ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal35j01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N21, full insert sequence Length = 2398 Score = 335 bits (169), Expect = 1e-88 Identities = 337/393 (85%) Strand = Plus / Minus Query: 197 agatttctacgatacggtacgcccataacatactgaagcaaggtagagattcttggacca 256 ||||||||| ||||| ||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 2081 agatttctaggatacagtacgtccatagcatactgatgcaaggtagagattcttggacca 2022 Query: 257 tttctccttcacatgctgactggggaaagcagatgttctcagtgtctcttgagtttcatc 316 ||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 2021 tttctccttgacatgttgactagggaaagcagatgttctcagcgtctcttgagtttcatc 1962 Query: 317 ggtaggcttccttcttggtacacttaagatcagtgcagtctgatcccaagtcgcagcaac 376 ||||||||||||||||| || ||||| | | ||||| ||||||||| || |||||| Sbjct: 1961 tgtaggcttccttcttgggacgcttaaaacgaatgcagcctgatcccaggttgcagcagt 1902 Query: 377 tgctgttatccggtaaccactgtcccacctcttatggactccctcactagggtacaagaa 436 ||| ||||||||||||||| ||||||| |||| || | ||||||||| ||||| | ||| Sbjct: 1901 tgcagttatccggtaaccattgtcccatctctggtgaattccctcactggggtataggaa 1842 Query: 437 gtccagctcaacaacctgttcggaaaaccctgcattgcgagacataacaaccgcccattt 496 |||||| || |||||||| || ||||| || ||||| || ||||||||||| |||||| | Sbjct: 1841 gtccagttcgacaacctgatcagaaaatccagcattacgcgacataacaactgcccatct 1782 Query: 497 ctttccagcagttgccatggaagtcacatagaaattatcacgccatttcttgtttatcca 556 ||||||| |||||||||||||||||||| ||| || | ||||| |||||||||||| Sbjct: 1781 acttccagctgttgccatggaagtcacataaaaaccgtccctccattccttgtttatcca 1722 Query: 557 cttgaagggaaaggtatcacttactttatagga 589 ||||| || || |||||||||||||| ||||| Sbjct: 1721 tttgaaagggaaagtatcacttactttgtagga 1689
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 163 bits (82), Expect = 8e-37 Identities = 166/194 (85%) Strand = Plus / Plus Query: 262 ccttcacatgctgactggggaaagcagatgttctcagtgtctcttgagtttcatcggtag 321 |||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 31105045 ccttgacatgttgactagggaaagcagatgttctcagcgtctcttgagtttcatctgtag 31105104 Query: 322 gcttccttcttggtacacttaagatcagtgcagtctgatcccaagtcgcagcaactgctg 381 ||||||||||||| || ||||| | | ||||| ||||||||| || |||||| ||| | Sbjct: 31105105 gcttccttcttgggacgcttaaaacgaatgcagcctgatcccaggttgcagcagttgcag 31105164 Query: 382 ttatccggtaaccactgtcccacctcttatggactccctcactagggtacaagaagtcca 441 |||||||||||||| ||||||| |||| || | ||||||||| ||||| | |||||||| Sbjct: 31105165 ttatccggtaaccattgtcccatctctggtgaattccctcactggggtataggaagtcca 31105224 Query: 442 gctcaacaacctgt 455 | || ||||||||| Sbjct: 31105225 gttcgacaacctgt 31105238 Score = 103 bits (52), Expect = 7e-19 Identities = 118/140 (84%) Strand = Plus / Plus Query: 450 acctgttcggaaaaccctgcattgcgagacataacaaccgcccatttctttccagcagtt 509 ||||| || ||||| || ||||| || ||||||||||| |||||| | ||||||| ||| Sbjct: 31105311 acctgatcagaaaatccagcattacgcgacataacaactgcccatctacttccagctgtt 31105370 Query: 510 gccatggaagtcacatagaaattatcacgccatttcttgtttatccacttgaagggaaag 569 ||||||||||||||||| ||| || | |||||||||||||||||| ||||| || || Sbjct: 31105371 gccatggaagtcacataaaaaccgtccctccatttcttgtttatccatttgaaagggaaa 31105430 Query: 570 gtatcacttactttatagga 589 |||||||||||||| ||||| Sbjct: 31105431 gtatcacttactttgtagga 31105450 Score = 95.6 bits (48), Expect = 2e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 197 agatttctacgatacggtacgcccataacatactgaagcaaggtagagattcttggacca 256 ||||||||| ||||| ||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 31104892 agatttctaggatacagtacgtccatagcatactgatgcaaggtagagattcttggacca 31104951 Query: 257 tttctcct 264 |||||||| Sbjct: 31104952 tttctcct 31104959 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 282 aaagcagatgttctcagtgtctcttgagtttcatcggtaggcttccttcttggta 336 ||||||||||||||||||||||| || ||||||||| ||||||| ||||| |||| Sbjct: 5328319 aaagcagatgttctcagtgtctcctgtgtttcatcgttaggctttcttctaggta 5328373 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 546 ttgtttatccacttgaagggaaaggtatcacttactttataggactgctg 595 ||||||||||| ||||||||||| | |||||||||||| ||||| ||||| Sbjct: 5328705 ttgtttatccatttgaagggaaatgaatcacttactttgtaggattgctg 5328754 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 539 ccatttcttgtttatccacttgaagggaaaggtatcacttactttataggactgctgagt 598 |||||||||||| ||||| ||||||||||| | ||||| ||||| || ||||| ||||| Sbjct: 32614723 ccatttcttgttgatccatttgaagggaaacgattcactaactttgtaagactgttgagt 32614664 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 231 gaagcaaggtagagattcttggaccatttctcct 264 ||||||| ||| |||||||||| ||||||||||| Sbjct: 32615419 gaagcaatgtaaagattcttggcccatttctcct 32615386
>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E07 Length = 176486 Score = 163 bits (82), Expect = 8e-37 Identities = 166/194 (85%) Strand = Plus / Plus Query: 262 ccttcacatgctgactggggaaagcagatgttctcagtgtctcttgagtttcatcggtag 321 |||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 162024 ccttgacatgttgactagggaaagcagatgttctcagcgtctcttgagtttcatctgtag 162083 Query: 322 gcttccttcttggtacacttaagatcagtgcagtctgatcccaagtcgcagcaactgctg 381 ||||||||||||| || ||||| | | ||||| ||||||||| || |||||| ||| | Sbjct: 162084 gcttccttcttgggacgcttaaaacgaatgcagcctgatcccaggttgcagcagttgcag 162143 Query: 382 ttatccggtaaccactgtcccacctcttatggactccctcactagggtacaagaagtcca 441 |||||||||||||| ||||||| |||| || | ||||||||| ||||| | |||||||| Sbjct: 162144 ttatccggtaaccattgtcccatctctggtgaattccctcactggggtataggaagtcca 162203 Query: 442 gctcaacaacctgt 455 | || ||||||||| Sbjct: 162204 gttcgacaacctgt 162217 Score = 103 bits (52), Expect = 7e-19 Identities = 118/140 (84%) Strand = Plus / Plus Query: 450 acctgttcggaaaaccctgcattgcgagacataacaaccgcccatttctttccagcagtt 509 ||||| || ||||| || ||||| || ||||||||||| |||||| | ||||||| ||| Sbjct: 162290 acctgatcagaaaatccagcattacgcgacataacaactgcccatctacttccagctgtt 162349 Query: 510 gccatggaagtcacatagaaattatcacgccatttcttgtttatccacttgaagggaaag 569 ||||||||||||||||| ||| || | |||||||||||||||||| ||||| || || Sbjct: 162350 gccatggaagtcacataaaaaccgtccctccatttcttgtttatccatttgaaagggaaa 162409 Query: 570 gtatcacttactttatagga 589 |||||||||||||| ||||| Sbjct: 162410 gtatcacttactttgtagga 162429 Score = 95.6 bits (48), Expect = 2e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 197 agatttctacgatacggtacgcccataacatactgaagcaaggtagagattcttggacca 256 ||||||||| ||||| ||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 161871 agatttctaggatacagtacgtccatagcatactgatgcaaggtagagattcttggacca 161930 Query: 257 tttctcct 264 |||||||| Sbjct: 161931 tttctcct 161938
