ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal35k04 |
|---|---|
| Clone Library Name | barley_pub |
>MAD14_ORYSA (Q7Y023) MADS-box transcription factor 14 (OsMADS14) (Protein| APETALA1-like B) (Protein AGAMOUS-like 10) (FDRMADS6) (RMADS211) Length = 246 Score = 117 bits (293), Expect = 4e-26 Identities = 65/110 (59%), Positives = 75/110 (68%), Gaps = 2/110 (1%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQKXXXXXX--XXXXXXXXXXX 509 KHIR+RK+QLM ESI+ELQ+KE+SLQEENKVLQKELVEKQK Sbjct: 137 KHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQWDQTQPQTSSSS 196 Query: 508 XSFMMRDAPPVADTSNHPAAAGERAEDVAVQPQVPLRTALPLWMVSHING 359 SFMMR+A P + SN+PAAAGER EDVA +R LP WM+SHING Sbjct: 197 SSFMMREALPTTNISNYPAAAGERIEDVAAGQPQHVRIGLPPWMLSHING 246
>MAD15_ORYSA (Q6Q9I2) MADS-box transcription factor 15 (OsMADS15) (Protein| APETALA1-like A) (FDRMADS3) (RMADS215) Length = 267 Score = 79.0 bits (193), Expect = 1e-14 Identities = 58/130 (44%), Positives = 65/130 (50%), Gaps = 23/130 (17%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK--------------XXXXX 545 KHI +RK+ LM ESISELQKKERSLQEENK LQKELVE+QK Sbjct: 137 KHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQKNVRGQQQVGQWDQTQVQAQ 196 Query: 544 XXXXXXXXXXXXXSFMMRDAPPVADTSN---HPAAAGER-----AEDVAVQPQVPLRT-A 392 S M+RD + N P GER A VA Q QV LR Sbjct: 197 AQAQPQAQTSSSSSSMLRDQQALLPPQNICYPPVMMGERNDAAAAAAVAAQGQVQLRIGG 256 Query: 391 LPLWMVSHIN 362 LP WM+SH+N Sbjct: 257 LPPWMLSHLN 266
>AGL8_SOLCO (O22328) Agamous-like MADS-box protein AGL8 homolog| Length = 250 Score = 68.9 bits (167), Expect = 1e-11 Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 6/114 (5%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQKXXXXXXXXXXXXXXXXXXS 503 KHIR+RKNQLMHESIS LQK++R+LQE+N L K++ E++K + Sbjct: 137 KHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVEQQNQWDQQNHEINSST 196 Query: 502 FMM---RDAPPVADTSNHPAAA--GERAEDVAVQPQ-VPLRTALPLWMVSHING 359 F++ D+P + + S + GE + Q Q T +P WMV H+NG Sbjct: 197 FVLPQQLDSPHLGEASQNTNVVDNGEVEGGNSSQXQGAANNTVMPQWMVRHLNG 250
>AGL8_SOLTU (Q42429) Agamous-like MADS-box protein AGL8 homolog (POTM1-1)| Length = 250 Score = 66.2 bits (160), Expect = 9e-11 Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 6/114 (5%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQKXXXXXXXXXXXXXXXXXXS 503 KHIR+RKNQLMHESIS LQK++R+LQE+N L K++ E++K + Sbjct: 137 KHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVAQQNQWDQQNHEINSST 196 Query: 502 FMM---RDAPPVADT--SNHPAAAGE-RAEDVAVQPQVPLRTALPLWMVSHING 359 F++ D+P + + + + GE + + Q T +P WM+ H+NG Sbjct: 197 FVLPQQLDSPHLGEAYQNTNVVDNGEVEGGNSSQQQGAANNTVMPQWMLRHLNG 250
>AP1_SINAL (Q41276) Floral homeotic protein APETALA1 (MADS C)| Length = 254 Score = 61.2 bits (147), Expect = 3e-09 Identities = 25/41 (60%), Positives = 38/41 (92%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 KHIR+RKNQLMH+SI+ELQ+KE+++QE+N +L K++ E++K Sbjct: 137 KHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREK 177
>AGL8_LYCES (Q40170) Agamous-like MADS-box protein AGL8 homolog (TM4)| Length = 227 Score = 60.8 bits (146), Expect = 4e-09 Identities = 28/41 (68%), Positives = 36/41 (87%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 KHIR+RKNQLMHESIS LQKK+R+LQE+N L K++ E++K Sbjct: 137 KHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKEREK 177
