ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal35g03 |
|---|---|
| Clone Library Name | barley_pub |
>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f) Length = 361 Score = 34.7 bits (78), Expect = 0.20 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 2/95 (2%) Frame = -2 Query: 539 PQNTKPXEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAM--TVPVLTAEGRE 366 P N P A A APV+T++ + + A T ++ P PV+ V A G+ Sbjct: 7 PANVPPATAAAAPAPVVTAAPASAPTPSTPAPTPAATPAASPAPVSSDPAVAAPAAPGQT 66 Query: 365 EQTGKVTMQFLLPSKYAKAVEAPRPTDERVVLREV 261 + Q PS+ A+ P P V L V Sbjct: 67 PASAPAPAQTPAPSQPGPALPGPFPGGRVVRLHPV 101
>POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1874 Score = 33.5 bits (75), Expect = 0.45 Identities = 40/166 (24%), Positives = 57/166 (34%), Gaps = 1/166 (0%) Frame = -2 Query: 539 PQNTKPXEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQ 360 P N P + P +SSS P A P TSS P + +P+ Q Sbjct: 671 PNNPNPSSSAGSNPPPKSSSSDN-----PPAPNKPTPTSSSTTPPSPNLPL--------Q 717 Query: 359 TGKVTMQFLLPSKYAKAVEAPRPTDERVVLREVPERKYAVVRFSGLAGDKVVAEKAEGLK 180 G + FL + + P L +PE K S L D A Sbjct: 718 FGSIHSPFLSDGQLNYSALPPPQDPTNTTLSLLPEPKPPTEVQSPLMADPTCVGPAVSFS 777 Query: 179 AALHKDGHVVTGPFVLS-RYNPPWTLPPLRTNEVMFPVQYSSSGHP 45 + +D T F+ R +PP LP + N ++ V S +P Sbjct: 778 SLYPRDFFPNTASFLTRLRLSPPTPLPMPKNNCLLTAVAPSLHINP 823
>HEBP2_HUMAN (Q9Y5Z4) Heme-binding protein 2 (Protein SOUL) (Placental protein| 23) (PP23) Length = 205 Score = 33.1 bits (74), Expect = 0.58 Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 2/139 (1%) Frame = -2 Query: 491 ITSSSSGSGEAE-PIAMTAPVITSSEPEPVAMTVPVLTAEGREEQTGKVTMQFLLPSKYA 315 + S G E E I MTAPV + EP + E T +T+ +PS+ Sbjct: 69 LNSYIQGKNEKEMKIKMTAPVTSYVEPGSGPFS----------EST--ITISLYIPSE-- 114 Query: 314 KAVEAPRPTDERVVLREVPERKYAVVRFSGLAGDKVVAEKAEGLKAALHKDGHVVTGP-F 138 + + PRP + V + + E V F G + + E+ L + L +DG V + Sbjct: 115 QQFDPPRPLESDVFIEDRAEMTVFVRSFDGFSSAQKNQEQLLTLASILREDGKVFDEKVY 174 Query: 137 VLSRYNPPWTLPPLRTNEV 81 + YN P L R NEV Sbjct: 175 YTAGYNSPVKLLN-RNNEV 192
>HIW_DROME (Q9NB71) Ubiquitin ligase protein highwire (EC 6.3.2.-) (Protein| pam/highwire/rpm-1) Length = 5233 Score = 33.1 bits (74), Expect = 0.58 Identities = 22/72 (30%), Positives = 29/72 (40%) Frame = -2 Query: 497 PVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQTGKVTMQFLLPSKY 318 P +T S+SG EP EP+P + P T GR + T FL P+K+ Sbjct: 3129 PPVTPSASGEASPEP-----------EPDPSPVLSPAKTKPGRFLSGHQSTNPFLYPAKH 3177 Query: 317 AKAVEAPRPTDE 282 A E E Sbjct: 3178 ADLAEREAQVQE 3189
>GSA_SYNY3 (Q55665) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 433 Score = 27.3 bits (59), Expect(2) = 0.68 Identities = 20/75 (26%), Positives = 33/75 (44%) Frame = -2 Query: 557 IGAFGKPQNTKPXEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTA 378 +GA+G + E +AM AP +G+ P+AMTA + T+ +L Sbjct: 281 VGAYGGRE-----EIMAMVAPAGPMYQAGTLSGNPLAMTAGI----------KTLEILQK 325 Query: 377 EGREEQTGKVTMQFL 333 G E K+T + + Sbjct: 326 PGSYEYLDKITKRLV 340 Score = 24.3 bits (51), Expect(2) = 0.68 Identities = 13/44 (29%), Positives = 20/44 (45%) Frame = -2 Query: 215 DKVVAEKAEGLKAALHKDGHVVTGPFVLSRYNPPWTLPPLRTNE 84 DK+ +GL AA GH V G + + + + P+R E Sbjct: 333 DKITKRLVDGLLAAAQDAGHEVCGGSISAMFGIFFAPGPVRNYE 376
