ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal35g08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK101230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031H21, full insert sequence Length = 2739 Score = 442 bits (223), Expect = e-121 Identities = 343/383 (89%) Strand = Plus / Minus Query: 241 cctcattgcaaaggaagatccttgtgggtgtacacaactcccttgtctccgttcactact 300 ||||| |||||||| || ||| |||||||||| |||||||||||||| |||||||||||| Sbjct: 2400 cctcactgcaaagggagctccctgtgggtgtaaacaactcccttgtcgccgttcactact 2341 Query: 301 tgtccactccctcgtagaatgcaccgagtggttagaagaccgtcgacaccaacaggtcca 360 |||||||| ||||||| |||||| ||||| ||||| || || || || |||||||| || Sbjct: 2340 tgtccacttcctcgtaaaatgcatcgagttgttaggagtccatcaacgccaacaggcccc 2281 Query: 361 cgggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccgaagcgagtccca 420 || |||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| Sbjct: 2280 cgagcatgtatgcgccctgtgcttatgccaacctcagcacctagaccaaagcgagcccca 2221 Query: 421 tcacagaaccttgtgcttgcattatggaacacagcagcactatcaacttgttgtaggaaa 480 |||||||||| |||||||||||||||||| || ||||||||||||||||| ||||| ||| Sbjct: 2220 tcacagaaccgtgtgcttgcattatggaataccgcagcactatcaacttgctgtagaaaa 2161 Query: 481 gtatctgctgacttcttatcggttgtgataatacaatctgtgtgtgcacttccataacga 540 || ||||||| ||| ||| || |||||||| ||||||||||||||||||||||| ||| Sbjct: 2160 gtctctgctgcctttccatcagtagtgataatgcaatctgtgtgtgcacttccatagcga 2101 Query: 541 tttatatggtcaattgctgactgtatatcatcaacaaattcgagcgtgcatgccattgag 600 ||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||| Sbjct: 2100 tttatatggtcaattgctgactgcacatcatcaacaaattcgagggtgcatgccattgag 2041 Query: 601 ctatactcatgaagaaatgaatc 623 ||||||||||| |||||||||| Sbjct: 2040 ttatactcatgatgaaatgaatc 2018
>dbj|AK069425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019K03, full insert sequence Length = 3386 Score = 442 bits (223), Expect = e-121 Identities = 343/383 (89%) Strand = Plus / Minus Query: 241 cctcattgcaaaggaagatccttgtgggtgtacacaactcccttgtctccgttcactact 300 ||||| |||||||| || ||| |||||||||| |||||||||||||| |||||||||||| Sbjct: 2344 cctcactgcaaagggagctccctgtgggtgtaaacaactcccttgtcgccgttcactact 2285 Query: 301 tgtccactccctcgtagaatgcaccgagtggttagaagaccgtcgacaccaacaggtcca 360 |||||||| ||||||| |||||| ||||| ||||| || || || || |||||||| || Sbjct: 2284 tgtccacttcctcgtaaaatgcatcgagttgttaggagtccatcaacgccaacaggcccc 2225 Query: 361 cgggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccgaagcgagtccca 420 || |||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| Sbjct: 2224 cgagcatgtatgcgccctgtgcttatgccaacctcagcacctagaccaaagcgagcccca 2165 Query: 421 tcacagaaccttgtgcttgcattatggaacacagcagcactatcaacttgttgtaggaaa 480 |||||||||| |||||||||||||||||| || ||||||||||||||||| ||||| ||| Sbjct: 2164 tcacagaaccgtgtgcttgcattatggaataccgcagcactatcaacttgctgtagaaaa 2105 Query: 481 gtatctgctgacttcttatcggttgtgataatacaatctgtgtgtgcacttccataacga 540 || ||||||| ||| ||| || |||||||| ||||||||||||||||||||||| ||| Sbjct: 2104 gtctctgctgcctttccatcagtagtgataatgcaatctgtgtgtgcacttccatagcga 2045 Query: 541 tttatatggtcaattgctgactgtatatcatcaacaaattcgagcgtgcatgccattgag 600 ||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||| Sbjct: 2044 tttatatggtcaattgctgactgcacatcatcaacaaattcgagggtgcatgccattgag 1985 Query: 601 ctatactcatgaagaaatgaatc 623 ||||||||||| |||||||||| Sbjct: 1984 ttatactcatgatgaaatgaatc 1962
>ref|NM_190603.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2208 Score = 438 bits (221), Expect = e-119 Identities = 338/377 (89%) Strand = Plus / Minus Query: 247 tgcaaaggaagatccttgtgggtgtacacaactcccttgtctccgttcactacttgtcca 306 |||||||| || ||| |||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 2204 tgcaaagggagctccctgtgggtgtaaacaactcccttgtcgccgttcactacttgtcca 2145 Query: 307 ctccctcgtagaatgcaccgagtggttagaagaccgtcgacaccaacaggtccacgggca 366 || ||||||| |||||| ||||| ||||| || || || || |||||||| || || ||| Sbjct: 2144 cttcctcgtaaaatgcatcgagttgttaggagtccatcaacgccaacaggcccccgagca 2085 Query: 367 tgtatgcgccctgtgcttatgccaacctctgcacctagaccgaagcgagtcccatcacag 426 ||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||| Sbjct: 2084 tgtatgcgccctgtgcttatgccaacctcagcacctagaccaaagcgagccccatcacag 2025 Query: 427 aaccttgtgcttgcattatggaacacagcagcactatcaacttgttgtaggaaagtatct 486 |||| |||||||||||||||||| || ||||||||||||||||| ||||| ||||| ||| Sbjct: 2024 aaccgtgtgcttgcattatggaataccgcagcactatcaacttgctgtagaaaagtctct 1965 Query: 487 gctgacttcttatcggttgtgataatacaatctgtgtgtgcacttccataacgatttata 546 |||| ||| ||| || |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1964 gctgcctttccatcagtagtgataatgcaatctgtgtgtgcacttccatagcgatttata 1905 Query: 547 tggtcaattgctgactgtatatcatcaacaaattcgagcgtgcatgccattgagctatac 606 ||||||||||||||||| | |||||||||||||||||| ||||||||||||||| ||||| Sbjct: 1904 tggtcaattgctgactgcacatcatcaacaaattcgagggtgcatgccattgagttatac 1845 Query: 607 tcatgaagaaatgaatc 623 |||||| |||||||||| Sbjct: 1844 tcatgatgaaatgaatc 1828
>gb|AY105865.1| Zea mays PCO085448 mRNA sequence Length = 1685 Score = 359 bits (181), Expect = 7e-96 Identities = 333/381 (87%), Gaps = 2/381 (0%) Strand = Plus / Minus Query: 241 cctcattgcaaaggaagatccttgtgggtgtacacaactcccttgtctccgttcactact 300 |||||||||||||||||||||||||||||||| || ||||||||||| || ||||| ||| Sbjct: 1356 cctcattgcaaaggaagatccttgtgggtgtaaaccactcccttgtcaccattcaccact 1297 Query: 301 tgtccactccctcgtagaatgcaccgagtggttagaagaccgtcgacaccaacaggtcca 360 |||||||| || || | |||||| ||||| |||||||| || || || ||||||||||| Sbjct: 1296 tgtccactaccgcgcaaaatgcagcgagtagttagaagtccatcaactccaacaggtccg 1237 Query: 361 cgggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccgaagcgagtccca 420 ||||||||||||||| |||| |||||||||||||| |||||||| || || || |||||| Sbjct: 1236 cgggcatgtatgcgctctgtacttatgccaacctcagcacctagcccaaaacgcgtccca 1177 Query: 421 tcacagaaccttgtgcttgcattatggaacacagcagcactatcaacttgttgtaggaaa 480 ||||| |||||||||||||||||||| |||||||| |||||||||||||| || || || Sbjct: 1176 tcacaaaaccttgtgcttgcattatgaaacacagcggcactatcaacttgctgcagaaag 1117 Query: 481 gtatctgctg-acttcttatcggttgtgataatacaatctgtgtgtgcacttccataacg 539 | ||||| | ||||| |||| |||||||| || || ||||||||||||||||||||||| Sbjct: 1116 gcctctgcagcacttc-tatcagttgtgatgatgcagtctgtgtgtgcacttccataacg 1058 Query: 540 atttatatggtcaattgctgactgtatatcatcaacaaattcgagcgtgcatgccattga 599 |||||| || || || |||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 1057 atttatgtgatcgatagctgactgcacatcatcaacaaattcgactgtgcatgccattga 998 Query: 600 gctatactcatgaagaaatga 620 ||||||||||||| ||||||| Sbjct: 997 gctatactcatgacgaaatga 977
>gb|AF022914.1|AF022914 Triticum aestivum pyrroline-5-carboxylate synthetase mRNA, partial cds Length = 452 Score = 283 bits (143), Expect = 3e-73 Identities = 170/179 (94%) Strand = Plus / Minus Query: 445 tggaacacagcagcactatcaacttgttgtaggaaagtatctgctgacttcttatcggtt 504 ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||| Sbjct: 428 tggaacacagcagcactgtcaacttgttgtagaaaagtatccgctgacttcttatcagtt 369 Query: 505 gtgataatacaatctgtgtgtgcacttccataacgatttatatggtcaattgctgactgt 564 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 368 gtgataatacaatctgtgtgtgcacttccataacgatttatatggtcaatcgctgactgc 309 Query: 565 atatcatcaacaaattcgagcgtgcatgccattgagctatactcatgaagaaatgaatc 623 | |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 308 acatcatcaacaaattcgagggtgcatgccattgagctatactcatgatgaaatgaatc 250
