| Clone Name | rbaal35e24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463026.1| Oryza sativa (japonica cultivar-group), OSJNBa0008D12.2 mRNA Length = 1115 Score = 301 bits (152), Expect = 1e-78 Identities = 218/239 (91%), Gaps = 1/239 (0%) Strand = Plus / Minus Query: 209 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattcgttc 268 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 802 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattcagtt 743 Query: 269 gtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgaca 328 |||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 742 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 683 Query: 329 atcttctgaaaatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaaaatt 388 ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 682 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 623 Query: 389 gtgttttacaacatccttgaagttgggtggaaatggtgtgccaagcttctgaggaaata 447 || |||||||| ||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 622 gt-ctttacaacctccttgaagtttggcgggaatggtgtgccaagcttttggggaaata 565
>dbj|AK104547.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C06, full insert sequence Length = 1065 Score = 301 bits (152), Expect = 1e-78 Identities = 218/239 (91%), Gaps = 1/239 (0%) Strand = Plus / Minus Query: 209 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattcgttc 268 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 742 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattcagtt 683 Query: 269 gtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgaca 328 |||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 682 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 623 Query: 329 atcttctgaaaatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaaaatt 388 ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 622 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 563 Query: 389 gtgttttacaacatccttgaagttgggtggaaatggtgtgccaagcttctgaggaaata 447 || |||||||| ||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 562 gt-ctttacaacctccttgaagtttggcgggaatggtgtgccaagcttttggggaaata 505
>dbj|AK099558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034B14, full insert sequence Length = 1071 Score = 301 bits (152), Expect = 1e-78 Identities = 218/239 (91%), Gaps = 1/239 (0%) Strand = Plus / Minus Query: 209 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattcgttc 268 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 759 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattcagtt 700 Query: 269 gtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgaca 328 |||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 699 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 640 Query: 329 atcttctgaaaatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaaaatt 388 ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 639 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 580 Query: 389 gtgttttacaacatccttgaagttgggtggaaatggtgtgccaagcttctgaggaaata 447 || |||||||| ||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 579 gt-ctttacaacctccttgaagtttggcgggaatggtgtgccaagcttttggggaaata 522
>dbj|AK098953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058M06, full insert sequence Length = 1039 Score = 301 bits (152), Expect = 1e-78 Identities = 218/239 (91%), Gaps = 1/239 (0%) Strand = Plus / Minus Query: 209 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattcgttc 268 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 752 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattcagtt 693 Query: 269 gtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgaca 328 |||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 692 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 633 Query: 329 atcttctgaaaatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaaaatt 388 ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 632 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 573 Query: 389 gtgttttacaacatccttgaagttgggtggaaatggtgtgccaagcttctgaggaaata 447 || |||||||| ||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 572 gt-ctttacaacctccttgaagtttggcgggaatggtgtgccaagcttttggggaaata 515
>dbj|AK061735.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D08, full insert sequence Length = 1072 Score = 301 bits (152), Expect = 1e-78 Identities = 218/239 (91%), Gaps = 1/239 (0%) Strand = Plus / Minus Query: 209 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattcgttc 268 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 746 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattcagtt 687 Query: 269 gtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgaca 328 |||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 686 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 627 Query: 329 atcttctgaaaatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaaaatt 388 ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 626 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 567 Query: 389 gtgttttacaacatccttgaagttgggtggaaatggtgtgccaagcttctgaggaaata 447 || |||||||| ||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 566 gt-ctttacaacctccttgaagtttggcgggaatggtgtgccaagcttttggggaaata 509
>ref|XM_480217.1| Oryza sativa (japonica cultivar-group), mRNA Length = 426 Score = 276 bits (139), Expect = 6e-71 Identities = 202/222 (90%), Gaps = 1/222 (0%) Strand = Plus / Minus Query: 209 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattcgttc 268 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| | Sbjct: 410 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattcagtt 351 Query: 269 gtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgaca 328 |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 350 gtaaacagaatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 291 Query: 329 atcttctgaaaatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaaaatt 388 |||||||||||| ||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 290 atcttctgaaaactggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 231 Query: 389 gtgttttacaacatccttgaagttgggtggaaatggtgtgcc 430 || |||||||| ||||||||||| || || ||||||||||| Sbjct: 230 gt-ctttacaacctccttgaagtttggcgggaatggtgtgcc 190