>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0014K08 Length = 177263 Score = 163 bits (82), Expect = 8e-37 Identities = 166/194 (85%) Strand = Plus / Plus Query: 262 ccttcacatgctgactggggaaagcagatgttctcagtgtctcttgagtttcatcggtag 321 |||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 31390 ccttgacatgttgactagggaaagcagatgttctcagcgtctcttgagtttcatctgtag 31449 Query: 322 gcttccttcttggtacacttaagatcagtgcagtctgatcccaagtcgcagcaactgctg 381 ||||||||||||| || ||||| | | ||||| ||||||||| || |||||| ||| | Sbjct: 31450 gcttccttcttgggacgcttaaaacgaatgcagcctgatcccaggttgcagcagttgcag 31509 Query: 382 ttatccggtaaccactgtcccacctcttatggactccctcactagggtacaagaagtcca 441 |||||||||||||| ||||||| |||| || | ||||||||| ||||| | |||||||| Sbjct: 31510 ttatccggtaaccattgtcccatctctggtgaattccctcactggggtataggaagtcca 31569 Query: 442 gctcaacaacctgt 455 | || ||||||||| Sbjct: 31570 gttcgacaacctgt 31583 Score = 103 bits (52), Expect = 7e-19 Identities = 118/140 (84%) Strand = Plus / Plus Query: 450 acctgttcggaaaaccctgcattgcgagacataacaaccgcccatttctttccagcagtt 509 ||||| || ||||| || ||||| || ||||||||||| |||||| | ||||||| ||| Sbjct: 31656 acctgatcagaaaatccagcattacgcgacataacaactgcccatctacttccagctgtt 31715 Query: 510 gccatggaagtcacatagaaattatcacgccatttcttgtttatccacttgaagggaaag 569 ||||||||||||||||| ||| || | |||||||||||||||||| ||||| || || Sbjct: 31716 gccatggaagtcacataaaaaccgtccctccatttcttgtttatccatttgaaagggaaa 31775 Query: 570 gtatcacttactttatagga 589 |||||||||||||| ||||| Sbjct: 31776 gtatcacttactttgtagga 31795 Score = 95.6 bits (48), Expect = 2e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 197 agatttctacgatacggtacgcccataacatactgaagcaaggtagagattcttggacca 256 ||||||||| ||||| ||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 31237 agatttctaggatacagtacgtccatagcatactgatgcaaggtagagattcttggacca 31296 Query: 257 tttctcct 264 |||||||| Sbjct: 31297 tttctcct 31304
>ref|NM_191171.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1638 Score = 153 bits (77), Expect = 8e-34 Identities = 158/185 (85%) Strand = Plus / Minus Query: 267 acatgctgactggggaaagcagatgttctcagtgtctcttgagtttcatcggtaggcttc 326 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1472 acatgttgactagggaaagcagatgttctcagcgtctcttgagtttcatctgtaggcttc 1413 Query: 327 cttcttggtacacttaagatcagtgcagtctgatcccaagtcgcagcaactgctgttatc 386 |||||||| || ||||| | | ||||| ||||||||| || |||||| ||| |||||| Sbjct: 1412 cttcttgggacgcttaaaacgaatgcagcctgatcccaggttgcagcagttgcagttatc 1353 Query: 387 cggtaaccactgtcccacctcttatggactccctcactagggtacaagaagtccagctca 446 ||||||||| ||||||| |||| || | ||||||||| ||||| | ||||||||| || Sbjct: 1352 cggtaaccattgtcccatctctggtgaattccctcactggggtataggaagtccagttcg 1293 Query: 447 acaac 451 ||||| Sbjct: 1292 acaac 1288
>ref|XM_476111.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1827 Score = 109 bits (55), Expect = 1e-20 Identities = 283/359 (78%) Strand = Plus / Minus Query: 231 gaagcaaggtagagattcttggaccatttctccttcacatgctgactggggaaagcagat 290 ||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 1799 gaagctaggtaaagattcttcgaccatttctccttcacatgctggctggggaaagcagat 1740 Query: 291 gttctcagtgtctcttgagtttcatcggtaggcttccttcttggtacacttaagatcagt 350 || ||||| || || || |||||||| | |||||| ||||| || | || ||||| | | Sbjct: 1739 gtcctcagggtttcctgtgtttcatcagcaggctttcttctgggaatgctcaagataaat 1680 Query: 351 gcagtctgatcccaagtcgcagcaactgctgttatccggtaaccactgtcccacctctta 410 || | ||| ||||| || || || ||| ||||| || ||||| ||||||| | | | Sbjct: 1679 gccgcctggtcccatgtagctgctgttgcagttatgcgaaaaccattgtcccaacgccga 1620 Query: 411 tggactccctcactagggtacaagaagtccagctcaacaacctgttcggaaaaccctgca 470 || | ||||||||| || |||| |||||| ||||| |||||||| || | ||| || ||| Sbjct: 1619 tgtattccctcacttggatacaggaagtcaagctccacaacctgatctgtaaagccagca 1560 Query: 471 ttgcgagacataacaaccgcccatttctttccagcagttgccatggaagtcacatagaaa 530 || || ||||| || || ||||| |||| ||||| ||||| | ||| ||||||||| Sbjct: 1559 ttccgggacatgaccactgcccaccggcttcctgcagtggccatagcagtgacatagaaa 1500 Query: 531 ttatcacgccatttcttgtttatccacttgaagggaaaggtatcacttactttatagga 589 || ||| |||||||||||||||||||||||||| | || |||||||| ||||| Sbjct: 1499 ccctccttccacttcttgtttatccacttgaagggaaatgagtcgcttactttgtagga 1441
>dbj|AK100357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083K12, full insert sequence Length = 2696 Score = 109 bits (55), Expect = 1e-20 Identities = 283/359 (78%) Strand = Plus / Minus Query: 231 gaagcaaggtagagattcttggaccatttctccttcacatgctgactggggaaagcagat 290 ||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 2064 gaagctaggtaaagattcttcgaccatttctccttcacatgctggctggggaaagcagat 2005 Query: 291 gttctcagtgtctcttgagtttcatcggtaggcttccttcttggtacacttaagatcagt 350 || ||||| || || || |||||||| | |||||| ||||| || | || ||||| | | Sbjct: 2004 gtcctcagggtttcctgtgtttcatcagcaggctttcttctgggaatgctcaagataaat 1945 Query: 351 gcagtctgatcccaagtcgcagcaactgctgttatccggtaaccactgtcccacctctta 410 || | ||| ||||| || || || ||| ||||| || ||||| ||||||| | | | Sbjct: 1944 gccgcctggtcccatgtagctgctgttgcagttatgcgaaaaccattgtcccaacgccga 1885 Query: 411 tggactccctcactagggtacaagaagtccagctcaacaacctgttcggaaaaccctgca 470 || | ||||||||| || |||| |||||| ||||| |||||||| || | ||| || ||| Sbjct: 1884 tgtattccctcacttggatacaggaagtcaagctccacaacctgatctgtaaagccagca 1825 Query: 471 ttgcgagacataacaaccgcccatttctttccagcagttgccatggaagtcacatagaaa 530 || || ||||| || || ||||| |||| ||||| ||||| | ||| ||||||||| Sbjct: 1824 ttccgggacatgaccactgcccaccggcttcctgcagtggccatagcagtgacatagaaa 1765 Query: 531 ttatcacgccatttcttgtttatccacttgaagggaaaggtatcacttactttatagga 589 || ||| |||||||||||||||||||||||||| | || |||||||| ||||| Sbjct: 1764 ccctccttccacttcttgtttatccacttgaagggaaatgagtcgcttactttgtagga 1706
>dbj|AK072116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126I12, full insert sequence Length = 2431 Score = 109 bits (55), Expect = 1e-20 Identities = 283/359 (78%) Strand = Plus / Minus Query: 231 gaagcaaggtagagattcttggaccatttctccttcacatgctgactggggaaagcagat 290 ||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 2061 gaagctaggtaaagattcttcgaccatttctccttcacatgctggctggggaaagcagat 2002 Query: 291 gttctcagtgtctcttgagtttcatcggtaggcttccttcttggtacacttaagatcagt 350 || ||||| || || || |||||||| | |||||| ||||| || | || ||||| | | Sbjct: 2001 gtcctcagggtttcctgtgtttcatcagcaggctttcttctgggaatgctcaagataaat 1942 Query: 351 gcagtctgatcccaagtcgcagcaactgctgttatccggtaaccactgtcccacctctta 410 || | ||| ||||| || || || ||| ||||| || ||||| ||||||| | | | Sbjct: 1941 gccgcctggtcccatgtagctgctgttgcagttatgcgaaaaccattgtcccaacgccga 1882 Query: 411 tggactccctcactagggtacaagaagtccagctcaacaacctgttcggaaaaccctgca 470 || | ||||||||| || |||| |||||| ||||| |||||||| || | ||| || ||| Sbjct: 1881 tgtattccctcacttggatacaggaagtcaagctccacaacctgatctgtaaagccagca 1822 Query: 471 ttgcgagacataacaaccgcccatttctttccagcagttgccatggaagtcacatagaaa 530 || || ||||| || || ||||| |||| ||||| ||||| | ||| ||||||||| Sbjct: 1821 ttccgggacatgaccactgcccaccggcttcctgcagtggccatagcagtgacatagaaa 1762 Query: 531 ttatcacgccatttcttgtttatccacttgaagggaaaggtatcacttactttatagga 589 || ||| |||||||||||||||||||||||||| | || |||||||| ||||| Sbjct: 1761 ccctccttccacttcttgtttatccacttgaagggaaatgagtcgcttactttgtagga 1703