>dbj|AK102633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099M14, full insert sequence Length = 2767 Score = 216 bits (109), Expect = 7e-53 Identities = 313/381 (82%) Strand = Plus / Minus Query: 241 cctcattgcaaaggaagatccttgtgggtgtacacaactcccttgtctccgttcactact 300 |||||||||||||||||| ||| ||||||||||| || ||||||| || ||||| ||| Sbjct: 2271 cctcattgcaaaggaagactcttatgggtgtacacgacatccttgtcaccattcaccact 2212 Query: 301 tgtccactccctcgtagaatgcaccgagtggttagaagaccgtcgacaccaacaggtcca 360 || |||| |||||| | || || || || |||| ||||| || ||||| || |||||| Sbjct: 2211 tgcccacgccctcgcaagatccatcgtgtagttaagagaccttcaacacccactggtcca 2152 Query: 361 cgggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccgaagcgagtccca 420 |||||||| || ||||||||||||||||||||||| ||||| | || || |||| |||| Sbjct: 2151 cgggcatggatacgccctgtgcttatgccaacctcagcacccaatccaaaacgagcccca 2092 Query: 421 tcacagaaccttgtgcttgcattatggaacacagcagcactatcaacttgttgtaggaaa 480 ||| |||| || || ||||||||||| || |||||||||||||||||| |||| ||| Sbjct: 2091 tcagagaatctcgtacttgcattatgaaatacagcagcactatcaactctgcgtagaaaa 2032 Query: 481 gtatctgctgacttcttatcggttgtgataatacaatctgtgtgtgcacttccataacga 540 || |||||| ||| | ||| || |||| ||||||||||| || ||||||||||||||| Sbjct: 2031 gtctctgctaccttatcatctgtagtgacgatacaatctgtatgagcacttccataacga 1972 Query: 541 tttatatggtcaattgctgactgtatatcatcaacaaattcgagcgtgcatgccattgag 600 | ||||||||||||||||| || | |||||||||||| || | ||||| ||||| || Sbjct: 1971 tgaatatggtcaattgctgattgaacatcatcaacaaactcaacagtgcaggccatagaa 1912 Query: 601 ctatactcatgaagaaatgaa 621 |||||||||||| |||||||| Sbjct: 1911 ctatactcatgatgaaatgaa 1891
>gb|AY574031.1| Oryza sativa (japonica cultivar-group) delta-1-pyrroline-5-carboxylate synthetase (P5CS) mRNA, complete cds Length = 2151 Score = 212 bits (107), Expect = 1e-51 Identities = 311/379 (82%) Strand = Plus / Minus Query: 243 tcattgcaaaggaagatccttgtgggtgtacacaactcccttgtctccgttcactacttg 302 |||||||||||||||| ||| ||||||||||| || ||||||| || ||||| ||||| Sbjct: 2151 tcattgcaaaggaagactcttatgggtgtacacgacatccttgtcaccattcaccacttg 2092 Query: 303 tccactccctcgtagaatgcaccgagtggttagaagaccgtcgacaccaacaggtccacg 362 |||| |||||| | || || || || |||| ||||| || ||||| || |||||||| Sbjct: 2091 cccacgccctcgcaagatccatcgtgtagttaagagaccttcaacacccactggtccacg 2032 Query: 363 ggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccgaagcgagtcccatc 422 |||||| || ||||||||||||||||||||||| ||||| | || || |||| |||||| Sbjct: 2031 ggcatggatacgccctgtgcttatgccaacctcagcacccaatccaaaacgagccccatc 1972 Query: 423 acagaaccttgtgcttgcattatggaacacagcagcactatcaacttgttgtaggaaagt 482 | |||| || || ||||||||||| || |||||||||||||||||| |||| ||||| Sbjct: 1971 agagaatctcgtacttgcattatgaaatacagcagcactatcaactctgcgtagaaaagt 1912 Query: 483 atctgctgacttcttatcggttgtgataatacaatctgtgtgtgcacttccataacgatt 542 |||||| ||| | ||| || |||| ||||||||||| || |||||||||||||||| Sbjct: 1911 ctctgctaccttatcatctgtagtgacgatacaatctgtatgagcacttccataacgatg 1852 Query: 543 tatatggtcaattgctgactgtatatcatcaacaaattcgagcgtgcatgccattgagct 602 ||||||||||||||||| || | |||||||||||| || | ||||| ||||| || || Sbjct: 1851 aatatggtcaattgctgattgaacatcatcaacaaactcaacagtgcaggccatagaact 1792 Query: 603 atactcatgaagaaatgaa 621 |||||||||| |||||||| Sbjct: 1791 atactcatgatgaaatgaa 1773
>dbj|D49714.1| Oryza sativa mRNA for deltal-pyrroline-5-carboxylate synthetase, complete cds Length = 2549 Score = 208 bits (105), Expect = 2e-50 Identities = 312/381 (81%) Strand = Plus / Minus Query: 241 cctcattgcaaaggaagatccttgtgggtgtacacaactcccttgtctccgttcactact 300 |||||||||||||||||| ||| ||||||||||| || ||||||| || ||||| ||| Sbjct: 2251 cctcattgcaaaggaagactcttatgggtgtacacgacatccttgtcaccattcaccact 2192 Query: 301 tgtccactccctcgtagaatgcaccgagtggttagaagaccgtcgacaccaacaggtcca 360 || |||| ||||| | || || || || |||| ||||| || ||||| || |||||| Sbjct: 2191 tgcccacgtcctcgcaagatccatcgtgtagttaagagaccttcaacacccactggtcca 2132 Query: 361 cgggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccgaagcgagtccca 420 |||||||| || ||||||||||||||||||||||| ||||| | || || |||| |||| Sbjct: 2131 cgggcatggatacgccctgtgcttatgccaacctcagcacccaatccaaaacgagcccca 2072 Query: 421 tcacagaaccttgtgcttgcattatggaacacagcagcactatcaacttgttgtaggaaa 480 ||| |||| || || ||||||||||| || |||||||||||||||||| |||| ||| Sbjct: 2071 tcagagaatctcgtacttgcattatgaaatacagcagcactatcaactctgcgtagaaaa 2012 Query: 481 gtatctgctgacttcttatcggttgtgataatacaatctgtgtgtgcacttccataacga 540 || |||||| ||| | ||| || |||| ||||||||||| || ||||||||||||||| Sbjct: 2011 gtctctgctaccttatcatctgtagtgacgatacaatctgtatgagcacttccataacga 1952 Query: 541 tttatatggtcaattgctgactgtatatcatcaacaaattcgagcgtgcatgccattgag 600 | ||||||||||||||||| || | |||||||||||| || | ||||| ||||| || Sbjct: 1951 tgaatatggtcaattgctgattgaacatcatcaacaaactcaacagtgcaggccatagaa 1892 Query: 601 ctatactcatgaagaaatgaa 621 |||||||||||| |||||||| Sbjct: 1891 ctatactcatgatgaaatgaa 1871
>gb|AY109740.1| Zea mays CL2942_1 mRNA sequence Length = 1961 Score = 188 bits (95), Expect = 1e-44 Identities = 239/287 (83%) Strand = Plus / Minus Query: 337 agaccgtcgacaccaacaggtccacgggcatgtatgcgccctgtgcttatgccaacctct 396 ||||| || ||||| ||||| || || |||||||| ||||||||||||||||||||||| Sbjct: 1510 agaccttcaacacccacaggcccgcgagcatgtatacgccctgtgcttatgccaacctcg 1451 Query: 397 gcacctagaccgaagcgagtcccatcacagaaccttgtgcttgcattatggaacacagca 456 ||||| | || || |||| ||||||| |||| | ||| || |||||||| || |||||| Sbjct: 1450 gcacccaatccaaaacgagccccatcagagaatcgtgtactcgcattatgaaatacagca 1391 Query: 457 gcactatcaacttgttgtaggaaagtatctgctgacttcttatcggttgtgataatacaa 516 |||||||||||||| | || ||||| |||||| || | ||| || |||||||| ||| Sbjct: 1390 gcactatcaacttgccgcagaaaagtttctgctactttatcatctgtggtgataatgcaa 1331 Query: 517 tctgtgtgtgcacttccataacgatttatatggtcaattgctgactgtatatcatcaaca 576 ||||| ||||||||||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct: 1330 tctgtatgtgcacttccataacgatgtatatggttaattgctgactgtacatcatcaacg 1271 Query: 577 aattcgagcgtgcatgccattgagctatactcatgaagaaatgaatc 623 || || | ||||| ||||| |||||||| |||||| | |||||||| Sbjct: 1270 aactcaattgtgcaggccatagagctatattcatgatggaatgaatc 1224
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 141 bits (71), Expect = 3e-30 Identities = 89/95 (93%) Strand = Plus / Minus Query: 529 cttccataacgatttatatggtcaattgctgactgtatatcatcaacaaattcgagcgtg 588 |||||||| |||||||||||||||||||||||||| | |||||||||||||||||| ||| Sbjct: 36432104 cttccatagcgatttatatggtcaattgctgactgcacatcatcaacaaattcgagggtg 36432045 Query: 589 catgccattgagctatactcatgaagaaatgaatc 623 |||||||||||| ||||||||||| |||||||||| Sbjct: 36432044 catgccattgagttatactcatgatgaaatgaatc 36432010 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 241 cctcattgcaaaggaagatccttgtgggtgtacacaactcccttgtctccgttcactact 300 ||||| |||||||| || ||| |||||||||| |||||||||||||| |||||||||||| Sbjct: 36432989 cctcactgcaaagggagctccctgtgggtgtaaacaactcccttgtcgccgttcactact 36432930 Query: 301 tgtccactccctcgtagaatgc 322 |||||||| ||||||| ||||| Sbjct: 36432929 tgtccacttcctcgtaaaatgc 36432908 Score = 93.7 bits (47), Expect = 7e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 391 acctctgcacctagaccgaagcgagtcccatcacagaaccttgtgcttgcattatggaac 450 ||||| ||||||||||| ||||||| |||||||||||||| |||||||||||||||||| Sbjct: 36432476 acctcagcacctagaccaaagcgagccccatcacagaaccgtgtgcttgcattatggaat 36432417 Query: 451 acagcagcact 461 || |||||||| Sbjct: 36432416 accgcagcact 36432406 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 349 ccaacaggtccacgggcatgtatgcgccctgtgcttatgccaacct 394 |||||||| || || ||||||||||||||||||||||||||||||| Sbjct: 36432668 ccaacaggcccccgagcatgtatgcgccctgtgcttatgccaacct 36432623 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 460 ctatcaacttgttgtaggaaagtatctgctgacttcttatcggttgtgataatacaatct 519 ||||||||||| ||||| ||||| ||||||| ||| ||| || |||||||| |||||| Sbjct: 36432314 ctatcaacttgctgtagaaaagtctctgctgcctttccatcagtagtgataatgcaatct 36432255 Query: 520 gtgtgtgcact 530 ||||||||||| Sbjct: 36432254 gtgtgtgcact 36432244
