>UAP1_ARATH (O64765) Probable UDP-N-acetylglucosamine pyrophosphorylase (EC|
           2.7.7.23)
          Length = 502

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 38/42 (90%), Positives = 38/42 (90%)
 Frame = -2

Query: 352 FLTHSVPLYMTGVEVSPLSSYAGENLXAICRGRTFHAPSEIS 227
           FLTHSVPLY TGVEVSPL SYAGENL AICRGRTFHAP EIS
Sbjct: 460 FLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHAPCEIS 501

>UAP1_HUMAN (Q16222) UDP-N-acetylhexosamine pyrophosphorylase (Antigen X) (AGX)|
           (Sperm-associated antigen 2) [Includes:
           UDP-N-acetylgalactosamine pyrophosphorylase (EC 2.7.7.-)
           (AGX-1); UDP-N-acetylglucosamine pyrophosphorylase (EC
           2.7.7.23) (AGX-2)]
          Length = 522

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -2

Query: 313 EVSPLSSYAGENLXAICRGRTFHAP 239
           E+SPL SYAGE L +    + FHAP
Sbjct: 482 EISPLISYAGEGLESYVADKEFHAP 506

>UAP1_MOUSE (Q91YN5) UDP-N-acetylhexosamine pyrophosphorylase [Includes:|
           UDP-N-acetylgalactosamine pyrophosphorylase (EC
           2.7.7.-); UDP-N-acetylglucosamine pyrophosphorylase (EC
           2.7.7.23)]
          Length = 522

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 313 EVSPLSSYAGENLXAICRGRTFHAP 239
           E+SPL SYAGE L      + FHAP
Sbjct: 482 EISPLISYAGEGLEGYVADKEFHAP 506

>M550_ARATH (P93310) Hypothetical mitochondrial protein AtMg00550 (ORF160)|
          Length = 196

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 115 IHQCPKPPSQTVR-HPFGLAIPVQXCFFLP 201
           + QCPK   ++V+   F L +P+Q CF  P
Sbjct: 153 VKQCPKDKEKSVKCRKFALPLPLQACFHFP 182

>Y1459_MYCBO (P64852) Hypothetical protein Mb1459c|
          Length = 253

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
 Frame = +2

Query: 95  SSKSSAQYTNVPNHH---------PKL*GIRSALRSLCNXASSCRYDEPMRLER---DLA 238
           S+++SA+  + P++          P L GI + L S C  AS+  Y+EP   +R    L 
Sbjct: 27  SAQTSARRYSFPSYRRPPAEKLVFPVLLGILTLLLSACQTASASGYNEPRGYDRATLKLV 86

Query: 239 GSVECPSAADRLQVFSGVGAERRNLDAC 322
            S++     +R    S +   R  + AC
Sbjct: 87  FSMDLGMCLNRFTYDSKLAPSRPQVVAC 114

>Y1424_MYCTU (P64851) Hypothetical protein Rv1424c/MT1467|
          Length = 253

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
 Frame = +2

Query: 95  SSKSSAQYTNVPNHH---------PKL*GIRSALRSLCNXASSCRYDEPMRLER---DLA 238
           S+++SA+  + P++          P L GI + L S C  AS+  Y+EP   +R    L 
Sbjct: 27  SAQTSARRYSFPSYRRPPAEKLVFPVLLGILTLLLSACQTASASGYNEPRGYDRATLKLV 86

Query: 239 GSVECPSAADRLQVFSGVGAERRNLDAC 322
            S++     +R    S +   R  + AC
Sbjct: 87  FSMDLGMCLNRFTYDSKLAPSRPQVVAC 114

>ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing protein ZFN-like 4|
          Length = 404

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 176 LCNXASSCRYDEPMRLERDLA 238
           LC   SSCRY+ P  L +D+A
Sbjct: 61  LCGYGSSCRYNHPTHLPQDVA 81

>Y1583_PASMU (Q9CKM8) Hypothetical protein PM1583 precursor|
          Length = 204

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +2

Query: 71  VPENPNADSSK--SSAQYTNVPNHHPKL*GI 157
           +P NPN D  K  +SA + NV N H +  G+
Sbjct: 152 IPANPNVDGEKITASAPFMNVINEHVRAKGV 182

