| Clone Name | rbaal35j19 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 210 bits (535), Expect(2) = 1e-73 Identities = 103/103 (100%), Positives = 103/103 (100%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL Sbjct: 325 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 384 Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG Sbjct: 385 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427 Score = 86.3 bits (212), Expect(2) = 1e-73 Identities = 38/38 (100%), Positives = 38/38 (100%) Frame = -2 Query: 228 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 115 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 170 bits (431), Expect(2) = 8e-56 Identities = 80/103 (77%), Positives = 92/103 (89%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 DTFPGQSIDFFGALRARVY DEVRKWV G++ IGK+LVNS++GP +FEQPKMT++KLL Sbjct: 335 DTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLL 394 Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276 YG MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K G+FYG Sbjct: 395 GYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437 Score = 66.6 bits (161), Expect(2) = 8e-56 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%) Frame = -2 Query: 231 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 115 GG+ AQQ G +PVPEGCTD A NYDPTARSDDGSC+Y F Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 167 bits (423), Expect(2) = 3e-55 Identities = 81/103 (78%), Positives = 92/103 (89%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 D FPGQSIDFFGALRARVYDDEVRK+V S G+E IGKRLVNSR+GP FEQP+MT EKL+ Sbjct: 335 DQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLM 394 Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276 EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+ G+FYG Sbjct: 395 EYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437 Score = 67.8 bits (164), Expect(2) = 3e-55 Identities = 29/38 (76%), Positives = 33/38 (86%) Frame = -2 Query: 228 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 115 GKGAQQ LPVPEGCTD A+N+DPTARSDDG+C+Y F Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 169 bits (429), Expect(2) = 8e-55 Identities = 78/103 (75%), Positives = 93/103 (90%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 D FPGQSIDFFGALRARVY DEVRKWV S G++N+GK+LVNS+DGP FEQP+MT++KL+ Sbjct: 333 DAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLM 392 Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276 EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+ G+F+G Sbjct: 393 EYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435 Score = 63.9 bits (154), Expect(2) = 8e-55 Identities = 28/36 (77%), Positives = 30/36 (83%) Frame = -2 Query: 228 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 121 GK AQQ +LPV +GCTD AKNYDPTARSDDGSC Y Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 186 bits (472), Expect = 4e-47 Identities = 87/103 (84%), Positives = 96/103 (93%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 DTFPGQSIDFFGALRARVYDDEVRKWVG G+ENI KRLVNSR+GP TF+QPKMT+EKL+ Sbjct: 322 DTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLM 381 Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276 EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYG Sbjct: 382 EYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 184 bits (466), Expect = 2e-46 Identities = 86/103 (83%), Positives = 97/103 (94%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 D+FPGQSIDFFGALRARVYDDEVRKWV TG+ENIGKRLVNSR+GP FEQPKMT+EKL+ Sbjct: 325 DSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLI 384 Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276 EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGSFYG Sbjct: 385 EYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 179 bits (455), Expect = 4e-45 Identities = 83/103 (80%), Positives = 96/103 (93%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 DTFPGQSIDFFGALRARVYDDEVRKW+ G+++IGK+LVNS++GP TFEQPKMT+EKLL Sbjct: 335 DTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLL 394 Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276 EYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+FYG Sbjct: 395 EYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 177 bits (449), Expect = 2e-44 Identities = 81/102 (79%), Positives = 96/102 (94%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 DTFPGQSIDFFGALRARVYDDEVR+WV TG+ENI ++LVNS++GP TFEQPK+T+EKLL Sbjct: 331 DTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLL 390 Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 279 EYGHMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGSF+ Sbjct: 391 EYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 172 bits (435), Expect = 8e-43 Identities = 83/101 (82%), Positives = 92/101 (91%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 DTFPGQSIDFFGALRARVYDDEVRKWV TGIE IG +L+NS DGP TFEQPKMTVEKLL Sbjct: 339 DTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLL 398 Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 282 EYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+F Sbjct: 399 EYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 171 bits (432), Expect = 2e-42 Identities = 79/101 (78%), Positives = 93/101 (92%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 D FPGQSIDFFGALRARVYDDEVRKWV G++ IGK+LVNS++GP TFEQPKMT++KLL Sbjct: 335 DQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLL 394 Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 282 +YG+MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K G+F Sbjct: 395 QYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 170 bits (430), Expect = 3e-42 Identities = 81/102 (79%), Positives = 90/102 (88%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 D FPGQSIDFFGALRARVYDDEVRKWV TGIE IG +L+NS DGP TFEQPKMT+EKLL Sbjct: 339 DNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLL 