor (EC 2.7.13.3) (NHK1| protein) (SLN1 homolog) Length = 1070 Score = 38.9 bits (89), Expect = 0.015 Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 3/102 (2%) Frame = -2 Query: 661 VVRALLXKCGYEVISAENGLDAWQYLEDVQNR---IDLVLTEVAMPCLSGIGLLSKITSH 491 V+R L + Y+V ++G +A+ ++ DL+ ++ MP L GI +++ Sbjct: 948 VLRMLALEDVYDVTVVKDGQEAYDTVKANMEEGKVFDLIFMDIQMPNLDGIES-TRLIRQ 1006 Query: 490 SICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK 365 C P++ +S S + C++ G F+ KPIR+ LK Sbjct: 1007 MGCSA-PIVALSAFSEDSNIKDCMNSGMDMFISKPIRRPALK 1047
>CHEB_SYMTH (Q67P67) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 362 Score = 38.9 bits (89), Expect = 0.015 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 2/80 (2%) Frame = -2 Query: 619 SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKN--D 446 +A +G D + + +Q D+V ++ MP L G G L +I + + PV+M+S + + Sbjct: 39 TARDGQDGLEKVLQLQP--DVVTLDIEMPRLDGYGTLREIMAR---RPTPVVMVSSHTRE 93 Query: 445 SMSTVFKCLSKGAVDFLVKP 386 + L+ GAVDF+ KP Sbjct: 94 GAEATIRALALGAVDFVAKP 113
>DCTR_BACHD (Q9K998) Probable C4-dicarboxylate response regulator dctR| Length = 230 Score = 38.5 bits (88), Expect = 0.020 Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 8/125 (6%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKC-GYEVI----SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 524 +E+D + V R + K G+ ++ + E G+ + L+ DL+L ++ MP Sbjct: 12 IEDDPMVQEVNRMFVEKLSGFTIVGTTATGEEGMVKTRELQP-----DLILLDIFMPKQD 66 Query: 523 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELK---TLWQ 353 G+ + +I I + +I ++ + T+ L G +D+LVKP LK T ++ Sbjct: 67 GLSFIKQIREQYI--DVDIIAVTAANDTKTIKTLLRYGVMDYLVKPFTFERLKAALTQYE 124 Query: 352 HIWRR 338 ++R+ Sbjct: 125 EMFRK 129
>PFER_PSEAE (Q04803) Transcriptional activator protein pfeR| Length = 305 Score = 38.5 bits (88), Expect = 0.020 Identities = 31/117 (26%), Positives = 51/117 (43%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE+D R + A + G+ V +G + + DLVL ++ +P L G+ LL Sbjct: 83 VEDDPRLREDLDAHFRRRGFRVTVCGDGSHGLEAAG--REAFDLVLLDIMLPGLDGLALL 140 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + + PV++MS + ++GA D+L KP EL + RR Sbjct: 141 ESLRRE---QATPVMLMSALGAEQDRISGFTRGADDYLPKPFSLAELDARTDALLRR 194
>UHPA_SALTY (P27667) Transcriptional regulatory protein uhpA| Length = 196 Score = 38.5 bits (88), Expect = 0.020 Identities = 22/66 (33%), Positives = 40/66 (60%) Frame = -2 Query: 565 IDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 386 + + + +++MP +SG+ LLS++ KG+ I++S +DS + V + L+ GA FL K Sbjct: 48 VQVCICDISMPDISGLELLSQLP-----KGMATIVLSVHDSPALVEQALNAGARGFLSKR 102 Query: 385 IRKNEL 368 +EL Sbjct: 103 CSPDEL 108
>IRLR_BURPS (O31395) Transcriptional activator protein irlR| Length = 229 Score = 38.5 bits (88), Expect = 0.020 Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 1/118 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 VE++ T +R L + G+ E+G+ E + DL++ +V +P G +L Sbjct: 6 VEDEPKTGMYLRKGLTEAGFIADWVEDGVTGLHQAETEE--YDLIILDVMLPGHDGWTVL 63 Query: 508 SKIT-SHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 ++ +HS PV+ ++ D + K L GA D++VKP EL + I RR Sbjct: 64 ERLRRAHST----PVLFLTARDDVGDRVKGLELGADDYVVKPFDFVELVARVRSILRR 117
