ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal35f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1PLSB_HUMAN (Q9HCL2) Glycerol-3-phosphate acyltransferase, mitoch... 35 0.094
2PLSB_MOUSE (Q61586) Glycerol-3-phosphate acyltransferase, mitoch... 32 0.80
3PLSB_RAT (P97564) Glycerol-3-phosphate acyltransferase, mitochon... 32 0.80
4XISC_ANASP (Q44217) Excisase C (HupL element site-specific recom... 31 1.4
5ERA_STRR6 (P0A3C4) GTP-binding protein era homolog 30 3.0
6ERA_STRPN (P0A3C3) GTP-binding protein era homolog 30 3.0
7ERA_STRGC (O24756) GTP-binding protein era homolog 30 3.0
8PIPNA_RAT (P16446) Phosphatidylinositol transfer protein alpha i... 29 3.9
9PIPNA_MOUSE (P53810) Phosphatidylinositol transfer protein alpha... 29 3.9
10CR023_HUMAN (Q8NB54) Protein C18orf23 29 3.9
11PIPNA_RABIT (P48738) Phosphatidylinositol transfer protein alpha... 29 3.9
12PIPNA_HUMAN (Q00169) Phosphatidylinositol transfer protein alpha... 29 3.9
13NU2M_CHLRE (P08740) NADH-ubiquinone oxidoreductase chain 2 (EC 1... 28 6.7
14ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc fi... 28 6.7
15CR015_HUMAN (Q96N68) Protein C18orf15 28 6.7
16GLMS_LEPIN (Q8EZQ1) Glucosamine--fructose-6-phosphate aminotrans... 28 6.7
17GLMS_LEPIC (Q72V57) Glucosamine--fructose-6-phosphate aminotrans... 28 6.7
18CAT_CLODI (P11504) Chloramphenicol acetyltransferase (EC 2.3.1.2... 28 8.8
19CAT2_CLOPE (P26826) Chloramphenicol acetyltransferase (EC 2.3.1.... 28 8.8
20ATR_XENLA (Q9DE14) Serine/threonine-protein kinase atr (EC 2.7.1... 28 8.8
21INHB_DROME (O61643) Inhibin beta chain precursor (Activin beta c... 28 8.8 
>PLSB_HUMAN (Q9HCL2) Glycerol-3-phosphate acyltransferase, mitochondrial|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 828

 Score = 34.7 bits (78), Expect = 0.094
 Identities = 24/85 (28%), Positives = 37/85 (43%)
 Frame = -3

Query: 331 MQERVPGQVRELCPDGDADLRERAYNAGCRDEGHPR*LLDTIEYSAMYHFHSAVALSIFN 152
           +QE +     EL PDG A  + +A N   +        +      AM      V L +FN
Sbjct: 139 VQEAIAEVAAELNPDGSAQQQSKAVNKVKKKAKRILQEMVATVSPAMIRLTGWVLLKLFN 198

Query: 151 SFY*ILQIHRLSLGLVRMGSTCMFP 77
           SF+  +QIH+  L +V+  +    P
Sbjct: 199 SFFWNIQIHKGQLEMVKAATETNLP 223
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>PLSB_MOUSE (Q61586) Glycerol-3-phosphate acyltransferase, mitochondrial|
           precursor (EC 2.3.1.15) (GPAT) (P90)
          Length = 827

 Score = 31.6 bits (70), Expect = 0.80
 Identities = 23/85 (27%), Positives = 35/85 (41%)
 Frame = -3

Query: 331 MQERVPGQVRELCPDGDADLRERAYNAGCRDEGHPR*LLDTIEYSAMYHFHSAVALSIFN 152
           +QE +     EL PDG A  + +A     R        +       M      V L +FN
Sbjct: 139 VQEAIAEVAAELNPDGSAQQQSKAIQKVKRKARKILQEMVATVSPGMIRLTGWVLLKLFN 198

Query: 151 SFY*ILQIHRLSLGLVRMGSTCMFP 77
           SF+  +QIH+  L +V+  +    P
Sbjct: 199 SFFWNIQIHKGQLEMVKAATETNLP 223
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>PLSB_RAT (P97564) Glycerol-3-phosphate acyltransferase, mitochondrial|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 828

 Score = 31.6 bits (70), Expect = 0.80
 Identities = 23/85 (27%), Positives = 35/85 (41%)
 Frame = -3