>AP1_ARATH (P35631) Floral homeotic protein APETALA1 (Agamous-like MADS-box| protein AGL7) Length = 256 Score = 60.8 bits (146), Expect = 4e-09 Identities = 26/41 (63%), Positives = 37/41 (90%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 KHIR RKNQLM+ESI+ELQKKE+++QE+N +L K++ E++K Sbjct: 137 KHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREK 177
>MAD18_ORYSA (Q6Z4G0) MADS-box transcription factor 18 (OsMADS18) (MADS-box| protein 2) (OsMADS2) (MADS-box protein 28) (OsMADS28) (FDRMADS7) Length = 249 Score = 57.0 bits (136), Expect = 6e-08 Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 8/111 (7%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQKXXXXXXXXXXXXXXXXXXS 503 KHIR++KNQL+ ESISELQKKE+SL+ +N VLQK L+E +K Sbjct: 137 KHIRSKKNQLLFESISELQKKEKSLKNQNNVLQK-LMETEKEKNNAIINTNREEQNGATP 195 Query: 502 FMMRDAP-----PVADTSN---HPAAAGERAEDVAVQPQVPLRTALPLWMV 374 P P+ T+N P +GE + P + LP WM+ Sbjct: 196 STSSPTPVTAPDPIPTTNNSQSQPRGSGE--SEAQPSPAQAGNSKLPPWML 244
>CAL_ARATH (Q39081) Transcription factor CAULIFLOWER (Agamous-like MADS-box| protein AGL10) Length = 253 Score = 55.5 bits (132), Expect = 2e-07 Identities = 23/40 (57%), Positives = 35/40 (87%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQ 563 KHIR+RKNQLM+ES++ LQ+KE+ +QEEN +L K++ E++ Sbjct: 137 KHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERE 176
>AGL8_ARATH (Q38876) Agamous-like MADS-box protein AGL8 (Floral homeotic| protein AGL8) (Transcription factor FRUITFULL) Length = 242 Score = 48.9 bits (115), Expect = 2e-05 Identities = 23/41 (56%), Positives = 32/41 (78%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 K IR+RKNQ M ESIS LQKK+++LQ+ N L K++ E++K Sbjct: 137 KSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREK 177
>AGL8_SINAL (Q41274) Agamous-like MADS-box protein AGL8 homolog (MADS B)| Length = 241 Score = 48.5 bits (114), Expect = 2e-05 Identities = 23/41 (56%), Positives = 31/41 (75%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 K IR+RKNQ M ESIS LQKK++ LQ+ N L K++ E++K Sbjct: 137 KSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKEREK 177
>MADS3_ORYSA (Q40704) MADS-box transcription factor 3 (OsMADS3) (Protein| AGAMOUS-like) (RMADS222) Length = 236 Score = 39.3 bits (90), Expect = 0.012 Identities = 16/39 (41%), Positives = 28/39 (71%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 IRARKN+L++ + +QK+E LQ +N L+ ++VE ++ Sbjct: 139 IRARKNELLYAEVEYMQKREVELQNDNMYLRSKVVENER 177
>MAD34_ORYSA (Q6Q9H6) MADS-box transcription factor 34 (OsMADS34)| (RMADS212/RMADS217/RMADS221) Length = 239 Score = 38.5 bits (88), Expect = 0.021 Identities = 16/38 (42%), Positives = 30/38 (78%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 569 K IR+RK Q++ + + +L++KE+ LQ+ N+VL+++L E Sbjct: 137 KQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE 174
>GGM13_GNEGN (Q9XGJ4) MADS-box protein GGM13| Length = 237 Score = 38.5 bits (88), Expect = 0.021 Identities = 17/38 (44%), Positives = 28/38 (73%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQ 563 +R+RKNQLM + + L++KER L+++N L + L E+Q Sbjct: 135 VRSRKNQLMLQQLENLRRKERILEDQNSHLCRLLAEQQ 172