>gb|BT016208.1| Zea mays clone Contig41 mRNA sequence Length = 1041 Score = 256 bits (129), Expect = 5e-65 Identities = 228/260 (87%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 188 tctcagtagggaacgatgattgattcgatgagctcctggagaggagccagctctttcttg 247 |||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| |||||| Sbjct: 235 tctcagtaaggaacgatgatggattcaatgagctcctggagtggagccagctccttcttg 294 Query: 248 tcaatcagcccaaattcgttcgtaaacagaatgaagtgcttgaagcaggtgttaagatga 307 |||||||| ||||| || || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 295 tcaatcaggccaaactcatttgtaaacagaatgaagtgcttgaaacaggtattgagatgg 354 Query: 308 gcctcttccttgaggctgacaatcttctgaaaatgggaatggtatatgtgggcataaaca 367 ||||| || || ||||| ||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 355 gcctcctctttaaggctaacaatcttctggaaatgcgagtggtatatgtgggcataaaca 414 Query: 368 cnaaacaagcgcttgaaaattgtgttttacaacatccttgaagttgggtggaaatggtgt 427 | ||||||||||||||| || || || || || ||||||||||| ||||| |||||||| Sbjct: 415 cgaaacaagcgcttgaatatcgt-cttcactacttccttgaagtttggtgggaatggtgt 473 Query: 428 gccaagcttctgaggaaata 447 |||||| || |||||||||| Sbjct: 474 gccaagtttttgaggaaata 493
>gb|AY104572.1| Zea mays PCO087857 mRNA sequence Length = 1332 Score = 256 bits (129), Expect = 5e-65 Identities = 228/260 (87%), Gaps = 1/260 (0%) Strand = Plus / Minus Query: 188 tctcagtagggaacgatgattgattcgatgagctcctggagaggagccagctctttcttg 247 |||||||| ||||||||||| ||||| |||||||||||||| ||||||||||| |||||| Sbjct: 866 tctcagtaaggaacgatgatggattcaatgagctcctggagtggagccagctccttcttg 807 Query: 248 tcaatcagcccaaattcgttcgtaaacagaatgaagtgcttgaagcaggtgttaagatga 307 |||||||| ||||| || || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 806 tcaatcaggccaaactcatttgtaaacagaatgaagtgcttgaaacaggtattgagatgg 747 Query: 308 gcctcttccttgaggctgacaatcttctgaaaatgggaatggtatatgtgggcataaaca 367 ||||| || || ||||| ||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 746 gcctcctctttaaggctaacaatcttctggaaatgcgagtggtatatgtgggcataaaca 687 Query: 368 cnaaacaagcgcttgaaaattgtgttttacaacatccttgaagttgggtggaaatggtgt 427 | ||||||||||||||| || || || || || ||||||||||| ||||| |||||||| Sbjct: 686 cgaaacaagcgcttgaatatcgt-cttcactacttccttgaagtttggtgggaatggtgt 628 Query: 428 gccaagcttctgaggaaata 447 |||||| || |||||||||| Sbjct: 627 gccaagtttttgaggaaata 608
>gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genomic sequence, complete sequence Length = 167239 Score = 212 bits (107), Expect = 7e-52 Identities = 149/162 (91%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 269 gtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgaca 328 |||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 165629 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 165688 Query: 329 atcttctgaaaatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaaaatt 388 ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 165689 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 165748 Query: 389 gtgttttacaacatccttgaagttgggtggaaatggtgtgcc 430 || |||||||| ||||||||||| || || ||||||||||| Sbjct: 165749 gt-ctttacaacctccttgaagtttggcgggaatggtgtgcc 165789 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 209 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattc 264 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 165434 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattc 165489
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 212 bits (107), Expect = 7e-52 Identities = 149/162 (91%), Gaps = 1/162 (0%) Strand = Plus / Minus Query: 269 gtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgaca 328 |||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 20919649 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 20919590 Query: 329 atcttctgaaaatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaaaatt 388 ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 20919589 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 20919530 Query: 389 gtgttttacaacatccttgaagttgggtggaaatggtgtgcc 430 || |||||||| ||||||||||| || || ||||||||||| Sbjct: 20919529 gt-ctttacaacctccttgaagtttggcgggaatggtgtgcc 20919489 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 209 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattc 264 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 20919844 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattc 20919789 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 281 aagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctgaaaa 340 |||||||||||||| ||| | ||||| ||||| |||||||| ||| ||| |||||||| Sbjct: 16669455 aagtgcttgaagcaagtgctgagatgggcctcctccttgagcttgaggatcatctgaaaa 16669514 Query: 341 tgggaatggtatatgtggg 359 || || ||||| ||||||| Sbjct: 16669515 tgcgagtggtacatgtggg 16669533
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 212 bits (107), Expect = 7e-52 Identities = 149/162 (91%), Gaps = 1/162 (0%) Strand = Plus / Minus Query: 269 gtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgaca 328 |||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 20912678 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 20912619 Query: 329 atcttctgaaaatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaaaatt 388 ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 20912618 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 20912559 Query: 389 gtgttttacaacatccttgaagttgggtggaaatggtgtgcc 430 || |||||||| ||||||||||| || || ||||||||||| Sbjct: 20912558 gt-ctttacaacctccttgaagtttggcgggaatggtgtgcc 20912518 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 209 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattc 264 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 20912873 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattc 20912818 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 281 aagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctgaaaa 340 |||||||||||||| ||| | ||||| ||||| |||||||| ||| ||| |||||||| Sbjct: 16663088 aagtgcttgaagcaagtgctgagatgggcctcctccttgagcttgaggatcatctgaaaa 16663147 Query: 341 tgggaatggtatatgtggg 359 || || ||||| ||||||| Sbjct: 16663148 tgcgagtggtacatgtggg 16663166
>gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0008D12 map MAP_LOC, complete sequence Length = 167323 Score = 212 bits (107), Expect = 7e-52 Identities = 149/162 (91%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 269 gtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgaca 328 |||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 3274 gtaaacaggatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 3333 Query: 329 atcttctgaaaatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaaaatt 388 ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 3334 atcttctgaaaatgggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 3393 Query: 389 gtgttttacaacatccttgaagttgggtggaaatggtgtgcc 430 || |||||||| ||||||||||| || || ||||||||||| Sbjct: 3394 gt-ctttacaacctccttgaagtttggcgggaatggtgtgcc 3434 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 209 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattc 264 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 3079 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattc 3134