>CHEB_TREPA (O83639) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 403 Score = 38.5 bits (88), Expect = 0.020 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 2/79 (2%) Frame = -2 Query: 616 AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK--NDS 443 A NG A LE VQ D++L ++ MP ++G+ L + I IPVI++S + Sbjct: 38 AMNGRFALDMLERVQP--DVILLDLEMPHMNGLQFLEQRKRLRI--DIPVIILSSIAKEG 93 Query: 442 MSTVFKCLSKGAVDFLVKP 386 +CL GA DF+ KP Sbjct: 94 ARVTMQCLELGASDFVTKP 112
>BASR_ECOLI (P30843) Transcriptional regulatory protein basR/pmrA| Length = 222 Score = 38.1 bits (87), Expect = 0.026 Identities = 26/93 (27%), Positives = 45/93 (48%) Frame = -2 Query: 616 AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMS 437 AE L+A Y LV+ ++ +P G+ L++I +PV++++ D+++ Sbjct: 36 AEQSLEAGHY--------SLVVLDLGLPDEDGLHFLARIRQKKYT--LPVLILTARDTLT 85 Query: 436 TVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 L GA D+LVKP EL + + RR Sbjct: 86 DKIAGLDVGADDYLVKPFALEELHARIRALLRR 118
>Y4XI_RHISN (P55701) Probable transcriptional regulatory protein y4xI| Length = 226 Score = 38.1 bits (87), Expect = 0.026 Identities = 21/75 (28%), Positives = 39/75 (52%) Frame = -2 Query: 562 DLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPI 383 +++L E+ +P G+ L ++ S +P ++MS+ D + + GA DFL KP+ Sbjct: 44 EILLLELVLPDGDGLDWLRQLRSDGY--SVPAVIMSRLDDLEKRISVFNSGADDFLRKPV 101 Query: 382 RKNELKTLWQHIWRR 338 +EL + + RR Sbjct: 102 STDELIARMRALLRR 116
>CHEB_PYRHO (O58192) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 368 Score = 38.1 bits (87), Expect = 0.026 Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 8/102 (7%) Frame = -2 Query: 646 LXKCGYEVISAENGLDAWQYLEDVQN-RIDLVLTEVAMPCLSGIGLLSKITSHSICKGIP 470 L CG A +G++A +E VQ R D+V +V MP ++G+ L I +P Sbjct: 33 LEVCG----EARDGIEA---IEMVQKCRPDVVTLDVEMPRMNGLDALRVIMKRY---PVP 82 Query: 469 VIMMSK--NDSMSTVFKCLSKGAVDFLVKP-----IRKNELK 365 VIM+S + K L GA+DF+ KP I ELK Sbjct: 83 VIMISALTQEGADATIKALEYGAIDFIPKPSSSISINMKELK 124
>SP0A_CLOBE (P52936) Stage 0 sporulation protein A homolog (Fragment)| Length = 223 Score = 38.1 bits (87), Expect = 0.026 Identities = 22/77 (28%), Positives = 44/77 (57%) Frame = -2 Query: 616 AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMS 437 A++G +A + + V+ + DLV+ ++ MP L G+G+L K+ + + K +I++S Sbjct: 37 AKDGSEALELI--VERKPDLVILDIIMPHLDGLGVLEKLNTMQLEKVPRIIILSAVGQDK 94 Query: 436 TVFKCLSKGAVDFLVKP 386 + ++ GA + VKP Sbjct: 95 ITQQAITLGADYYTVKP 111
>SP0A_BACSH (P42012) Stage 0 sporulation protein A| Length = 263 Score = 38.1 bits (87), Expect = 0.026 Identities = 23/86 (26%), Positives = 43/86 (50%) Frame = -2 Query: 625 VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKND 446 + +A NG Q LE+ D++L ++ MP L G+ +L + + I VIM++ Sbjct: 32 IATASNGKVCLQMLEEYTP--DILLLDIIMPHLDGLAVLEAMYQNDRMSSIQVIMLTAFG 89 Query: 445 SMSTVFKCLSKGAVDFLVKPIRKNEL 368 + + + GA F++KP ++L Sbjct: 90 QEDVMKQAVDLGASYFMLKPFEFDQL 115
>VANR_ENTFC (Q06239) Regulatory protein vanR| Length = 231 Score = 38.1 bits (87), Expect = 0.026 Identities = 27/107 (25%), Positives = 50/107 (46%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++ +V L Y V +A + ++ ++ IDL + ++ +P SG+ + Sbjct: 8 VDDEHEIADLVELYLKNENYTVFKYYTAKEALECID--KSEIDLAILDIMLPGTSGLTIC 65 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 KI P+IM++ D+ L+ GA D++ KP R EL Sbjct: 66 QKIRDKHT---YPIIMLTGKDTEVDKITGLTIGADDYITKPFRPLEL 109
