| Clone Name | rbaal35i06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete seq... | 54 | 2e-04 | 2 | emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... | 40 | 2.8 | 3 | gb|AC068629.35| Homo sapiens 12 BAC RP11-162A11 (Roswell Park Ca... | 40 | 2.8 | 4 | gb|AC114488.3| Homo sapiens chromosome 1 clone RP11-73M7, comple... | 40 | 2.8 |
|---|
>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence Length = 127914 Score = 54.0 bits (27), Expect = 2e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 161 gcctggatggacgtgggctgtatgacggcgtccagctcggccctcat 207 |||||||||||||||||||| |||| || |||||| |||| |||||| Sbjct: 12379 gcctggatggacgtgggctggatgatggagtccaggtcggacctcat 12333
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 gacggcgtccagctcggccc 203 |||||||||||||||||||| Sbjct: 184961 gacggcgtccagctcggccc 184942
>gb|AC068629.35| Homo sapiens 12 BAC RP11-162A11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191117 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tggatggacgtgggctgtat 183 |||||||||||||||||||| Sbjct: 114411 tggatggacgtgggctgtat 114392
>gb|AC114488.3| Homo sapiens chromosome 1 clone RP11-73M7, complete sequence Length = 184854 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tggatggacgtgggctgtat 183 |||||||||||||||||||| Sbjct: 142422 tggatggacgtgggctgtat 142403 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,430,419 Number of Sequences: 3902068 Number of extensions: 1430419 Number of successful extensions: 70349 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70335 Number of HSP's gapped (non-prelim): 14 length of query: 218 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 196 effective length of database: 17,147,199,772 effective search space: 3360851155312 effective search space used: 3360851155312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)