ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal35i20 |
|---|---|
| Clone Library Name | barley_pub |
>Y4105_ARATH (Q9M158) Putative protein At4g01050| Length = 466 Score = 36.2 bits (82), Expect = 0.074 Identities = 14/48 (29%), Positives = 28/48 (58%) Frame = -1 Query: 521 KGSNIVVMDSYGDNSKIVAKTLNSVGFKNCWVMAGGFSGRKGWAQSRL 378 + + + ++D + NS++VA+ + GFK+ + + G G +GW S L Sbjct: 199 ENTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSL 246
>YDNAA_RICMO (P0A3K3) Hypothetical 14.4 kDa protein in dnaA 5'region| Length = 123 Score = 35.4 bits (80), Expect = 0.13 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%) Frame = -1 Query: 488 GDNSKIVAKTLNSVGFKNCWVMAGGFSGR---KGWAQSRL 378 G S I A + ++G+KNC+ ++ GF G KGW Q+ L Sbjct: 80 GYRSFIAANFITNIGYKNCYNISDGFEGNNQDKGWKQNNL 119
>Y915_RICCN (P0A3K2) Hypothetical protein RC0915| Length = 123 Score = 35.4 bits (80), Expect = 0.13 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%) Frame = -1 Query: 488 GDNSKIVAKTLNSVGFKNCWVMAGGFSGR---KGWAQSRL 378 G S I A + ++G+KNC+ ++ GF G KGW Q+ L Sbjct: 80 GYRSFIAANFITNIGYKNCYNISDGFEGNNQDKGWKQNNL 119
>Y600_RICRI (Q9AKI4) Hypothetical protein RP600 homolog| Length = 123 Score = 35.4 bits (80), Expect = 0.13 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%) Frame = -1 Query: 488 GDNSKIVAKTLNSVGFKNCWVMAGGFSGR---KGWAQSRL 378 G S I A + ++G+KNC+ ++ GF G KGW Q+ L Sbjct: 80 GYRSFIAANFITNIGYKNCYNISDGFEGNNQDKGWKQNNL 119
>RT31_MOUSE (Q61733) 28S ribosomal protein S31, mitochondrial precursor (S31mt)| (MRP-S31) (Imogen 38) Length = 384 Score = 34.7 bits (78), Expect = 0.22 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = +1 Query: 406 PENPPAMTQQFLNPTLLSVLATIFELSPYESMTTMLEPLPILLRYE 543 PE+PP +FL+P L++ + + + P++ TT E L L ++E Sbjct: 129 PEDPPKKRNEFLSPELVAAASAVADSLPFDKQTTKSELLRQLQQHE 174
>Y600_RICPR (Q9ZCV8) Hypothetical protein RP600| Length = 123 Score = 34.7 bits (78), Expect = 0.22 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%) Frame = -1 Query: 488 GDNSKIVAKTLNSVGFKNCWVMAGGFSGR---KGWAQSRL 378 G S I A + ++G+KNC+ ++ GF G KGW Q+ L Sbjct: 80 GYRSFIAANFIANIGYKNCYNISDGFEGNNQDKGWKQNNL 119
>AAC6_ENTAE (P50858) Aminoglycoside N(6')-acetyltransferase type 1 (EC| 2.3.1.82) (AAC(6')) Length = 152 Score = 33.1 bits (74), Expect = 0.63 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = +3 Query: 318 RNHPRRLDDFYNGKVVGIRPKAALRPPFPAGESAGHDPAVLEPHAVECLGHNL 476 + H + +F +GKV RP A L P GE+ G + P+A EC N+ Sbjct: 32 QEHQSEIAEFLSGKVA--RPAAVLIAVAPDGEALGFAELSIRPYAEECYSGNV 82
>GLPE_HAEIN (P44819) Thiosulfate sulfurtransferase glpE (EC 2.8.1.1)| Length = 105 Score = 32.7 bits (73), Expect = 0.82 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = -1 Query: 515 SNIVVMDSYGDNSKIVAKTLNSVGFKNCWVMAGGFSGRKGWAQSRLGTDS 366 S I+V +G +S+ VA L G+KN + M GGF GW ++ L D+ Sbjct: 57 SPIIVSCYHGVSSRNVATFLVEQGYKNVFSMIGGFD---GWCRAELPIDT 103