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 141 bits (71), Expect = 3e-30 Identities = 89/95 (93%) Strand = Plus / Minus Query: 529 cttccataacgatttatatggtcaattgctgactgtatatcatcaacaaattcgagcgtg 588 |||||||| |||||||||||||||||||||||||| | |||||||||||||||||| ||| Sbjct: 83943 cttccatagcgatttatatggtcaattgctgactgcacatcatcaacaaattcgagggtg 83884 Query: 589 catgccattgagctatactcatgaagaaatgaatc 623 |||||||||||| ||||||||||| |||||||||| Sbjct: 83883 catgccattgagttatactcatgatgaaatgaatc 83849 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 241 cctcattgcaaaggaagatccttgtgggtgtacacaactcccttgtctccgttcactact 300 ||||| |||||||| || ||| |||||||||| |||||||||||||| |||||||||||| Sbjct: 84828 cctcactgcaaagggagctccctgtgggtgtaaacaactcccttgtcgccgttcactact 84769 Query: 301 tgtccactccctcgtagaatgc 322 |||||||| ||||||| ||||| Sbjct: 84768 tgtccacttcctcgtaaaatgc 84747 Score = 93.7 bits (47), Expect = 7e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 391 acctctgcacctagaccgaagcgagtcccatcacagaaccttgtgcttgcattatggaac 450 ||||| ||||||||||| ||||||| |||||||||||||| |||||||||||||||||| Sbjct: 84315 acctcagcacctagaccaaagcgagccccatcacagaaccgtgtgcttgcattatggaat 84256 Query: 451 acagcagcact 461 || |||||||| Sbjct: 84255 accgcagcact 84245 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 349 ccaacaggtccacgggcatgtatgcgccctgtgcttatgccaacct 394 |||||||| || || ||||||||||||||||||||||||||||||| Sbjct: 84507 ccaacaggcccccgagcatgtatgcgccctgtgcttatgccaacct 84462 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 460 ctatcaacttgttgtaggaaagtatctgctgacttcttatcggttgtgataatacaatct 519 ||||||||||| ||||| ||||| ||||||| ||| ||| || |||||||| |||||| Sbjct: 84153 ctatcaacttgctgtagaaaagtctctgctgcctttccatcagtagtgataatgcaatct 84094 Query: 520 gtgtgtgcact 530 ||||||||||| Sbjct: 84093 gtgtgtgcact 84083
>dbj|AB193551.1| Triticum aestivum WP5CS mRNA for delta1-pyrroline-5-carboxylate synthetase, complete cds Length = 2405 Score = 139 bits (70), Expect = 1e-29 Identities = 268/334 (80%) Strand = Plus / Minus Query: 242 ctcattgcaaaggaagatccttgtgggtgtacacaactcccttgtctccgttcactactt 301 ||||||||||||||||| ||| ||||||||| |||| ||||||| || ||||| |||| Sbjct: 2234 ctcattgcaaaggaagactcttatgggtgtactcaacatccttgtcaccattcaccactt 2175 Query: 302 gtccactccctcgtagaatgcaccgagtggttagaagaccgtcgacaccaacaggtccac 361 | || ||||||||| | || || || |||| |||||| || ||||| |||||||||| Sbjct: 2174 gccctttccctcgtaagagccatcgtgtagttaaaagaccttcaacacccacaggtccac 2115 Query: 362 gggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccgaagcgagtcccat 421 | |||||||| || ||||| |||||||||||||| ||||| || || || |||| |||| Sbjct: 2114 gtgcatgtatacggcctgtacttatgccaacctcagcaccgagcccaaaacgagcaccat 2055 Query: 422 cacagaaccttgtgcttgcattatggaacacagcagcactatcaacttgttgtaggaaag 481 | |||| ||||| || || || | || || ||||||||||||||||| |||| || | Sbjct: 2054 cggagaatcttgtactcgcgttgtataatacggcagcactatcaacttgacgtagaaagg 1995 Query: 482 tatctgctgacttcttatcggttgtgataatacaatctgtgtgtgcacttccataacgat 541 | |||||| || | ||| || |||| | ||| ||||| |||||||||||||| |||| Sbjct: 1994 tctctgctactttatcatctgtagtgaccacacagtctgtatgtgcacttccatagcgat 1935 Query: 542 ttatatggtcaattgctgactgtatatcatcaac 575 |||||||||||||||||| |||| ||||||||| Sbjct: 1934 gtatatggtcaattgctgattgtacatcatcaac 1901
>gb|AY888045.1| Triticum aestivum delta 1-pyrroline-5-carboxylate synthetase mRNA, complete cds Length = 2260 Score = 131 bits (66), Expect = 3e-27 Identities = 267/334 (79%) Strand = Plus / Minus Query: 242 ctcattgcaaaggaagatccttgtgggtgtacacaactcccttgtctccgttcactactt 301 |||||||||||||||| ||| ||||||||| |||| ||||||| || ||||| |||| Sbjct: 2260 ctcattgcaaaggaaggctcttatgggtgtactcaacatccttgtcaccattcaccactt 2201 Query: 302 gtccactccctcgtagaatgcaccgagtggttagaagaccgtcgacaccaacaggtccac 361 | || ||||||||| | || || || |||| |||||| || ||||| |||||||||| Sbjct: 2200 gccctttccctcgtaagagccatcgtgtagttaaaagaccttcaacacccacaggtccac 2141 Query: 362 gggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccgaagcgagtcccat 421 | |||||||| || ||||| |||||||||||||| ||||| || || || |||| |||| Sbjct: 2140 gtgcatgtatacggcctgtacttatgccaacctcagcaccgagtccaaaacgagcaccat 2081 Query: 422 cacagaaccttgtgcttgcattatggaacacagcagcactatcaacttgttgtaggaaag 481 | |||| ||||| || || || | || || ||||||||||||||||| |||| || | Sbjct: 2080 cggagaatcttgtactcgcgttgtataatacggcagcactatcaacttgacgtagaaagg 2021 Query: 482 tatctgctgacttcttatcggttgtgataatacaatctgtgtgtgcacttccataacgat 541 | |||||| || | ||| || |||| | ||| ||||| |||||||||||||| |||| Sbjct: 2020 tctctgctactttatcatctgtagtgaccacacagtctgtatgtgcacttccatagcgat 1961 Query: 542 ttatatggtcaattgctgactgtatatcatcaac 575 |||||||||||||||||| |||| ||||||||| Sbjct: 1960 gtatatggtcaattgctgattgtacatcatcaac 1927
>dbj|AK120668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160C21, full insert sequence Length = 3713 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 241 cctcattgcaaaggaagatccttgtgggtgtacacaactcccttgtctccgttcactact 300 ||||| |||||||| || ||| |||||||||| |||||||||||||| |||||||||||| Sbjct: 2931 cctcactgcaaagggagctccctgtgggtgtaaacaactcccttgtcgccgttcactact 2990 Query: 301 tgtccactccctcgtagaatgc 322 |||||||| ||||||| ||||| Sbjct: 2991 tgtccacttcctcgtaaaatgc 3012 Score = 93.7 bits (47), Expect = 7e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 391 acctctgcacctagaccgaagcgagtcccatcacagaaccttgtgcttgcattatggaac 450 ||||| ||||||||||| ||||||| |||||||||||||| |||||||||||||||||| Sbjct: 3444 acctcagcacctagaccaaagcgagccccatcacagaaccgtgtgcttgcattatggaat 3503 Query: 451 acagcagcact 461 || |||||||| Sbjct: 3504 accgcagcact 3514 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 349 ccaacaggtccacgggcatgtatgcgccctgtgcttatgccaacct 394 |||||||| || || ||||||||||||||||||||||||||||||| Sbjct: 3252 ccaacaggcccccgagcatgtatgcgccctgtgcttatgccaacct 3297 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 460 ctatcaacttgttgtaggaaagtatctgctgacttcttatcggttgtgataatacaatct 519 ||||||||||| ||||| ||||| ||||||| ||| ||| || |||||||| |||||| Sbjct: 3606 ctatcaacttgctgtagaaaagtctctgctgcctttccatcagtagtgataatgcaatct 3665 Query: 520 gtgtgtgcact 530 ||||||||||| Sbjct: 3666 gtgtgtgcact 3676
>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06, complete sequence Length = 145323 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 529 cttccataacgatttatatggtcaattgctgactgtatatcatcaacaaattcgagcgtg 588 ||||||||||||| ||||||||||||||||| || | |||||||||||| || | ||| Sbjct: 73641 cttccataacgatgaatatggtcaattgctgattgaacatcatcaacaaactcaacagtg 73700 Query: 589 catgccattgagctatactcatgaagaaatgaa 621 || ||||| || |||||||||||| |||||||| Sbjct: 73701 caggccatagaactatactcatgatgaaatgaa 73733 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 337 agaccgtcgacaccaacaggtccacgggcatgtatgcgccctgtgcttatgccaacct 394 ||||| || ||||| || |||||||||||||| || |||||||||||||||||||||| Sbjct: 73131 agaccttcaacacccactggtccacgggcatggatacgccctgtgcttatgccaacct 73188 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 241 cctcattgcaaaggaagatccttgtgggtgtacacaactcccttgtctccgttcactact 300 |||||||||||||||||| ||| ||||||||||| || ||||||| || ||||| ||| Sbjct: 72870 cctcattgcaaaggaagactcttatgggtgtacacgacatccttgtcaccattcaccact 72929 Query: 301 tgtccactccctcg 314 || |||| |||||| Sbjct: 72930 tgcccacgccctcg 72943 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 412 cgagtcccatcacagaaccttgtgcttgcattatggaacacagcagcact 461 |||| ||||||| |||| || || ||||||||||| || ||||||||||| Sbjct: 73276 cgagccccatcagagaatctcgtacttgcattatgaaatacagcagcact 73325