>LRC50_HUMAN (Q8NEP3) Leucine-rich repeat-containing protein 50| Length = 725 Score = 32.7 bits (73), Expect = 0.76 Identities = 23/77 (29%), Positives = 33/77 (42%) Frame = -2 Query: 542 KPQNTKPXEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREE 363 +P+ T P E + +++PV G GE E T P P P V V +G +E Sbjct: 411 EPEGTLPAETLLLSSPVEVKGEDGDGEPEG---TLPAEAPPPPPP----VEVKGEDGDQE 463 Query: 362 QTGKVTMQFLLPSKYAK 312 G + + LL S K Sbjct: 464 PEGTLPAETLLLSPPVK 480
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 32.3 bits (72), Expect = 0.99 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%) Frame = -2 Query: 545 GKPQNTKPXEAIAMTAPVITSSSSGSGEAEPIAMTA-PVITSSEPE--PVAMTVPVLTAE 375 G+P + P +A +P T +S + +A P A A P T + P+ P+ T P T+ Sbjct: 560 GQPSGSLPAKA----SPQATKASPQATKASPQATKASPQTTKASPQAKPLRATEPSKTSS 615 Query: 374 GREEQTGKVTMQFLLPSKYAKAVEAPRPTDERVVLREVPERKYAVVR 234 +E+ AKA P+P E V P+ K V R Sbjct: 616 SAQEKKTATP---------AKAEPVPKPPPETTVPPGTPKAKSGVKR 653
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 32.3 bits (72), Expect = 0.99 Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = -1 Query: 144 PLRALPLQPAVDAPAA--AHQRGHVPRPVFIIRPPGHP 37 P A P PA APAA A P P + RPPGHP Sbjct: 250 PAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHP 287
>CTA1_BACCI (P94286) Cycloisomaltooligosaccharide glucanotransferase precursor| (EC 2.4.1.-) (CITASE) Length = 972 Score = 32.3 bits (72), Expect = 0.99 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = +1 Query: 25 THRVGVAGWPD--DEYWTGNMTSLVRSGGSVHGGL*RESTKGPVTT 156 T R G+ GW WTG + +RS GS+ G L E++ GP T Sbjct: 892 TFRTGLPGWVHWGVNGWTGVTDTPLRSNGSLDGNLDHETSIGPFAT 937
>HEBP1_HUMAN (Q9NRV9) Heme-binding protein 1 (p22HBP)| Length = 189 Score = 32.3 bits (72), Expect = 0.99 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 3/112 (2%) Frame = -2 Query: 407 VAMTVPVLTAEGREEQTG---KVTMQFLLPSKYAKAVEAPRPTDERVVLREVPERKYAVV 237 + MTVP+ A E K+ + F +P+++ + P P+D+ V + E + Sbjct: 76 MGMTVPISFAVFPNEDGSLQKKLKVWFRIPNQFQS--DPPAPSDKSVKIEEREGITVYSM 133 Query: 236 RFSGLAGDKVVAEKAEGLKAALHKDGHVVTGPFVLSRYNPPWTLPPLRTNEV 81 +F G A + +A L+AAL + + Y+PP P R NE+ Sbjct: 134 QFGGYAKEADYVAQATRLRAALEGTATYRGDIYFCTGYDPPMK-PYGRRNEI 184
>ADRM1_MOUSE (Q9JKV1) Adhesion-regulating molecule 1 precursor (110 kDa cell| membrane glycoprotein) (Gp110) (ARM-1) Length = 407 Score = 31.6 bits (70), Expect = 1.7 Identities = 15/54 (27%), Positives = 27/54 (50%) Frame = -2 Query: 569 LANYIGAFGKPQNTKPXEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEP 408 LA+ +G+ G P ++ + + +A V SSS+ S A P +++ P P Sbjct: 191 LASLLGSSGPPASSSSSSSRSQSAAVTPSSSTSSARATPAPSAPAAASATSPSP 244