>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence Length = 279448 Score = 95.6 bits (48), Expect = 2e-16 Identities = 156/192 (81%) Strand = Plus / Plus Query: 262 ccttcacatgctgactggggaaagcagatgttctcagtgtctcttgagtttcatcggtag 321 |||||||||| |||| |||||| || ||| |||||||||||||| |||| ||| ||| Sbjct: 100802 ccttcacatgttgacaagggaaatcaagtgtcctcagtgtctcttgggtttgatctctag 100861 Query: 322 gcttccttcttggtacacttaagatcagtgcagtctgatcccaagtcgcagcaactgctg 381 | ||| | |||||||||||| | | || | |||||||||||| |||| | |||| | Sbjct: 100862 gtcgcctccatggtacacttaaaacaaaggctgcctgatcccaagttgcagtagctgcgg 100921 Query: 382 ttatccggtaaccactgtcccacctcttatggactccctcactagggtacaagaagtcca 441 |||||||||||||| || ||||||| ||||| | ||||||||| || |||||||| |||| Sbjct: 100922 ttatccggtaaccagtggcccaccttttatgaattccctcactgggatacaagaaatcca 100981 Query: 442 gctcaacaacct 453 | |||||||||| Sbjct: 100982 gttcaacaacct 100993 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 459 gaaaaccctgcattgcgagacataacaaccgcccatttctttccagcagttgccatggaa 518 |||||||| ||||| | |||||| ||||| ||||| | |||||||||||||||||||| Sbjct: 101101 gaaaacccagcattacaagacatgacaacaacccatctacttccagcagttgccatggaa 101160 Query: 519 gtcacatagaaattatcacgccatttcttgtttatccacttgaagggaaaggtatcactt 578 || ||||||||| ||| |||||||||| |||||||| | | |||| || |||||||| Sbjct: 101161 gttacatagaaaccatcttgccatttcttctttatccagtcgtaggggaaagtatcacta 101220 Query: 579 actttatagga 589 ||||| ||||| Sbjct: 101221 actttgtagga 101231 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 194 aaaagatttctacgatacggtacgcccataacatactgaagcaaggtagagattcttgga 253 |||||||| ||| ||||| ||||| || || |||||||| || |||||||||||| | || Sbjct: 100650 aaaagattcctaggatacagtacgaccgtagcatactgatgctaggtagagattcataga 100709 Query: 254 ccatttctcct 264 ||||||||||| Sbjct: 100710 ccatttctcct 100720
>gb|AY107968.1| Zea mays PCO134958 mRNA sequence Length = 702 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 231 gaagcaaggtagagattcttggaccatttctccttcacatgctgactggggaaagcagat 290 ||||| ||||| || |||||||||||||| |||||||||||||| || || || |||||| Sbjct: 318 gaagctaggtacaggttcttggaccatttgtccttcacatgctggctaggaaacgcagat 259 Query: 291 gttctcagtgtctcttgagtttcatcggtaggcttccttcttgg 334 ||||| || ||||| || |||||||| |||||||| || ||||| Sbjct: 258 gttctaagggtctcctgtgtttcatcagtaggctttctccttgg 215
>ref|NM_188260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1866 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 254 ccatttctccttcacatgctgactggggaaagcagatgttctcagtgtctcttgagtttc 313 |||||| ||||| |||||||| | || ||||||||||||||||||||||| || ||||| Sbjct: 1815 ccatttttcctttacatgctggccaggaaaagcagatgttctcagtgtctcctgtgtttc 1756 Query: 314 atcggtaggcttccttcttggta 336 |||| ||||||| ||||| |||| Sbjct: 1755 atcgttaggctttcttctaggta 1733 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 546 ttgtttatccacttgaagggaaaggtatcacttactttataggactgctg 595 ||||||||||| ||||||||||| | |||||||||||| ||||| ||||| Sbjct: 1523 ttgtttatccatttgaagggaaatgaatcacttactttgtaggattgctg 1474
>gb|AF479055.1| Triticum aestivum casein kinase-like protein mRNA, partial cds Length = 345 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 243 agattcttggaccatttctccttcacatgctgactggggaaagcagatgttctcagtgtc 302 ||||| || |||||||| |||||||||||||| || ||||||||||||||||| || ||| Sbjct: 305 agattttttgaccatttttccttcacatgctggctcgggaaagcagatgttcttagcgtc 246 Query: 303 tcttgagtttcatcggtaggctt 325 || || |||||||| ||||||| Sbjct: 245 tcctgtgtttcatcattaggctt 223
>dbj|AK103403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128C13, full insert sequence Length = 2211 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 254 ccatttctccttcacatgctgactggggaaagcagatgttctcagtgtctcttgagtttc 313 |||||| ||||| |||||||| | || ||||||||||||||||||||||| || ||||| Sbjct: 2066 ccatttttcctttacatgctggccaggaaaagcagatgttctcagtgtctcctgtgtttc 2007 Query: 314 atcggtaggcttccttcttggta 336 |||| ||||||| ||||| |||| Sbjct: 2006 atcgttaggctttcttctaggta 1984 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 546 ttgtttatccacttgaagggaaaggtatcacttactttataggactgctg 595 ||||||||||| ||||||||||| | |||||||||||| ||||| ||||| Sbjct: 1774 ttgtttatccatttgaagggaaatgaatcacttactttgtaggattgctg 1725
>dbj|AK099617.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051B07, full insert sequence Length = 1213 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 254 ccatttctccttcacatgctgactggggaaagcagatgttctcagtgtctcttgagtttc 313 |||||| ||||| |||||||| | || ||||||||||||||||||||||| || ||||| Sbjct: 1056 ccatttttcctttacatgctggccaggaaaagcagatgttctcagtgtctcctgtgtttc 997 Query: 314 atcggtaggcttccttcttggta 336 |||| ||||||| ||||| |||| Sbjct: 996 atcgttaggctttcttctaggta 974 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 546 ttgtttatccacttgaagggaaaggtatcacttactttataggactgctg 595 ||||||||||| ||||||||||| | |||||||||||| ||||| ||||| Sbjct: 764 ttgtttatccatttgaagggaaatgaatcacttactttgtaggattgctg 715
>dbj|AK060271.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-E10, full insert sequence Length = 1581 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 254 ccatttctccttcacatgctgactggggaaagcagatgttctcagtgtctcttgagtttc 313 |||||| ||||| |||||||| | || ||||||||||||||||||||||| || ||||| Sbjct: 1457 ccatttttcctttacatgctggccaggaaaagcagatgttctcagtgtctcctgtgtttc 1398 Query: 314 atcggtaggcttccttcttggta 336 |||| ||||||| ||||| |||| Sbjct: 1397 atcgttaggctttcttctaggta 1375 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 546 ttgtttatccacttgaagggaaaggtatcacttactttataggactgctg 595 ||||||||||| ||||||||||| | |||||||||||| ||||| ||||| Sbjct: 1165 ttgtttatccatttgaagggaaatgaatcacttactttgtaggattgctg 1116
>ref|NM_128136.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT2G25760 transcript variant AT2G25760.1 mRNA, complete cds Length = 2604 Score = 75.8 bits (38), Expect = 1e-10 Identities = 121/146 (82%), Gaps = 2/146 (1%) Strand = Plus / Minus Query: 234 gcaaggtagagattcttggaccatttctccttcacatgctgactggggaaagcagatgtt 293 |||| ||| ||||||||| |||||| ||||| ||||| | ||| || |||||||| ||| Sbjct: 2263 gcaatgtaaagattcttgccccatttttccttgacatgattactaggaaaagcagaggtt 2204 Query: 294 ctcagtgtctcttgagtttcatcggtaggcttccttcttggtacacttaagatc-agtgc 352 || || ||||| || || ||||||||| ||||||||||||| |||| ||||| | | || Sbjct: 2203 ctaagagtctcctgtgtctcatcggtaagcttccttcttggcacac-taagaacaaaggc 2145 Query: 353 agtctgatcccaagtcgcagcaactg 378 || |||||||||||| |||||||||| Sbjct: 2144 agcctgatcccaagttgcagcaactg 2119 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 549 tttatccacttgaagggaaaggtatcacttactttatagga 589 |||||||||||||||||||| | |||||| ||||| ||||| Sbjct: 1948 tttatccacttgaagggaaaagaatcactgactttgtagga 1908
>ref|NM_201803.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT2G25760 transcript variant AT2G25760.2 mRNA, complete cds Length = 2613 Score = 75.8 bits (38), Expect = 1e-10 Identities = 121/146 (82%), Gaps = 2/146 (1%) Strand = Plus / Minus Query: 234 gcaaggtagagattcttggaccatttctccttcacatgctgactggggaaagcagatgtt 293 |||| ||| ||||||||| |||||| ||||| ||||| | ||| || |||||||| ||| Sbjct: 2272 gcaatgtaaagattcttgccccatttttccttgacatgattactaggaaaagcagaggtt 2213 Query: 294 ctcagtgtctcttgagtttcatcggtaggcttccttcttggtacacttaagatc-agtgc 352 || || ||||| || || ||||||||| ||||||||||||| |||| ||||| | | || Sbjct: 2212 ctaagagtctcctgtgtctcatcggtaagcttccttcttggcacac-taagaacaaaggc 2154 Query: 353 agtctgatcccaagtcgcagcaactg 378 || |||||||||||| |||||||||| Sbjct: 2153 agcctgatcccaagttgcagcaactg 2128 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 549 tttatccacttgaagggaaaggtatcacttactttatagga 589 |||||||||||||||||||| | |||||| ||||| ||||| Sbjct: 1957 tttatccacttgaagggaaaagaatcactgactttgtagga 1917
