ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal35i11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SGS3_DROME (P02840) Salivary glue protein Sgs-3 precursor 35 0.17
2IF2_SYNP6 (Q5N0A5) Translation initiation factor IF-2 34 0.30
3Y1332_METJA (Q58728) Hypothetical GTP-binding protein MJ1332 32 1.5
4IF2_OCEIH (Q8EQU1) Translation initiation factor IF-2 31 2.5
5IF2_CARHZ (Q3AB98) Translation initiation factor IF-2 31 2.5
6EFG1_GEOSL (Q74A61) Elongation factor G 1 (EF-G 1) 31 3.3
7FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1 31 3.3
8IF2_HELPY (P55972) Translation initiation factor IF-2 30 4.3
9IF2_HELPJ (Q9ZM46) Translation initiation factor IF-2 30 4.3
10MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2) 30 4.3
11IF2_ZYMMO (Q5NQ27) Translation initiation factor IF-2 30 5.6
12NOS1_ARATH (Q66GP9) Nitric-oxide synthase 1 (EC 1.14.13.39) (AtN... 30 5.6
13IF2_PROMM (Q7V5M4) Translation initiation factor IF-2 30 5.6
14MUC1_YEAST (P08640) Mucin-like protein 1 precursor 30 5.6
15IF2_RHOS4 (Q3IYN5) Translation initiation factor IF-2 30 5.6
16FTSK_SHEON (Q8EER3) DNA translocase ftsK 30 7.3
17MOAC_RALSO (Q8Y1X7) Molybdenum cofactor biosynthesis protein C 30 7.3
18IF2_XYLFA (Q9PGR3) Translation initiation factor IF-2 30 7.3
19IF2_SYNEL (Q8DK04) Translation initiation factor IF-2 29 9.6
20IF2_NEIMB (Q9JYD2) Translation initiation factor IF-2 29 9.6
21IF2_LACSS (Q38W81) Translation initiation factor IF-2 29 9.6
22IF2_LISMO (Q8Y7F6) Translation initiation factor IF-2 29 9.6
23SYV_SYNP6 (Q5N3J4) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... 29 9.6
24IL17_BOVIN (Q687Y7) Interleukin-17A precursor (IL-17A) (IL-17) 29 9.6
25MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronc... 29 9.6
26IF2_LISMF (Q71ZZ7) Translation initiation factor IF-2 29 9.6
27IF2_LISIN (Q92C29) Translation initiation factor IF-2 29 9.6
28IF2_BACSU (P17889) Translation initiation factor IF-2 29 9.6
29DAN4_YEAST (P47179) Cell wall protein DAN4 precursor 29 9.6
30IF2_XYLFT (Q87EV4) Translation initiation factor IF-2 29 9.6

>SGS3_DROME (P02840) Salivary glue protein Sgs-3 precursor|
          Length = 307

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 18/70 (25%), Positives = 28/70 (40%)
 Frame = +1

Query: 181 PPWLTPTALTSTCCRPPLSGWTTTVACASSSRPSLPSRDADSAPTMXXXXXXXXXXXPSV 360
           PP  T T  T+T C PP    TT   C ++S+P+ P +     P             P+ 
Sbjct: 42  PPCTTTTTTTTTTCAPPTQQSTTQPPC-TTSKPTTPKQTTTQLPCTTPTTTKATTTKPTT 100

Query: 361 WEMISQSSLT 390
            +  +  + T
Sbjct: 101 TKATTTKATT 110



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>IF2_SYNP6 (Q5N0A5) Translation initiation factor IF-2|
          Length = 1030

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = -2

Query: 413 EKRGDVTSVREDWEIISHTDGDEAKRPAELPAMVGALSASREGKDGLLDEAQATVVVHPE 234
           E+  + +  R+  +++   D +  +    LP +V A+     GK  LLD  + T V   E
Sbjct: 497 EQETEESGARKTTQMVEDADAESLQT---LPPVVTAMGHVDHGKTTLLDAIRKTRVAAGE 553