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 31.6 bits (70), Expect = 1.7 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 1/98 (1%) Frame = -2 Query: 545 GKPQNTKPXEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGRE 366 G+P + P +A A ++ S +A+P+ + P TSS +PV + Sbjct: 558 GQPSGSLPPKASPQAAKASPQAAKASPQAKPLRASEPSKTSSSAPEKKTGIPV-----KA 612 Query: 365 EQTGKVTMQFLLPSKYAKAVEAPRPTDERV-VLREVPE 255 E K + +P KA + TD V++ VPE Sbjct: 613 EPVPKPPPETAVPPGTPKAKSGVKRTDPATPVVKPVPE 650
>HEBP2_MOUSE (Q9WU63) Heme-binding protein 2 (Protein SOUL)| Length = 205 Score = 31.2 bits (69), Expect = 2.2 Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 2/133 (1%) Frame = -2 Query: 473 GSGEAE-PIAMTAPVITSSEPEPVAMTVPVLTAEGREEQTGKVTMQFLLPSKYAKAVEAP 297 G E E I +TAPV + EP + E T +T+ +PS+ + + P Sbjct: 75 GKNEKEMKIKLTAPVTSYVEPGSSPFS----------EST--ITISLYIPSE--QQPDPP 120 Query: 296 RPTDERVVLREVPERKYAVVRFSGLAGDKVVAEKAEGLKAALHKDGHVVTGP-FVLSRYN 120 RP++ V + + E V F G + + E+ L L ++G V F + Y+ Sbjct: 121 RPSESDVFIEDRAEMTVFVRSFDGFSSGQKNQEQLLTLANILREEGKVFNEKVFYTAGYS 180 Query: 119 PPWTLPPLRTNEV 81 P+ L R NEV Sbjct: 181 SPFQLLD-RNNEV 192
>CMTA2_HUMAN (O94983) Calmodulin-binding transcription activator 2| Length = 1202 Score = 31.2 bits (69), Expect = 2.2 Identities = 24/74 (32%), Positives = 36/74 (48%) Frame = -2 Query: 509 AMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQTGKVTMQFLL 330 A T+P +SSSS SG AEP+ + TS T +L G E++ G +T Sbjct: 286 AHTSPSSSSSSSSSGFAEPLEIRPSPPTSRGGSSRGGTA-ILLLTGLEQRAGGLT----- 339 Query: 329 PSKYAKAVEAPRPT 288 P+++ PRP+ Sbjct: 340 PTRHLAPQADPRPS 353
>HEBP1_PIG (Q5ISC6) Heme-binding protein 1| Length = 189 Score = 31.2 bits (69), Expect = 2.2 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 4/113 (3%) Frame = -2 Query: 407 VAMTVP----VLTAEGREEQTGKVTMQFLLPSKYAKAVEAPRPTDERVVLREVPERKYAV 240 + MTVP V ++G Q K+ + F +P+++ P P+D+ + + E Sbjct: 76 MGMTVPISFAVFPSDGGSLQK-KLKVWFRIPNEFQS--NPPVPSDDSIKIEERESITVYS 132 Query: 239 VRFSGLAGDKVVAEKAEGLKAALHKDGHVVTGPFVLSRYNPPWTLPPLRTNEV 81 ++F G A + +A L+ AL + + + Y+PP P R NEV Sbjct: 133 LQFGGYAKEADYVARAAQLRTALEGIATCRSDVYFCTGYDPPMK-PYGRRNEV 184
>GP10_DICDI (Q06885) Glycoprotein gp100 precursor (P29F8)| Length = 544 Score = 30.8 bits (68), Expect = 2.9 Identities = 24/104 (23%), Positives = 42/104 (40%) Frame = -2 Query: 539 PQNTKPXEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQ 360 P T P ++ T P T+S + + P + P TS+ P P + T+P T + Sbjct: 136 PSQTIP-PTVSPTVPPQTTSPTSKPTSTPTPTSTPTPTST-PTPTSQTIPPPTTTPK--- 190 Query: 359 TGKVTMQFLLPSKYAKAVEAPRPTDERVVLREVPERKYAVVRFS 228 P+K +K + P PT + Y +++F+ Sbjct: 191 ----------PTKSSKPTKTPVPTPTPTRPSSSVSKGYDIIKFN 224
>HMW1_MYCPN (Q50365) Cytadherence high molecular weight protein 1 (Cytadherence| accessory protein 1) Length = 1018 Score = 30.8 bits (68), Expect = 2.9 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 6/100 (6%) Frame = -2 Query: 536 QNTKPXEAIA-MTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEG---- 372 Q +P E A M P + +PI TAP++ EP+ V T P + AE Sbjct: 231 QLEQPVEVQAEMVQPEVAVEPQLEVSLDPIGETAPILEQVEPQAV-QTQPEIPAEQSAVE 289 Query: 371 -REEQTGKVTMQFLLPSKYAKAVEAPRPTDERVVLREVPE 255 + E +V + + P A+ V + T+ V+ + E Sbjct: 290 LQPEPVAEVQSEMVQPEAAAEPVTEAQQTEPTPVVETIAE 329