>gb|AY070056.1| Arabidopsis thaliana At2g25760 mRNA sequence Length = 2695 Score = 75.8 bits (38), Expect = 1e-10 Identities = 121/146 (82%), Gaps = 2/146 (1%) Strand = Plus / Minus Query: 234 gcaaggtagagattcttggaccatttctccttcacatgctgactggggaaagcagatgtt 293 |||| ||| ||||||||| |||||| ||||| ||||| | ||| || |||||||| ||| Sbjct: 2413 gcaatgtaaagattcttgccccatttttccttgacatgattactaggaaaagcagaggtt 2354 Query: 294 ctcagtgtctcttgagtttcatcggtaggcttccttcttggtacacttaagatc-agtgc 352 || || ||||| || || ||||||||| ||||||||||||| |||| ||||| | | || Sbjct: 2353 ctaagagtctcctgtgtctcatcggtaagcttccttcttggcacac-taagaacaaaggc 2295 Query: 353 agtctgatcccaagtcgcagcaactg 378 || |||||||||||| |||||||||| Sbjct: 2294 agcctgatcccaagttgcagcaactg 2269 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 549 tttatccacttgaagggaaaggtatcacttactttatagga 589 |||||||||||||||||||| | |||||| ||||| ||||| Sbjct: 2098 tttatccacttgaagggaaaagaatcactgactttgtagga 2058
>gb|BT016369.1| Zea mays clone Contig202 mRNA sequence Length = 1110 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 539 ccatttcttgtttatccacttgaagggaaaggtatcacttactttataggactgctgagt 598 ||||||||||||||||||||| || ||||||| |||||| |||||||| || ||||| || Sbjct: 687 ccatttcttgtttatccacttaaatggaaaggaatcactgactttataagattgctgtgt 746 Query: 599 ata 601 ||| Sbjct: 747 ata 749 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 233 agcaaggtagagattcttggaccatttctccttcacatgctgactggg 280 |||||||||||||||||||| ||| || ||||| ||||| |||||||| Sbjct: 381 agcaaggtagagattcttggcccacttgtccttgacatgttgactggg 428 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 417 ccctcactagggtacaagaagtccagctcaacaacctgttcggaaaaccctgcattgcga 476 ||||| || |||||||||||||||| ||| |||||||| || ||||| || ||| |||| Sbjct: 565 ccctcgctcgggtacaagaagtccaactccacaacctgctcagaaaatccagcactgcgg 624 Query: 477 gacat 481 ||||| Sbjct: 625 gacat 629
>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1046G12 Length = 163533 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 282 aaagcagatgttctcagtgtctcttgagtttcatcggtaggcttccttcttggta 336 ||||||||||||||||||||||| || ||||||||| ||||||| ||||| |||| Sbjct: 79663 aaagcagatgttctcagtgtctcctgtgtttcatcgttaggctttcttctaggta 79717 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 546 ttgtttatccacttgaagggaaaggtatcacttactttataggactgctg 595 ||||||||||| ||||||||||| | |||||||||||| ||||| ||||| Sbjct: 80049 ttgtttatccatttgaagggaaatgaatcacttactttgtaggattgctg 80098
>dbj|AP003244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0419B01 Length = 149610 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 282 aaagcagatgttctcagtgtctcttgagtttcatcggtaggcttccttcttggta 336 ||||||||||||||||||||||| || ||||||||| ||||||| ||||| |||| Sbjct: 123570 aaagcagatgttctcagtgtctcctgtgtttcatcgttaggctttcttctaggta 123624 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 546 ttgtttatccacttgaagggaaaggtatcacttactttataggactgctg 595 ||||||||||| ||||||||||| | |||||||||||| ||||| ||||| Sbjct: 123956 ttgtttatccatttgaagggaaatgaatcacttactttgtaggattgctg 124005
>gb|BT024079.1| Zea mays clone EL01N0525A10 mRNA sequence Length = 2294 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 539 ccatttcttgtttatccacttgaagggaaaggtatcacttactttataggactgctgagt 598 ||||||||||||||||||||| || ||||||| |||||| |||||||| || ||||| || Sbjct: 1571 ccatttcttgtttatccacttaaatggaaaggaatcactgactttataagattgctgtgt 1512 Query: 599 ata 601 ||| Sbjct: 1511 ata 1509 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 417 ccctcactagggtacaagaagtccagctcaacaacctgttcggaaaaccctgcattgcga 476 ||||| || |||||||||||||||| ||| |||||||| || ||||| || ||| |||| Sbjct: 1693 ccctcgctcgggtacaagaagtccaactccacaacctgctcagaaaatccagcactgcgg 1634 Query: 477 gacat 481 ||||| Sbjct: 1633 gacat 1629 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Minus Query: 233 agcaaggtagagattcttggaccatttctccttcacatgctgactggg 280 ||||||| |||||||||||| ||| || ||||| ||||| |||||||| Sbjct: 1877 agcaagggagagattcttggcccacttgtccttgacatgttgactggg 1830
>gb|AY105752.1| Zea mays PCO066784 mRNA sequence Length = 2154 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 539 ccatttcttgtttatccacttgaagggaaaggtatcacttactttataggactgctgagt 598 ||||||||||||||||||||| || ||||||| |||||| |||||||| || ||||| || Sbjct: 1476 ccatttcttgtttatccacttaaatggaaaggaatcactgactttataagattgctgtgt 1417 Query: 599 ata 601 ||| Sbjct: 1416 ata 1414 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 233 agcaaggtagagattcttggaccatttctccttcacatgctgactggg 280 |||||||||||||||||||| ||| || ||||| ||||| |||||||| Sbjct: 1782 agcaaggtagagattcttggcccacttgtccttgacatgttgactggg 1735 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Minus Query: 417 ccctcactagggtacaagaagtccagctcaacaacctgttcggaaaaccctgcattgcga 476 ||||| || |||||||||||||||| ||| |||||||| || ||||| || ||| |||| Sbjct: 1598 ccctcgctcgggtacaagaagtccaactccacaacctgctcagaaaatccagcactgcgg 1539 Query: 477 gacat 481 ||||| Sbjct: 1538 gacat 1534
>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence Length = 151656 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 262 ccttcacatgctgactggggaaagcagatgttctcagtgtctcttgagtttcatcggtag 321 ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| | || Sbjct: 139700 ccttcacatgctggctggggaaagcagatgtcctcagggtttcctgtgtttcatcagcag 139759 Query: 322 gcttccttct 331 |||| ||||| Sbjct: 139760 gctttcttct 139769 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 543 ttcttgtttatccacttgaagggaaaggtatcacttactttatagga 589 |||||||||||||||||||||||||| | || |||||||| ||||| Sbjct: 140152 ttcttgtttatccacttgaagggaaatgagtcgcttactttgtagga 140198 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 231 gaagcaaggtagagattcttggaccatttctcct 264 ||||| ||||| |||||||| ||||||||||||| Sbjct: 139595 gaagctaggtaaagattcttcgaccatttctcct 139628
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence Length = 172647 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 262 ccttcacatgctgactggggaaagcagatgttctcagtgtctcttgagtttcatcggtag 321 ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| | || Sbjct: 22486 ccttcacatgctggctggggaaagcagatgtcctcagggtttcctgtgtttcatcagcag 22545 Query: 322 gcttccttct 331 |||| ||||| Sbjct: 22546 gctttcttct 22555 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 543 ttcttgtttatccacttgaagggaaaggtatcacttactttatagga 589 |||||||||||||||||||||||||| | || |||||||| ||||| Sbjct: 22938 ttcttgtttatccacttgaagggaaatgagtcgcttactttgtagga 22984 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 231 gaagcaaggtagagattcttggaccatttctcct 264 ||||| ||||| |||||||| ||||||||||||| Sbjct: 22381 gaagctaggtaaagattcttcgaccatttctcct 22414