Query: 233 SGG-RQHVEVRAVGVSHGG 180
           +GG  QH+    V V H G
Sbjct: 554 AGGITQHIGAYHVDVEHNG 572



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>Y1332_METJA (Q58728) Hypothetical GTP-binding protein MJ1332|
          Length = 393

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = -2

Query: 458 DYVILPTIYEIE---KHHEKRGDVTSVREDWEIISHTDGDEAKRPA 330
           DY+++PT  EIE   K  EK G +     D+EII  +  +E  R A
Sbjct: 240 DYIVIPTSAEIELALKRAEKAGIIKRKENDFEIIDESKVNEQMRRA 285



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>IF2_OCEIH (Q8EQU1) Translation initiation factor IF-2|
          Length = 692

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -2

Query: 389 VREDWEIISHTDGDEAKRPAELPAMVGALSASREGKDGLLDEAQATVVVHPESGG-RQHV 213
           + ED ++  + + D  +   E PA+V  +     GK  LLD  + T V   E+GG  QH+
Sbjct: 173 ILEDTDLDKYIEEDAEENLQERPAVVTIMGHVDHGKTTLLDSIRHTKVTAGEAGGITQHI 232



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>IF2_CARHZ (Q3AB98) Translation initiation factor IF-2|
          Length = 827

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
 Frame = -2

Query: 434 YEIEKHHEKRGDVTSVREDWEIISHTDGDEAKRPAELPAMVGALSASREGKDGLLDEAQA 255
           YE+    E++ D+      W +    D  E+  P   P +V  +     GK  LLD  + 
Sbjct: 299 YEVTVEKEEKEDI------WLLEETPDDPESLEPR--PPIVTVMGHVDHGKTSLLDAIRQ 350

Query: 254 TVVVHPESGG-RQHVEVRAVGVSHGG 180
           T V   E+GG  QH  + A  V H G
Sbjct: 351 TNVTATEAGGITQH--IGAYQVEHNG 374



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>EFG1_GEOSL (Q74A61) Elongation factor G 1 (EF-G 1)|
          Length = 689

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 374 EIISHTDGDEAKRPAELPAMVGALSASREGKDGLLDEA 261
           E+I+  DGD+ +  +  P     L A+REG+D + + A
Sbjct: 181 ELITFADGDQGRTVSRGPVPADLLDAAREGRDAVAEAA 218



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>FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1|
          Length = 959

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 551 HRGIVCDHHVFRIVQHWLHAGEPD 480
           H   V D  V R+V+HW   GEP+
Sbjct: 845 HGAFVADEEVHRVVEHWKQFGEPE 868



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>IF2_HELPY (P55972) Translation initiation factor IF-2|
          Length = 944

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = -2

Query: 461 NDYVILPTIYEIEKHHEKRGDVTSVREDWEIISHTDGDEAKRPAELPAMVGALSASREGK 282
           ND++   +I  + +       V +  E++E+    +G + +RP     +V  +     GK
Sbjct: 403 NDFLDKDSIEILAEEFHLEISVQNTLEEFEVEEVLEGVKKERPP----VVTIMGHVDHGK 458

Query: 281 DGLLDEAQATVVVHPESGG-RQHV 213
             LLD+ +   V H E+GG  QH+
Sbjct: 459 TSLLDKIRDKRVAHTEAGGITQHI 482



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>IF2_HELPJ (Q9ZM46) Translation initiation factor IF-2|
          Length = 949

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = -2

Query: 461 NDYVILPTIYEIEKHHEKRGDVTSVREDWEIISHTDGDEAKRPAELPAMVGALSASREGK 282
           ND++   +I  + +       V +  E++E+    +G + +RP     +V  +     GK
Sbjct: 408 NDFLDKDSIEILAEEFHLEISVQNTLEEFEVEEVLEGVKKERPP----VVTIMGHVDHGK 463