398 Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 279 EYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+ GSF+ Sbjct: 399 EYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 170 bits (430), Expect = 3e-42 Identities = 81/99 (81%), Positives = 92/99 (92%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 D+FPGQSIDFFGALRARVYDDEVRKWV TGIE IG++L+NSRDGP TFEQPKMT+EKLL Sbjct: 334 DSFPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLL 393 Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 288 EYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG Sbjct: 394 EYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 165 bits (418), Expect = 8e-41 Identities = 74/102 (72%), Positives = 95/102 (93%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 DTFPGQSIDFFGALRARVYDDEVRKW+ G++ GK+LVNS++GP TF+QPKM+++KLL Sbjct: 337 DTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLL 396 Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 279 +YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+ Sbjct: 397 QYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 159 bits (403), Expect = 4e-39 Identities = 72/102 (70%), Positives = 92/102 (90%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 D PGQSIDFFGALRARVYDDEVRKW+ G++++GK+LVNS++GP TF+QPKMT++KLL Sbjct: 339 DKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLL 398 Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 279 Y MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+ Sbjct: 399 LYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 130 bits (326), Expect = 4e-30 Identities = 60/78 (76%), Positives = 69/78 (88%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 DTFPGQSIDFFGALRARVYDDEVRKW G+E IG+ LVNS++ P TF+QPKMT+EKLL Sbjct: 332 DTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLL 391 Query: 404 EYGHMLVQEQDNVKRVQL 351 EYG+MLV EQ+NVKRV+L Sbjct: 392 EYGNMLVMEQENVKRVKL 409
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 108 bits (271), Expect = 9e-24 Identities = 54/88 (61%), Positives = 67/88 (76%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 DTFPGQSIDFFGALRARVYDD VR+W+ TG++ IG++LVN+R V + M + L+ Sbjct: 308 DTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLI 366 Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAAL 321 +YG LV EQ+NVKRVQLAD Y+S A L Sbjct: 367 KYGKSLVDEQENVKRVQLADAYLSGAEL 394
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 86.3 bits (212), Expect = 6e-17 Identities = 37/82 (45%), Positives = 56/82 (68%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 D+FP QSIDFF ALR+R+YD+++R ++ G EN+ R+VNS +GP F++P T+ L+ Sbjct: 208 DSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLI 267 Query: 404 EYGHMLVQEQDNVKRVQLADTY 339 E + +V EQ ++ QL D Y Sbjct: 268 ESANFMVAEQKRIETSQLVDEY 289
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 80.5 bits (197), Expect = 3e-15 Identities = 37/82 (45%), Positives = 54/82 (65%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405 DTFP QSIDFF ALR+R+YD ++R ++ G E I R+VNS + P F++P ++ L+ Sbjct: 208 DTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLI 267 Query: 404 EYGHMLVQEQDNVKRVQLADTY 339 E G++++ EQ V QL D Y Sbjct: 268 ESGNLVLGEQQRVDNSQLVDEY 289
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 44.7 bits (104), Expect = 2e-04 Identities = 26/58 (44%), Positives = 28/58 (48%) Frame = -3 Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 411 DTFPGQSIDFFGAL R+GP TFEQP MT+EK Sbjct: 3 DTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32
>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)| (EF-1AO) (42S p48) Length = 461 Score = 31.6 bits (70), Expect = 1.8 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%) Frame = -3 Query: 446 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 291 VTF +T E K +E H +QE NVK + + D A N M+ Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337 Query: 290 GSFYG*KILHTHPPSLAA 237 GSF I+ HP ++A Sbjct: 338 GSFTAQVIILNHPGQISA 355
>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)| Length = 464 Score = 30.0 bits (66), Expect = 5.1 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%) Frame = -3 Query: 446 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 291 VTF +T E K +E H +QE NVK + + D A N A +T Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337 Query: 290 GSFYG*KILHTHPPSLAA 237 F I+ HP ++A Sbjct: 338 KMFTAQVIIMNHPGQISA 355
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor| Length = 1346 Score = 30.0 bits (66), Expect = 5.1 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +1 Query: 343 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 447 + +SC+R TL T CP SS +TVI+ C ++ Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453
>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor| Length = 521 Score = 29.6 bits (65), Expect = 6.7 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = -3 Query: 509 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 402 W+GS I+ G+RL++SRD +T E P++ ++ LLE Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257
>EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF-1-alpha-S)| Length = 462 Score = 29.3 bits (64), Expect = 8.7 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 8/78 (10%) Frame = -3 Query: 446 VTFEQPKMTVE-KLLEYGHMLVQEQD-------NVKRVQLADTYMSQAALGDANQDAMKT 291 VTF +T E K +E H + E NVK V + D A N M+ Sbjct: 278 VTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 337 Query: 290 GSFYG*KILHTHPPSLAA 237 GSF I+ HP + A Sbjct: 338 GSFTAQVIILNHPGQIGA 355 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,818,598 Number of Sequences: 219361 Number of extensions: 1707415 Number of successful extensions: 5141 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 4978 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5139 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)