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 529 cttccataacgatttatatggtcaattgctgactgtatatcatcaacaaattcgagcgtg 588 ||||||||||||| ||||||||||||||||| || | |||||||||||| || | ||| Sbjct: 22230376 cttccataacgatgaatatggtcaattgctgattgaacatcatcaacaaactcaacagtg 22230435 Query: 589 catgccattgagctatactcatgaagaaatgaa 621 || ||||| || |||||||||||| |||||||| Sbjct: 22230436 caggccatagaactatactcatgatgaaatgaa 22230468 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 337 agaccgtcgacaccaacaggtccacgggcatgtatgcgccctgtgcttatgccaacct 394 ||||| || ||||| || |||||||||||||| || |||||||||||||||||||||| Sbjct: 22229866 agaccttcaacacccactggtccacgggcatggatacgccctgtgcttatgccaacct 22229923 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 241 cctcattgcaaaggaagatccttgtgggtgtacacaactcccttgtctccgttcactact 300 |||||||||||||||||| ||| ||||||||||| || ||||||| || ||||| ||| Sbjct: 22229605 cctcattgcaaaggaagactcttatgggtgtacacgacatccttgtcaccattcaccact 22229664 Query: 301 tgtccactccctcg 314 || |||| |||||| Sbjct: 22229665 tgcccacgccctcg 22229678 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 412 cgagtcccatcacagaaccttgtgcttgcattatggaacacagcagcact 461 |||| ||||||| |||| || || ||||||||||| || ||||||||||| Sbjct: 22230011 cgagccccatcagagaatctcgtacttgcattatgaaatacagcagcact 22230060
>gb|U92286.1|ADU92286 Actinidia deliciosa pyrroline-5-carboxylate synthetase mRNA, complete cds Length = 2378 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 346 acaccaacaggtccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctaga 405 ||||| ||||||||||| |||||||| | | ||| ||||| ||||||||||||||||| Sbjct: 2056 acaccgacaggtccacgtgcatgtatcctacttgtacttatcccaacctctgcacctagc 1997 Query: 406 ccgaagcgagtcccatcacagaaccttgtgcttgcatt 443 ||||| |||| ||| |||| || |||||||||||||| Sbjct: 1996 ccgaaacgagccccgtcactaaatcttgtgcttgcatt 1959
>dbj|AB097403.1| Raphanus sativus P5CS mRNA for delta1-pyrroline-5-carboxylate synthetase, partial cds Length = 712 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 358 ccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccgaagcgagtc 417 ||||||||||| || | ||||||||||| |||||||| ||||| || || || ||| Sbjct: 666 ccacgggcatggatcctgcctgtgcttatcccaacctcagcaccaagtccaaatcgaaaa 607 Query: 418 ccatcacagaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 |||||| |||| ||||||||||| || ||||||||||||||||| || ||||| Sbjct: 606 ccatcagagaatcttgtgcttgcgttgtggaacacagcagcactgtctacttg 554
>gb|AY108698.1| Zea mays PCO099071 mRNA sequence Length = 599 Score = 69.9 bits (35), Expect = 9e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 283 ttgtctccgttcactacttgtccactccctcgtagaatgcaccgagtggttagaagaccg 342 ||||| |||||||| ||||| || |||||||| | || || || || |||| ||||| Sbjct: 437 ttgtcaccgttcaccacttgcccgctccctcgcatgatccagcgcgttgttaagagacct 496 Query: 343 tcgacaccaacaggtccacgggcatgtatgcgccctgtgcttatgccaacctctgcacc 401 || ||||| || || ||||| |||||||| ||||||||||||||||||||||| ||||| Sbjct: 497 tcaacacccacgggcccacgagcatgtatacgccctgtgcttatgccaacctcagcacc 555
>emb|X98422.1|MSP5CS2 M.sativa mRNA for delta-1-pyrroline-5-carboxylate synthase, P5CS-2 Length = 1250 Score = 67.9 bits (34), Expect = 4e-08 Identities = 78/93 (83%) Strand = Plus / Minus Query: 378 tgtgcttatgccaacctctgcacctagaccgaagcgagtcccatcacagaaccttgtgct 437 ||||||||| || ||||||||||| || || || || | |||||| || || ||||| || Sbjct: 708 tgtgcttattccnacctctgcaccaagcccaaatcgtgccccatcgcaaaatcttgtact 649 Query: 438 tgcattatggaacacagcagcactatcaacttg 470 |||||| ||||| ||||||||||| |||||||| Sbjct: 648 tgcattgtggaatacagcagcactgtcaacttg 616
>gb|AY492005.1| Glycine max delta-pyrroline-5-carboxylate synthetase (P5CS) mRNA, complete cds Length = 2148 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 382 cttatgccaacctctgcacctagaccgaagcgagtcccatcacagaaccttgtgcttgca 441 ||||| ||||||||||||||||| || || || | |||||||| ||| ||||| || ||| Sbjct: 2012 cttattccaacctctgcacctagtccaaatcgtgccccatcactgaatcttgtactagca 1953 Query: 442 ttatggaacacagcagcactatcaacttg 470 || ||||| ||||||||||| || ||||| Sbjct: 1952 ttgtggaaaacagcagcactgtctacttg 1924 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 523 tgtgcacttccataacgatttatatggtcaattgctg 559 ||||||||||||||| |||||||||| ||||| |||| Sbjct: 1871 tgtgcacttccataaagatttatatgatcaatagctg 1835
>gb|AF314811.1|AF314811 Brassica napus delta 1-pyrroline-5-carboxylate synthetase A mRNA, complete cds Length = 2551 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 358 ccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccgaagcgagtc 417 ||||||||||| || | |||||||||||| || ||||| ||||| || || || ||| Sbjct: 2129 ccacgggcatggatcctccctgtgcttatccccacctcagcaccaagtccaaatcgaaaa 2070 Query: 418 ccatcacagaaccttgtgcttgcattatggaacacagcagc 458 |||||| |||| ||||||||||| || |||||||||||||| Sbjct: 2069 ccatcagagaatcttgtgcttgcgttgtggaacacagcagc 2029 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 510 aatacaatctgtgtgtgcacttccat 535 |||||| ||||||||||||||||||| Sbjct: 1977 aatacagtctgtgtgtgcacttccat 1952
>dbj|AP006103.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT11J24, TM0185, complete sequence Length = 121047 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 391 acctctgcacctagaccgaagcgagtcccatcacagaaccttgtgcttgcattatggaac 450 ||||||||||| || || ||||| | |||||||| |||||||| |||||||| ||||| Sbjct: 63792 acctctgcaccaagcccaaagcgtgctccatcacaaaaccttgtacttgcattgtggaat 63733 Query: 451 acagcagcactat 463 ||||||||||||| Sbjct: 63732 acagcagcactat 63720
>emb|AJ715851.1| Glycine max partial p5cs gene for delta 1-pyrroline-5-carboxylate synthetase, cultivar Williams Length = 831 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 388 ccaacctctgcacctagaccgaagcgagtcccatcacagaaccttgtgcttgcattatgg 447 |||||||||||||| || || ||||| | |||||||| |||| || |||||||| ||| Sbjct: 787 ccaacctctgcaccaagcccaaagcgtgctccatcacaaaaccgcgtacttgcattgtgg 728 Query: 448 aacacagcagcactatcaacttg 470 || ||||||||||| |||||||| Sbjct: 727 aatacagcagcactgtcaacttg 705
>emb|AJ005686.1|VVI5686 Vitis vinifera mRNA for pyrroline-5-carboxylate synthetase (delta 1 type) Length = 2374 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 412 cgagtcccatcacagaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 |||| ||||||||| || |||||||| ||||| || || |||||||||||||||||||| Sbjct: 2032 cgagccccatcacaaaatcttgtgctagcattgtgaaagacagcagcactatcaacttg 1974 Score = 40.1 bits (20), Expect = 8.5 Identities = 77/96 (80%) Strand = Plus / Minus Query: 522 gtgtgcacttccataacgatttatatggtcaattgctgactgtatatcatcaacaaattc 581 |||||||||||||| || | ||||| ||||| || || |||| ||||||||||| || Sbjct: 1925 gtgtgcacttccatgtcggtgaatatgatcaatggcagaatgtacatcatcaacaatctc 1866 Query: 582 gagcgtgcatgccattgagctatactcatgaagaaa 617 | ||||| |||||||| ||||||||||| |||| Sbjct: 1865 aacagtgcaagccattgaattatactcatgatgaaa 1830
>ref|NM_115419.3| Arabidopsis thaliana catalytic/ glutamate 5-kinase/ glutamate-5-semialdehyde dehydrogenase AT3G55610 mRNA, complete cds Length = 2541 Score = 60.0 bits (30), Expect = 9e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 349 ccaacaggtccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccg 408 ||||| || ||||||||||| || | | ||||||||| || ||||| ||||| || ||| Sbjct: 2149 ccaactggaccacgggcatgaatcctgcttgtgcttattcccacctcagcaccaagtccg 2090 Query: 409 aagcgagtcccatcacagaaccttgtgcttgcattatggaacacagcagcactatcaact 468 || | | |||||| |||| |||||||||||||| ||||| ||||||||||| || ||| Sbjct: 2089 aacctaaaaccatcagagaatcttgtgcttgcattgtggaaaacagcagcactgtccact 2030 Query: 469 tg 470 || Sbjct: 2029 tg 2028 Score = 44.1 bits (22), Expect = 0.54 Identities = 46/54 (85%) Strand = Plus / Minus Query: 252 aggaagatccttgtgggtgtacacaactcccttgtctccgttcactacttgtcc 305 |||||||||||| |||||||| || | ||| |||||||| | ||| |||||||| Sbjct: 2246 aggaagatccttatgggtgtaaacgattccattgtctccatccacaacttgtcc 2193