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 262 ccttcacatgctgactggggaaagcagatgttctcagtgtctcttgagtttcatcggtag 321 ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| | || Sbjct: 6192131 ccttcacatgctggctggggaaagcagatgtcctcagggtttcctgtgtttcatcagcag 6192190 Query: 322 gcttccttct 331 |||| ||||| Sbjct: 6192191 gctttcttct 6192200 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 543 ttcttgtttatccacttgaagggaaaggtatcacttactttatagga 589 |||||||||||||||||||||||||| | || |||||||| ||||| Sbjct: 6192583 ttcttgtttatccacttgaagggaaatgagtcgcttactttgtagga 6192629 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 231 gaagcaaggtagagattcttggaccatttctcct 264 ||||| ||||| |||||||| ||||||||||||| Sbjct: 6192026 gaagctaggtaaagattcttcgaccatttctcct 6192059
>ref|NM_191434.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2097 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 231 gaagcaaggtagagattcttggaccatttctccttcacatgctgactggggaaagcagat 290 ||||||| ||| |||||||||| |||||||||||||||||| | || || ||||||||| Sbjct: 2069 gaagcaatgtaaagattcttggcccatttctccttcacatggttgcttggaaaagcagat 2010 Query: 291 gttct 295 ||||| Sbjct: 2009 gttct 2005 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 539 ccatttcttgtttatccacttgaagggaaaggtatcacttactttataggactgctgagt 598 |||||||||||| ||||| ||||||||||| | ||||| ||||| || ||||| ||||| Sbjct: 1761 ccatttcttgttgatccatttgaagggaaacgattcactaactttgtaagactgttgagt 1702
>dbj|AK120893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029O03, full insert sequence Length = 2788 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 231 gaagcaaggtagagattcttggaccatttctccttcacatgctgactggggaaagcagat 290 ||||||| ||| |||||||||| |||||||||||||||||| | || || ||||||||| Sbjct: 2238 gaagcaatgtaaagattcttggcccatttctccttcacatggttgcttggaaaagcagat 2179 Query: 291 gttct 295 ||||| Sbjct: 2178 gttct 2174 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 539 ccatttcttgtttatccacttgaagggaaaggtatcacttactttataggactgctgagt 598 |||||||||||| ||||| ||||||||||| | ||||| ||||| || ||||| ||||| Sbjct: 1930 ccatttcttgttgatccatttgaagggaaacgattcactaactttgtaagactgttgagt 1871
>dbj|AK104917.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-F04, full insert sequence Length = 1360 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 231 gaagcaaggtagagattcttggaccatttctccttcacatgctgactggggaaagcagat 290 ||||||| ||| |||||||||| |||||||||||||||||| | || || ||||||||| Sbjct: 800 gaagcaatgtaaagattcttggcccatttctccttcacatggttgcttggaaaagcagat 741 Query: 291 gttct 295 ||||| Sbjct: 740 gttct 736 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 539 ccatttcttgtttatccacttgaagggaaaggtatcacttactttataggactgctgagt 598 |||||||||||| ||||| ||||||||||| | ||||| ||||| || ||||| ||||| Sbjct: 492 ccatttcttgttgatccatttgaagggaaacgattcactaactttgtaagactgttgagt 433
>dbj|AK069612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019A22, full insert sequence Length = 2851 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 231 gaagcaaggtagagattcttggaccatttctccttcacatgctgactggggaaagcagat 290 ||||||| ||| |||||||||| |||||||||||||||||| | || || ||||||||| Sbjct: 2312 gaagcaatgtaaagattcttggcccatttctccttcacatggttgcttggaaaagcagat 2253 Query: 291 gttct 295 ||||| Sbjct: 2252 gttct 2248 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 539 ccatttcttgtttatccacttgaagggaaaggtatcacttactttataggactgctgagt 598 |||||||||||| ||||| ||||||||||| | ||||| ||||| || ||||| ||||| Sbjct: 2004 ccatttcttgttgatccatttgaagggaaacgattcactaactttgtaagactgttgagt 1945
>ref|NM_202577.1| Arabidopsis thaliana unknown protein AT3G13672 transcript variant AT3G13672.2 mRNA, complete cds Length = 1662 Score = 63.9 bits (32), Expect = 6e-07 Identities = 107/132 (81%) Strand = Plus / Plus Query: 470 attgcgagacataacaaccgcccatttctttccagcagttgccatggaagtcacatagaa 529 |||||| ||||||||||| ||||| |||||||| |||||||| || || |||| ||| Sbjct: 1459 attgcgggacataacaacaccccatcgatttccagctgttgccattgaggttacatggaa 1518 Query: 530 attatcacgccatttcttgtttatccacttgaagggaaaggtatcacttactttatagga 589 || | |||||||||||||||||||||||| || || | ||| |||||||| || || Sbjct: 1519 gccttctctccatttcttgtttatccacttgaacgggaatgaatcgcttactttgtaaga 1578 Query: 590 ctgctgagtata 601 |||||| ||||| Sbjct: 1579 ctgctgtgtata 1590
>ref|NM_112215.2| Arabidopsis thaliana unknown protein AT3G13672 transcript variant AT3G13672.1 mRNA, complete cds Length = 1665 Score = 63.9 bits (32), Expect = 6e-07 Identities = 107/132 (81%) Strand = Plus / Plus Query: 470 attgcgagacataacaaccgcccatttctttccagcagttgccatggaagtcacatagaa 529 |||||| ||||||||||| ||||| |||||||| |||||||| || || |||| ||| Sbjct: 1461 attgcgggacataacaacaccccatcgatttccagctgttgccattgaggttacatggaa 1520 Query: 530 attatcacgccatttcttgtttatccacttgaagggaaaggtatcacttactttatagga 589 || | |||||||||||||||||||||||| || || | ||| |||||||| || || Sbjct: 1521 gccttctctccatttcttgtttatccacttgaacgggaatgaatcgcttactttgtaaga 1580 Query: 590 ctgctgagtata 601 |||||| ||||| Sbjct: 1581 ctgctgtgtata 1592
>ref|NM_112214.3| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT3G13670 mRNA, complete cds Length = 2779 Score = 63.9 bits (32), Expect = 6e-07 Identities = 107/132 (81%) Strand = Plus / Minus Query: 470 attgcgagacataacaaccgcccatttctttccagcagttgccatggaagtcacatagaa 529 |||||| ||||||||||| ||||| |||||||| |||||||| || || |||| ||| Sbjct: 2057 attgcgggacataacaacaccccatcgatttccagctgttgccattgaggttacatggaa 1998 Query: 530 attatcacgccatttcttgtttatccacttgaagggaaaggtatcacttactttatagga 589 || | |||||||||||||||||||||||| || || | ||| |||||||| || || Sbjct: 1997 gccttctctccatttcttgtttatccacttgaacgggaatgaatcgcttactttgtaaga 1938 Query: 590 ctgctgagtata 601 |||||| ||||| Sbjct: 1937 ctgctgtgtata 1926
>gb|AY117204.1| Arabidopsis thaliana putative casein kinase (At3g13670) mRNA, complete cds Length = 2143 Score = 63.9 bits (32), Expect = 6e-07 Identities = 107/132 (81%) Strand = Plus / Minus Query: 470 attgcgagacataacaaccgcccatttctttccagcagttgccatggaagtcacatagaa 529 |||||| ||||||||||| ||||| |||||||| |||||||| || || |||| ||| Sbjct: 1845 attgcgggacataacaacaccccatcgatttccagctgttgccattgaggttacatggaa 1786 Query: 530 attatcacgccatttcttgtttatccacttgaagggaaaggtatcacttactttatagga 589 || | |||||||||||||||||||||||| || || | ||| |||||||| || || Sbjct: 1785 gccttctctccatttcttgtttatccacttgaacgggaatgaatcgcttactttgtaaga 1726 Query: 590 ctgctgagtata 601 |||||| ||||| Sbjct: 1725 ctgctgtgtata 1714
>gb|AY080703.1| Arabidopsis thaliana putative casein kinase (At3g13670) mRNA, complete cds Length = 2653 Score = 63.9 bits (32), Expect = 6e-07 Identities = 107/132 (81%) Strand = Plus / Minus Query: 470 attgcgagacataacaaccgcccatttctttccagcagttgccatggaagtcacatagaa 529 |||||| ||||||||||| ||||| |||||||| |||||||| || || |||| ||| Sbjct: 2057 attgcgggacataacaacaccccatcgatttccagctgttgccattgaggttacatggaa 1998 Query: 530 attatcacgccatttcttgtttatccacttgaagggaaaggtatcacttactttatagga 589 || | |||||||||||||||||||||||| || || | ||| |||||||| || || Sbjct: 1997 gccttctctccatttcttgtttatccacttgaacgggaatgaatcgcttactttgtaaga 1938 Query: 590 ctgctgagtata 601 |||||| ||||| Sbjct: 1937 ctgctgtgtata 1926