Query: 281 DGLLDEAQATVVVHPESGG-RQHV 213
             LLD+ +   V H E+GG  QH+
Sbjct: 464 TSLLDKIRDKRVAHTEAGGITQHI 487



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>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 22/75 (29%), Positives = 28/75 (37%)
 Frame = +1

Query: 181  PPWLTPTALTSTCCRPPLSGWTTTVACASSSRPSLPSRDADSAPTMXXXXXXXXXXXPSV 360
            PP  TP+  T+T   PP+   TTT     ++ PS P     S PT             S 
Sbjct: 1652 PPTTTPSPPTTTTPSPPI---TTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSP 1708

Query: 361  WEMISQSSLTDVTSP 405
                +  S T   SP
Sbjct: 1709 ITTTTTPSSTTTPSP 1723



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>IF2_ZYMMO (Q5NQ27) Translation initiation factor IF-2|
          Length = 989

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -2

Query: 380 DWEIISHTDGDEAKRPAELPAMVGALSASREGKDGLLDEAQATVVVHPESGG-RQHV 213
           D EI S +D D  +     P +V  +     GK  LLD  + + VV  E+GG  QH+
Sbjct: 472 DVEIDSSSDVDPEETLKSRPPVVTIMGHVDHGKTSLLDALRGSDVVRGEAGGITQHI 528



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>NOS1_ARATH (Q66GP9) Nitric-oxide synthase 1 (EC 1.14.13.39) (AtNOS1)|
          Length = 561

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 24/83 (28%), Positives = 34/83 (40%)
 Frame = +3

Query: 189 ADSNSPDFHMLPASALRVDHHSGLRLVQQAILTLTRCRQRTNHGGELGRSFGLVAVSVGD 368
           +D +SP F  L    L+  HH    ++      L+     T  GG  G   G   VS  +
Sbjct: 118 SDVDSPGFVDLVTYELKKKHHQLRTMICGRCQLLSHGHMITAVGGNGGYPGGKQFVSADE 177

Query: 369 DLPVLPHRRDVATFLVVLLDLVD 437
               L H R     +V L+D+VD
Sbjct: 178 LREKLSHLRHEKALIVKLVDIVD 200



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>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2|
          Length = 1125

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = -2

Query: 392 SVREDWEIISHTDGDEAKRPAELPAMVGALSASREGKDGLLDEAQATVVVHPESGG-RQH 216
           + ++  E+I  TD     R    P +V  +     GK  LLD  +   V   E+GG  QH
Sbjct: 598 AAKKTTEMIEETDLAHLIRR---PPVVTVMGHVDHGKTSLLDAIRKARVAAVEAGGITQH 654

Query: 215 VEVRAVGVSHGG 180
           +    V + HGG
Sbjct: 655 IGAYQVEIDHGG 666



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>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 20/73 (27%), Positives = 31/73 (42%)
 Frame = +1

Query: 184 PWLTPTALTSTCCRPPLSGWTTTVACASSSRPSLPSRDADSAPTMXXXXXXXXXXXPSVW 363
           P  + T  +S+   P  S  TT  + A +  PS  + ++ SAP             P+  
Sbjct: 499 PVTSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPTPS 558

Query: 364 EMISQSSLTDVTS 402
              ++SS T VTS
Sbjct: 559 SSTTESSSTPVTS 571



 Score = 29.6 bits (65), Expect = 7.3
 Identities = 19/77 (24%), Positives = 31/77 (40%)
 Frame = +1

Query: 184 PWLTPTALTSTCCRPPLSGWTTTVACASSSRPSLPSRDADSAPTMXXXXXXXXXXXPSVW 363
           P  TP++ T+     P++  TT  + A    PS  + ++ SAP               V 
Sbjct: 484 PVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPAPTPSSSTTESSSAPVT 543

Query: 364 EMISQSSLTDVTSPRFS 414
              ++SS   V +P  S
Sbjct: 544 SSTTESSSAPVPTPSSS 560



 Score = 29.3 bits (64), Expect = 9.6
 Identities = 18/77 (23%), Positives = 31/77 (40%)
 Frame = +1