>SP110_HUMAN (Q9HB58) Sp110 nuclear body protein (Speckled 110 kDa)|
           (Transcriptional coactivator Sp110) (Interferon-induced
           protein 41/75)
          Length = 689

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/52 (25%), Positives = 30/52 (57%)
 Frame = +3

Query: 27  RIWANYSQKIQQSGLYLKTLMPIAQRAQLNTPMSQTTIPNCEASVRPCDPCA 182
           R+ A+Y ++ + + + L+    +A+ + L+TP++   +P+ +     C PCA
Sbjct: 105 RVGASYERQSRDTPILLEAPTGLAEGSSLHTPLA---LPHHKPPQPSCSPCA 153

>LRP1_HUMAN (Q07954) Low-density lipoprotein receptor-related protein 1 precursor|
            (LRP) (Alpha-2-macroglobulin receptor) (A2MR)
            (Apolipoprotein E receptor) (APOER) (CD91 antigen)
          Length = 4544

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 6/34 (17%)
 Frame = -1

Query: 179  TGIARPNGCLTVWDGGLGHWC------IELSSLS 96
            TG++ P+G    W GG  +WC      IE+S L+
Sbjct: 3099 TGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLN 3132

>LRP1_CHICK (P98157) Low-density lipoprotein receptor-related protein 1 precursor|
            (LRP) (Alpha-2-macroglobulin receptor) (A2MR)
          Length = 4543

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 6/34 (17%)
 Frame = -1

Query: 179  TGIARPNGCLTVWDGGLGHWC------IELSSLS 96
            TG++ P+G    W GG  +WC      IE+S L+
Sbjct: 3096 TGLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLN 3129

>ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing protein ZFN3|
          Length = 375

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +2

Query: 176 LCNXASSCRYDEPMRLERDLAGSVECPSAADRLQVFSGVGAERRNL 313
           +C    SC++D PMR+      +   PS +  L   + +  E RNL
Sbjct: 303 ICKFGPSCKFDHPMRV-FTYNNNTASPSPSSSLHQETAITTELRNL 347

>LE14B_PRUAR (O24467) LEC14B homolog|
          Length = 475

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
 Frame = -1

Query: 233 DLVLGASV----HHSGRKKXCCTGIARPNGCLTVWDGGLGHW 120
           DLV GA V    HH G  + C      P    + WDG +  W
Sbjct: 411 DLVTGAQVARLNHHEGPVRDCSWHPLYPMLVSSSWDGTIARW 452

>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog|
          Length = 1849

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +2

Query: 128  PNHHPKL*GIRSALRSLCNXASSCRYDEPMRLERDLAGS 244
            PN  P L  I+S+++++C  + S +++EP+       GS
Sbjct: 971  PNLIPSLSPIKSSVKTICKKSPSEKFEEPVTSPEKTLGS 1009

>NU133_CAEEL (P34343) Nuclear pore complex protein 15 (Nucleoporin npp-15)|
          Length = 1127

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -1

Query: 266 LPRTDIPRSQRDLVLGASVHHSGRKKXCCTGI--ARPNGCLTVW 141
           LP + +PRS + +V+   VH  G  K  C GI    P G L  W
Sbjct: 79  LPTSGLPRSVKCVVVYDGVHR-GANKTPCPGILVVSPEGVLRHW 121

>QORH_SPIOL (Q8H0M1) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-)|
           (ceQORH)
          Length = 329

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -1

Query: 167 RPNGCLTVWDGGLGHWCIELSSLSYRH*GFQVQARLLYLL*VIGPD 30
           R N  +T   GG+GH+ ++L+ L   H      AR L  +  +G D
Sbjct: 156 RKNILITAASGGVGHYAVQLAKLGNTHVTATCGARNLDFVKGLGAD 201

>FMC1_ECOLI (P02971) CFA/I fimbrial subunit B precursor (Colonization factor|
           antigen I subunit B) (CFA/I pilin) (CFA/I antigen)
          Length = 170

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -3

Query: 159 RMPHSLGWWFGTLVY*AELFELSALGFSGTGQTVVS 52
           +MP S+ W    L   A+ FE +ALG+S +G   VS
Sbjct: 100 QMPISVSWGGQVLSTTAKEFEAAALGYSASGVNGVS 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,385,641
Number of Sequences: 219361
Number of extensions: 1037754
Number of successful extensions: 2953
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2953
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)