>AGL9_PETHY (Q03489) Agamous-like MADS-box protein AGL9 homolog (Floral| homeotic protein FBP2) (Floral-binding protein 2) Length = 241 Score = 38.1 bits (87), Expect = 0.027 Identities = 16/38 (42%), Positives = 27/38 (71%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 569 K IR+ + QLM + + +LQ+KE +L E N+ L++ L+E Sbjct: 138 KQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLME 175
>MAD29_ORYSA (Q6H711) MADS-box transcription factor 29 (OsMADS29)| Length = 260 Score = 37.7 bits (86), Expect = 0.035 Identities = 24/92 (26%), Positives = 43/92 (46%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQKXXXXXXXXXXXXXXXXXXSFM 497 +RARK+QL+++ + L++KE L+++N L + + E M Sbjct: 136 VRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINENHHQAAVGGGDVKA---------M 186 Query: 496 MRDAPPVADTSNHPAAAGERAEDVAVQPQVPL 401 + AP ++ + PA GE + A+Q PL Sbjct: 187 VEMAPVLSMLTAAPAYYGEESSSTALQLTPPL 218
>AGL9_LYCES (Q42464) Agamous-like MADS-box protein AGL9 homolog (TM5)| Length = 224 Score = 36.6 bits (83), Expect = 0.079 Identities = 15/38 (39%), Positives = 27/38 (71%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 569 K IR+ + QLM + +++ Q+KE +L E N+ L++ L+E Sbjct: 138 KQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQRLME 175
>AGL9_SINAL (O04067) Agamous-like MADS-box protein AGL9 homolog (MADS D)| Length = 254 Score = 36.6 bits (83), Expect = 0.079 Identities = 17/38 (44%), Positives = 24/38 (63%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 569 K IRA + Q M + +++LQ KER L E NK L+ L + Sbjct: 140 KQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLAD 177
>SEP3_ARATH (O22456) Developmental protein SEPALLATA3 (Agamous-like MADS-box| protein AGL9) Length = 251 Score = 36.2 bits (82), Expect = 0.10 Identities = 17/38 (44%), Positives = 24/38 (63%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 569 K IRA + Q M + +++LQ KER L E NK L+ L + Sbjct: 140 KQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLAD 177
>M17_MAIZE (Q8VWM8) MADS-box protein ZMM17| Length = 259 Score = 36.2 bits (82), Expect = 0.10 Identities = 14/39 (35%), Positives = 29/39 (74%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 +RARK+QL+++ + L++KE+ L+++N L + + E Q+ Sbjct: 136 VRARKHQLLNQQLDNLRRKEQILEDQNTFLYRMINENQQ 174
>MAD58_ORYSA (Q2V0P1) MADS-box transcription factor 58 (OsMADS58)| Length = 272 Score = 35.8 bits (81), Expect = 0.13 Identities = 15/39 (38%), Positives = 26/39 (66%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 IRARKN+L+ I +Q++E LQ +N L+ ++ E ++ Sbjct: 180 IRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESER 218
>MADS5_ORYSA (Q7GCP2) MADS-box transcription factor 5 (OsMADS5) (FDRMADS2)| Length = 225 Score = 35.4 bits (80), Expect = 0.18 Identities = 15/37 (40%), Positives = 28/37 (75%) Frame = -1 Query: 679 HIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 569 +IR+ KNQ + + + EL++KE+ LQ+ NK L++++ E Sbjct: 139 NIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQE 175
>AG_ARATH (P17839) Floral homeotic protein AGAMOUS| Length = 252 Score = 35.4 bits (80), Expect = 0.18 Identities = 13/39 (33%), Positives = 27/39 (69%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 IR++KN+L+ I +QK+E L +N++L+ ++ E ++ Sbjct: 154 IRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENER 192