>emb|Y09355.1|ATP5CS2 A.thaliana mRNA for pyrroline-5-carboxlyate synthetase Length = 2440 Score = 60.0 bits (30), Expect = 9e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 349 ccaacaggtccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccg 408 ||||| || ||||||||||| || | | ||||||||| || ||||| ||||| || ||| Sbjct: 2119 ccaactggaccacgggcatgaatcctgcttgtgcttattcccacctcagcaccaagtccg 2060 Query: 409 aagcgagtcccatcacagaaccttgtgcttgcattatggaacacagcagcactatcaact 468 || | | |||||| |||| |||||||||||||| ||||| ||||||||||| || ||| Sbjct: 2059 aacctaaaaccatcagagaatcttgtgcttgcattgtggaaaacagcagcactgtccact 2000 Query: 469 tg 470 || Sbjct: 1999 tg 1998 Score = 44.1 bits (22), Expect = 0.54 Identities = 46/54 (85%) Strand = Plus / Minus Query: 252 aggaagatccttgtgggtgtacacaactcccttgtctccgttcactacttgtcc 305 |||||||||||| |||||||| || | ||| |||||||| | ||| |||||||| Sbjct: 2216 aggaagatccttatgggtgtaaacgattccattgtctccatccacaacttgtcc 2163
>gb|AY091766.1| Arabidopsis thaliana AT3g55610/F1I16_20 mRNA, complete cds Length = 2517 Score = 60.0 bits (30), Expect = 9e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 349 ccaacaggtccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccg 408 ||||| || ||||||||||| || | | ||||||||| || ||||| ||||| || ||| Sbjct: 2149 ccaactggaccacgggcatgaatcctgcttgtgcttattcccacctcagcaccaagtccg 2090 Query: 409 aagcgagtcccatcacagaaccttgtgcttgcattatggaacacagcagcactatcaact 468 || | | |||||| |||| |||||||||||||| ||||| ||||||||||| || ||| Sbjct: 2089 aacctaaaaccatcagagaatcttgtgcttgcattgtggaaaacagcagcactgtccact 2030 Query: 469 tg 470 || Sbjct: 2029 tg 2028 Score = 44.1 bits (22), Expect = 0.54 Identities = 46/54 (85%) Strand = Plus / Minus Query: 252 aggaagatccttgtgggtgtacacaactcccttgtctccgttcactacttgtcc 305 |||||||||||| |||||||| || | ||| |||||||| | ||| |||||||| Sbjct: 2246 aggaagatccttatgggtgtaaacgattccattgtctccatccacaacttgtcc 2193
>dbj|AK220885.1| Arabidopsis thaliana mRNA for delta-1-pyrroline-5-carboxylate synthetase, partial cds, clone: RAFL22-44-G03 Length = 567 Score = 60.0 bits (30), Expect = 9e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 349 ccaacaggtccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccg 408 ||||| || ||||||||||| || | | ||||||||| || ||||| ||||| || ||| Sbjct: 165 ccaactggaccacgggcatgaatcctgcttgtgcttattcccacctcagcaccaagtccg 106 Query: 409 aagcgagtcccatcacagaaccttgtgcttgcattatggaacacagcagcactatcaact 468 || | | |||||| |||| |||||||||||||| ||||| ||||||||||| || ||| Sbjct: 105 aacctaaaaccatcagagaatcttgtgcttgcattgtggaaaacagcagcactgtccact 46 Query: 469 tg 470 || Sbjct: 45 tg 44 Score = 44.1 bits (22), Expect = 0.54 Identities = 46/54 (85%) Strand = Plus / Minus Query: 252 aggaagatccttgtgggtgtacacaactcccttgtctccgttcactacttgtcc 305 |||||||||||| |||||||| || | ||| |||||||| | ||| |||||||| Sbjct: 262 aggaagatccttatgggtgtaaacgattccattgtctccatccacaacttgtcc 209
>gb|AF314812.1|AF314812 Brassica napus delta 1-pyrroline-5-carboxylate synthetase B mRNA, complete cds Length = 2529 Score = 60.0 bits (30), Expect = 9e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 349 ccaacaggtccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccg 408 ||||| || ||||||||||| || | | ||||||||| || ||||| ||||| || || Sbjct: 2167 ccaactggaccacgggcatggatcctgcttgtgcttattcccacctcagcaccaagtcca 2108 Query: 409 aagcgagtcccatcacagaaccttgtgcttgcattatggaacacagcagcactatcaact 468 || ||| ||||||||||| |||||||||||||| |||| ||||||||||| || ||| Sbjct: 2107 aatcgaaaaccatcacagaatcttgtgcttgcattgtggataacagcagcactgtccact 2048 Query: 469 tg 470 || Sbjct: 2047 tg 2046
>gb|DQ226732.1| Boechera divaricarpa isolate SLW-A-B08 mRNA sequence Length = 451 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 418 ccatcacagaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 |||||| |||| |||||||||||||| ||||| ||||||||||| || ||||| Sbjct: 305 ccatcagagaatcttgtgcttgcattgtggaaaacagcagcactgtccacttg 357
>emb|AJ278818.1|MTR278818 Medicago truncatula mRNA for pyrroline-5-carboxylate synthetase 1 (p5CS1 gene) Length = 2520 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 523 tgtgcacttccataacgatttatatggtcaattgctg 559 |||||||||||||||||||||||||| ||||| |||| Sbjct: 1941 tgtgcacttccataacgatttatatgatcaatagctg 1905
>dbj|AB056452.2| Vigna unguiculata VuP5CS mRNA, complete cds Length = 2791 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 378 tgtgcttatgccaacctctgcacctagaccgaagcgagtcccatcacagaaccttgtgct 437 |||||| || |||||||||||||| || || ||||| | |||||||| || | ||| || Sbjct: 2181 tgtgctaattccaacctctgcaccaaggccaaagcgtgctccatcacaaaatcgtgtact 2122 Query: 438 tgcattatggaacacagcagcactatcaacttg 470 |||||| ||||| || |||||||| |||||||| Sbjct: 2121 tgcattgtggaaaactgcagcactgtcaacttg 2089
>emb|X86778.1|ATP5CSBGN A.thaliana p5csB gene Length = 5789 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 418 ccatcacagaaccttgtgcttgcattatggaacacagcagcact 461 |||||| |||| |||||||||||||| ||||| ||||||||||| Sbjct: 4755 ccatcagagaatcttgtgcttgcattgtggaaaacagcagcact 4712 Score = 44.1 bits (22), Expect = 0.54 Identities = 46/54 (85%) Strand = Plus / Minus Query: 252 aggaagatccttgtgggtgtacacaactcccttgtctccgttcactacttgtcc 305 |||||||||||| |||||||| || | ||| |||||||| | ||| |||||||| Sbjct: 5118 aggaagatccttatgggtgtaaacgattccattgtctccatccacaacttgtcc 5065
>emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome 3, BAC clone F1I16 Length = 103785 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 418 ccatcacagaaccttgtgcttgcattatggaacacagcagcact 461 |||||| |||| |||||||||||||| ||||| ||||||||||| Sbjct: 12768 ccatcagagaatcttgtgcttgcattgtggaaaacagcagcact 12811 Score = 44.1 bits (22), Expect = 0.54 Identities = 46/54 (85%) Strand = Plus / Plus Query: 252 aggaagatccttgtgggtgtacacaactcccttgtctccgttcactacttgtcc 305 |||||||||||| |||||||| || | ||| |||||||| | ||| |||||||| Sbjct: 12405 aggaagatccttatgggtgtaaacgattccattgtctccatccacaacttgtcc 12458
>dbj|AP004477.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT12K07, TM0011b, complete sequence Length = 44662 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 391 acctctgcacctagaccgaagcgagtcccatcacagaaccttgtgcttgcattatggaac 450 |||||||||||||| ||||| | | ||||||||| || |||||||||||||| || || Sbjct: 20613 acctctgcacctagtccgaatagtgccccatcacaaaatcttgtgcttgcattgtgaaaa 20672 Query: 451 acagcagcactatcaa 466 ||||| ||| |||||| Sbjct: 20673 acagccgcattatcaa 20688
>gb|AF067967.1|AF067967 Mesembryanthemum crystallinum pyrroline-5-carboxylate synthetase (P5CS) mRNA, complete cds Length = 2992 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 418 ccatcacagaaccttgtgcttgcattatggaacacagcagcactatcaact 468 ||||||||||| ||||| ||||||||||| | ||||||||||| |||||| Sbjct: 2167 ccatcacagaatcttgtacttgcattatgaagtacagcagcactgtcaact 2117
>gb|AY804246.1| Chorispora bungeana delta-1-pyrroline 5-carboxylase synthetase mRNA, complete cds Length = 2181 Score = 50.1 bits (25), Expect = 0.009 Identities = 91/113 (80%) Strand = Plus / Minus Query: 358 ccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctagaccgaagcgagtc 417 ||||||||||| || | | ||||||||| || ||||| ||||| || ||||| ||| Sbjct: 2036 ccacgggcatggatcctgcttgtgcttattcccacctcagcaccaagtccgaatcgaaaa 1977 Query: 418 ccatcacagaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 ||||| |||| ||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 1976 ccatctgagaatcttgtgcttgcgttgtggaatacagcagcactgtctacttg 1924 Score = 44.1 bits (22), Expect = 0.54 Identities = 46/54 (85%) Strand = Plus / Minus Query: 252 aggaagatccttgtgggtgtacacaactcccttgtctccgttcactacttgtcc 305 |||||||||||| |||||||| |||| ||| |||| ||| | ||| |||||||| Sbjct: 2142 aggaagatccttatgggtgtaaacaattccattgtttccatccacaacttgtcc 2089