Query: 184 PWLTPTALTSTCCRPPLSGWTTTVACASSSRPSLPSRDADSAPTMXXXXXXXXXXXPSVW 363
           P  TP++ T+     P++  TT  + A    PS  + ++ SAP             P+  
Sbjct: 457 PVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPS 516

Query: 364 EMISQSSLTDVTSPRFS 414
              ++SS     +P  S
Sbjct: 517 SSTTESSSAPAPTPSSS 533



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>IF2_RHOS4 (Q3IYN5) Translation initiation factor IF-2|
          Length = 836

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
 Frame = -2

Query: 380 DWEIISHTDGDEAKRPAELPAMVGALSASREGKDGLLDEAQATVVVHPESGG-RQHVEVR 204
           D E +  T  D+A+     P ++  +     GK  LLD  + T VV  E+GG  QH+   
Sbjct: 316 DVEHVIDTVEDKAEDLQPRPPIITIMGHVDHGKTSLLDAIRKTSVVSGEAGGITQHIGAY 375

Query: 203 AVGVSHGG*LRGLLQYLSS*GDCTYCKPLMHIRCGQV 93
            V    G     +L +L + G   +    M  R  QV
Sbjct: 376 QVKTESG----AVLTFLDTPGHAAFTS--MRARGAQV 406



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>FTSK_SHEON (Q8EER3) DNA translocase ftsK|
          Length = 911

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 19/111 (17%)
 Frame = -2

Query: 551  HRGIVCDHHVFRIVQHWLHAGEPDPFYDPLN-----DYVILP--TIYEIEKH-------- 417
            H   + DH V R+V  W   G+P    + LN     + V+LP  T    E++        
Sbjct: 794  HGAFIDDHEVHRVVADWCARGKPQYIDEILNGVSEGEQVLLPGETAESDEEYDPLYDEAV 853

Query: 416  ----HEKRGDVTSVREDWEIISHTDGDEAKRPAELPAMVGALSASREGKDG 276
                  +RG ++SV+  ++I      + A R  E   M G +SA  +G +G
Sbjct: 854  AFVTETRRGSISSVQRKFKI----GYNRAARIIEQMEMQGVVSA--QGHNG 898



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>MOAC_RALSO (Q8Y1X7) Molybdenum cofactor biosynthesis protein C|
          Length = 158

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
 Frame = -2

Query: 449 ILPTIYEIEKHHE-KRGDVTSVREDWEIISHTDGDEAKRPAELPAMVGALSASREGKDGL 273
           +LPT + + +    K+GDV  +      I+   G  AKR ++L  +   L+ ++   D  
Sbjct: 36  MLPTTFALVRDGTAKKGDVLGIAR----IAAIQG--AKRTSDLIPLCHPLALTKVAVDFE 89

Query: 272 LDEAQATV--VVHPESGGRQHVEVRAV 198
           LDEA  TV   V  E+ G+  VE+ A+
Sbjct: 90  LDEADRTVRCTVRAETHGQTGVEMEAL 116



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>IF2_XYLFA (Q9PGR3) Translation initiation factor IF-2|
          Length = 892

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = -2

Query: 371 IISHTDGDEAKRPAELPAMVGALSASREGKDGLLDEAQATVVVHPESGG-RQHVEVRAVG 195
           +++HT+    + P   P +V  +     GK  LLD  + T +   E+GG  QH     +G
Sbjct: 378 LLAHTEEVHGE-PVPRPPVVTIMGHVDHGKTSLLDYIRRTKIAVGEAGGITQH-----IG 431

Query: 194 VSHGG*LRGLLQYLSS*GDCTY 129
             H    RG++ +L + G   +
Sbjct: 432 AYHVETPRGVISFLDTPGHAAF 453



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>IF2_SYNEL (Q8DK04) Translation initiation factor IF-2|
          Length = 957