>MADS6_ORYSA (Q6EU39) MADS-box transcription factor 6 (OsMADS6)| Length = 250 Score = 35.4 bits (80), Expect = 0.18 Identities = 17/33 (51%), Positives = 23/33 (69%) Frame = -1 Query: 673 RARKNQLMHESISELQKKERSLQEENKVLQKEL 575 R RK QLM E + EL++KER L E N+ L+ +L Sbjct: 138 RQRKTQLMMEQVEELRRKERQLGEINRQLKHKL 170
>AGL14_ARATH (Q38838) Agamous-like MADS-box protein AGL14| Length = 221 Score = 35.0 bits (79), Expect = 0.23 Identities = 16/33 (48%), Positives = 25/33 (75%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKE 578 IRA+K QL+ E +L++KER+L ENK+L ++ Sbjct: 138 IRAKKYQLLREETEKLKEKERNLIAENKMLMEK 170
>MAD17_ORYSA (Q7XUN2) MADS-box transcription factor 17 (OsMADS17) (NMADS3)| (RMADS213) Length = 249 Score = 35.0 bits (79), Expect = 0.23 Identities = 16/33 (48%), Positives = 23/33 (69%) Frame = -1 Query: 673 RARKNQLMHESISELQKKERSLQEENKVLQKEL 575 R RK Q+M E + +L++KER L E NK L+ +L Sbjct: 140 RQRKTQIMMEQVDDLRRKERQLGELNKQLKNKL 172
>SOC1_ARATH (O64645) SUPPRESSOR OF CONSTANS OVEREXPRESSION 1 protein| (Agamous-like MADS-box protein AGL20) Length = 214 Score = 34.7 bits (78), Expect = 0.30 Identities = 16/35 (45%), Positives = 25/35 (71%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKE 578 K IRARK Q+ E I +L++KE++L EN+ L ++ Sbjct: 136 KCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEK 170
>AGL19_ARATH (O82743) Agamous-like MADS-box protein AGL19| Length = 219 Score = 34.7 bits (78), Expect = 0.30 Identities = 16/33 (48%), Positives = 26/33 (78%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKE 578 IRA+K QL+ E I +L+ +ER+L +ENK L+++ Sbjct: 137 IRAKKYQLLREEIEKLKAEERNLVKENKDLKEK 169
>MADS7_ORYSA (Q6Q9I1) MADS-box transcription factor 7 (OsMADS7) (Protein| AGAMOUS-like 6) (MADS-box protein 45) (OsMADS45) (FDRMADS1) (RMADS216) Length = 249 Score = 34.3 bits (77), Expect = 0.39 Identities = 13/38 (34%), Positives = 27/38 (71%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVE 569 KH+R + + + + ++ELQ+KE+ + E N+ L+++L E Sbjct: 139 KHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEE 176
>AG_BRANA (Q01540) Floral homeotic protein AGAMOUS| Length = 252 Score = 34.3 bits (77), Expect = 0.39 Identities = 13/39 (33%), Positives = 27/39 (69%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 IR++KN+L+ I +QK+E L +N++L+ ++ E ++ Sbjct: 154 IRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIAENER 192
>MAD13_ORYSA (Q2QW53) MADS-box transcription factor 13 (OsMADS13) (RMADS206)| Length = 270 Score = 34.3 bits (77), Expect = 0.39 Identities = 15/39 (38%), Positives = 27/39 (69%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 IRARKN+L+ I+ + K+E LQ +N L+ ++ E+++ Sbjct: 141 IRARKNELLASEINYMAKREIELQNDNMDLRTKIAEEEQ 179
>FLC_ARATH (Q9S7Q7) FLOWERING LOCUS C protein (MADS-box protein FLOWERING| LOCUS F) Length = 196 Score = 33.9 bits (76), Expect = 0.51 Identities = 14/33 (42%), Positives = 25/33 (75%) Frame = -1 Query: 673 RARKNQLMHESISELQKKERSLQEENKVLQKEL 575 RA+K +LM + + L++KE+ L+EEN+VL ++ Sbjct: 132 RAKKTELMLKLVENLKEKEKMLKEENQVLASQM 164
>AG_PANGI (Q40872) Floral homeotic protein AGAMOUS (GAG2)| Length = 242 Score = 33.9 bits (76), Expect = 0.51 Identities = 14/39 (35%), Positives = 25/39 (64%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 IR++KN+L+ I +QKKE L N+ L+ ++ E ++ Sbjct: 154 IRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENER 192