>YCF29_CYAPA (P48359) Probable transcriptional regulator ycf29| Length = 210 Score = 37.7 bits (86), Expect = 0.033 Identities = 24/117 (20%), Positives = 53/117 (45%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 ++ D R+ ++ L + G+ V + AW L+ + +IDL++ ++ MP + G L Sbjct: 7 LDTDIGIRNSLKLYLTEIGFHVEESTCVDQAWDILK--RKKIDLIICDIIMPGMGGFNFL 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 ++ ++ +PVI+++ G ++ KP EL + + + R Sbjct: 65 HQLRLNTDYCTLPVILLTTRGLTQDRIIGYKTGCDSYISKPFNIEELVVIIEGVLNR 121
>CHEB_PYRAB (Q9UYF3) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 368 Score = 37.7 bits (86), Expect = 0.033 Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 8/102 (7%) Frame = -2 Query: 646 LXKCGYEVISAENGLDAWQYLEDVQN-RIDLVLTEVAMPCLSGIGLLSKITSHSICKGIP 470 L CG A +G++A +E VQ R D+V +V MP ++G+ L I +P Sbjct: 33 LEVCG----EARDGIEA---IEMVQKCRPDVVTLDVEMPRMNGLDALRVIMKKY---PVP 82 Query: 469 VIMMSK--NDSMSTVFKCLSKGAVDFLVKP-----IRKNELK 365 VIM+S + K L GA+DF+ KP I ELK Sbjct: 83 VIMISALTQEGAEATIKALEYGAIDFIPKPSSSISINMRELK 124
>CHEB3_VIBCH (Q9KS59) Chemotaxis response regulator protein-glutamate| methylesterase of group 3 operon (EC 3.1.1.61) Length = 358 Score = 37.7 bits (86), Expect = 0.033 Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 2/83 (2%) Frame = -2 Query: 628 EVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK- 452 E+ +A +G+DA + Q D++ ++ MP + G+ L++I + + +P++M+S Sbjct: 27 EIKTARDGMDAIDKVMKWQP--DVMTLDINMPNMDGLTCLTQIM---VERPLPIVMLSSL 81 Query: 451 -NDSMSTVFKCLSKGAVDFLVKP 386 ++ T + L GAVDF+ KP Sbjct: 82 THEGAITTLEALYLGAVDFVAKP 104
>CHEB_OCEIH (Q8EQW0) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 352 Score = 37.4 bits (85), Expect = 0.044 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%) Frame = -2 Query: 625 VISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK-- 452 V A NG D + +Q D+V +V MP + G+ L +I + +PV+M+S Sbjct: 32 VAVARNGEDGLNKV--IQLSPDVVTLDVHMPKMDGMQALQRIMNEH---PVPVVMLSSVT 86 Query: 451 NDSMSTVFKCLSKGAVDFLVKP 386 + +S GAVDF++KP Sbjct: 87 KAGAEKTIQAISNGAVDFIMKP 108
>CHEB_THEMA (Q9WYN9) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 344 Score = 37.4 bits (85), Expect = 0.044 Identities = 23/77 (29%), Positives = 45/77 (58%) Frame = -2 Query: 616 AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMS 437 A++GL+A + + ++ + D++ ++ MP L+GI L I + + I V +++ + Sbjct: 37 AKDGLEAVE--KAIELKPDVITMDIEMPNLNGIEALKLIMKKAPTRVIMVSSLTEEGAAI 94 Query: 436 TVFKCLSKGAVDFLVKP 386 T+ + L GAVDF+ KP Sbjct: 95 TI-EALRNGAVDFITKP 110
>CHEB_BACSU (Q05522) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 357 Score = 37.4 bits (85), Expect = 0.044 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%) Frame = -2 Query: 628 EVI-SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK 452 EVI +A NG +A + +E ++ D++ +V MP ++G + KI +PVIM+S Sbjct: 28 EVIGTARNGEEALKKIELLKP--DVITLDVEMPVMNGTDTVRKIIE---IYNLPVIMVSS 82 Query: 451 NDSMST--VFKCLSKGAVDFLVKP 386 CL GA DF+ KP Sbjct: 83 QTEKGKECTINCLEIGAFDFITKP 106