>gb|BT017985.1| Zea mays clone EL01N0525F07.c mRNA sequence Length = 1171 Score = 210 bits (106), Expect = 3e-51 Identities = 223/261 (85%), Gaps = 1/261 (0%) Strand = Plus / Minus Query: 187 ttctcagtagggaacgatgattgattcgatgagctcctggagaggagccagctctttctt 246 ||||||||| ||||||| ||| ||||| ||||||||||| || ||||||||||| || || Sbjct: 941 ttctcagtaaggaacgaagatggattccatgagctcctgaaggggagccagctccttttt 882 Query: 247 gtcaatcagcccaaattcgttcgtaaacagaatgaagtgcttgaagcaggtgttaagatg 306 ||||||||| ||||| || || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 881 gtcaatcaggccaaactcatttgtaaacagaatgaagtgcttgaaacaggtattgagatg 822 Query: 307 agcctcttccttgaggctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 366 ||||| || || ||||| ||||||||||| |||||||| ||||| | |||||||| || Sbjct: 821 ggcctcctctttaaggctaacaatcttctggaaatgggagtggtaggtatgggcatagac 762 Query: 367 acnaaacaagcgcttgaaaattgtgttttacaacatccttgaagttgggtggaaatggtg 426 | |||||| |||||||| ||||| ||||| || ||||||||||| ||||||||||| | Sbjct: 761 ccgaaacaatcgcttgaatattgt-atttactacttccttgaagttcggtggaaatggcg 703 Query: 427 tgccaagcttctgaggaaata 447 ||||||| || |||||||||| Sbjct: 702 tgccaagtttttgaggaaata 682
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 204 bits (103), Expect = 2e-49 Identities = 148/162 (91%), Gaps = 1/162 (0%) Strand = Plus / Minus Query: 269 gtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgaca 328 |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 3720907 gtaaacagaatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 3720848 Query: 329 atcttctgaaaatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaaaatt 388 |||||||||||| ||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 3720847 atcttctgaaaactggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 3720788 Query: 389 gtgttttacaacatccttgaagttgggtggaaatggtgtgcc 430 || |||||||| ||||||||||| || || ||||||||||| Sbjct: 3720787 gt-ctttacaacctccttgaagtttggcgggaatggtgtgcc 3720747 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 209 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattc 264 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 3721101 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattc 3721046
>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 204 bits (103), Expect = 2e-49 Identities = 148/162 (91%), Gaps = 1/162 (0%) Strand = Plus / Minus Query: 269 gtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgaca 328 |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 44404 gtaaacagaatgaagtgcttgaagcacgtgttaagatgggcctcctccttgaggctgaca 44345 Query: 329 atcttctgaaaatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaaaatt 388 |||||||||||| ||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 44344 atcttctgaaaactggagtgatatatgtgggcataaacacgaaacaagcgcttgaaaatt 44285 Query: 389 gtgttttacaacatccttgaagttgggtggaaatggtgtgcc 430 || |||||||| ||||||||||| || || ||||||||||| Sbjct: 44284 gt-ctttacaacctccttgaagtttggcgggaatggtgtgcc 44244 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 209 gattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaattc 264 |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 44598 gattcgatgagctcctggagtggagccagctccttcttgtcaatcaggccaaattc 44543
>ref|NM_123923.3| Arabidopsis thaliana unknown protein AT5G45550 mRNA, complete cds Length = 896 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Minus Query: 203 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 262 ||||| ||||| |||||||| || ||||| || || ||||||||||| ||||| |||||| Sbjct: 702 atgatagattctatgagctcttgtagaggcgcgagttctttcttgtctatcagtccaaat 643 Query: 263 tcgttcgtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgagg 322 || | ||||| || |||||||| |||||||| ||||| |||||||| ||||| || ||| Sbjct: 642 tcatgagtaaagaggatgaagtgtttgaagcaagtgttgagatgagcttcttcttttagg 583 Query: 323 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 366 || || || ||||| ||||| || ||||||||||| |||||||| Sbjct: 582 ctaacgattttctggaaatgagagtggtatatgtgagcataaac 539
>gb|AY117158.1| Arabidopsis thaliana unknown protein (At5g45550) mRNA, complete cds Length = 679 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Minus Query: 203 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 262 ||||| ||||| |||||||| || ||||| || || ||||||||||| ||||| |||||| Sbjct: 635 atgatagattctatgagctcttgtagaggcgcgagttctttcttgtctatcagtccaaat 576 Query: 263 tcgttcgtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgagg 322 || | ||||| || |||||||| |||||||| ||||| |||||||| ||||| || ||| Sbjct: 575 tcatgagtaaagaggatgaagtgtttgaagcaagtgttgagatgagcttcttcttttagg 516 Query: 323 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 366 || || || ||||| ||||| || ||||||||||| |||||||| Sbjct: 515 ctaacgattttctggaaatgagagtggtatatgtgagcataaac 472
>gb|AY045864.1| Arabidopsis thaliana unknown protein (At5g45550) mRNA, complete cds Length = 911 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Minus Query: 203 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 262 ||||| ||||| |||||||| || ||||| || || ||||||||||| ||||| |||||| Sbjct: 700 atgatagattctatgagctcttgtagaggcgcgagttctttcttgtctatcagtccaaat 641 Query: 263 tcgttcgtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgagg 322 || | ||||| || |||||||| |||||||| ||||| |||||||| ||||| || ||| Sbjct: 640 tcatgagtaaagaggatgaagtgtttgaagcaagtgttgagatgagcttcttcttttagg 581 Query: 323 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 366 || || || ||||| ||||| || ||||||||||| |||||||| Sbjct: 580 ctaacgattttctggaaatgagagtggtatatgtgagcataaac 537
>dbj|AK222194.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL24-23-A15 Length = 555 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Minus Query: 203 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 262 ||||| ||||| |||||||| || ||||| || || ||||||||||| ||||| |||||| Sbjct: 277 atgatagattctatgagctcttgtagaggcgcgagttctttcttgtctatcagtccaaat 218 Query: 263 tcgttcgtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgagg 322 || | ||||| || |||||||| |||||||| ||||| |||||||| ||||| || ||| Sbjct: 217 tcatgagtaaagaggatgaagtgtttgaagcaagtgttgagatgagcttcttcttttagg 158 Query: 323 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 366 || || || ||||| ||||| || ||||||||||| |||||||| Sbjct: 157 ctaacgattttctggaaatgagagtggtatatgtgagcataaac 114
