ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal35j19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ... 210 1e-73
2RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ... 170 8e-56
3RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a... 167 3e-55
4RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a... 169 8e-55
5RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ... 186 4e-47
6RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a... 184 2e-46
7RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a... 179 4e-45
8RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a... 177 2e-44
9RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ... 172 8e-43
10RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ... 171 2e-42
11RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ... 170 3e-42
12RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a... 170 3e-42
13RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a... 165 8e-41
14RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a... 159 4e-39
15RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a... 130 4e-30
16RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a... 108 9e-24
17RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a... 86 6e-17
18RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a... 80 3e-15
19RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase a... 45 2e-04
20EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-... 32 1.8
21EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha) 30 5.1
22GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 pre... 30 5.1
23LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 p... 30 6.7
24EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF... 29 8.7

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  210 bits (535), Expect(2) = 1e-73
 Identities = 103/103 (100%), Positives = 103/103 (100%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL
Sbjct: 325 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 384

Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276
           EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG
Sbjct: 385 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427



 Score = 86.3 bits (212), Expect(2) = 1e-73
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -2

Query: 228 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 115
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464



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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  170 bits (431), Expect(2) = 8e-56
 Identities = 80/103 (77%), Positives = 92/103 (89%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           DTFPGQSIDFFGALRARVY DEVRKWV   G++ IGK+LVNS++GP +FEQPKMT++KLL
Sbjct: 335 DTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLL 394

Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276
            YG MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K G+FYG
Sbjct: 395 GYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437



 Score = 66.6 bits (161), Expect(2) = 8e-56
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -2

Query: 231 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 115
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476



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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  167 bits (423), Expect(2) = 3e-55
 Identities = 81/103 (78%), Positives = 92/103 (89%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           D FPGQSIDFFGALRARVYDDEVRK+V S G+E IGKRLVNSR+GP  FEQP+MT EKL+
Sbjct: 335 DQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLM 394

Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276
           EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+  G+FYG
Sbjct: 395 EYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437



 Score = 67.8 bits (164), Expect(2) = 3e-55
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -2

Query: 228 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 115
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474



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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  169 bits (429), Expect(2) = 8e-55
 Identities = 78/103 (75%), Positives = 93/103 (90%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           D FPGQSIDFFGALRARVY DEVRKWV S G++N+GK+LVNS+DGP  FEQP+MT++KL+
Sbjct: 333 DAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLM 392

Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276
           EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+  G+F+G
Sbjct: 393 EYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435



 Score = 63.9 bits (154), Expect(2) = 8e-55
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -2

Query: 228 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 121
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470



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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  186 bits (472), Expect = 4e-47
 Identities = 87/103 (84%), Positives = 96/103 (93%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           DTFPGQSIDFFGALRARVYDDEVRKWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+
Sbjct: 322 DTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLM 381

Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276
           EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYG
Sbjct: 382 EYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424



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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  184 bits (466), Expect = 2e-46
 Identities = 86/103 (83%), Positives = 97/103 (94%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           D+FPGQSIDFFGALRARVYDDEVRKWV  TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+
Sbjct: 325 DSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLI 384

Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276
           EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 385 EYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427



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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  179 bits (455), Expect = 4e-45
 Identities = 83/103 (80%), Positives = 96/103 (93%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           DTFPGQSIDFFGALRARVYDDEVRKW+   G+++IGK+LVNS++GP TFEQPKMT+EKLL
Sbjct: 335 DTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLL 394

Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 276
           EYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 395 EYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437



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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  177 bits (449), Expect = 2e-44
 Identities = 81/102 (79%), Positives = 96/102 (94%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           DTFPGQSIDFFGALRARVYDDEVR+WV  TG+ENI ++LVNS++GP TFEQPK+T+EKLL
Sbjct: 331 DTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLL 390

Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 279
           EYGHMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 391 EYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432



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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  172 bits (435), Expect = 8e-43
 Identities = 83/101 (82%), Positives = 92/101 (91%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           DTFPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMTVEKLL
Sbjct: 339 DTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLL 398

Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 282
           EYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 399 EYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439



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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  171 bits (432), Expect = 2e-42
 Identities = 79/101 (78%), Positives = 93/101 (92%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           D FPGQSIDFFGALRARVYDDEVRKWV   G++ IGK+LVNS++GP TFEQPKMT++KLL
Sbjct: 335 DQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLL 394

Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 282
           +YG+MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K G+F
Sbjct: 395 QYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435



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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  170 bits (430), Expect = 3e-42
 Identities = 81/102 (79%), Positives = 90/102 (88%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           D FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMT+EKLL
Sbjct: 339 DNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLL 398

Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 279
           EYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 399 EYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440



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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  170 bits (430), Expect = 3e-42
 Identities = 81/99 (81%), Positives = 92/99 (92%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           D+FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLL
Sbjct: 334 DSFPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLL 393

Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 288
           EYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 394 EYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432



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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  165 bits (418), Expect = 8e-41
 Identities = 74/102 (72%), Positives = 95/102 (93%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           DTFPGQSIDFFGALRARVYDDEVRKW+   G++  GK+LVNS++GP TF+QPKM+++KLL
Sbjct: 337 DTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLL 396

Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 279
           +YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 397 QYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438



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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  159 bits (403), Expect = 4e-39
 Identities = 72/102 (70%), Positives = 92/102 (90%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           D  PGQSIDFFGALRARVYDDEVRKW+   G++++GK+LVNS++GP TF+QPKMT++KLL
Sbjct: 339 DKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLL 398

Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 279
            Y  MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 399 LYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440



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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  130 bits (326), Expect = 4e-30
 Identities = 60/78 (76%), Positives = 69/78 (88%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           DTFPGQSIDFFGALRARVYDDEVRKW    G+E IG+ LVNS++ P TF+QPKMT+EKLL
Sbjct: 332 DTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLL 391

Query: 404 EYGHMLVQEQDNVKRVQL 351
           EYG+MLV EQ+NVKRV+L
Sbjct: 392 EYGNMLVMEQENVKRVKL 409



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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  108 bits (271), Expect = 9e-24
 Identities = 54/88 (61%), Positives = 67/88 (76%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           DTFPGQSIDFFGALRARVYDD VR+W+  TG++ IG++LVN+R   V   +  M +  L+
Sbjct: 308 DTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLI 366

Query: 404 EYGHMLVQEQDNVKRVQLADTYMSQAAL 321
           +YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 367 KYGKSLVDEQENVKRVQLADAYLSGAEL 394



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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 37/82 (45%), Positives = 56/82 (68%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           D+FP QSIDFF ALR+R+YD+++R ++   G EN+  R+VNS +GP  F++P  T+  L+
Sbjct: 208 DSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLI 267

Query: 404 EYGHMLVQEQDNVKRVQLADTY 339
           E  + +V EQ  ++  QL D Y
Sbjct: 268 ESANFMVAEQKRIETSQLVDEY 289



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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 37/82 (45%), Positives = 54/82 (65%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLL 405
           DTFP QSIDFF ALR+R+YD ++R ++   G E I  R+VNS + P  F++P  ++  L+
Sbjct: 208 DTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLI 267

Query: 404 EYGHMLVQEQDNVKRVQLADTY 339
           E G++++ EQ  V   QL D Y
Sbjct: 268 ESGNLVLGEQQRVDNSQLVDEY 289



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>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 26/58 (44%), Positives = 28/58 (48%)
 Frame = -3

Query: 584 DTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 411
           DTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 3   DTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32



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>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -3

Query: 446 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 291
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 290 GSFYG*KILHTHPPSLAA 237
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355



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>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -3

Query: 446 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 291
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 290 GSFYG*KILHTHPPSLAA 237
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355



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>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 343 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 447
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453



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>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -3

Query: 509 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 402
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257



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>EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF-1-alpha-S)|
          Length = 462

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
 Frame = -3

Query: 446 VTFEQPKMTVE-KLLEYGHMLVQEQD-------NVKRVQLADTYMSQAALGDANQDAMKT 291
           VTF    +T E K +E  H  + E         NVK V + D      A    N   M+ 
Sbjct: 278 VTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 337

Query: 290 GSFYG*KILHTHPPSLAA 237
           GSF    I+  HP  + A
Sbjct: 338 GSFTAQVIILNHPGQIGA 355


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,818,598
Number of Sequences: 219361
Number of extensions: 1707415
Number of successful extensions: 5141
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5139
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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