>CHVI_AGRTU (Q07783) Transcriptional regulatory protein chvI| Length = 241 Score = 37.4 bits (85), Expect = 0.044 Identities = 37/144 (25%), Positives = 57/144 (39%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V++D V L + GY V + +G A L + L + ++ MP + G+ LL Sbjct: 7 VDDDRNILTSVSIALEREGYRVETYTDGASAVDGL--IARPPQLAIFDIKMPRMDGMELL 64 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRRCXX 329 ++ S IPVI ++ D L GA DF+ KP + L + I RR Sbjct: 65 RRLRQKS---DIPVIFLTSKDEEIDELFGLKMGADDFITKPFSQRLLVERVKAILRRASS 121 Query: 328 XXXXXXXXXIQKCSKPKTGDEYAK 257 K T D+ A+ Sbjct: 122 REASAATGGTLK----PTADQQAR 141
>CHEB_GEOKA (Q5L0L0) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 349 Score = 37.4 bits (85), Expect = 0.044 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 3/84 (3%) Frame = -2 Query: 628 EVI-SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK 452 EVI +A NG +A + + + R D+V +V MP ++G+ L +I +PV+M+S Sbjct: 30 EVIGTARNGREALEKIAAL--RPDVVTLDVEMPVMNGLETLQRIMRDH---PVPVVMVSS 84 Query: 451 N--DSMSTVFKCLSKGAVDFLVKP 386 + + GAVDF+ KP Sbjct: 85 TTTEGAENTIAAMQYGAVDFVAKP 108
>SP0A_BACTU (P0A4I4) Stage 0 sporulation protein A| Length = 264 Score = 37.4 bits (85), Expect = 0.044 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 1/95 (1%) Frame = -2 Query: 628 EVI-SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK 452 EVI +A NG + L D Q D+++ ++ MP L G+ +L K+ K VIM++ Sbjct: 30 EVIGTAYNGQECLNLLTDKQP--DVLVLDIIMPHLDGLAVLEKMRHIERLKQPSVIMLTA 87 Query: 451 NDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHI 347 K + GA F++KP +++ L HI Sbjct: 88 FGQEDVTKKAVDLGASYFILKPF---DMENLTSHI 119
>SP0A_BACCR (P0A4I3) Stage 0 sporulation protein A| Length = 264 Score = 37.4 bits (85), Expect = 0.044 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 1/95 (1%) Frame = -2 Query: 628 EVI-SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK 452 EVI +A NG + L D Q D+++ ++ MP L G+ +L K+ K VIM++ Sbjct: 30 EVIGTAYNGQECLNLLTDKQP--DVLVLDIIMPHLDGLAVLEKMRHIERLKQPSVIMLTA 87 Query: 451 NDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHI 347 K + GA F++KP +++ L HI Sbjct: 88 FGQEDVTKKAVDLGASYFILKPF---DMENLTSHI 119
>ALGR_PSEAE (P26275) Positive alginate biosynthesis regulatory protein| Length = 248 Score = 37.4 bits (85), Expect = 0.044 Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 2/91 (2%) Frame = -2 Query: 634 GYEVI--SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIM 461 GY V+ SA NG +A ++ ++ D+VL ++ MP L G+ + +++ VI Sbjct: 25 GYRVLEPSASNGEEALTLIDSLKP--DIVLLDIRMPGLDGLQVAARLCEREAPPA--VIF 80 Query: 460 MSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 + +D + + AV +LVKP+R +L Sbjct: 81 CTAHDEFA--LEAFQVSAVGYLVKPVRSEDL 109
>SP0A_BACAN (P52928) Stage 0 sporulation protein A| Length = 264 Score = 37.0 bits (84), Expect = 0.057 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Frame = -2 Query: 628 EVI-SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK 452 EVI +A NG + L+D Q D+++ ++ MP L G+ +L K+ + VIM++ Sbjct: 30 EVIGTAYNGQECLNLLKDKQP--DVLVLDIIMPHLDGLAVLEKMRHIERLRQPSVIMLTA 87 Query: 451 NDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHI 347 K + GA F++KP +++ L HI Sbjct: 88 FGQEDVTKKAVDLGASYFILKPF---DMENLTSHI 119