>emb|BX832788.1|CNS09Z5E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL12ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 865 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Minus Query: 203 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 262 ||||| ||||| |||||||| || ||||| || || ||||||||||| ||||| |||||| Sbjct: 670 atgatagattctatgagctcttgtagaggcgcgagttctttcttgtctatcagtccaaat 611 Query: 263 tcgttcgtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgagg 322 || | ||||| || |||||||| |||||||| ||||| |||||||| ||||| || ||| Sbjct: 610 tcatgagtaaagaggatgaagtgtttgaagcaagtgttgagatgagcttcttcttttagg 551 Query: 323 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 366 || || || ||||| ||||| || ||||||||||| |||||||| Sbjct: 550 ctaacgattttctggaaatgagagtggtatatgtgagcataaac 507
>gb|AY086730.1| Arabidopsis thaliana clone 27099 mRNA, complete sequence Length = 883 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Minus Query: 203 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 262 ||||| ||||| |||||||| || ||||| || || ||||||||||| ||||| |||||| Sbjct: 700 atgatagattctatgagctcttgtagaggcgcgagttctttcttgtctatcagtccaaat 641 Query: 263 tcgttcgtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgagg 322 || | ||||| || |||||||| |||||||| ||||| |||||||| ||||| || ||| Sbjct: 640 tcatgagtaaagaggatgaagtgtttgaagcaagtgttgagatgagcttcttcttttagg 581 Query: 323 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 366 || || || ||||| ||||| || ||||||||||| |||||||| Sbjct: 580 ctaacgattttctggaaatgagagtggtatatgtgagcataaac 537
>gb|BT014231.1| Lycopersicon esculentum clone 133430F, mRNA sequence Length = 959 Score = 101 bits (51), Expect = 2e-18 Identities = 208/258 (80%), Gaps = 2/258 (0%) Strand = Plus / Minus Query: 190 tcagtagggaacgatgattgattcgatgagctcctggagaggagccagctctttcttgtc 249 |||||| || |||||||| ||||| || | ||| || || |||||||| || |||||||| Sbjct: 794 tcagtatgggacgatgatggattctataatctcttgaagtggagccagttccttcttgtc 735 Query: 250 aatcagcccaaattcgttcgtaaacagaatgaagtgcttgaagcaggtgttaagatgagc 309 |||||| ||||| || | || || || ||||| ||||| ||||| || || | ||| || Sbjct: 734 aatcagtccaaactcatg-gtgaagagtatgaaatgcttaaagcacgtattcaaatgggc 676 Query: 310 ctcttccttgaggctgacaatcttctgaaaatgggaatggtatatgtgggcataaacacn 369 ||| ||||| || || ||||| ||||||||||||||||| || || || ||||| |||| Sbjct: 675 ctcctccttaagactcacaattttctgaaaatgggaatgataaatatgtgcatacacacg 616 Query: 370 aaacaagcgcttgaaaattgtgttttacaacatccttgaagttgggtggaaatggtgtgc 429 ||| | ||||| |||||||| || |||||||||||||||||||||||||| || | | Sbjct: 615 aaagagacgcttaaaaattgt-cttgacaacatccttgaagttgggtggaaacggcgcac 557 Query: 430 caagcttctgaggaaata 447 ||||| | |||||||||| Sbjct: 556 caagcctttgaggaaata 539
>ref|NM_196336.1| Oryza sativa (japonica cultivar-group) putative F-box protein family (OSJNAa0011L09.13), mRNA Length = 3459 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/106 (85%) Strand = Plus / Minus Query: 279 tgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctgaa 338 |||| |||||||||||||||||||| || || |||||||||||||| ||||||||||||| Sbjct: 3370 tgaaatgcttgaagcaggtgttaaggtgggcttcttccttgaggctcacaatcttctgaa 3311 Query: 339 aatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaa 384 |||| | ||||| || || |||||||||| || | ||||||||| Sbjct: 3310 aatgtgtgtggtaaatatgagcataaacacggaaaaggcgcttgaa 3265
>gb|AC122144.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0011L09, complete sequence Length = 121055 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/106 (85%) Strand = Plus / Plus Query: 279 tgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctgaa 338 |||| |||||||||||||||||||| || || |||||||||||||| ||||||||||||| Sbjct: 71424 tgaaatgcttgaagcaggtgttaaggtgggcttcttccttgaggctcacaatcttctgaa 71483 Query: 339 aatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaa 384 |||| | ||||| || || |||||||||| || | ||||||||| Sbjct: 71484 aatgtgtgtggtaaatatgagcataaacacggaaaaggcgcttgaa 71529
>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0058B20 from chromosome 10, complete sequence Length = 156232 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/106 (85%) Strand = Plus / Minus Query: 279 tgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctgaa 338 |||| |||||||||||||||||||| || || |||||||||||||| ||||||||||||| Sbjct: 145864 tgaaatgcttgaagcaggtgttaaggtgggcttcttccttgaggctcacaatcttctgaa 145805 Query: 339 aatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaa 384 |||| | ||||| || || |||||||||| || | ||||||||| Sbjct: 145804 aatgtgtgtggtaaatatgagcataaacacggaaaaggcgcttgaa 145759
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/106 (85%) Strand = Plus / Plus Query: 279 tgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctgaa 338 |||| |||||||||||||||||||| || || |||||||||||||| ||||||||||||| Sbjct: 12774985 tgaaatgcttgaagcaggtgttaaggtgggcttcttccttgaggctcacaatcttctgaa 12775044 Query: 339 aatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaa 384 |||| | ||||| || || |||||||||| || | ||||||||| Sbjct: 12775045 aatgtgtgtggtaaatatgagcataaacacggaaaaggcgcttgaa 12775090
>dbj|AK120220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041G09, full insert sequence Length = 1123 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/106 (85%) Strand = Plus / Minus Query: 279 tgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctgaa 338 |||| |||||||||||||||||||| || || |||||||||||||| ||||||||||||| Sbjct: 798 tgaaatgcttgaagcaggtgttaaggtgggcttcttccttgaggctcacaatcttctgaa 739 Query: 339 aatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaa 384 |||| | ||||| || || |||||||||| || | ||||||||| Sbjct: 738 aatgtgtgtggtaaatatgagcataaacacggaaaaggcgcttgaa 693
>emb|AJ299394.1|CAR299394 Cicer arietinum partial mRNA for hypothetical protein (ORF), clone Can173-1 Length = 875 Score = 93.7 bits (47), Expect = 5e-16 Identities = 185/230 (80%), Gaps = 1/230 (0%) Strand = Plus / Minus Query: 218 agctcctggagaggagccagctctttcttgtcaatcagcccaaattcgttcgtaaacaga 277 ||||| || ||||||||||| || || ||||||||||||||||| || || || || Sbjct: 555 agctcttgaagaggagccagttcctttttgtcaatcagcccaaactcacaagtgaagagt 496 Query: 278 atgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctga 337 || || ||||||||||| ||||| ||||| |||||||| |||||||| ||||| |||||| Sbjct: 495 ataaaatgcttgaagcatgtgtttagatgggcctcttctttgaggctcacaattttctga 436 Query: 338 aaatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaaaattgtgttttac 397 || || ||||| || || || ||||| |||| |||| |||||||| || || || || Sbjct: 435 aagtgagaatgataaatatgagcatatacacggaacagccgcttgaatatcgt-cttcac 377 Query: 398 aacatccttgaagttgggtggaaatggtgtgccaagcttctgaggaaata 447 |||||||| |||||||| |||||||| | |||||| ||||||| |||| Sbjct: 376 gacatccttaaagttgggaggaaatggagaaccaagcctctgagggaata 327