Query: 331 MQERVPGQVRELCPDGDADLRERAYNAGCRDEGHPR*LLDTIEYSAMYHFHSAVALSIFN 152
           +QE +     EL PDG A  + +A     R        +       M      V L +FN
Sbjct: 139 VQEAIAEVAAELNPDGSAQQQSKAIQKVKRKARKILQEMVATVSPGMIRLTGWVLLKLFN 198

Query: 151 SFY*ILQIHRLSLGLVRMGSTCMFP 77
           SF+  +QIH+  L +V+  +    P
Sbjct: 199 SFFWNIQIHKGQLEMVKAATETNLP 223
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>XISC_ANASP (Q44217) Excisase C (HupL element site-specific recombinase)|
          Length = 498

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = -1

Query: 414 IDKSIGAMYRRLQKTLTSDELFPSLWDKCKKEF----LDKYESFVQMVTRIYGNE 262
           +DK     Y+  QKT+TS   FP+     K+ F    L   E+F +++  + GN+
Sbjct: 169 LDKFEEKYYQTRQKTITSQNTFPNYISVIKRNFPLTHLATKENFEEIINSVQGNK 223
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>ERA_STRR6 (P0A3C4) GTP-binding protein era homolog|
          Length = 299

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 408 KSIGAMYRRLQKTLTSDELFPSLWDKCKKEFLDK 307
           K IG+M RR  + +  D++F   W K KK + DK
Sbjct: 252 KKIGSMARRDIELMLGDKVFLETWVKVKKNWRDK 285
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>ERA_STRPN (P0A3C3) GTP-binding protein era homolog|
          Length = 299

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 408 KSIGAMYRRLQKTLTSDELFPSLWDKCKKEFLDK 307
           K IG+M RR  + +  D++F   W K KK + DK
Sbjct: 252 KKIGSMARRDIELMLGDKVFLETWVKVKKNWRDK 285
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>ERA_STRGC (O24756) GTP-binding protein era homolog|
          Length = 299

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 408 KSIGAMYRRLQKTLTSDELFPSLWDKCKKEFLDK 307
           K IG+M RR  + +  D++F   W K KK + DK
Sbjct: 252 KKIGSMARRDIELMLGDKVFLETWVKVKKNWRDK 285
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>PIPNA_RAT (P16446) Phosphatidylinositol transfer protein alpha isoform|
           (PtdIns transfer protein alpha) (PtdInsTP) (PI-TP-alpha)
          Length = 270

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 331 MQERVPGQVRELCPDGDADLRERAYNA 251
           +Q +VP  VR L P+G  ++ E+A+NA
Sbjct: 64  LQSKVPTFVRMLAPEGALNIHEKAWNA 90
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>PIPNA_MOUSE (P53810) Phosphatidylinositol transfer protein alpha isoform|
           (PtdIns transfer protein alpha) (PtdInsTP) (PI-TP-alpha)
          Length = 270

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 331 MQERVPGQVRELCPDGDADLRERAYNA 251
           +Q +VP  VR L P+G  ++ E+A+NA
Sbjct: 64  LQSKVPTFVRMLAPEGALNIHEKAWNA 90
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>CR023_HUMAN (Q8NB54) Protein C18orf23|
          Length = 160

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 121 LSLGLVRMGSTCMFPCQIVCVCDYFCIEM 35
           L + +   GS C+  C  VCVC Y C+ +
Sbjct: 43  LCMTVAYTGSRCLGACVCVCVCLYVCVHV 71
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>PIPNA_RABIT (P48738) Phosphatidylinositol transfer protein alpha isoform|
           (PtdIns transfer protein alpha) (PtdInsTP) (PI-TP-alpha)
          Length = 269

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 331 MQERVPGQVRELCPDGDADLRERAYNA 251
           +Q +VP  VR L P+G  ++ E+A+NA
Sbjct: 63  LQSKVPTFVRMLAPEGALNIHEKAWNA 89
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>PIPNA_HUMAN (Q00169) Phosphatidylinositol transfer protein alpha isoform|
           (PtdIns transfer protein alpha) (PtdInsTP) (PI-TP-alpha)
          Length = 269

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 331 MQERVPGQVRELCPDGDADLRERAYNA 251
           +Q +VP  VR L P+G  ++ E+A+NA
Sbjct: 63  LQSKVPTFVRMLAPEGALNIHEKAWNA 89
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>NU2M_CHLRE (P08740) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 382