>AGL31_ARATH (Q9FPN7) Agamous-like MADS-box protein AGL31 (Protein MADS| AFFECTING FLOWERING 2) Length = 196 Score = 33.9 bits (76), Expect = 0.51 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = -1 Query: 673 RARKNQLMHESISELQKKERSLQEENKVLQKELVEK 566 RARK +LM + LQK E L+EEN+ L ++ +K Sbjct: 132 RARKTELMMGEVKSLQKTENLLREENQTLASQVGKK 167
>MAD26_ORYSA (Q8L887) MADS-box transcription factor 26 (OsMADS26) (FDRMADS3)| (RMADS220) Length = 222 Score = 33.5 bits (75), Expect = 0.67 Identities = 15/38 (39%), Positives = 27/38 (71%) Frame = -1 Query: 679 HIRARKNQLMHESISELQKKERSLQEENKVLQKELVEK 566 +IR+ K Q+M + I L+ KE L+ N++LQ+++VE+ Sbjct: 136 NIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVEQ 173
>TT16_ARATH (Q8RYD9) TRANSPARENT TESTA 16 protein (Arabidopsis BSISTER MADS-box| protein) Length = 252 Score = 33.5 bits (75), Expect = 0.67 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVE 569 +R RKN+LM + + L +K R L+E+N + + L E Sbjct: 137 VRERKNELMQQQLENLSRKRRMLEEDNNNMYRWLHE 172
>AG_PETHY (Q40885) Floral homeotic protein AGAMOUS (pMADS3)| Length = 242 Score = 33.5 bits (75), Expect = 0.67 Identities = 14/39 (35%), Positives = 25/39 (64%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 IRA+KN+L+ I +QK+E L N+ L+ ++ E ++ Sbjct: 154 IRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETER 192
>ZIC2_XENLA (Q91689) Zinc finger protein ZIC 2 (Zinc finger protein of the| cerebellum 2) (Zinc finger DNA-binding protein fZic) Length = 501 Score = 33.1 bits (74), Expect = 0.87 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +1 Query: 487 HPSS*RKKKKSWFEAEFDLAAPPGPSASPQVPSG-ELYSPPAVTSPSSEAQ 636 HPSS RK K ++P G +SP SG E +PP + SP+SE Q Sbjct: 423 HPSSLRKHMK------VHESSPQGSESSPAASSGYESSTPPGLVSPNSETQ 467
>AP32_ASAEU (Q9LLA7) MADS-box protein AeAP3-2 (APETALA3-2) (Fragment)| Length = 210 Score = 33.1 bits (74), Expect = 0.87 Identities = 12/32 (37%), Positives = 23/32 (71%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQK 581 +R+RK QL+ + + L++KE L+E+N+ L + Sbjct: 110 VRSRKEQLLQQQLDNLRRKENMLEEQNRELYR 141
>ZIC2_HUMAN (O95409) Zinc finger protein ZIC 2 (Zinc finger protein of the| cerebellum 2) Length = 532 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +1 Query: 487 HPSS*RKKKKSWFEAEFDLAAPPGPSASPQVPSG-ELYSPPAVTSPSSEAQ 636 HPSS RK K ++P G +SP SG E +PP + SPS+E Q Sbjct: 404 HPSSLRKHMK------VHESSPQGSESSPAASSGYESSTPPGLVSPSAEPQ 448
>ZIC2_MOUSE (Q62520) Zinc finger protein ZIC 2 (Zinc finger protein of the| cerebellum 2) Length = 530 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +1 Query: 487 HPSS*RKKKKSWFEAEFDLAAPPGPSASPQVPSG-ELYSPPAVTSPSSEAQ 636 HPSS RK K ++P G +SP SG E +PP + SPS+E Q Sbjct: 404 HPSSLRKHMK------VHESSPQGSESSPAASSGYESSTPPGLVSPSAEPQ 448
>DEF21_ANTMA (Q8RVL4) MADS-box protein defh21 (DEFICIENS homolog 21)| Length = 247 Score = 32.3 bits (72), Expect = 1.5 Identities = 14/38 (36%), Positives = 25/38 (65%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQ 563 +RARK +L+HE + L++ E L++EN+ + L+ Q Sbjct: 142 VRARKLELLHEQMENLKRTEFMLEKENQEMYHWLMSNQ 179
>AG_TOBAC (Q43585) Floral homeotic protein AGAMOUS (NAG1)| Length = 248 Score = 32.3 bits (72), Expect = 1.5 Identities = 13/39 (33%), Positives = 25/39 (64%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 IR++KN+L+ I +QK+E L N+ L+ ++ E ++ Sbjct: 154 IRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETER 192