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 93.7 bits (47), Expect = 5e-16 Identities = 91/106 (85%) Strand = Plus / Plus Query: 279 tgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctgaa 338 |||| |||||||||||||||||||| || || |||||||||||||| ||||||||||||| Sbjct: 12782326 tgaaatgcttgaagcaggtgttaaggtgggcttcttccttgaggctcacaatcttctgaa 12782385 Query: 339 aatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaa 384 |||| | ||||| || || |||||||||| || | ||||||||| Sbjct: 12782386 aatgtgtgtggtaaatatgagcataaacacggaaaaggcgcttgaa 12782431
>emb|AJ920380.1| Poa pratensis partial mRNA for Mob1-like protein (mob1 gene) Length = 654 Score = 87.7 bits (44), Expect = 3e-14 Identities = 91/107 (85%) Strand = Plus / Minus Query: 284 tgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctgaaaatgg 343 ||||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 560 tgcttgaagcatgtgttaagatgggcttcttccttgaggctgacaatcttttgaaaatgc 501 Query: 344 gaatggtatatgtgggcataaacacnaaacaagcgcttgaaaattgt 390 | || || || || |||||||||| ||| | |||||||| ||||| Sbjct: 500 gtgtgataaatatgagcataaacacgaaaaagccgcttgaatattgt 454
>emb|BX834019.1|CNS09ZAI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZD04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 812 Score = 79.8 bits (40), Expect = 7e-12 Identities = 133/164 (81%) Strand = Plus / Minus Query: 203 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 262 ||||| ||||| |||||||| || ||||| || || |||||||||| || || |||||| Sbjct: 674 atgatagattctatgagctcttgtagaggcgcgagtactttcttgtctataagtccaaat 615 Query: 263 tcgttcgtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgagg 322 || | ||||| || |||||||| || ||||| || || |||||||| ||||| || ||| Sbjct: 614 tcatgagtaaagaggatgaagtgtttaaagcaagttttgagatgagcttcttcttttagg 555 Query: 323 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 366 || || || ||||| ||||| || ||||||||||| |||||||| Sbjct: 554 ctaacgattttctggaaatgagagtggtatatgtgagcataaac 511
>gb|BT017780.1| Zea mays clone EL01N0503E06.c mRNA sequence Length = 873 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 279 tgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctgaa 338 |||||||||||||||||||||| ||||| |||||||||||||| ||||| ||| ||| | Sbjct: 547 tgaagtgcttgaagcaggtgttgagatgcgcctcttccttgagcctgacgatcacctgga 488 Query: 339 aatgggaatggtatatgtg 357 | || || ||||||||||| Sbjct: 487 agtgcgagtggtatatgtg 469
>dbj|AB018113.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC19 Length = 85020 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 269 gtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgaca 328 ||||| || |||||||| |||||||| ||||| |||||||| ||||| || ||||| || Sbjct: 83935 gtaaagaggatgaagtgtttgaagcaagtgttgagatgagcttcttcttttaggctaacg 83876 Query: 329 atcttctgaaaatgggaatggtatatgtgggcataaac 366 || ||||| ||||| || ||||||||||| |||||||| Sbjct: 83875 attttctggaaatgagagtggtatatgtgagcataaac 83838 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 203 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 262 ||||| ||||| |||||||| || ||||| || || ||||||||||| ||||| |||||| Sbjct: 84233 atgatagattctatgagctcttgtagaggcgcgagttctttcttgtctatcagtccaaat 84174 Query: 263 tc 264 || Sbjct: 84173 tc 84172
>ref|NM_118023.1| Arabidopsis thaliana unknown protein AT4G19050 mRNA, complete cds Length = 4218 Score = 71.9 bits (36), Expect = 2e-09 Identities = 132/164 (80%) Strand = Plus / Minus Query: 203 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 262 ||||| ||||| ||||| || || |||||||| || |||||||||||||| || |||| Sbjct: 4205 atgatagattctatgagttcttgaagaggagcgagttctttcttgtcaatgagaacaaac 4146 Query: 263 tcgttcgtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgagg 322 || | || || || |||||||| |||||||| ||||| |||||||| || || ||||| Sbjct: 4145 tcatgagtgaagaggatgaagtgtttgaagcaagtgttgagatgagcttcctctttgaga 4086 Query: 323 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 366 || || || ||||| ||||| || ||||||||||| || ||||| Sbjct: 4085 ctaactattttctggaaatgagagtggtatatgtgtgcgtaaac 4042
>gb|AY303171.1| Solanum bulbocastanum chromosome 8 clone 177O13, complete sequence Length = 163635 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/147 (81%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 278 atgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctga 337 ||||| ||||| ||||| || || | ||| ||||| ||||| || || ||||| |||||| Sbjct: 117881 atgaaatgcttaaagcacgtattcaaatgggcctcctccttaagactcacaattttctga 117940 Query: 338 aaatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaaaattgtgttttac 397 |||||||| || || || || ||||| |||| ||| | ||||| |||||||| || || Sbjct: 117941 aaatgggagtgataaatatgtgcatacacacgaaagagacgcttaaaaattgtcttg-ac 117999 Query: 398 aacatccttgaagttgggtggaaatgg 424 ||||||||||||||||| ||||||||| Sbjct: 118000 aacatccttgaagttggatggaaatgg 118026
>gb|BT006214.1| Arabidopsis thaliana At4g19050 gene, complete cds Length = 648 Score = 71.9 bits (36), Expect = 2e-09 Identities = 132/164 (80%) Strand = Plus / Minus Query: 203 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 262 ||||| ||||| ||||| || || |||||||| || |||||||||||||| || |||| Sbjct: 635 atgatagattctatgagttcttgaagaggagcgagttctttcttgtcaatgagaacaaac 576 Query: 263 tcgttcgtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgagg 322 || | || || || |||||||| |||||||| ||||| |||||||| || || ||||| Sbjct: 575 tcatgagtgaagaggatgaagtgtttgaagcaagtgttgagatgagcttcctctttgaga 516 Query: 323 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 366 || || || ||||| ||||| || ||||||||||| || ||||| Sbjct: 515 ctaactattttctggaaatgagagtggtatatgtgtgcgtaaac 472
>dbj|AK117341.1| Arabidopsis thaliana At4g19050 mRNA for unknown protein, complete cds, clone: RAFL16-90-M13 Length = 945 Score = 71.9 bits (36), Expect = 2e-09 Identities = 132/164 (80%) Strand = Plus / Minus Query: 203 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaatcagcccaaat 262 ||||| ||||| ||||| || || |||||||| || |||||||||||||| || |||| Sbjct: 743 atgatagattctatgagttcttgaagaggagcgagttctttcttgtcaatgagaacaaac 684 Query: 263 tcgttcgtaaacagaatgaagtgcttgaagcaggtgttaagatgagcctcttccttgagg 322 || | || || || |||||||| |||||||| ||||| |||||||| || || ||||| Sbjct: 683 tcatgagtgaagaggatgaagtgtttgaagcaagtgttgagatgagcttcctctttgaga 624 Query: 323 ctgacaatcttctgaaaatgggaatggtatatgtgggcataaac 366 || || || ||||| ||||| || ||||||||||| || ||||| Sbjct: 623 ctaactattttctggaaatgagagtggtatatgtgtgcgtaaac 580