>gb|AF503911.1| Suaeda maritima subsp. salsa delta 1-pyrroline-5-carboxylate synthetase (P5CS) mRNA, partial cds Length = 967 Score = 50.1 bits (25), Expect = 0.009 Identities = 76/93 (81%) Strand = Plus / Minus Query: 378 tgtgcttatgccaacctctgcacctagaccgaagcgagtcccatcacagaaccttgtgct 437 |||||| || |||||||| ||||| | || || |||| ||| ||||| || || ||||| Sbjct: 544 tgtgctaatcccaacctcagcacccaacccaaaacgagccccgtcacaaaatctcgtgct 485 Query: 438 tgcattatggaacacagcagcactatcaacttg 470 |||||| || || |||||||||||||| ||||| Sbjct: 484 tgcattgtgaaatacagcagcactatctacttg 452
>ref|NM_201912.1| Arabidopsis thaliana P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1) AT2G39800 (P5CS1) transcript variant AT2G39800.2 mRNA, complete cds Length = 2519 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 425 agaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 |||| |||||||| || || |||||||||||||| ||||| ||||| Sbjct: 1985 agaatcttgtgctggcgttgtggaacacagcagcgctatccacttg 1940
>ref|NM_129539.2| Arabidopsis thaliana P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1) AT2G39800 (P5CS1) transcript variant AT2G39800.1 mRNA, complete cds Length = 2886 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 425 agaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 |||| |||||||| || || |||||||||||||| ||||| ||||| Sbjct: 2349 agaatcttgtgctggcgttgtggaacacagcagcgctatccacttg 2304
>gb|AY150430.1| Arabidopsis thaliana delta-1-pyrroline 5-carboxylase synthetase (P5C1) (At2g39800) mRNA, complete cds Length = 2185 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 425 agaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 |||| |||||||| || || |||||||||||||| ||||| ||||| Sbjct: 1969 agaatcttgtgctggcgttgtggaacacagcagcgctatccacttg 1924
>emb|X98421.1|MSP5CS1 M.sativa mRNA for delta-1-pyrroline-5-carboxylate synthase, P5CS-1 Length = 2603 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 523 tgtgcacttccataacgatttatatg 548 ||||||||||||||| |||||||||| Sbjct: 2036 tgtgcacttccataaagatttatatg 2011
>emb|X87330.1|ATP5COSMR A.thaliana mRNA for pyrroline-5-carboxylate synthetase Length = 2584 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 425 agaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 |||| |||||||| || || |||||||||||||| ||||| ||||| Sbjct: 2067 agaatcttgtgctggcgttgtggaacacagcagcgctatccacttg 2022
>emb|X86777.1|ATP5CSAGN A.thaliana mRNA for pyrroline-5-carboxylate synthetase A Length = 2552 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 425 agaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 |||| |||||||| || || |||||||||||||| ||||| ||||| Sbjct: 2041 agaatcttgtgctggcgttgtggaacacagcagcgctatccacttg 1996
>gb|AY080771.1| Arabidopsis thaliana putative delta-1-pyrroline 5-carboxylase synthetase P5C1 (At2g39800) mRNA, complete cds Length = 2600 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 425 agaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 |||| |||||||| || || |||||||||||||| ||||| ||||| Sbjct: 2088 agaatcttgtgctggcgttgtggaacacagcagcgctatccacttg 2043
>gb|AY113046.1| Arabidopsis thaliana At2g39800/T5I7.10 mRNA, complete cds Length = 2154 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 425 agaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 |||| |||||||| || || |||||||||||||| ||||| ||||| Sbjct: 1969 agaatcttgtgctggcgttgtggaacacagcagcgctatccacttg 1924
>gb|AF424633.1|AF424633 Arabidopsis thaliana At2g39800/T5I7.10 mRNA, complete cds Length = 2630 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 425 agaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 |||| |||||||| || || |||||||||||||| ||||| ||||| Sbjct: 2088 agaatcttgtgctggcgttgtggaacacagcagcgctatccacttg 2043
>emb|BX821655.1|CNS0AAA7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL61ZD08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 963 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 425 agaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 |||| |||||||| || || |||||||||||||| ||||| ||||| Sbjct: 534 agaatcttgtgctggcgttgtggaacacagcagcgctatccacttg 489
>emb|BX821384.1|CNS0AAEL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZA05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 469 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 425 agaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 |||| |||||||| || || |||||||||||||| ||||| ||||| Sbjct: 76 agaatcttgtgctggcgttgtggaacacagcagcgctatccacttg 31
>dbj|D32138.1|ATHATP5CS Arabidopsis thaliana mRNA for delta1-pyrroline-5-carboxylate synthase, complete cds Length = 2571 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 425 agaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 |||| |||||||| || || |||||||||||||| ||||| ||||| Sbjct: 2075 agaatcttgtgctggcgttgtggaacacagcagcgctatccacttg 2030
>gb|M92276.1|VIRPYRR Vigna aconitifolia pyrroline-5-carboxylate synthetase associated mRNA sequence Length = 2417 Score = 44.1 bits (22), Expect = 0.54 Identities = 46/54 (85%) Strand = Plus / Minus Query: 417 cccatcacagaaccttgtgcttgcattatggaacacagcagcactatcaacttg 470 |||||||| ||| || ||||||||||| || || ||||||||||| || ||||| Sbjct: 2016 cccatcactgaatctggtgcttgcattgtgaaaaacagcagcactgtctacttg 1963 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 523 tgtgcacttccataacgatttatatggtcaattgctg 559 |||||||||||||| |||||||||| ||||| |||| Sbjct: 1910 tgtgcacttccatacagatttatatgatcaatagctg 1874
>gb|AC110209.11| Mus musculus chromosome 12, clone RP23-279O18, complete sequence Length = 177587 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 559 gactgtatatcatcaacaaat 579 ||||||||||||||||||||| Sbjct: 85928 gactgtatatcatcaacaaat 85948
>gb|AC146613.3| Mus musculus BAC clone RP23-36P1 from chromosome 18, complete sequence Length = 197939 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 tcattgcaaaggaagatcctt 263 ||||||||||||||||||||| Sbjct: 66423 tcattgcaaaggaagatcctt 66403
>gb|AC137693.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1111_B01, complete sequence Length = 136068 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 tcggttgtgataatacaatct 519 ||||||||||||||||||||| Sbjct: 63680 tcggttgtgataatacaatct 63700
>emb|AL158824.11| Human DNA sequence from clone RP11-165N19 on chromosome 9 Contains a ribosomal protein L29 (RPL29) pseudogene, the 3' end of the gene for regulator of differentiation 1 (ROD1), a novel gene containing DKFZP761E1824, a heat shock 10 KDa protein 1 (HSPE1) pseudogene and a CpG island, complete sequence Length = 147345 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 558 tgactgtatatcatcaacaaa 578 ||||||||||||||||||||| Sbjct: 68967 tgactgtatatcatcaacaaa 68987
>ref|XM_701764.1| PREDICTED: Danio rerio similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 7 (LOC557186), mRNA Length = 3262 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 352 acaggtccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctag 404 ||||| ||||||||||| || || | ||||| ||||||||||| |||||||| Sbjct: 2331 acaggaccacgggcatgaatacgggcagtgctgatgccaacctccgcacctag 2279
>ref|XM_701763.1| PREDICTED: Danio rerio similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 6 (LOC557186), mRNA Length = 3234 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 352 acaggtccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctag 404 ||||| ||||||||||| || || | ||||| ||||||||||| |||||||| Sbjct: 2303 acaggaccacgggcatgaatacgggcagtgctgatgccaacctccgcacctag 2251
