>TOP1_ARATH (P30181) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
          Length = 916

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -3

Query: 219 ASPRAANVLSPRAAEL*RCVSCCAHGASYSASSRATVTSG 100
           A P+A NV+SPR+  + +        + YS SS+++ +SG
Sbjct: 326 AKPKARNVVSPRSRAMTKNTKKVTKDSKYSTSSKSSPSSG 365

>SOX12_HUMAN (O15370) SOX-12 protein (SOX-22 protein)|
          Length = 315

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 330 GAVRPTVRLSSTTRRCWRC-YSTPR 401
           G  RP   + +TTR CW+C +S PR
Sbjct: 158 GRRRPRTTMKTTTRSCWKCAWSRPR 182

>YG1C_YEAST (P53211) Hypothetical 11.9 kDa protein in MSB2-UGA1 intergenic|
           region
          Length = 109

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -2

Query: 145 WSILQCQLPSNCNFWSSAASCRFLYTTLI*LSAFGLCL 32
           WS+  C L S  +FW  A    FLY  L+ L     CL
Sbjct: 66  WSLSSCLLVSEVSFWPGAG---FLYNDLVCLDREDHCL 100


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,771,781
Number of Sequences: 219361
Number of extensions: 1015793
Number of successful extensions: 2772
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2772
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)