>gb|AY303170.1| Solanum bulbocastanum chromosome 8 clone CB3A14, complete sequence Length = 79178 Score = 65.9 bits (33), Expect = 1e-07 Identities = 117/144 (81%), Gaps = 1/144 (0%) Strand = Plus / Minus Query: 278 atgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctga 337 ||||| ||||| ||||| || || | ||| ||||| ||||| || || ||||| |||||| Sbjct: 14594 atgaaatgcttaaagcacgtattcaaatgggcctcctccttaagactcacaattttctga 14535 Query: 338 aaatgggaatggtatatgtgggcataaacacnaaacaagcgcttgaaaattgtgttttac 397 |||||||| || || || || ||||| |||| ||| | ||||| |||||||| || || Sbjct: 14534 aaatgggagtgataaatatgtgcatacacacgaaagagacgcttaaaaattgt-cttgac 14476 Query: 398 aacatccttgaagttgggtggaaa 421 ||||||||||||||||| |||||| Sbjct: 14475 aacatccttgaagttggatggaaa 14452
>gb|BT017967.1| Zea mays clone EL01N0523F09.c mRNA sequence Length = 1093 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 281 aagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctgaaaa 340 |||||||||||||| ||||| ||||| || || |||||||| |||| ||| |||| || Sbjct: 734 aagtgcttgaagcaagtgttgagatgcgcatcctccttgagcttgacgatcatctggaag 675 Query: 341 tgggaatggtatatgtg 357 ||||| ||||||||||| Sbjct: 674 tgggagtggtatatgtg 658
>emb|AL161550.2|ATCHRIV50 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 50 Length = 199382 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 278 atgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctga 337 |||||||| |||||||| ||||| |||||||| || || ||||| || || || ||||| Sbjct: 22472 atgaagtgtttgaagcaagtgttgagatgagcttcctctttgagactaactattttctgg 22531 Query: 338 aaatgggaatggtatatgtgggcataaac 366 ||||| || ||||||||||| || ||||| Sbjct: 22532 aaatgagagtggtatatgtgtgcgtaaac 22560 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 203 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaat 252 ||||| ||||| ||||| || || |||||||| || |||||||||||||| Sbjct: 22290 atgatagattctatgagttcttgaagaggagcgagttctttcttgtcaat 22339
>emb|AL021711.2|ATF13C5 Arabidopsis thaliana DNA chromosome 4, BAC clone F13C5 (ESSA project) Length = 119111 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 278 atgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctga 337 |||||||| |||||||| ||||| |||||||| || || ||||| || || || ||||| Sbjct: 103177 atgaagtgtttgaagcaagtgttgagatgagcttcctctttgagactaactattttctgg 103236 Query: 338 aaatgggaatggtatatgtgggcataaac 366 ||||| || ||||||||||| || ||||| Sbjct: 103237 aaatgagagtggtatatgtgtgcgtaaac 103265 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 203 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaat 252 ||||| ||||| ||||| || || |||||||| || |||||||||||||| Sbjct: 102995 atgatagattctatgagttcttgaagaggagcgagttctttcttgtcaat 103044
>emb|AL021687.1|ATT18B16 Arabidopsis thaliana DNA chromosome 4, BAC clone T18B16 (ESSA project) Length = 96574 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 278 atgaagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctga 337 |||||||| |||||||| ||||| |||||||| || || ||||| || || || ||||| Sbjct: 6033 atgaagtgtttgaagcaagtgttgagatgagcttcctctttgagactaactattttctgg 6092 Query: 338 aaatgggaatggtatatgtgggcataaac 366 ||||| || ||||||||||| || ||||| Sbjct: 6093 aaatgagagtggtatatgtgtgcgtaaac 6121 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 203 atgattgattcgatgagctcctggagaggagccagctctttcttgtcaat 252 ||||| ||||| ||||| || || |||||||| || |||||||||||||| Sbjct: 5851 atgatagattctatgagttcttgaagaggagcgagttctttcttgtcaat 5900
>ref|XM_468620.1| Oryza sativa (japonica cultivar-group), mRNA Length = 654 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 281 aagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctgaaaa 340 |||||||||||||| ||| | ||||| ||||| |||||||| ||| ||| |||||||| Sbjct: 560 aagtgcttgaagcaagtgctgagatgggcctcctccttgagcttgaggatcatctgaaaa 501 Query: 341 tgggaatggtatatgtggg 359 || || ||||| ||||||| Sbjct: 500 tgcgagtggtacatgtggg 482
>emb|AJ635583.1| Medicago sativa subsp. falcata mob1 gene for Mob1-like protein, exons 1-3, allele mutant Length = 1693 Score = 54.0 bits (27), Expect = 4e-04 Identities = 111/138 (80%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 284 tgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctgaaaatgg 343 ||||||||||| || || | ||||| |||||||| | || ||||||||||||||| | Sbjct: 1366 tgcttgaagcaagtattcaagtgagcttcttccttcaaactcacaatcttctgaaaacgt 1307 Query: 344 gaatggtatatgtgggcataaacacnaaacaagcgcttgaaaattgtgttttacaacatc 403 || || || ||||| ||||| |||| || || |||||||| ||||| || |||||||| Sbjct: 1306 gagtgataaatgtgagcatatacacggaataatcgcttgaatattgt-cttgacaacatc 1248 Query: 404 cttgaagttgggtggaaa 421 |||||||||||||||| Sbjct: 1247 tctgaagttgggtggaaa 1230
>gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 genomic sequence, complete sequence Length = 129167 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 281 aagtgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctgaaaa 340 |||||||||||||| ||| | ||||| ||||| |||||||| ||| ||| |||||||| Sbjct: 20248 aagtgcttgaagcaagtgctgagatgggcctcctccttgagcttgaggatcatctgaaaa 20307 Query: 341 tgggaatggtatatgtggg 359 || || ||||| ||||||| Sbjct: 20308 tgcgagtggtacatgtggg 20326
>gb|BC066567.1| Danio rerio MOB1, Mps One Binder kinase activator-like 1B (yeast), mRNA (cDNA clone MGC:76936 IMAGE:6524831), complete cds Length = 1600 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 284 tgcttgaagcaggtgttaagatgagcctcttcct 317 ||||||||| ||||||||||||||||||| |||| Sbjct: 847 tgcttgaaggaggtgttaagatgagcctcctcct 814
>gb|BC045979.1| Danio rerio MOB1, Mps One Binder kinase activator-like 1B (yeast), mRNA (cDNA clone MGC:56189 IMAGE:5413687), complete cds Length = 1549 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 284 tgcttgaagcaggtgttaagatgagcctcttcct 317 ||||||||| ||||||||||||||||||| |||| Sbjct: 849 tgcttgaaggaggtgttaagatgagcctcctcct 816
>ref|NM_199914.1| Danio rerio MOB1, Mps One Binder kinase activator-like 1B (yeast) (mobk1b), mRNA Length = 1549 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 284 tgcttgaagcaggtgttaagatgagcctcttcct 317 ||||||||| ||||||||||||||||||| |||| Sbjct: 849 tgcttgaaggaggtgttaagatgagcctcctcct 816
>emb|CR925780.8| Zebrafish DNA sequence from clone CH211-112B19 in linkage group 5, complete sequence Length = 166407 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 284 tgcttgaagcaggtgttaagatgagcctcttcct 317 ||||||||| ||||||||||||||||||| |||| Sbjct: 118545 tgcttgaaggaggtgttaagatgagcctcctcct 118512
>emb|CR847941.14| Zebrafish DNA sequence from clone CH211-275J6 in linkage group 5, complete sequence Length = 151835 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 284 tgcttgaagcaggtgttaagatgagcctcttcct 317 ||||||||| ||||||||||||||||||| |||| Sbjct: 138525 tgcttgaaggaggtgttaagatgagcctcctcct 138492