>CHEB_NATPD (Q3IRR4) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 355 Score = 37.0 bits (84), Expect = 0.057 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 6/107 (5%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISA----ENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 521 V++ R V+ +L G V++ E+G++A + E D+V ++ MP + G Sbjct: 11 VDDSQFMRTVISDMLDDAGITVVATASNGESGVEAVRTHEP-----DVVTMDLKMPGMDG 65 Query: 520 IGLLSKITSHSICKGIPVIMMSKN--DSMSTVFKCLSKGAVDFLVKP 386 I +I PV+++S + D F+ + +GAVDF KP Sbjct: 66 IEATGRIMDEC---PTPVLVLSAHADDGAELTFEAMDEGAVDFFKKP 109
>DCTD_RHILE (P10046) C4-dicarboxylate transport transcriptional regulatory| protein dctD Length = 448 Score = 37.0 bits (84), Expect = 0.057 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQ-NRIDLVLTEVAMPCLSGIGL 512 +++D R L G+ V SA +G A L D+ + V+T++ MP + G+ L Sbjct: 10 IDDDKDLRRATAQTLELAGFSV-SAYDGAKA--ALADLPADFAGPVVTDIRMPEIDGLQL 66 Query: 511 LSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 + + + +PVI+M+ + + + + GA DF+ KP + L Sbjct: 67 FATLQGMDV--DLPVILMTGHGDIPMAVQAIQDGAYDFIAKPFAADRL 112
>BARA_SHIFL (P59342) Signal transduction histidine-protein kinase barA (EC| 2.7.13.3) Length = 918 Score = 37.0 bits (84), Expect = 0.057 Identities = 29/110 (26%), Positives = 48/110 (43%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++ ++ ALL V ++G A + + Q DL+L ++ MP + GI Sbjct: 673 VDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAK--QMPFDLILMDIQMPDMDGIRAC 730 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 I + PVI ++ + K L G D+L KPI + L L Sbjct: 731 ELIHQLPHQRQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNL 780
>TCTD_SALTY (P22104) Transcriptional regulatory protein tctD| Length = 224 Score = 36.6 bits (83), Expect = 0.074 Identities = 26/109 (23%), Positives = 52/109 (47%) Frame = -2 Query: 664 HVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSI 485 H + L + G+ V +GL A L L + ++ MP + G+ ++ ++ Sbjct: 14 HWLEKALVQNGFAVDCVFDGLAADHLLHS--EMYALAVLDINMPGMDGLEVVQRLRKRG- 70 Query: 484 CKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + +PV++++ +++ K L+ GA D+L KP EL + + RR Sbjct: 71 -QTLPVLLLTARSAVADRVKGLNVGADDYLPKPFELEELDARLRALLRR 118
>CIAR_STRR6 (P0A4H8) Transcriptional regulatory protein ciaR| Length = 224 Score = 36.6 bits (83), Expect = 0.074 Identities = 27/97 (27%), Positives = 44/97 (45%) Frame = -2 Query: 628 EVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKN 449 +V E GL E DL+L ++ +P +G +L ++ I PV++M+ Sbjct: 29 QVFDGEEGL-----YEAESGVYDLILLDLMLPEKNGFQVLKELREKGITT--PVLIMTAK 81 Query: 448 DSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +S+ GA D+L KP ELK Q + +R Sbjct: 82 ESLDDKGHGFELGADDYLTKPFYLEELKMRIQALLKR 118
>CIAR_STRPN (P0A4H7) Transcriptional regulatory protein ciaR| Length = 224 Score = 36.6 bits (83), Expect = 0.074 Identities = 27/97 (27%), Positives = 44/97 (45%) Frame = -2 Query: 628 EVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKN 449 +V E GL E DL+L ++ +P +G +L ++ I PV++M+ Sbjct: 29 QVFDGEEGL-----YEAESGVYDLILLDLMLPEKNGFQVLKELREKGITT--PVLIMTAK 81 Query: 448 DSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 +S+ GA D+L KP ELK Q + +R Sbjct: 82 ESLDDKGHGFELGADDYLTKPFYLEELKMRIQALLKR 118