>ref|XM_701762.1| PREDICTED: Danio rerio similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 5 (LOC557186), mRNA Length = 3262 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 352 acaggtccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctag 404 ||||| ||||||||||| || || | ||||| ||||||||||| |||||||| Sbjct: 2331 acaggaccacgggcatgaatacgggcagtgctgatgccaacctccgcacctag 2279
>ref|XM_701761.1| PREDICTED: Danio rerio similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 4 (LOC557186), mRNA Length = 3258 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 352 acaggtccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctag 404 ||||| ||||||||||| || || | ||||| ||||||||||| |||||||| Sbjct: 2327 acaggaccacgggcatgaatacgggcagtgctgatgccaacctccgcacctag 2275
>ref|XM_701760.1| PREDICTED: Danio rerio similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 3 (LOC557186), mRNA Length = 3271 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 352 acaggtccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctag 404 ||||| ||||||||||| || || | ||||| ||||||||||| |||||||| Sbjct: 2340 acaggaccacgggcatgaatacgggcagtgctgatgccaacctccgcacctag 2288
>ref|XM_701759.1| PREDICTED: Danio rerio similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 2 (LOC557186), mRNA Length = 3274 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 352 acaggtccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctag 404 ||||| ||||||||||| || || | ||||| ||||||||||| |||||||| Sbjct: 2343 acaggaccacgggcatgaatacgggcagtgctgatgccaacctccgcacctag 2291
>ref|XM_677993.1| PREDICTED: Danio rerio similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 1 (LOC557186), mRNA Length = 3289 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 352 acaggtccacgggcatgtatgcgccctgtgcttatgccaacctctgcacctag 404 ||||| ||||||||||| || || | ||||| ||||||||||| |||||||| Sbjct: 2358 acaggaccacgggcatgaatacgggcagtgctgatgccaacctccgcacctag 2306
>emb|BX510312.7| Zebrafish DNA sequence from clone CH211-240B21 in linkage group 5, complete sequence Length = 177177 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cattgtatggataaatcattgtaca 97 |||||||| |||||||||||||||| Sbjct: 147766 cattgtattgataaatcattgtaca 147790
>gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 tcggttgtgataatacaatct 519 ||||||||||||||||||||| Sbjct: 8648 tcggttgtgataatacaatct 8668
>gb|AC144559.1| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 tcggttgtgataatacaatct 519 ||||||||||||||||||||| Sbjct: 8648 tcggttgtgataatacaatct 8668
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 499 tcggttgtgataatacaatct 519 ||||||||||||||||||||| Sbjct: 20427559 tcggttgtgataatacaatct 20427539
>gb|AC154226.3| Mus musculus BAC clone RP24-353J14 from chromosome 13, complete sequence Length = 196991 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 553 attgctgactgtatatcatcaacaaattc 581 ||||| ||||||| ||||||||||||||| Sbjct: 24259 attgcagactgtaaatcatcaacaaattc 24231
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 499 tcggttgtgataatacaatct 519 ||||||||||||||||||||| Sbjct: 20737793 tcggttgtgataatacaatct 20737773
>emb|CT010497.9| Mouse DNA sequence from clone RP23-239L12 on chromosome 12, complete sequence Length = 189472 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 559 gactgtatatcatcaacaaat 579 ||||||||||||||||||||| Sbjct: 43005 gactgtatatcatcaacaaat 43025
>gb|AC154355.1| Mus musculus BAC clone RP23-220N4 from 13, complete sequence Length = 168447 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 553 attgctgactgtatatcatcaacaaattc 581 ||||| ||||||| ||||||||||||||| Sbjct: 67624 attgcagactgtaaatcatcaacaaattc 67596
>emb|CT010470.9| Mouse DNA sequence from clone RP23-313D12 on chromosome 13, complete sequence Length = 199355 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 553 attgctgactgtatatcatcaacaaattc 581 ||||| ||||||| ||||||||||||||| Sbjct: 126080 attgcagactgtaaatcatcaacaaattc 126052
>gb|AC166111.4| Mus musculus BAC clone RP23-68O7 from chromosome 1, complete sequence Length = 185692 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 attatggaacacagcagcac 460 |||||||||||||||||||| Sbjct: 155439 attatggaacacagcagcac 155420
>ref|XM_524439.1| PREDICTED: Pan troglodytes similar to cAMP-specific 3,5-cyclic phosphodiesterase 4A (DPDE2) (PDE46) (LOC469054), mRNA Length = 567 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 369 gagaagggggctttgaagag 350
>gb|AF069491.1|HSPDE4A5 Homo sapiens cAMP specific phosphodiesterase 4A variant pde46 (PDE4A) gene, exon 15 and 15a and alternative splice products, complete cds Length = 3908 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 1381 gagaagggggctttgaagag 1362
>gb|AC091473.2| Mus musculus chromosome X clones RP21-114F21, RP21-430D6 complete sequence Length = 221860 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aacgttctcctgtctttctt 160 |||||||||||||||||||| Sbjct: 173647 aacgttctcctgtctttctt 173666
>gb|AF241726.3| Homo sapiens chromosome X, clones RP5-819E23 and RP1-137P19, Map p11.4, complete sequences Length = 244978 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 atctgtgtgtgcacttccat 535 |||||||||||||||||||| Sbjct: 20592 atctgtgtgtgcacttccat 20611
>gb|BC019864.1| Homo sapiens phosphodiesterase 4A, cAMP-specific (phosphodiesterase E2 dunce homolog, Drosophila), mRNA (cDNA clone MGC:30168 IMAGE:4942336), complete cds Length = 2429 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 1930 gagaagggggctttgaagag 1911
>ref|XM_455582.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F11022g predicted mRNA Length = 2667 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 tcattgcaaaggaagatccttgtg 266 ||||||||||||||||| |||||| Sbjct: 2498 tcattgcaaaggaagattcttgtg 2521
>gb|AY593872.1| Homo sapiens cAMP-specific phosphodiesterase (PDE4A) mRNA, complete cds Length = 2707 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 2481 gagaagggggctttgaagag 2462
>gb|AC129314.4| Mus musculus BAC clone RP23-365D12 from chromosome 1, complete sequence Length = 200605 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 tacatatatagcatagatgt 27 |||||||||||||||||||| Sbjct: 175644 tacatatatagcatagatgt 175663
>gb|AE004177.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 85 of 251 of the complete chromosome Length = 21916 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 agaaccttgtgcttgcatta 444 |||||||||||||||||||| Sbjct: 1189 agaaccttgtgcttgcatta 1170
>gb|AC166996.1| Mus musculus BAC clone RP23-268E1 from chromosome 12, complete sequence Length = 162710 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 tgactgtatatcatcaacaa 577 |||||||||||||||||||| Sbjct: 33128 tgactgtatatcatcaacaa 33147
>emb|AL157766.9| Human DNA sequence from clone RP11-40O20 on chromosome 13q12.11-12.2 Contains the 3' end of the SGCG gene for sarcoglycan gamma (35kD dystrophin-associated glycoprotein), the SACS gene for spastic ataxia of Charlevoix-Saguenay (sacsin), a ribosomal protein large P1 (RPLP1) pseudogene and a CpG island, complete sequence Length = 92693 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cagcaagaatcctctaccct 243 |||||||||||||||||||| Sbjct: 71542 cagcaagaatcctctaccct 71561
>emb|AL096699.11|HS1145L23 Human DNA sequence from clone RP5-1145L23 on chromosome Xp21.1-21.3 Contains part of the DMD gene for dystrophin (muscular dystrophy, Duchenne and Becker types) and a novel gene, complete sequence Length = 203006 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 aaagtatctgctgacttctt 497 |||||||||||||||||||| Sbjct: 63100 aaagtatctgctgacttctt 63081