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = -2

Query: 374 EIISHTDGDEAKRPAELPAMVGALSASREGKDGLLDEAQATVVVHPESGG-RQHVEVRAV 198
           E++  +D D  +R   +  ++G +     GK  LLD  +   V   E+GG  QH+    V
Sbjct: 432 EMLESSDLDHLQRRPPVVTIMGHVD---HGKTTLLDAIRNAKVAQGEAGGITQHIGAYHV 488

Query: 197 GVSHGG 180
            V H G
Sbjct: 489 DVEHNG 494



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>IF2_NEIMB (Q9JYD2) Translation initiation factor IF-2|
          Length = 962

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
 Frame = -2

Query: 356 DGDEAKRPAELPA--MVGALSASREGKDGLLDEAQATVVVHPESGG-RQHVEVRAVGVSH 186
           +G EA     LP   +V  +     GK  LLD  + T VV  E+GG  QH     +G  H
Sbjct: 451 EGAEAVEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQH-----IGAYH 505

Query: 185 GG*LRGLLQYLSS*G 141
               RG++ +L + G
Sbjct: 506 VETPRGVITFLDTPG 520



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>IF2_LACSS (Q38W81) Translation initiation factor IF-2|
          Length = 937

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
 Frame = -2

Query: 449 ILPTIYEIEKHHEKRGDVTSVREDWEIISHTDGDEAKRPAELPAMVGALSASREGKDGLL 270
           +L T Y IE   +   D+  +   +E  + +D +   RP     +V  +     GK  LL
Sbjct: 402 LLATDYGIEAEQKVEVDIADIDSVFETEAKSDANLVSRPP----VVTIMGHVDHGKTTLL 457

Query: 269 DEAQATVVVHPESGG-RQHV 213
           D  + + V   E+GG  QH+
Sbjct: 458 DNLRNSHVTDGEAGGITQHI 477



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>IF2_LISMO (Q8Y7F6) Translation initiation factor IF-2|
          Length = 779

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = -2

Query: 434 YEIEKHHEKRGDVTSVREDWEIISHTDGDEAKRPAELPAMVGALSASREGKDGLLDEAQA 255
           Y ++   E + DVT +   +E   +   DE+K   E P +V  +     GK  LLD  + 
Sbjct: 246 YGVQVEEEIKVDVTDLDVYFENELNEAVDESKL-VERPPVVTIMGHVDHGKTTLLDSLRN 304

Query: 254 TVVVHPESGG-RQHV 213
           T V   E+GG  QH+
Sbjct: 305 TKVTLGEAGGITQHI 319



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>SYV_SYNP6 (Q5N3J4) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 909

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
 Frame = +1

Query: 517 RNTWWSHTIPRWSAA--TPILATASRPSAFADSA 612
           R  WW H IP W A   T  + T S P   A SA
Sbjct: 410 RQLWWGHQIPAWYAVSETNGVVTDSTPFVVAKSA 443



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>IL17_BOVIN (Q687Y7) Interleukin-17A precursor (IL-17A) (IL-17)|
          Length = 153

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +3

Query: 237 RVDHHSGLRLVQQAILTLTRCRQRTNHGGELGRSFGLVAVSVGDDLPVLPH 389
           +VDHH     +QQ IL L R  Q   H   L +   LVAV      P++ H
Sbjct: 103 KVDHHMNSVTIQQEILVLRRESQHCPHSFRLEKM--LVAVGCTCVTPIVRH 151



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>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)|
           (Tracheobronchial mucin) (TBM) (Major airway
           glycoprotein) (Fragment)
          Length = 1233

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +1

Query: 160 CNRPRS*PPWLTPTALTSTCCRPPLSGWTTTVACASSSRPSLPS 291
           C+RP   P  + PT + ST   P   G +TTV   +   P LPS
Sbjct: 681 CHRPHPTPTTVGPTTVGSTTVGPTTVG-STTVGPTTPPAPCLPS 723