>SP0A_CLOAB (P58253) Stage 0 sporulation protein A homolog| Length = 281 Score = 36.6 bits (83), Expect = 0.074 Identities = 21/77 (27%), Positives = 44/77 (57%) Frame = -2 Query: 616 AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMS 437 A++G++A + +E+ + DLV+ ++ MP L G+G+L K+ + +I++S Sbjct: 37 AKDGVEALKLIEN--KKPDLVVLDIIMPRLDGLGVLEKLNNKDAENLPRIIVLSAVGQDK 94 Query: 436 TVFKCLSKGAVDFLVKP 386 + ++ GA ++VKP Sbjct: 95 ITQRAITLGADYYVVKP 111
>BASR_SALTY (P36556) Transcriptional regulatory protein basR/pmrA| Length = 222 Score = 36.6 bits (83), Expect = 0.074 Identities = 24/94 (25%), Positives = 48/94 (51%) Frame = -2 Query: 619 SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSM 440 +AE+ L++ Y L++ ++ +P G+ L++I +PV++++ +D++ Sbjct: 35 AAEHSLESGHY--------SLMVLDLGLPDEDGLHFLTRIRQKKYT--LPVLILTAHDTL 84 Query: 439 STVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 + L GA D+LVKP EL + + RR Sbjct: 85 NDRITGLDVGADDYLVKPFALEELHARIRALLRR 118
>REGX3_MYCLE (P54884) Sensory transduction protein regX3| Length = 198 Score = 36.6 bits (83), Expect = 0.074 Identities = 23/75 (30%), Positives = 38/75 (50%) Frame = -2 Query: 562 DLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPI 383 D+VL ++ +P +SG + ++ S +PVIM++ DS L GA D++ KP Sbjct: 18 DIVLLDLMLPGMSGTDVYKQLRVRS---SVPVIMVTARDSEIDKVVGLELGADDYVTKPY 74 Query: 382 RKNELKTLWQHIWRR 338 EL + + RR Sbjct: 75 SARELIARIRAVLRR 89
>BARA_ECOLI (P0AEC5) Signal transduction histidine-protein kinase barA (EC| 2.7.13.3) Length = 918 Score = 36.6 bits (83), Expect = 0.074 Identities = 29/110 (26%), Positives = 48/110 (43%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++ ++ ALL V ++G A + + Q DL+L ++ MP + GI Sbjct: 673 VDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAK--QMPFDLILMDIQMPDMDGIRAC 730 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 I + PVI ++ + K L G D+L KPI + L L Sbjct: 731 ELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNL 780
>BARA_ECOL6 (P0AEC6) Signal transduction histidine-protein kinase barA (EC| 2.7.13.3) Length = 918 Score = 36.6 bits (83), Expect = 0.074 Identities = 29/110 (26%), Positives = 48/110 (43%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++ ++ ALL V ++G A + + Q DL+L ++ MP + GI Sbjct: 673 VDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAK--QMPFDLILMDIQMPDMDGIRAC 730 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 I + PVI ++ + K L G D+L KPI + L L Sbjct: 731 ELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNL 780
>BARA_ECO57 (P0AEC7) Signal transduction histidine-protein kinase barA (EC| 2.7.13.3) Length = 918 Score = 36.6 bits (83), Expect = 0.074 Identities = 29/110 (26%), Positives = 48/110 (43%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLL 509 V+++ ++ ALL V ++G A + + Q DL+L ++ MP + GI Sbjct: 673 VDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAK--QMPFDLILMDIQMPDMDGIRAC 730 Query: 508 SKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTL 359 I + PVI ++ + K L G D+L KPI + L L Sbjct: 731 ELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNL 780
>AGMR_PSEAE (P29369) Glycerol metabolism activator (Protein agmR)| Length = 221 Score = 36.2 bits (82), Expect = 0.097 Identities = 23/82 (28%), Positives = 43/82 (52%) Frame = -2 Query: 634 GYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMS 455 G EV+ + LD+ L + +DL+L ++ MP + G+ L + + + IPV+++S Sbjct: 27 GSEVMETAD-LDSALGLTQEHDDLDLILLDLNMPGMHGLNGLMNLRNEA--PTIPVVIVS 83 Query: 454 KNDSMSTVFKCLSKGAVDFLVK 389 V + ++ GAV F+ K Sbjct: 84 AEQDKQVVLQAITYGAVGFITK 105