>emb|AM161645.1| Medicago sativa subsp. falcata mRNA for Mob1-like protein (mob1-B gene) Length = 880 Score = 46.1 bits (23), Expect = 0.098 Identities = 110/138 (79%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 284 tgcttgaagcaggtgttaagatgagcctcttccttgaggctgacaatcttctgaaaatgg 343 ||||||||||| || || | ||||| |||||||| | || ||||||||||||||||| Sbjct: 789 tgcttgaagcaagtattcaagtgagcttcttccttcaaactcacaatcttctgaaaatgt 730 Query: 344 gaatggtatatgtgggcataaacacnaaacaagcgcttgaaaattgtgttttacaacatc 403 || || || ||||| ||||| |||| || || ||||| || ||||| || |||||||| Sbjct: 729 gagtgataaatgtgagcatatacacggaataatcgcttaaatattgt-cttgacaacatc 671 Query: 404 cttgaagttgggtggaaa 421 |||| ||||||||||| Sbjct: 670 tctgaaattgggtggaaa 653
>ref|XM_420601.1| PREDICTED: Gallus gallus similar to MOB1, Mps One Binder kinase activator-like 1A; Mob4A protein (LOC422647), mRNA Length = 1643 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 281 aagtgcttgaagcaggtgttaagatgagcctcttcct 317 |||||||||||| | ||||||||||| ||||| |||| Sbjct: 604 aagtgcttgaaggacgtgttaagatgtgcctcctcct 568
>gb|AC160564.2| Pan troglodytes BAC clone CH251-542C24 from chromosome 5, complete sequence Length = 177047 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 aggagccagctctttcttgtc 249 ||||||||||||||||||||| Sbjct: 1131 aggagccagctctttcttgtc 1151
>gb|AC124497.3| Mus musculus BAC clone RP23-480E8 from chromosome 5, complete sequence Length = 206926 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 380 ttgaaaattgtgttttacaac 400 ||||||||||||||||||||| Sbjct: 13915 ttgaaaattgtgttttacaac 13895
>emb|AL008868.1|CEC53C7 Caenorhabditis elegans Cosmid C53C7, complete sequence Length = 33630 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 ttgaaaattgtgttttacaac 400 ||||||||||||||||||||| Sbjct: 19251 ttgaaaattgtgttttacaac 19271
>gb|AC123054.2| Mus musculus BAC clone RP24-220N11 from 5, complete sequence Length = 174874 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 ttgaaaattgtgttttacaac 400 ||||||||||||||||||||| Sbjct: 19434 ttgaaaattgtgttttacaac 19454
>gb|AC091872.3| Homo sapiens chromosome 5 clone CTD-2515M14, complete sequence Length = 40876 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 aggagccagctctttcttgtc 249 ||||||||||||||||||||| Sbjct: 4903 aggagccagctctttcttgtc 4883
>gb|AC011065.6| Drosophila melanogaster, chromosome 2L, region 33B-33B, BAC clone BACR37P12, complete sequence Length = 181103 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 aatgggaatggtatatgtggg 359 ||||||||||||||||||||| Sbjct: 61669 aatgggaatggtatatgtggg 61649
>emb|CR385763.1| Gallus gallus finished cDNA, clone ChEST196f23 Length = 907 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 281 aagtgcttgaagcaggtgttaagatgagcctcttcct 317 |||||||||||| | ||||||||||| ||||| |||| Sbjct: 697 aagtgcttgaaggacgtgttaagatgtgcctcctcct 661
>gb|AC158171.2| Pan troglodytes BAC clone CH251-434I6 from chromosome unknown, complete sequence Length = 184468 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 aggagccagctctttcttgtc 249 ||||||||||||||||||||| Sbjct: 42457 aggagccagctctttcttgtc 42437
>gb|AC027332.4|AC027332 Homo sapiens chromosome 5 clone CTD-2193I13, complete sequence Length = 155150 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 aggagccagctctttcttgtc 249 ||||||||||||||||||||| Sbjct: 12 aggagccagctctttcttgtc 32
>gb|AE003634.2| Drosophila melanogaster chromosome 2L, section 43 of 83 of the complete sequence Length = 265341 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 aatgggaatggtatatgtggg 359 ||||||||||||||||||||| Sbjct: 96438 aatgggaatggtatatgtggg 96418
>gb|AC006240.1|AC006240 Drosophila melanogaster, chromosome 2L, region 33A3-33B2, P1 clones DS06189, DS04362, and DS07071, complete sequence Length = 170056 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 aatgggaatggtatatgtggg 359 ||||||||||||||||||||| Sbjct: 43340 aatgggaatggtatatgtggg 43360
>gb|U66061.1| Human germline T-cell receptor beta chain TCRBV17S1A1T, TCRBV2S1, TCRBV10S1P, TCRBV29S1P, TCRBV19S1P, TCRBV15S1, TCRBV11S1A1T, HVB relic, TCRBV28S1P, TCRBV34S1, TCRBV14S1, TCRBV3S1, TCRBV4S1A1T, TRY4, TRY5, TRY6, TRY7, TRY8, TCRBD1, TCRBJ1S1, TCRBJ1S2, TCRBJ1S3, TCRBJ1S4, TCRBJ1S5, TCRBJ1S6, TCRBC1, TCRBD2, TCRBJ2S1, TCRBJ2S2, TCRBJ2S3, TCRBJ2S4, TCRBJ2S5, TCRBJ2S6, TCRBJ2S7, TCRBC2, TCRBV20S1A1N2 genes from bases 452324 to 684973 (section 3 of 3) Length = 232650 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 aatcttctgaaaatgggaat 347 |||||||||||||||||||| Sbjct: 73286 aatcttctgaaaatgggaat 73305
>gb|AC101719.10| Mus musculus chromosome 7, clone RP23-294K15, complete sequence Length = 179321 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tatgtcaaagaaatggaaca 77 |||||||||||||||||||| Sbjct: 80582 tatgtcaaagaaatggaaca 80601
>gb|U53337.2| Caenorhabditis elegans cosmid R02E12, complete sequence Length = 39151 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 gaggagccagctctttcttg 247 |||||||||||||||||||| Sbjct: 14712 gaggagccagctctttcttg 14693
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 aaacagaatgaagtgcttga 290 |||||||||||||||||||| Sbjct: 81944 aaacagaatgaagtgcttga 81925
>ref|NG_001333.1| Homo sapiens T cell receptor beta locus (TRB@) on chromosome 7 Length = 684973 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 aatcttctgaaaatgggaat 347 |||||||||||||||||||| Sbjct: 525609 aatcttctgaaaatgggaat 525628
>gb|AF025465.1| Caenorhabditis elegans cosmid K02E7, complete sequence Length = 36535 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 aacatgtacaaacaaataca 34 |||||||||||||||||||| Sbjct: 35305 aacatgtacaaacaaataca 35324
>gb|AC145804.2| Xenopus tropicalis clone CH216-83M4, complete sequence Length = 135836 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 caataagatttgtgccagtaaatt 99 ||||||||||| |||||||||||| Sbjct: 128483 caataagatttttgccagtaaatt 128460
>gb|AC146433.3| Pan troglodytes BAC clone RP43-19C19 from 7, complete sequence Length = 180951 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 aatcttctgaaaatgggaat 347 |||||||||||||||||||| Sbjct: 73235 aatcttctgaaaatgggaat 73254
>gb|AC139576.3| Mus musculus BAC clone RP23-364L23 from chromosome 7, complete sequence Length = 152489 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tatgtcaaagaaatggaaca 77 |||||||||||||||||||| Sbjct: 4535 tatgtcaaagaaatggaaca 4516