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>IF2_LISMF (Q71ZZ7) Translation initiation factor IF-2|
          Length = 782

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = -2

Query: 434 YEIEKHHEKRGDVTSVREDWEIISHTDGDEAKRPAELPAMVGALSASREGKDGLLDEAQA 255
           Y ++   E + DVT +   +E   +   DE+K   E P +V  +     GK  LLD  + 
Sbjct: 249 YGVQVEEEIKVDVTDLDVYFENELNEAVDESKL-VERPPVVTIMGHVDHGKTTLLDSLRN 307

Query: 254 TVVVHPESGG-RQHV 213
           T V   E+GG  QH+
Sbjct: 308 TKVTLGEAGGITQHI 322



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>IF2_LISIN (Q92C29) Translation initiation factor IF-2|
          Length = 782

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = -2

Query: 434 YEIEKHHEKRGDVTSVREDWEIISHTDGDEAKRPAELPAMVGALSASREGKDGLLDEAQA 255
           Y ++   E + DVT +   +E   +   DE+K   E P +V  +     GK  LLD  + 
Sbjct: 249 YGVQVEEEIKVDVTDLDVYFENELNEAVDESKL-VERPPVVTIMGHVDHGKTTLLDSLRN 307

Query: 254 TVVVHPESGG-RQHV 213
           T V   E+GG  QH+
Sbjct: 308 TKVTLGEAGGITQHI 322



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>IF2_BACSU (P17889) Translation initiation factor IF-2|
          Length = 716

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = -2

Query: 464 LNDYVILPTIYEIEKHHEKRGDVTSVREDWEIISHTDGDEAKRPAELPAMVGALSASREG 285
           +N  +   TI  I   +    +   V E+ E+  + + D  +     P +V  +     G
Sbjct: 172 INQELDKDTIELIASEYGVETEEVIVLEETELEKYEEPDNEEDLEIRPPVVTIMGHVDHG 231

Query: 284 KDGLLDEAQATVVVHPESGG-RQHV 213
           K  LLD  + T VV  E+GG  QH+
Sbjct: 232 KTTLLDSIRKTKVVEGEAGGITQHI 256



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>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor|
          Length = 1161

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 29/142 (20%), Positives = 44/142 (30%)
 Frame = +1

Query: 184 PWLTPTALTSTCCRPPLSGWTTTVACASSSRPSLPSRDADSAPTMXXXXXXXXXXXPSVW 363
           P  T T+ TST    P +  T+T    S++  +  +    + PT             S  
Sbjct: 138 PTTTITSTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTT 197

Query: 364 EMISQSSLTDVTSPRFSWCFSIS*MVGRMT*SLRXXXXXXXXPACSQCWTMRNTWWSHTI 543
              S +S T  TS                T +          P  S   T   T    T 
Sbjct: 198 PTTSTTSTTPTTSTT---------STTPTTSTTSTTPTTSTTPTTSTTSTTSQTSTKSTT 248

Query: 544 PRWSAATPILATASRPSAFADS 609
           P  S+ +    T++ P+    S
Sbjct: 249 PTTSSTSTTPTTSTTPTTSTTS 270



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>IF2_XYLFT (Q87EV4) Translation initiation factor IF-2|
          Length = 892

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = -2

Query: 371 IISHTDGDEAKRPAELPAMVGALSASREGKDGLLDEAQATVVVHPESGG-RQHVEVRAVG 195
           +++HT+    + P   P +V  +     GK  LLD  + T +   E+GG  QH     +G
Sbjct: 378 LLAHTEELHGE-PVPRPPVVTIMGHVDHGKTSLLDYIRRTKIAVGEAGGITQH-----IG 431

Query: 194 VSHGG*LRGLLQYLSS*GDCTY 129
             H    RG++ +L + G   +
Sbjct: 432 AYHVETPRGVISFLDTPGHAAF 453


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,018,507
Number of Sequences: 219361
Number of extensions: 1894698
Number of successful extensions: 6511
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6501
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5538924943
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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