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = -1

Query: 198 AQCIIFTVPWPYLYSIHSIEFCRFIAFL*ALLG--WVLHVCFLVKLYVCV 55
           A CI+  V    L S HS E   F+  L A +G  +++H C LV  YVC+
Sbjct: 51  ALCILTVV---LLQSFHSFEALLFL--LLAYIGQLYMMHSCNLVSFYVCL 95
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>ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc finger protein)|
          Length = 2025

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 345  SLWDKCKKEFLDKYESFVQMVTRIYGNEPIMPVAEMRDTL 226
            S+ D+   +  D   SF+Q +TR+Y N+P   V+   DTL
Sbjct: 1472 SVVDQIDPKSRDSTYSFLQPLTRLYQNKPYEIVSPKTDTL 1511
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>CR015_HUMAN (Q96N68) Protein C18orf15|
          Length = 181

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 130 IHRLSLGLVRMGSTCMFPCQIVCVCDYFCIEMDVAVVCC 14
           +H  SL +V M   CM  C  VC C Y C+ + V +  C
Sbjct: 119 VHPQSLTVVCM-CACMCVCVHVCACVYVCMCVLVCMCAC 156
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>GLMS_LEPIN (Q8EZQ1) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (Hexosephosphate
           aminotransferase) (D-fructose-6-phosphate
           amidotransferase) (GFAT)
           (L-glutamine-D-fructose-6-phosphate amidotransferase)
           (Glucosamine-6-ph
          Length = 609

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -1

Query: 375 KTLTSDELFPSLWDKCKKEFLDKYESFVQMVTRIYGNEPIMPVAE 241
           ++LT  E+ P L ++ KK      +SF+++  +I+G   I  V E
Sbjct: 120 QSLTDTEVLPHLLEESKKNGKSNKDSFLELFGKIHGKWAISSVFE 164
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>GLMS_LEPIC (Q72V57) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (Hexosephosphate
           aminotransferase) (D-fructose-6-phosphate
           amidotransferase) (GFAT)
           (L-glutamine-D-fructose-6-phosphate amidotransferase)
           (Glucosamine-6-ph
          Length = 609

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -1

Query: 375 KTLTSDELFPSLWDKCKKEFLDKYESFVQMVTRIYGNEPIMPVAE 241
           ++LT  E+ P L ++ KK      +SF+++  +I+G   I  V E
Sbjct: 120 QSLTDTEVLPHLLEESKKNGKSNKDSFLELFGKIHGKWAISSVFE 164
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>CAT_CLODI (P11504) Chloramphenicol acetyltransferase (EC 2.3.1.28) (CAT)|
          Length = 212

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = -1

Query: 357 ELFPSLWDKCK---KEFLDKYESFVQMVTRIYGN 265
           E F SLW +CK   K FL  YES  Q     YGN
Sbjct: 92  ETFSSLWTECKSDFKSFLADYESDTQR----YGN 121
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>CAT2_CLOPE (P26826) Chloramphenicol acetyltransferase (EC 2.3.1.28) (CAT)|
          Length = 207

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = -1

Query: 357 ELFPSLWDKCK---KEFLDKYESFVQMVTRIYGN 265
           E F SLW +CK   K FL  YES  Q     YGN
Sbjct: 92  ETFSSLWTECKSDFKSFLADYESDTQR----YGN 121
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>ATR_XENLA (Q9DE14) Serine/threonine-protein kinase atr (EC 2.7.11.1) (Ataxia|
            telangiectasia and Rad3-related protein) (Xatr)
          Length = 2654

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -2

Query: 230  PSLASRYN*VQRNVSFSQCRGPIYIQFILLNFADSS 123
            P L +RY   ++ V++S+ + PIY+  +  NFAD S
Sbjct: 1471 PHLNTRYKSSRKAVNWSRVKKPIYLSKLGNNFADWS 1506
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>INHB_DROME (O61643) Inhibin beta chain precursor (Activin beta chain)|
          Length = 946

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 97 GSTCMFPCQIVCVCDYFCIEMDVAVVCC 14
          GS C F CQ +C C   C  + V   CC
Sbjct: 18 GSRCFFNCQCIC-CRQGCCVVVVKCCCC 44


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,114,078
Number of Sequences: 219361
Number of extensions: 1207526
Number of successful extensions: 2867
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2866
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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