>gb|AF370175.1| Arabidopsis thaliana putative seven in absentia protein (At3g13672) mRNA, complete cds Length = 1682 Score = 63.9 bits (32), Expect = 6e-07 Identities = 107/132 (81%) Strand = Plus / Plus Query: 470 attgcgagacataacaaccgcccatttctttccagcagttgccatggaagtcacatagaa 529 |||||| ||||||||||| ||||| |||||||| |||||||| || || |||| ||| Sbjct: 1461 attgcgggacataacaacaccccatcgatttccagctgttgccattgaggttacatggaa 1520 Query: 530 attatcacgccatttcttgtttatccacttgaagggaaaggtatcacttactttatagga 589 || | |||||||||||||||||||||||| || || | ||| |||||||| || || Sbjct: 1521 gccttctctccatttcttgtttatccacttgaacgggaatgaatcgcttactttgtaaga 1580 Query: 590 ctgctgagtata 601 |||||| ||||| Sbjct: 1581 ctgctgtgtata 1592
>dbj|AP001307.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMM17 Length = 80733 Score = 63.9 bits (32), Expect = 6e-07 Identities = 107/132 (81%) Strand = Plus / Minus Query: 470 attgcgagacataacaaccgcccatttctttccagcagttgccatggaagtcacatagaa 529 |||||| ||||||||||| ||||| |||||||| |||||||| || || |||| ||| Sbjct: 17619 attgcgggacataacaacaccccatcgatttccagctgttgccattgaggttacatggaa 17560 Query: 530 attatcacgccatttcttgtttatccacttgaagggaaaggtatcacttactttatagga 589 || | |||||||||||||||||||||||| || || | ||| |||||||| || || Sbjct: 17559 gccttctctccatttcttgtttatccacttgaacgggaatgaatcgcttactttgtaaga 17500 Query: 590 ctgctgagtata 601 |||||| ||||| Sbjct: 17499 ctgctgtgtata 17488
>gb|BT014172.1| Lycopersicon esculentum clone 133312F, mRNA sequence Length = 1365 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Minus Query: 216 cgcccataacatactgaagcaaggtagagattcttggaccatttctccttcacatgctga 275 ||||||||||| | || |||||||| ||||| || | |||||||||||| ||||| Sbjct: 880 cgcccataacagatagatgcaaggtaaagattttttgcccatttctccttgacatgagtg 821 Query: 276 ctggggaaagcagatgttctcagtgtctcttgagtttcatcggtaggcttccttcttggt 335 || || |||||||| || | ||||||||||| |||||||| | ||| ||||||||||| Sbjct: 820 ctaggaaaagcagaagtacgaagtgtctcttgtgtttcatctgcaggtttccttcttgga 761 Query: 336 acactta 342 ||||||| Sbjct: 760 acactta 754 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 474 cgagacataacaaccgcccatttctttccagcagttgccatggaagtcacatagaaatta 533 ||||||||||||| ||||||| | |||| ||||||||||||| ||| ||||| ||| Sbjct: 622 cgagacataacaatcgcccatctacttcctgcagttgccatggcagtgacataaaaaccc 563 Query: 534 tcacgccatttcttgtttatccacttgaagggaaa 568 || | |||||| ||||| |||||||| || ||||| Sbjct: 562 tctctccattttttgttaatccacttaaatggaaa 528
>gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 map B68, complete sequence Length = 102004 Score = 60.0 bits (30), Expect = 9e-06 Identities = 83/98 (84%), Gaps = 2/98 (2%) Strand = Plus / Minus Query: 282 aaagcagatgttctcagtgtctcttgagtttcatcggtaggcttccttcttggtacactt 341 |||||||| ||||| || ||||| || || ||||||||| ||||||||||||| |||| | Sbjct: 90684 aaagcagaggttctaagagtctcctgtgtctcatcggtaagcttccttcttggcacac-t 90626 Query: 342 aagatc-agtgcagtctgatcccaagtcgcagcaactg 378 |||| | | |||| |||||||||||| |||||||||| Sbjct: 90625 aagaacaaaggcagcctgatcccaagttgcagcaactg 90588 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 549 tttatccacttgaagggaaaggtatcacttactttatagga 589 |||||||||||||||||||| | |||||| ||||| ||||| Sbjct: 90315 tttatccacttgaagggaaaagaatcactgactttgtagga 90275
>ref|NM_121824.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT5G18190 mRNA, complete cds Length = 2324 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 501 ccagcagttgccatggaagtcacatagaaattatcacgccatttcttgtttatccacttg 560 |||||||||| |||||| || |||| ||||| || |||||||||||||||||||||| Sbjct: 1778 ccagcagttgtcatggaggttacatggaaatcttctttccatttcttgtttatccacttg 1719 Query: 561 aagggaaaggtatcacttactttataggactgctgagtata 601 || ||||| | || || ||||| || || ||||||||||| Sbjct: 1718 aaaggaaaagagtcgctgactttgtaagattgctgagtata 1678
>gb|BT003845.1| Arabidopsis thaliana clone RAFL15-16-J07 (R20580) putative casein kinase (At5g18190) mRNA, partial cds Length = 1161 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 501 ccagcagttgccatggaagtcacatagaaattatcacgccatttcttgtttatccacttg 560 |||||||||| |||||| || |||| ||||| || |||||||||||||||||||||| Sbjct: 626 ccagcagttgtcatggaggttacatggaaatcttctttccatttcttgtttatccacttg 567 Query: 561 aagggaaaggtatcacttactttataggactgctgagtata 601 || ||||| | || || ||||| || || ||||||||||| Sbjct: 566 aaaggaaaagagtcgctgactttgtaagattgctgagtata 526
>dbj|AB012246.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRG7 Length = 83948 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 501 ccagcagttgccatggaagtcacatagaaattatcacgccatttcttgtttatccacttg 560 |||||||||| |||||| || |||| ||||| || |||||||||||||||||||||| Sbjct: 34200 ccagcagttgtcatggaggttacatggaaatcttctttccatttcttgtttatccacttg 34259 Query: 561 aagggaaaggtatcacttactttataggactgctgagtata 601 || ||||| | || || ||||| || || ||||||||||| Sbjct: 34260 aaaggaaaagagtcgctgactttgtaagattgctgagtata 34300
>gb|AY112140.1| Zea mays CL67806_1 mRNA sequence Length = 434 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 256 atttctccttcacatgctgactggggaaagcagatgttctcagtgtctcttgagtttcat 315 |||| |||||||||||||| |||||||||||||| ||||| || || || || ||||||| Sbjct: 247 atttgtccttcacatgctggctggggaaagcagacgttcttagagtttcctgggtttcat 306 Query: 316 c 316 | Sbjct: 307 c 307
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 282 aaagcagatgttctcagtgtctcttgagtttcatcggtaggcttccttcttggtacact 340 ||||||||||| | |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 37308 aaagcagatgtccggagtgtctcttgagtttcatcagttggttttcttcttgggacact 37250
>emb|Y13108.1|BCNAPINPR B.campestris napin gene, promoter Length = 2084 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 539 ccatttcttgtttatccacttgaagggaaaggtatcacttactttataggactgctgag 597 ||||||||| |||||||||||||| ||||| | ||||| ||||| || |||||||||| Sbjct: 851 ccatttcttatttatccacttgaacggaaatgagtcactcactttgtatgactgctgag 793
>gb|M64633.1|BNANAPINC Brassica napus (clone BnNa) DNA sequence Length = 4338 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 539 ccatttcttgtttatccacttgaagggaaaggtatcacttactttataggactgctgag 597 ||||||||| |||||||||||||| ||||| | ||||| ||||| || |||||||||| Sbjct: 900 ccatttcttatttatccacttgaatggaaatgagtcactcactttgtatgactgctgag 842
>gb|M64632.1|BNANAPINB Brassica campestris (clone lambda GCN1-2) napin gene, complete cds Length = 4329 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 539 ccatttcttgtttatccacttgaagggaaaggtatcacttactttataggactgctgag 597 ||||||||| |||||||||||||| ||||| | ||||| ||||| || |||||||||| Sbjct: 899 ccatttcttatttatccacttgaacggaaatgagtcactcactttgtatgactgctgag 841
>ref|NM_111265.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT3G03940 mRNA, complete cds Length = 2629 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 380 tgttatccggtaaccactgtcccacctcttatggactccctcactagggtacaagaagtc 439 |||||||| ||| ||||| |||||||| ||| | ||| ||||| |||||||||||||| Sbjct: 2298 tgttatcctgtatccactttcccaccttcgatgtattccttcacttgggtacaagaagtc 2239 Query: 440 cagctcaacaacctgttc 457 ||||| || |||||||| Sbjct: 2238 aagctccaccacctgttc 2221 Score = 42.1 bits (21), Expect = 2.1 Identities = 81/101 (80%) Strand = Plus / Minus Query: 219 ccataacatactgaagcaaggtagagattcttggaccatttctccttcacatgctgactg 278 ||||| |||| ||| |||| ||| ||||| || | |||||||||||| ||||| ||| Sbjct: 2459 ccatagcatattgatgcaatgtacagatttttcgcccatttctccttgacatgggtactt 2400 Query: 279 gggaaagcagatgttctcagtgtctcttgagtttcatcggt 319 ||||| ||||| || | || |||||||| ||||||||||| Sbjct: 2399 gggaaggcagaagtccggagagtctcttgggtttcatcggt 2359