>HEBP1_MOUSE (Q9R257) Heme-binding protein 1 (p22HBP)| Length = 190 Score = 30.4 bits (67), Expect = 3.8 Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 4/132 (3%) Frame = -2 Query: 464 EAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQTG---KVTMQFLLPSKYAKAVEAPR 294 EA P M T+ + + MTVPV A E K+ + F +P+++ + P Sbjct: 57 EAMPKIMKYVGGTNDKGVGMGMTVPVSFAVFPNEDGSLQKKLKVWFRIPNQFQGS--PPA 114 Query: 293 PTDERVVLREVPERKYAVVRFSGLAGDKVVAEKAEGLKAALHKDGHVVTGP-FVLSRYNP 117 P+DE V + E +F G A + A L+ L G + + Y+P Sbjct: 115 PSDESVKIEEREGITVYSTQFGGYAKEADYVAHATQLRTTLEGTPATYQGDVYYCAGYDP 174 Query: 116 PWTLPPLRTNEV 81 P P R NEV Sbjct: 175 PMK-PYGRRNEV 185
>IF4G_SCHPO (Q10475) Eukaryotic translation initiation factor 4 gamma| (eIF-4-gamma) (eIF-4G) Length = 1403 Score = 30.0 bits (66), Expect = 4.9 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = -2 Query: 488 TSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQTGKVTMQFLLPSK 321 TSS G A P+ TS E P TVP+ Q G +T +PSK Sbjct: 132 TSSQIGKDNAAPVENVNEKSTSQETAPPVSTVPI--------QFGSITRNAAIPSK 179
>TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-like protein)| Length = 4289 Score = 30.0 bits (66), Expect = 4.9 Identities = 32/117 (27%), Positives = 45/117 (38%) Frame = -2 Query: 524 PXEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQTGKVT 345 P A+ +TAP S + + MT ITS ++ TVP E Q Sbjct: 2246 PVSAVGVTAPEEESPDAPLAKLRLGQMTVRDITSDSLS-LSWTVP-------EGQFDHFL 2297 Query: 344 MQFLLPSKYAKAVEAPRPTDERVVLREVPERKYAVVRFSGLAGDKVVAEKAEGLKAA 174 +QF KAV P D + P+ KY + + G +V A GL A+ Sbjct: 2298 VQFKNGDGQPKAVRVPGHEDGVTISGLEPDHKYKMNLYGFHGGQRVGPVSAVGLTAS 2354
>IPF1_HUMAN (P52945) Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum| homeobox 1) (PDX-1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose-sensitive factor) (GSF) Length = 283 Score = 30.0 bits (66), Expect = 4.9 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -1 Query: 120 PAVDAPAAAHQRGHVPRPVFIIRPPGHPHP 31 P D PA AH H+P + + PP P P Sbjct: 72 PLADDPAVAHLHHHLPAQLALPHPPAGPFP 101
>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2| Length = 954 Score = 29.6 bits (65), Expect = 6.4 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -3 Query: 145 APSCSPATTRRGRSRRCAPTRSCSPSSIHHPATRPPPP 32 APS +PA+T AP R SP+S H A P P Sbjct: 69 APS-APASTSSSAPTPAAPARQASPASAHQQAPTPGAP 105
>ILVD_MYCLE (O06069) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 564 Score = 29.6 bits (65), Expect = 6.4 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 4/71 (5%) Frame = -2 Query: 293 PTDERVVLREVPERKYAVVRFSGLAGD--KVVAEKAEGLKAALH--KDGHVVTGPFVLSR 126 PT +LR AVV+ +GL D + A +G +AAL KDG + G V+ R Sbjct: 383 PTGGITILRGSLAPDGAVVKTAGLDSDVFEGTARVFDGERAALDALKDGTIAKGDVVVIR 442 Query: 125 YNPPWTLPPLR 93 Y P P +R Sbjct: 443 YEGPKGGPGMR 453