>AG_LYCES (Q40168) Floral homeotic protein AGAMOUS (TAG1)| Length = 248 Score = 32.3 bits (72), Expect = 1.5 Identities = 13/39 (33%), Positives = 25/39 (64%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 IR++KN+L+ I +QK+E L N+ L+ ++ E ++ Sbjct: 154 IRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETER 192
>FBP24_PETHY (Q9ATE5) MADS-box protein FBP24 (Floral binding protein 24)| Length = 268 Score = 32.3 bits (72), Expect = 1.5 Identities = 15/38 (39%), Positives = 25/38 (65%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQ 563 IRARK +LM + + L+K E+ L++EN + + L+ Q Sbjct: 139 IRARKLELMQQQMENLKKTEKMLEKENHDMYQWLMNNQ 176
>PO3F3_RAT (Q63262) POU domain, class 3, transcription factor 3| (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein) Length = 497 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/60 (35%), Positives = 28/60 (46%) Frame = -3 Query: 716 AATGAAAGKLTETYQSQEEPTYARIHF*ASEEGEVTAGGE*SSPEGTCGEAEGPGGAARS 537 AA AAA L Q+ P + ++ S+ G T G S+P G G G GG A+S Sbjct: 196 AAAAAAAAHLPSMAGGQQPPPQSLLY---SQPGGFTVNGMLSAPPGPGGGGGGAGGGAQS 252
>PO3F3_HUMAN (P20264) POU domain, class 3, transcription factor 3| (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein) Length = 500 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/60 (35%), Positives = 28/60 (46%) Frame = -3 Query: 716 AATGAAAGKLTETYQSQEEPTYARIHF*ASEEGEVTAGGE*SSPEGTCGEAEGPGGAARS 537 AA AAA L Q+ P + ++ S+ G T G S+P G G G GG A+S Sbjct: 197 AAAAAAAAHLPSMAGGQQPPPQSLLY---SQPGGFTVNGMLSAPPGPGGGGGGAGGGAQS 253
>PRGR_RABIT (P06186) Progesterone receptor (PR)| Length = 930 Score = 32.0 bits (71), Expect = 1.9 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = +1 Query: 532 EFDLAAPPGPSASPQVPSGELYSPPAVTSPSS 627 +F LAAPP PS P+VPS SP S Sbjct: 415 DFQLAAPPPPSLPPRVPSSRPGEAAVAASPGS 446
>AGL1_ARATH (P29381) Agamous-like MADS-box protein AGL1 (Protein Shatterproof| 1) Length = 248 Score = 32.0 bits (71), Expect = 1.9 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVE 569 +R++KN+L+ I +QK+E LQ N L+ ++ E Sbjct: 153 VRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAE 188
>PO3F3_MOUSE (P31361) POU domain, class 3, transcription factor 3| (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein) Length = 495 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/60 (35%), Positives = 28/60 (46%) Frame = -3 Query: 716 AATGAAAGKLTETYQSQEEPTYARIHF*ASEEGEVTAGGE*SSPEGTCGEAEGPGGAARS 537 AA AAA L Q+ P + ++ S+ G T G S+P G G G GG A+S Sbjct: 194 AAAAAAAAHLPSMAGGQQPPPQSLLY---SQPGGFTVNGMLSAPPGPGGGGGGAGGGAQS 250
>CK5P2_MOUSE (Q8K389) CDK5 regulatory subunit-associated protein 2 (CDK5| activator-binding protein C48) Length = 1822 Score = 31.6 bits (70), Expect = 2.5 Identities = 12/29 (41%), Positives = 24/29 (82%) Frame = -1 Query: 646 ESISELQKKERSLQEENKVLQKELVEKQK 560 ES+ +LQ + S++EEN+ LQ++++EK++ Sbjct: 1496 ESLEQLQLEYTSVREENERLQRDIIEKER 1524
>MYC_DROME (Q9W4S7) Myc protein (dMyc1) (dMyc) (Diminutive protein)| Length = 717 Score = 30.8 bits (68), Expect = 4.3 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 11/62 (17%) Frame = +3 Query: 57 VNYRNNTQEQRVSSKVENSSLMLHINYMVDYSYSHL-----------SPGGKETEVDEVK 203 + NN + + NS+ MLH+ ++ D+SY+ +P + E+D V Sbjct: 358 ITTNNNNSNNKNNKLKNNSNGMLHMMHITDHSYTRCNDMVDDGPNLETPSDSDEEIDVVS 417 Query: 204 YT 209 YT Sbjct: 418 YT 419