>GPR44_HUMAN (Q9Y5Y4) Putative G-protein coupled receptor 44 (Chemoattractant| receptor-homologous molecule expressed on Th2 cells) (CD294 antigen) Length = 395 Score = 32.0 bits (71), Expect = 1.4 Identities = 24/56 (42%), Positives = 28/56 (50%) Frame = +1 Query: 250 RSLRVVLEGVEVDDTVTNLSAAAGITRDGLMTSTTERL*ESVPRRLCAHPFRPENP 417 RSLR VLE V VDD + L A R TS+T R + P LC+ P P P Sbjct: 317 RSLRTVLESVLVDD--SELGGAGSSRR--RRTSSTAR--SASPLALCSRPEEPRGP 366
>UBA4_YEAST (P38820) E1-like URM1 activator protein (Ubiquitin-like protein| activator 4) Length = 440 Score = 30.4 bits (67), Expect = 4.1 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Frame = -1 Query: 536 LKRIGKGSNIVVMDSYGDNSKIVAKTL-NSVGFKNCWVMAGGF 411 L + K SNIV++ YG++S++ + L + GF N + GG+ Sbjct: 384 LPSVEKDSNIVILCRYGNDSQLATRLLKDKFGFSNVRDVRGGY 426
>OPGH_SHIFL (P62519) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)| Length = 847 Score = 29.3 bits (64), Expect = 9.1 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -1 Query: 434 CWVMAGGFSGRKGWAQSRLGTDSYNLSVVEV 342 CWV AG ++ G+ Q +G D Y++S V Sbjct: 203 CWVSAGFWTALMGFLQLLIGRDKYSISASTV 233
>OPGH_SALTY (Q8ZQ26) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)| Length = 847 Score = 29.3 bits (64), Expect = 9.1 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -1 Query: 434 CWVMAGGFSGRKGWAQSRLGTDSYNLSVVEV 342 CWV AG ++ G+ Q +G D Y++S V Sbjct: 203 CWVSAGFWTALMGFLQLLIGRDKYSISASTV 233
>OPGH_SALTI (Q8Z7L8) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)| Length = 847 Score = 29.3 bits (64), Expect = 9.1 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -1 Query: 434 CWVMAGGFSGRKGWAQSRLGTDSYNLSVVEV 342 CWV AG ++ G+ Q +G D Y++S V Sbjct: 203 CWVSAGFWTALMGFLQLLIGRDKYSISASTV 233
>OPGH_ECOLI (P62517) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)| Length = 847 Score = 29.3 bits (64), Expect = 9.1 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -1 Query: 434 CWVMAGGFSGRKGWAQSRLGTDSYNLSVVEV 342 CWV AG ++ G+ Q +G D Y++S V Sbjct: 203 CWVSAGFWTALMGFLQLLIGRDKYSISASTV 233
>OPGH_ECOL6 (Q8FIS3) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)| Length = 847 Score = 29.3 bits (64), Expect = 9.1 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -1 Query: 434 CWVMAGGFSGRKGWAQSRLGTDSYNLSVVEV 342 CWV AG ++ G+ Q +G D Y++S V Sbjct: 203 CWVSAGFWTALMGFLQLLIGRDKYSISASTV 233
>OPGH_ECO57 (P62518) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)| Length = 847 Score = 29.3 bits (64), Expect = 9.1 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -1 Query: 434 CWVMAGGFSGRKGWAQSRLGTDSYNLSVVEV 342 CWV AG ++ G+ Q +G D Y++S V Sbjct: 203 CWVSAGFWTALMGFLQLLIGRDKYSISASTV 233 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,466,108 Number of Sequences: 219361 Number of extensions: 1490269 Number of successful extensions: 4758 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 4603 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4749 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