>emb|BX537139.17| Zebrafish DNA sequence from clone DKEY-46K9 in linkage group 9, complete sequence Length = 243063 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 gctgactgtatatcatcaacaaat 579 ||||||||||||||| |||||||| Sbjct: 15211 gctgactgtatatcaccaacaaat 15188
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 tcattgcaaaggaagatccttgtg 266 ||||||||||||||||| |||||| Sbjct: 1016383 tcattgcaaaggaagattcttgtg 1016360
>emb|CR378665.1| Photobacterium profundum SS9; segment 3/12 Length = 347213 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 atatcatcaacaaattcgag 584 |||||||||||||||||||| Sbjct: 136751 atatcatcaacaaattcgag 136732
>emb|BX571866.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 8/17 Length = 349652 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tatggataaatcattgtaca 97 |||||||||||||||||||| Sbjct: 315372 tatggataaatcattgtaca 315353
>gb|AC011461.5| Homo sapiens chromosome 19 clone CTC-429L19, complete sequence Length = 100680 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 11333 gagaagggggctttgaagag 11314
>ref|NM_031179.1| Mus musculus splicing factor 3b, subunit 1 (Sf3b1), mRNA Length = 6232 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 attatggaacacagcagcac 460 |||||||||||||||||||| Sbjct: 4467 attatggaacacagcagcac 4486
>ref|NM_006202.1| Homo sapiens phosphodiesterase 4A, cAMP-specific (phosphodiesterase E2 dunce homolog, Drosophila) (PDE4A), mRNA Length = 4255 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 2049 gagaagggggctttgaagag 2030
>gb|AF073745.2|AF073745 Homo sapiens cyclic AMP-specific phosphodiesterase HSPDE4A10 (PDE4A) mRNA, complete cds Length = 2478 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 2280 gagaagggggctttgaagag 2261
>gb|S75213.1| type-IVA cyclic AMP specific phosphodiesterase HPDE4A [human, T-cells, mRNA Partial, 2319 nt] Length = 2319 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 1807 gagaagggggctttgaagag 1788
>dbj|AK077993.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030498N11 product:splicing factor 3b, subunit 1, 155 kDa, full insert sequence Length = 2233 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 attatggaacacagcagcac 460 |||||||||||||||||||| Sbjct: 474 attatggaacacagcagcac 493
>dbj|AK048521.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130069B05 product:splicing factor 3b, subunit 1, 155 kDa, full insert sequence Length = 3352 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 attatggaacacagcagcac 460 |||||||||||||||||||| Sbjct: 1605 attatggaacacagcagcac 1624
>gb|AC149412.2| Phakopsora pachyrhizi clone JGIAFNA-69I18, complete sequence Length = 37632 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 atcctctaccctcattgcaa 251 |||||||||||||||||||| Sbjct: 25380 atcctctaccctcattgcaa 25399
>gb|AY618547.1| Homo sapiens cyclic AMP phosphodiesterase PDE4A11 (PDE4A) mRNA, partial cds, alternatively spliced Length = 2583 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 2385 gagaagggggctttgaagag 2366
>gb|L20967.1|HUMPDEC Homo sapiens phosphodiesterase gene, partial cds Length = 3131 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 2463 gagaagggggctttgaagag 2444
>gb|AC074367.6| Homo sapiens BAC clone RP11-261A24 from 2, complete sequence Length = 102105 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 atgcaattctacagttacaa 51 |||||||||||||||||||| Sbjct: 50379 atgcaattctacagttacaa 50360
>gb|AC092969.7| Homo sapiens 3 BAC RP11-561L3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180773 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gttctcctgtctttcttcat 163 |||||||||||||||||||| Sbjct: 91210 gttctcctgtctttcttcat 91191
>gb|AC108391.14| Mus musculus chromosome 1, clone RP23-16N14, complete sequence Length = 257730 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 attatggaacacagcagcac 460 |||||||||||||||||||| Sbjct: 109492 attatggaacacagcagcac 109473
>gb|AC175366.1| Pan troglodytes chromosome X clone CH251-499L9 map human ortholog p11.4, complete sequence Length = 217335 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 atctgtgtgtgcacttccat 535 |||||||||||||||||||| Sbjct: 74000 atctgtgtgtgcacttccat 74019
>gb|U68532.1|HSU68532 Homo sapiens cyclic AMP specific phosphodiesterase RD1 (PDE4a) mRNA, complete cds Length = 1963 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 1754 gagaagggggctttgaagag 1735
>gb|U60822.1|HSU60822 Human dystrophin (DMD) gene, exons 7, 8 and 9, and partial cds Length = 112359 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 aaagtatctgctgacttctt 497 |||||||||||||||||||| Sbjct: 81616 aaagtatctgctgacttctt 81635
>gb|U18087.1|HSU18087 Human 3',5'-cyclic AMP phosphodiesterase HPDE4A6 mRNA, complete cds Length = 2091 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 1872 gagaagggggctttgaagag 1853
>gb|U97584.1|HSU97584 Homo sapiens cyclic AMP-specific phosphodiesterase HSPDE4A1A (PDE4A) mRNA, complete cds Length = 1965 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 1767 gagaagggggctttgaagag 1748
>gb|AC147128.3| Mus musculus BAC clone RP24-178K6 from 1, complete sequence Length = 158485 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 tacatatatagcatagatgt 27 |||||||||||||||||||| Sbjct: 6709 tacatatatagcatagatgt 6728
>gb|BC038234.1| Homo sapiens phosphodiesterase 4A, cAMP-specific (phosphodiesterase E2 dunce homolog, Drosophila), mRNA (cDNA clone MGC:46146 IMAGE:5732341), complete cds Length = 2635 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 2071 gagaagggggctttgaagag 2052
>emb|CT476827.2| Pan troglodytes chromosome X BAC RP43-033L16, complete sequence Length = 165984 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 aaagtatctgctgacttctt 497 |||||||||||||||||||| Sbjct: 96238 aaagtatctgctgacttctt 96219
>emb|CR354534.15| Zebrafish DNA sequence from clone CH211-140C18 in linkage group 23, complete sequence Length = 189794 Score = 40.1 bits (20), Expect = 8.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 352 acaggtccacgggcatgtatgcgccctgtgcttatgccaacctctgcaccta 403 ||||| ||||||||||| || || | ||||| ||||||||||| ||||||| Sbjct: 6995 acaggaccacgggcatgaatacgggcagtgctgatgccaacctccgcaccta 7046
>gb|M37744.1|HUMPDEAA Human cyclic AMP (cAMP)-specific phosphodiesterase mRNA, complete cds Length = 2619 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 2131 gagaagggggctttgaagag 2112
>emb|AL807376.4| Mouse DNA sequence from clone RP23-436K3 on chromosome X, complete sequence Length = 203189 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aacgttctcctgtctttctt 160 |||||||||||||||||||| Sbjct: 34980 aacgttctcctgtctttctt 34999
>dbj|AB037890.1| Mus musculus Sf3b1 mRNA for pre-mRNA splicing factor SF3b 155 kDa subunit, complete cds Length = 6232 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 attatggaacacagcagcac 460 |||||||||||||||||||| Sbjct: 4467 attatggaacacagcagcac 4486
>gb|L20965.1|HUMPDEA Human phosphodiesterase mRNA, complete cds Length = 3705 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gagaagggggctttgaagag 195 |||||||||||||||||||| Sbjct: 2578 gagaagggggctttgaagag 2559 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,229,366 Number of Sequences: 3902068 Number of extensions: 5229366 Number of successful extensions: 110245 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 109890 Number of HSP's gapped (non-prelim): 338 length of query: 623 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 600 effective length of database: 17,143,297,704 effective search space: 10285978622400 effective search space used: 10285978622400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
