| Clone Name | rbaal35k20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | KINL_LEICH (P46865) Kinesin-like protein K39 (Fragment) | 28 | 7.9 | 2 | ZO22_XENLA (P18745) Oocyte zinc finger protein XLCOF22 | 28 | 7.9 |
|---|
>KINL_LEICH (P46865) Kinesin-like protein K39 (Fragment)| Length = 955 Score = 27.7 bits (60), Expect = 7.9 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +1 Query: 13 WSINTQNKCAANPRTQAESYGIIIIVLV 96 WS+ T + C A P TQA+ + I LV Sbjct: 80 WSVETPDACGATPATQADVFRTIGYPLV 107
>ZO22_XENLA (P18745) Oocyte zinc finger protein XLCOF22| Length = 435 Score = 27.7 bits (60), Expect = 7.9 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 7/52 (13%) Frame = -1 Query: 254 DSRTHARTHAG--MH-----GSCMSRASFNIRIRRFSFPRKIIFAPRSAGAC 120 DS H RTH G +H G C S +S + RR S R+ F+ G C Sbjct: 83 DSDKHERTHTGKKLHSCSQCGKCFSSSSDLLAHRRQSHTREKPFSCSECGKC 134 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,946,635 Number of Sequences: 219361 Number of extensions: 799248 Number of successful extensions: 1974 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1946 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1974 length of database: 80,573,946 effective HSP length: 70 effective length of database: 65,218,676 effective search space used: 1565248224 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)