>TRIPB_HUMAN (Q15643) Thyroid receptor-interacting protein 11 (TRIP-11)| (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230) (Clonal evolution related gene on chromosome 14) Length = 1979 Score = 30.8 bits (68), Expect = 4.3 Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = -1 Query: 667 RKNQLMHESISELQKKERSLQEENKVLQKEL 575 RKN+++ ++I E + S++EEN LQ+EL Sbjct: 839 RKNEILRQTIEEKDRSLGSMKEENNHLQEEL 869
>ZIC1_XENLA (O73689) Zinc finger protein ZIC 1 (Zinc finger protein of the| cerebellum 1) (ZIC-related-1 protein) (ZIC-R1) (ODD-paired-like) Length = 443 Score = 30.4 bits (67), Expect = 5.7 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = +1 Query: 487 HPSS*RKKKKSWFEAEFDLAAPPGPSASPQVPSG-ELYSPPAVTSPSSEAQ 636 HPSS RK K A+ G SP SG E +PP + SPS+E Q Sbjct: 369 HPSSLRKHMK------VHEASSQGSQPSPAASSGYESSTPPTIVSPSAENQ 413
>CCD11_HUMAN (Q96M91) Coiled-coil domain-containing protein 11| Length = 399 Score = 30.4 bits (67), Expect = 5.7 Identities = 12/37 (32%), Positives = 23/37 (62%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVEK 566 + + Q+ HE+ ++ KK+++ QE +LQK L E+ Sbjct: 144 VESNNAQIKHENEQDMLKKQKAKQETRTILQKALQER 180
>ROCK1_PANTR (P61584) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (Fragment) Length = 1003 Score = 30.0 bits (66), Expect = 7.4 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -1 Query: 676 IRARKNQL-MHESISELQKKERSLQEENKVLQKELVEKQK 560 +R RK+ M +SIS+L+ R LQE N++L+ + K Sbjct: 211 VRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDK 250
>KIFC1_HUMAN (Q9BW19) Kinesin-like protein KIFC1 (Kinesin-like protein 2)| (Kinesin-related protein HSET) Length = 673 Score = 30.0 bits (66), Expect = 7.4 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = -1 Query: 640 ISELQKKERSLQEENKVLQKELVEKQK 560 + ELQKK+ LQEE + L +L EK++ Sbjct: 227 VQELQKKQVELQEERRGLMSQLEEKER 253
>PALA_DEBHA (Q6BLT2) pH-response regulator protein palA/RIM20| Length = 766 Score = 30.0 bits (66), Expect = 7.4 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = -1 Query: 676 IRARKNQLMHESISELQKKERSLQEENKVLQKELVE 569 I+AR N ++ I +KK+R L EEN + + E Sbjct: 581 IKARNNNILPSIIDSFKKKQRKLYEENAAIDERSFE 616
>FOSL2_CHICK (P18625) Fos-related antigen 2| Length = 323 Score = 30.0 bits (66), Expect = 7.4 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 8/49 (16%) Frame = -1 Query: 682 KHIRARKNQLM--------HESISELQKKERSLQEENKVLQKELVEKQK 560 + IR +N+L E +LQ + L+EE VLQKE+ E QK Sbjct: 127 RRIRRERNKLAAAKCRNRRRELTEKLQAETEVLEEEKSVLQKEIAELQK 175
>VGP3_EBVP3 (P68344) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 30.0 bits (66), Expect = 7.4 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +1 Query: 526 EAEFDLAAPPGPSASPQVPSGELYSPPAVTSPSSEA 633 E PP + SPQ PSG+ + P VTS +A Sbjct: 723 EVNVTKGTPPKNATSPQAPSGQKTAVPTVTSTGGKA 758
>VGP3_EBVA8 (P68343) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 30.0 bits (66), Expect = 7.4 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +1 Query: 526 EAEFDLAAPPGPSASPQVPSGELYSPPAVTSPSSEA 633 E PP + SPQ PSG+ + P VTS +A Sbjct: 723 EVNVTKGTPPKNATSPQAPSGQKTAVPTVTSTGGKA 758