>DCUR_SHIFL (P59339) Transcriptional regulatory protein dcuR| Length = 239 Score = 35.8 bits (81), Expect = 0.13 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Frame = -2 Query: 565 IDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 386 IDL+L ++ M +G+ LL + ++ CK +++ S D+ +T+ L G VD+L+KP Sbjct: 50 IDLILLDIYMQKENGLDLLP-VLHNARCKSDVIVISSAADA-ATIKDSLHYGVVDYLIKP 107 Query: 385 I---RKNELKTLWQ 353 R E T W+ Sbjct: 108 FQASRFEEALTGWR 121
>DCUR_ECOLI (P0AD01) Transcriptional regulatory protein dcuR| Length = 239 Score = 35.8 bits (81), Expect = 0.13 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Frame = -2 Query: 565 IDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 386 IDL+L ++ M +G+ LL + ++ CK +++ S D+ +T+ L G VD+L+KP Sbjct: 50 IDLILLDIYMQKENGLDLLP-VLHNARCKSDVIVISSAADA-ATIKDSLHYGVVDYLIKP 107 Query: 385 I---RKNELKTLWQ 353 R E T W+ Sbjct: 108 FQASRFEEALTGWR 121
>DCUR_ECOL6 (P59338) Transcriptional regulatory protein dcuR| Length = 239 Score = 35.8 bits (81), Expect = 0.13 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Frame = -2 Query: 565 IDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 386 IDL+L ++ M +G+ LL + ++ CK +++ S D++ T+ L G VD+L+KP Sbjct: 50 IDLILLDIYMQKENGLDLLP-VLHNARCKSDVIVISSAADAV-TIKDSLHYGVVDYLIKP 107 Query: 385 I---RKNELKTLWQ 353 R E T W+ Sbjct: 108 FQASRFEEALTGWR 121
>DCUR_ECO57 (P0AD02) Transcriptional regulatory protein dcuR| Length = 239 Score = 35.8 bits (81), Expect = 0.13 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Frame = -2 Query: 565 IDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKP 386 IDL+L ++ M +G+ LL + ++ CK +++ S D+ +T+ L G VD+L+KP Sbjct: 50 IDLILLDIYMQKENGLDLLP-VLHNARCKSDVIVISSAADA-ATIKDSLHYGVVDYLIKP 107 Query: 385 I---RKNELKTLWQ 353 R E T W+ Sbjct: 108 FQASRFEEALTGWR 121
>CHVI_RHIME (P50350) Transcriptional regulatory protein chvI| Length = 240 Score = 35.8 bits (81), Expect = 0.13 Identities = 28/99 (28%), Positives = 46/99 (46%) Frame = -2 Query: 634 GYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMS 455 GY+V + +G A + L + L + ++ MP + G+ LL ++ S +PVI ++ Sbjct: 25 GYKVETYTDGASALEGL--LARPPQLAIFDIKMPRMDGMELLRRLRQKS---DLPVIFLT 79 Query: 454 KNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 D L GA DF+ KP + L + I RR Sbjct: 80 SKDEEIDELFGLKMGADDFITKPFSQRLLVERVKAILRR 118
>RPRY_BACFR (Q9AE24) Transcriptional regulatory protein rprY| Length = 236 Score = 35.8 bits (81), Expect = 0.13 Identities = 28/116 (24%), Positives = 52/116 (44%) Frame = -2 Query: 685 ENDDCTRHVVRALLXKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLS 506 E+D+ ++R L GY +G ++ ++N+ DL + +V MP G L Sbjct: 14 EDDENLGMLLREYLQAKGYSAELYPDGEAGFKAF--LKNKYDLCVFDVMMPKKDGFTLAQ 71 Query: 505 KITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 ++ + + IP+I ++ + + GA D++ KP EL + I RR Sbjct: 72 EVRAANA--EIPIIFLTAKTLKEDILEGFKIGADDYITKPFSMEELTFRIEAILRR 125
