>emb|AL392043.21| Human DNA sequence from clone RP11-288G11 on chromosome 10 Contains the
             3' end of the INPP5A gene for inositol
             polyphosphate-5-phosphatase 40kDa, a novel gene, the
             NKX6-2 gene for NK6 transcription factor related locus 2,
             a novel gene (DKFZp434A1721), the 3' end of a novel gene
             and ten CpG islands, complete sequence
          Length = 208064

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 55    aaactcccccatctgcccg 73
             |||||||||||||||||||
Sbjct: 67078 aaactcccccatctgcccg 67060

>gb|AF163841.3|AF163841 Myxococcus xanthus 4-oxalocrotonate decarboxylase-like protein,
            cysteine dioxygenase-like protein, putative histidine
            protein kinase (hpkA), putative serine/threonine protein
            kinase (pknD1), putative histidine protein kinase (espA),
            putative membrane protein (espB), putative
            serine/threonine protein kinase (pknD2), putative serine
            protease DO-like precursor (htrA), and putative response
            regulator genes, complete cds; and unknown genes
          Length = 18424

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 80   cagcggttgccggtgggcg 98
            |||||||||||||||||||
Sbjct: 1758 cagcggttgccggtgggcg 1740


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 333,291
Number of Sequences: 3902068
Number of extensions: 333291
Number of successful extensions: 19598
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19594
Number of HSP's gapped (non-prelim): 4
length of query: 109
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 88
effective length of database: 17,151,101,840
effective search space: 1509296961920
effective search space used: 1509296961920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)