>ROCK1_RABIT (O77819) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (cAMP-dependent protein kinase ROCK-I) (CePKA) (Corneal epithelial Rho-associated-Ser/Thr kinase 1) (HEB Length = 1354 Score = 30.0 bits (66), Expect = 7.4 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -1 Query: 676 IRARKNQL-MHESISELQKKERSLQEENKVLQKELVEKQK 560 +R RK+ M +SIS+L+ R LQE N++L+ + K Sbjct: 562 VRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDK 601
>ROCK1_MOUSE (P70335) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) Length = 1354 Score = 30.0 bits (66), Expect = 7.4 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -1 Query: 676 IRARKNQL-MHESISELQKKERSLQEENKVLQKELVEKQK 560 +R RK+ M +SIS+L+ R LQE N++L+ + K Sbjct: 562 VRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQADK 601
>ROCK1_HUMAN (Q13464) Rho-associated protein kinase 1 (EC 2.7.11.1)| (Rho-associated, coiled-coil-containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (NY-REN-35 antigen) Length = 1354 Score = 30.0 bits (66), Expect = 7.4 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -1 Query: 676 IRARKNQL-MHESISELQKKERSLQEENKVLQKELVEKQK 560 +R RK+ M +SIS+L+ R LQE N++L+ + K Sbjct: 562 VRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDK 601
>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)| Length = 907 Score = 30.0 bits (66), Expect = 7.4 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +1 Query: 526 EAEFDLAAPPGPSASPQVPSGELYSPPAVTSPSSEA 633 E PP + SPQ PSG+ + P VTS +A Sbjct: 744 EVNVTKGTPPQNATSPQAPSGQKTAVPTVTSTGGKA 779
>INCE_HUMAN (Q9NQS7) Inner centromere protein| Length = 923 Score = 30.0 bits (66), Expect = 7.4 Identities = 14/36 (38%), Positives = 26/36 (72%) Frame = -1 Query: 667 RKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 R+ Q ++ ELQ++E++L+ + + LQ+EL EK+K Sbjct: 730 RREQERLQAERELQEREKALRLQKEQLQRELEEKKK 765
>TPR_HUMAN (P12270) Nucleoprotein TPR| Length = 2349 Score = 30.0 bits (66), Expect = 7.4 Identities = 12/40 (30%), Positives = 27/40 (67%) Frame = -1 Query: 682 KHIRARKNQLMHESISELQKKERSLQEENKVLQKELVEKQ 563 +H+ ++ Q + E++++ + K +SL+ + + LQK L EK+ Sbjct: 1469 QHVSVQEMQELKETLNQAETKSKSLESQVENLQKTLSEKE 1508
>AP3D1_MOUSE (O54774) AP-3 complex subunit delta-1 (Adapter-related protein| complex 3 delta-1 subunit) (Delta-adaptin 3) (AP-3 complex delta subunit) (Delta-adaptin) (mBLVR1) Length = 1199 Score = 29.6 bits (65), Expect = 9.7 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +1 Query: 505 KKKKSWFEAEFDLAAPPGPSASP-QVPSGELYSPPAVTSPSSEAQ 636 KK K + +F L+ P P+A+P PS E + +TSP E + Sbjct: 855 KKDKKGEDLDFWLSTTPPPAAAPIPAPSTEELAASTITSPKDECE 899
>TPR1_SCHPO (O42668) Tetratricopeptide repeat protein 1| Length = 1039 Score = 29.6 bits (65), Expect = 9.7 Identities = 14/38 (36%), Positives = 25/38 (65%) Frame = -1 Query: 673 RARKNQLMHESISELQKKERSLQEENKVLQKELVEKQK 560 +AR+ + E Q++ER LQEE + +Q+E++E +K Sbjct: 882 KARRLAEEEALLKEKQERERQLQEERQKMQEEVLEWRK 919 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 97,882,633 Number of Sequences: 219361 Number of extensions: 2041779 Number of successful extensions: 6968 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 6286 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6944 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7309604013 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