>gb|AY128325.1| Arabidopsis thaliana putative casein kinase (At3g03940) mRNA, complete cds Length = 1287 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 380 tgttatccggtaaccactgtcccacctcttatggactccctcactagggtacaagaagtc 439 |||||||| ||| ||||| |||||||| ||| | ||| ||||| |||||||||||||| Sbjct: 747 tgttatcctgtatccactttcccaccttcgatgtattccttcacttgggtacaagaagtc 688 Query: 440 cagctcaacaacctgttc 457 ||||| || |||||||| Sbjct: 687 aagctccaccacctgttc 670 Score = 42.1 bits (21), Expect = 2.1 Identities = 81/101 (80%) Strand = Plus / Minus Query: 219 ccataacatactgaagcaaggtagagattcttggaccatttctccttcacatgctgactg 278 ||||| |||| ||| |||| ||| ||||| || | |||||||||||| ||||| ||| Sbjct: 908 ccatagcatattgatgcaatgtacagatttttcgcccatttctccttgacatgggtactt 849 Query: 279 gggaaagcagatgttctcagtgtctcttgagtttcatcggt 319 ||||| ||||| || | || |||||||| ||||||||||| Sbjct: 848 gggaaggcagaagtccggagagtctcttgggtttcatcggt 808
>emb|BX825856.1|CNS0A7N4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL68ZE07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 690 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 380 tgttatccggtaaccactgtcccacctcttatggactccctcactagggtacaagaagtc 439 |||||||| ||| ||||| |||||||| ||| | ||| ||||| |||||||||||||| Sbjct: 156 tgttatcctgtatccactttcccaccttcgatgtattccttcacttgggtacaagaagtc 97 Query: 440 cagctcaacaacctgttc 457 ||||| || |||||||| Sbjct: 96 aagctccaccacctgttc 79 Score = 42.1 bits (21), Expect = 2.1 Identities = 81/101 (80%) Strand = Plus / Minus Query: 219 ccataacatactgaagcaaggtagagattcttggaccatttctccttcacatgctgactg 278 ||||| |||| ||| |||| ||| ||||| || | |||||||||||| ||||| ||| Sbjct: 317 ccatagcatattgatgcaatgtacagatttttcgcccatttctccttgacatgggtactt 258 Query: 279 gggaaagcagatgttctcagtgtctcttgagtttcatcggt 319 ||||| ||||| || | || |||||||| ||||||||||| Sbjct: 257 gggaaggcagaagtccggagagtctcttgggtttcatcggt 217
>emb|BX823466.1|CNS0A6MY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 874 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 380 tgttatccggtaaccactgtcccacctcttatggactccctcactagggtacaagaagtc 439 |||||||| ||| ||||| |||||||| ||| | ||| ||||| |||||||||||||| Sbjct: 310 tgttatcctgtatccactttcccaccttcgatgtattccttcacttgggtacaagaagtc 251 Query: 440 cagctcaacaacctgttc 457 ||||| || |||||||| Sbjct: 250 aagctccaccacctgttc 233 Score = 42.1 bits (21), Expect = 2.1 Identities = 81/101 (80%) Strand = Plus / Minus Query: 219 ccataacatactgaagcaaggtagagattcttggaccatttctccttcacatgctgactg 278 ||||| |||| ||| |||| ||| ||||| || | |||||||||||| ||||| ||| Sbjct: 471 ccatagcatattgatgcaatgtacagatttttcgcccatttctccttgacatgggtactt 412 Query: 279 gggaaagcagatgttctcagtgtctcttgagtttcatcggt 319 ||||| ||||| || | || |||||||| ||||||||||| Sbjct: 411 gggaaggcagaagtccggagagtctcttgggtttcatcggt 371
>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695H10 Length = 136883 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 539 ccatttcttgtttatccacttgaagggaaaggtatcacttactttataggactgctgagt 598 |||||||||||| ||||| ||||||||||| | ||||| ||||| || ||||| ||||| Sbjct: 77518 ccatttcttgttgatccatttgaagggaaacgattcactaactttgtaagactgttgagt 77459 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 231 gaagcaaggtagagattcttggaccatttctcct 264 ||||||| ||| |||||||||| ||||||||||| Sbjct: 78214 gaagcaatgtaaagattcttggcccatttctcct 78181
>gb|AY111450.1| Zea mays CL68522_1 mRNA sequence Length = 619 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Minus Query: 213 gtacgcccataacatactgaagcaaggtagagattcttggaccatttctcct 264 ||||| ||||| ||||| || || |||||||||||||| |||||||| |||| Sbjct: 115 gtacgaccatagcataccgatgctaggtagagattcttagaccatttgtcct 64
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 484 caaccgcccatttctttccagc 505 |||||||||||||||||||||| Sbjct: 4637561 caaccgcccatttctttccagc 4637540
>gb|AC009540.6|ATAC009540 Arabidopsis thaliana chromosome III BAC F20H23 genomic sequence, complete sequence Length = 101410 Score = 44.1 bits (22), Expect = 0.52 Identities = 55/66 (83%) Strand = Plus / Minus Query: 380 tgttatccggtaaccactgtcccacctcttatggactccctcactagggtacaagaagtc 439 |||||||| ||| ||||| |||||||| ||| | ||| ||||| |||||||||||||| Sbjct: 2333 tgttatcctgtatccactttcccaccttcgatgtattccttcacttgggtacaagaagtc 2274 Query: 440 cagctc 445 ||||| Sbjct: 2273 aagctc 2268
>gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome III BAC T11I18 genomic sequence, complete sequence Length = 63654 Score = 44.1 bits (22), Expect = 0.52 Identities = 55/66 (83%) Strand = Plus / Plus Query: 380 tgttatccggtaaccactgtcccacctcttatggactccctcactagggtacaagaagtc 439 |||||||| ||| ||||| |||||||| ||| | ||| ||||| |||||||||||||| Sbjct: 11339 tgttatcctgtatccactttcccaccttcgatgtattccttcacttgggtacaagaagtc 11398 Query: 440 cagctc 445 ||||| Sbjct: 11399 aagctc 11404
>gb|AC116712.11| Mus musculus chromosome 1, clone RP23-105A17, complete sequence Length = 179782 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 cttccttcttggtacacttaagatc 347 |||||||||||||| |||||||||| Sbjct: 84346 cttccttcttggtaaacttaagatc 84370
>gb|AC121805.3| Mus musculus BAC clone RP23-443L2 from chromosome 10, complete sequence Length = 194006 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 cataacatactgaagcaaggt 240 ||||||||||||||||||||| Sbjct: 150180 cataacatactgaagcaaggt 150200
>gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete sequence Length = 105353 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 409 tatggactccctcactagggtacaagaagtccagctcaacaacct 453 |||||| ||||||||||||||| | ||| || || |||||||||| Sbjct: 7346 tatggattccctcactagggtagaggaaatcaagttcaacaacct 7390 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 543 ttcttgtttatccacttgaagggaaaggtatcacttactttata 586 |||||||||||||| |||||||| || | || ||||||||||| Sbjct: 8297 ttcttgtttatccatttgaaggggaaagactcgcttactttata 8340
>gb|AC146752.24| Medicago truncatula clone mth2-62d4, complete sequence Length = 130134 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 409 tatggactccctcactagggtacaagaagtccagctcaacaacct 453 |||||| ||||||||||||||| | ||| || || |||||||||| Sbjct: 5011 tatggattccctcactagggtagaggaaatcaagttcaacaacct 4967 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 543 ttcttgtttatccacttgaagggaaaggtatcacttactttata 586 |||||||||||||| |||||||| || | || ||||||||||| Sbjct: 4060 ttcttgtttatccatttgaaggggaaagactcgcttactttata 4017
>gb|AC069220.11| Homo sapiens 3 BAC RP11-115B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157448 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 agagattcttggaccatttct 261 ||||||||||||||||||||| Sbjct: 153400 agagattcttggaccatttct 153420