>PHC1_HUMAN (P78364) Polyhomeotic-like protein 1 (hPH1) (Early development| regulatory protein 1) Length = 1004 Score = 29.6 bits (65), Expect = 6.4 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 11/108 (10%) Frame = -2 Query: 545 GKPQNTKPXEAIAMT-APVITSS---SSGSGEAEPIAMTAP-------VITSSEPEPVAM 399 G Q P A MT APV ++ G+ + P+ P V +P+ +A+ Sbjct: 580 GALQECPPTLAPGMTLAPVQGTAHVVKGGATTSSPVVAQVPAAFYMQSVHLPGKPQTLAV 639 Query: 398 TVPVLTAEGREEQTGKVTMQFLLPSKYAKAVEAPRPTDERVVLREVPE 255 A+ EE+ T+ +LP+K + E+P+ DE+ L E E Sbjct: 640 K---RKADSEEERDDVSTLGSMLPAKASPVAESPKVMDEKSSLGEKAE 684
>PMP20_CHLPN (Q9Z812) Probable outer membrane protein pmp20 precursor| (Polymorphic membrane protein 20) Length = 1723 Score = 29.6 bits (65), Expect = 6.4 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = -2 Query: 518 EAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSE 417 +A + TAPV++SS++ + A P A APV +++ Sbjct: 534 KAASNTAPVVSSSTTAASPAVPAAAAAPVTNAAK 567
>TERM_ADEB3 (O55439) DNA terminal protein (Bellett protein) (pTP protein)| Length = 663 Score = 29.6 bits (65), Expect = 6.4 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = -2 Query: 452 IAMTAPVITSSEPEPVAMTVPVLTAEGREEQTGKVTMQFLLPSKYAKAVEA 300 +A AP S PEPV + +P L E EE+ + L P +A+ V A Sbjct: 377 VARPAPPSPSPSPEPVELEMPPLEGEEEEEE------EELPPRSFAEEVRA 421
>IPF1_RAT (P52947) Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox| 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) Length = 283 Score = 29.6 bits (65), Expect = 6.4 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -1 Query: 120 PAVDAPAAAHQRGHVPRPVFIIRPPGHPHP 31 P D PA AH H+P + + PP P P Sbjct: 72 PLADDPAGAHLHHHLPAQLGLAHPPPGPFP 101
>SWR1_GIBZE (Q4IAK7) Helicase SWR1 (EC 3.6.1.-)| Length = 1691 Score = 29.3 bits (64), Expect = 8.4 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -3 Query: 133 SPATTRRGRSRRCAPTRSCSPSSIHHPATRPPPP 32 +PA+T + S++ TR+ S S+ T PPPP Sbjct: 174 APASTPKSASKKPTETRTSSRSTRRRSPTPPPPP 207
>SGS3_DROYA (P13728) Salivary glue protein Sgs-3 precursor| Length = 263 Score = 29.3 bits (64), Expect = 8.4 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -3 Query: 97 CAPTRSCSPSSIHHPATRPPPP 32 CAPT + + ++ P TRPPPP Sbjct: 43 CAPTTTTTTTTTCAPPTRPPPP 64
>TNNI3_CAEEL (Q9XUN9) Troponin I 3 (TnI 3)| Length = 260 Score = 29.3 bits (64), Expect = 8.4 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -2 Query: 464 EAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQ 360 EA P+ + APV +EPEP A E EE+ Sbjct: 219 EAAPVELAAPVEPEAEPEPEAAEPAAEEPEAEEEE 253 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,432,872 Number of Sequences: 219361 Number of extensions: 1062855 Number of successful extensions: 6552 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 5949 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6528 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