>emb|CR954296.5| Zebrafish DNA sequence from clone DKEY-114K23 in linkage group 8, complete sequence Length = 72443 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 acatccttgaagttgggtgg 418 |||||||||||||||||||| Sbjct: 70144 acatccttgaagttgggtgg 70125
>emb|CR387978.12| Zebrafish DNA sequence from clone DKEY-33M5 in linkage group 1, complete sequence Length = 208746 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 aagaaatggaacaataagatttgt 88 |||||| ||||||||||||||||| Sbjct: 36035 aagaaaaggaacaataagatttgt 36012
>gb|AC124775.4| Mus musculus BAC clone RP23-60N3 from 7, complete sequence Length = 234834 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tacaaacaaatacatcacta 40 |||||||||||||||||||| Sbjct: 149668 tacaaacaaatacatcacta 149649
>emb|AL354675.20| Human DNA sequence from clone RP11-217F15 on chromosome 9, complete sequence Length = 180185 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 aaagaaatggaacaataaga 83 |||||||||||||||||||| Sbjct: 82815 aaagaaatggaacaataaga 82834
>emb|AL035404.20|HS144F13 Human DNA sequence from clone RP1-144F13 on chromosome 1p33-34.3 Contains the HEYL gene for hairy/enhancer-of-split related protein with YRPW-like motif, a novel gene, the NT5C1A gene for cytosolic IA 5'-nucleotidase, the HPCAL4 gene for hippocalcin like 4, a novel pseudogene, the 5' end of the PPIE gene for peptidylprolyl isomerase E (cyclophilin E) and six CpG islands, complete sequence Length = 154412 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 gctgacaatcttctgaaaat 341 |||||||||||||||||||| Sbjct: 133625 gctgacaatcttctgaaaat 133606
>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome Length = 1581384 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 aaacaagcgcttgaaaattg 389 |||||||||||||||||||| Sbjct: 398741 aaacaagcgcttgaaaattg 398722
>emb|AL935187.13| Zebrafish DNA sequence from clone DKEY-97C7 in linkage group 4 Contains part of the gene for a novel protein similar to vertebrate atrophin-1 interacting protein (AIP1) and a CpG island, complete sequence Length = 263517 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 actagtagtgtacatgtttt 56 |||||||||||||||||||| Sbjct: 77465 actagtagtgtacatgtttt 77484
>dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome Length = 1166239 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 ttgtgttttacaacatcctt 406 |||||||||||||||||||| Sbjct: 731264 ttgtgttttacaacatcctt 731245
>gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, complete sequence Length = 162877 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 cgatgagctcctggagagga 232 |||||||||||||||||||| Sbjct: 26568 cgatgagctcctggagagga 26587
>gb|AC068714.9| Homo sapiens chromosome 15 clone RP11-315O8 map 15q15, complete sequence Length = 200690 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 38 ctagtagtgtacatgttttttatgtcaa 65 ||||||||||| |||| ||||||||||| Sbjct: 99573 ctagtagtgtatatgtgttttatgtcaa 99546
>gb|AC153887.6| Mus musculus 10 BAC RP23-473N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 165306 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 aataagatttgtgccagtaa 96 |||||||||||||||||||| Sbjct: 83022 aataagatttgtgccagtaa 83003
>gb|AC068042.5| Homo sapiens BAC clone RP11-535B12 from 2, complete sequence Length = 172617 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ttgtgttttacaacatcctt 406 |||||||||||||||||||| Sbjct: 62905 ttgtgttttacaacatcctt 62924
>gb|AC138024.2| Homo sapiens chromosome 1 clone RP5-1099E6, complete sequence Length = 163815 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 gaaaatgggaatggtatatgtggg 359 |||||||||| ||||||||||||| Sbjct: 17775 gaaaatgggagtggtatatgtggg 17798
>gb|AC119429.3| Homo sapiens chromosome 1 clone RP4-723P6, complete sequence Length = 115940 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 gaaaatgggaatggtatatgtggg 359 |||||||||| ||||||||||||| Sbjct: 33243 gaaaatgggagtggtatatgtggg 33266
>emb|BX294008.8| Mouse DNA sequence from clone RP23-28K9 on chromosome X, complete sequence Length = 136485 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 tttttatgtcaaagaaatggaaca 77 ||||||||||||||||||| |||| Sbjct: 85658 tttttatgtcaaagaaatgaaaca 85681
>gb|AC149201.2| Macaca mulatta Try4 (try4) gene, complete cds; trypsinogen (try5) and trypsinogen (try6) pseudogenes, complete sequence; trypsinogen (try7) pseudogene, partial sequence; trypsinogen (try8) pseudogene, complete sequence; try9 (try9) and try10 (try10) genes, complete cds; trypsinogen (try11) pseudogene, complete sequence; try12 (try12), try13 (try13), and try14 (try14) genes, complete cds; trypsinogen (try15) pseudogene, complete sequence; and try16 (try16) gene, complete cds Length = 188583 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 aatcttctgaaaatgggaat 347 |||||||||||||||||||| Sbjct: 2264 aatcttctgaaaatgggaat 2283
>emb|AL929282.5| Zebrafish DNA sequence from clone CH211-163L21, complete sequence Length = 131005 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 acatccttgaagttgggtgg 418 |||||||||||||||||||| Sbjct: 81364 acatccttgaagttgggtgg 81345
>gb|AC010449.7| Homo sapiens chromosome 5 clone CTD-2241P19, complete sequence Length = 80772 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gttttttatgtcaaagaaat 71 |||||||||||||||||||| Sbjct: 68276 gttttttatgtcaaagaaat 68257
>dbj|AP003116.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1241F12 Length = 142424 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 acagaatgaagtgcttgaag 292 |||||||||||||||||||| Sbjct: 77531 acagaatgaagtgcttgaag 77550
>dbj|AP003113.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1747F8 Length = 161402 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 acagaatgaagtgcttgaag 292 |||||||||||||||||||| Sbjct: 157022 acagaatgaagtgcttgaag 157041
>emb|AL713920.14| Mouse DNA sequence from clone RP23-330B20 on chromosome X, complete sequence Length = 156186 Score = 40.1 bits (20), Expect = 6.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 393 tttacaacatccttg-aagttgggtgga 419 ||||||||||||||| |||||||||||| Sbjct: 50981 tttacaacatccttgcaagttgggtgga 51008 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,511,911 Number of Sequences: 3902068 Number of extensions: 4511911 Number of successful extensions: 93686 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 93299 Number of HSP's gapped (non-prelim): 365 length of query: 451 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 429 effective length of database: 17,147,199,772 effective search space: 7356148702188 effective search space used: 7356148702188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)