>CCDB_BACSU (P45709) Protein ccdB| Length = 120 Score = 35.8 bits (81), Expect = 0.13 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGY----EVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSG 521 V++ R +R +L + Y E E D ++ L R DLV ++ MP +G Sbjct: 7 VDDAKFMRVKIREILEEANYIIAGEAADGEQAADLYKKL-----RPDLVTMDITMPVKNG 61 Query: 520 IGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNEL 368 I L I + VIM + V + + GA DF+VKP + ++ Sbjct: 62 IKALRDILTFD--PKAKVIMCTAMRQQRIVTEAIELGAKDFIVKPFEETKV 110
>Y693_VIBCH (Q9KU36) Hypothetical response regulatory protein VC0693| Length = 237 Score = 35.4 bits (80), Expect = 0.17 Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 2/119 (1%) Frame = -2 Query: 688 VENDDCTRHVVRALLXKCGY-EVIS-AENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIG 515 ++++ R + LL + G EVI A N ++ + + Q + D+V ++ MP +SGI Sbjct: 7 IDDERFAREELAELLAESGQIEVIGQASNAIEGLKKIN--QLKPDVVFLDIQMPQISGIE 64 Query: 514 LLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIWRR 338 LLS + ++ + V+ ++ D + + A D+L+KP+ L Q + R+ Sbjct: 65 LLSMLDPETMPE---VVFVTAYDQYA--LQAFEDNAFDYLLKPVDTERLAKTVQRLLRQ 118
>CHEB_BACHD (Q9KA55) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 346 Score = 35.4 bits (80), Expect = 0.17 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 2/80 (2%) Frame = -2 Query: 619 SAENGLDAWQYLEDVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKN--D 446 +A NG DA + + + D++ +V MP + GI L ++ S + +P+I++S + Sbjct: 35 TARNGEDALKKRKTLAP--DVMTLDVEMPVMDGIETLKRLMSEN---PLPIIIVSSTTKE 89 Query: 445 SMSTVFKCLSKGAVDFLVKP 386 + GAVDF+ KP Sbjct: 90 GAENALTAMELGAVDFITKP 109
>SPAR_BACSU (P33112) Subtilin biosynthesis regulatory protein spaR| Length = 220 Score = 35.4 bits (80), Expect = 0.17 Identities = 21/71 (29%), Positives = 32/71 (45%) Frame = -2 Query: 580 DVQNRIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVD 401 DV DL+L +V MP + G L +I C P++ ++ + K L G D Sbjct: 40 DVFQGYDLILLDVMMPDIDGFELCKQIRPLVDC---PILFLTAKTEEEAIVKGLITGGDD 96 Query: 400 FLVKPIRKNEL 368 ++ KP EL Sbjct: 97 YITKPFGVREL 107
>CHEB_NITEU (Q820K0) Chemotaxis response regulator protein-glutamate| methylesterase (EC 3.1.1.61) Length = 358 Score = 35.0 bits (79), Expect = 0.22 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Frame = -2 Query: 562 DLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK--NDSMSTVFKCLSKGAVDFLVK 389 D++ +V MP + G+ L K+ + +PV+M+S F+ L GAVDF+ K Sbjct: 51 DVLTLDVEMPKMDGLEFLEKLMR---LRPMPVVMVSTLTERGSEVTFRALELGAVDFVAK 107 Query: 388 P 386 P Sbjct: 108 P 108
>CHEB2_PSESM (Q888V8) Chemotaxis response regulator protein-glutamate| methylesterase of group 2 operon (EC 3.1.1.61) Length = 358 Score = 35.0 bits (79), Expect = 0.22 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Frame = -2 Query: 562 DLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSK--NDSMSTVFKCLSKGAVDFLVK 389 D+++ +V MP + GI L KI S + PV++ S T + LS GAV+ + K Sbjct: 53 DVIVLDVEMPRMDGITFLKKIMSE---RPTPVVICSSLTQKGAETSLQALSAGAVEIITK 109 Query: 388 P 386 P Sbjct: 110 P 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,542,467 Number of Sequences: 219361 Number of extensions: 1575444 Number of successful extensions: 4352 Number of sequences better than 10.0: 340 Number of HSP's better than 10.0 without gapping: 4184 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4289 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