>gb|AC153485.9| Mus musculus 10 BAC RP23-319B13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213412 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 cataacatactgaagcaaggt 240 ||||||||||||||||||||| Sbjct: 48571 cataacatactgaagcaaggt 48591
>gb|AF302261.1|AF302261 Brassica napus BcNA1 gene, promoter sequence Length = 1752 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 549 tttatccacttgaagggaaaggtatcacttactttataggactgctgag 597 |||||||||||||| ||||| | ||||| ||||| || |||||||||| Sbjct: 486 tttatccacttgaatggaaatgagtcactcactttgtatgactgctgag 438
>emb|AL845536.8| Mouse DNA sequence from clone RP23-311G5 on chromosome 2, complete sequence Length = 179612 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 agagtcacaaaagatttaaca 41 ||||||||||||||||||||| Sbjct: 77129 agagtcacaaaagatttaaca 77109
>gb|AY106527.1| Zea mays PCO139661 mRNA sequence Length = 1156 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 239 gtagagattcttggaccatttctccttcacatg 271 |||||||||||| | |||||||||||| ||||| Sbjct: 814 gtagagattcttcgcccatttctccttgacatg 782
>gb|AC144633.3| Mus musculus BAC clone RP23-26J4 from chromosome 7, complete sequence Length = 223362 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aagtccagctcaacaacctg 454 |||||||||||||||||||| Sbjct: 196507 aagtccagctcaacaacctg 196526
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 tttctttccagcagttgccatgga 517 ||||||| |||||||||||||||| Sbjct: 3328497 tttctttgcagcagttgccatgga 3328520
>ref|XM_391442.1| Gibberella zeae PH-1 chromosome linkage group 14 hypothetical protein (FG11266.1) partial mRNA Length = 2040 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 ctcaacaacctgttcggaaaaccc 466 ||||||||||| |||||||||||| Sbjct: 1980 ctcaacaacctcttcggaaaaccc 1957
>gb|AC119155.6| Mus musculus chromosome 3, clone RP23-43A4, complete sequence Length = 147451 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 agctggatcaaaaagatgaggcta 170 ||||||||||||||| |||||||| Sbjct: 32476 agctggatcaaaaaggtgaggcta 32499
>gb|AC146815.1| Mus musculus BAC clone RP23-239A11 from chromosome 8, complete sequence Length = 203073 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 aagcagatgttctcagtgtc 302 |||||||||||||||||||| Sbjct: 160195 aagcagatgttctcagtgtc 160176
>gb|AC125352.4| Mus musculus BAC clone RP23-451M13 from chromosome 8, complete sequence Length = 203416 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 agcagatgttctcagtgtct 303 |||||||||||||||||||| Sbjct: 182849 agcagatgttctcagtgtct 182868
>gb|AC122021.2| Mus musculus BAC clone RP24-366N1 from 3, complete sequence Length = 186873 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 agctggatcaaaaagatgaggcta 170 ||||||||||||||| |||||||| Sbjct: 141376 agctggatcaaaaaggtgaggcta 141399
>emb|AL160036.12| Human DNA sequence from clone RP11-555C15 on chromosome 13 Contains part of the GPC6 gene for glypican 6, complete sequence Length = 173526 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 tccttcttggtacacttaag 344 |||||||||||||||||||| Sbjct: 108177 tccttcttggtacacttaag 108196
>gb|AC104024.8| Homo sapiens chromosome 17, clone RP11-416I2, complete sequence Length = 97645 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 gaagggaaaggtatcactta 579 |||||||||||||||||||| Sbjct: 95525 gaagggaaaggtatcactta 95544
>gb|AC114648.25| Mus musculus chromosome 8, clone RP24-144H17, complete sequence Length = 171191 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tgctgactggggaaagcaga 289 |||||||||||||||||||| Sbjct: 97562 tgctgactggggaaagcaga 97581
>gb|AC160534.5| Mus musculus chromosome 7, clone RP24-265E12, complete sequence Length = 176921 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 aagtccagctcaacaacctg 454 |||||||||||||||||||| Sbjct: 74381 aagtccagctcaacaacctg 74400
>gb|AC151296.4| Mus musculus BAC clone RP23-127M7 from chromosome 8, complete sequence Length = 210633 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 agcagatgttctcagtgtct 303 |||||||||||||||||||| Sbjct: 41922 agcagatgttctcagtgtct 41941
>gb|AC102298.14| Mus musculus chromosome 7, clone RP24-396N13, complete sequence Length = 187811 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 aagtccagctcaacaacctg 454 |||||||||||||||||||| Sbjct: 75692 aagtccagctcaacaacctg 75673
>dbj|AK045360.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230105K17 product:unclassifiable, full insert sequence Length = 2648 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 agcagatgttctcagtgtct 303 |||||||||||||||||||| Sbjct: 505 agcagatgttctcagtgtct 524
>dbj|AK048553.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130073E24 product:unclassifiable, full insert sequence Length = 3269 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 agcagatgttctcagtgtct 303 |||||||||||||||||||| Sbjct: 3160 agcagatgttctcagtgtct 3179
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 gcaaaagatttctacgatacggta 215 ||||||||||| |||||||||||| Sbjct: 2896277 gcaaaagatttttacgatacggta 2896254
>dbj|AB222991.1| Homo sapiens gene for TACI, complete cds Length = 34320 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 gaagggaaaggtatcactta 579 |||||||||||||||||||| Sbjct: 26373 gaagggaaaggtatcactta 26392
>gb|AY643735.1| Physalis pubescens MPF2 (MPF2) gene, promoter region and complete cds Length = 9448 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 attttctataattaatagcg 90 |||||||||||||||||||| Sbjct: 3904 attttctataattaatagcg 3885
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 ccgcccatttctttccagcagttg 510 ||||||||||||||||||| |||| Sbjct: 1272753 ccgcccatttctttccagcggttg 1272776
>gb|AC101812.19| Mus musculus chromosome 19, clone RP24-309C5, complete sequence Length = 169224 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 atttcttgtttatccacttg 560 |||||||||||||||||||| Sbjct: 38388 atttcttgtttatccacttg 38369
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 ccgcccatttctttccagcagttg 510 ||||||||||||||||||| |||| Sbjct: 1243830 ccgcccatttctttccagcggttg 1243853
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gcaaaagatttctacgatacggta 215 ||||||||||| |||||||||||| Sbjct: 1399977 gcaaaagatttttacgatacggta 1400000
>emb|AL353996.3|HS48J14 Homo sapiens chromosome 17 sequence from PAC RPCI-1 48J14 region D17S842-D17S953 map 17p11.2, complete sequence Length = 105982 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 gaagggaaaggtatcactta 579 |||||||||||||||||||| Sbjct: 4704 gaagggaaaggtatcactta 4723 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,432,642 Number of Sequences: 3902068 Number of extensions: 5432642 Number of successful extensions: 92715 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 92336 Number of HSP's gapped (non-prelim): 371 length of query: 601 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 578 effective length of database: 17,143,297,704 effective search space: 9908826072912 effective search space used: 9908826072912 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
