>YDJ4_SCHPO (P87052) Hypothetical protein C57A10.04 in chromosome I|
          Length = 338

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
 Frame = +3

Query: 282 SILERIKSTNTNWSAP*KRTLGVLMMRISYINQRRRSVG-----KRLLQGLAVDAASLIS 446
           SIL+ I ST  N+S   K+TL  ++M I   +  R ++G     K L Q        +IS
Sbjct: 45  SILQEIISTEYNYSVDLKKTLNEIIMPIEGQSMEREAIGICTCFKTLNQLHTKLYQQMIS 104

Query: 447 SGIPV 461
           SG PV
Sbjct: 105 SGSPV 109

>NISP_LACLA (Q07596) Nisin leader peptide-processing serine protease nisP|
           precursor (EC 3.4.21.-)
          Length = 682

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 566 LAIMFICCSLPXSAAIHGQTEGKQQ 492
           L  +FI CSL  SA +HG+T   QQ
Sbjct: 5   LGFLFIVCSLGLSATVHGETTNSQQ 29

>MYO9B_HUMAN (Q13459) Myosin-9B (Myosin IXb) (Unconventional myosin-9b)|
          Length = 2158

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = -2

Query: 547  AAPCHXQLPSTVKRRENNRERGLLH 473
            AA  H ++PS+ ++RE+ R+RGL H
Sbjct: 1134 AAESHEKVPSSREKRESRRQRGLEH 1158

>MATK_HYDMC (Q8WKM6) Maturase K (Intron maturase)|
          Length = 506

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -1

Query: 188 SKGLSLQASYYYTVLAVC-ECHSYISSRALSVYVKQL 81
           SKG SL  + +   L  C +CH Y+ S+  S+Y+ QL
Sbjct: 286 SKGTSLLMNKWKYYLVNCWQCHFYVWSQPRSIYINQL 322

>CASC5_MOUSE (Q66JQ7) Protein CASC5 (Cancer susceptibility candidate gene 5|
            protein homolog)
          Length = 1612

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -2

Query: 529  QLPSTVKRRE-NNRERGLLHAAGRTGIPLLIRDAASTARPCSSLFPT 392
            Q PST K ++   R+ G+L  AG+  +P L+ + A++     S  PT
Sbjct: 1269 QSPSTQKGQDVARRDEGILAKAGKKALPFLLENVAASTWENESKIPT 1315

>ADRB3_MACMU (Q28524) Beta-3 adrenergic receptor (Beta-3 adrenoceptor) (Beta-3|
           adrenoreceptor)
          Length = 418

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = -2

Query: 358 IISTPNVLFYGALQLVLVLFIRSKILVVVTRQ-KYLSWYHGKY 233
           ++ + +V FY  L L+++LF+ +++ VV TRQ + L W  G++
Sbjct: 205 VLLSSSVSFY--LPLLVMLFVYARVFVVATRQLRLLRWELGRF 245


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,693,922
Number of Sequences: 219361
Number of extensions: 1517969
Number of successful extensions: 4011
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4011
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)