ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7p17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AMAA_BACST (P37112) N-acyl-L-amino acid amidohydrolase (EC 3.5.1... 33 0.73
2GP175_RAT (Q791F6) Integral membrane protein GPR175 (Transmembra... 32 1.6
3GP175_MOUSE (Q99MU1) Integral membrane protein GPR175 (Transmemb... 32 1.6
4LYTS_STRMU (Q8DVB6) Sensor protein lytS (EC 2.7.13.3) 31 3.6
5GP175_HUMAN (Q86W33) Integral membrane protein GPR175 31 3.6
6CF150_HUMAN (Q8N884) Protein C6orf150 30 4.8
7FTSB_XYLFT (Q87DY5) Cell division protein ftsB homolog 30 4.8

>AMAA_BACST (P37112) N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)|
           (L-aminoacylase)
          Length = 370

 Score = 33.1 bits (74), Expect = 0.73
 Identities = 21/53 (39%), Positives = 25/53 (47%)
 Frame = +3

Query: 423 GPSPRNRSRRAHGPLKSEASLVRFLRTSSQ*QSAAPWPRRASCRCRCRLPLQP 581
           G   R   RR  GPL++E    RFLR  ++        RR  CR R RLP  P
Sbjct: 313 GNGVRAVRRRGSGPLETEHGRRRFLRLFAKSARQLFLRRRGQCRKRHRLPAPP 365



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>GP175_RAT (Q791F6) Integral membrane protein GPR175 (Transmembrane domain|
           protein of 40 kDa regulated in adipocytes) (TPRA40)
          Length = 369

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +2

Query: 470 IRGFFGAIPPNFFSVTVCCPMAEASELPMPLPFAVAASHPVD 595
           +RGFFG+ P   FS       AE  ++ +P P+AVA    ++
Sbjct: 277 LRGFFGSEPKILFSYKCQVDEAEEPDMHLPQPYAVARREGIE 318



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>GP175_MOUSE (Q99MU1) Integral membrane protein GPR175 (Transmembrane domain|
           protein of 40 kDa regulated in adipocytes) (TPRA40)
          Length = 369

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +2

Query: 470 IRGFFGAIPPNFFSVTVCCPMAEASELPMPLPFAVAASHPVD 595
           +RGFFG+ P   FS       AE  ++ +P P+AVA    ++
Sbjct: 277 LRGFFGSEPKILFSYKCQVDEAEEPDMHLPQPYAVARREGIE 318



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>LYTS_STRMU (Q8DVB6) Sensor protein lytS (EC 2.7.13.3)|
          Length = 580

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
 Frame = -1

Query: 582 LAATANGNGIGNSLASAMGQQTVTEKKFGGIA-----PKKPLISKDHERAYFDSAD 430
           +A + NG GI  ++   +GQ+TV+E K  G A      +  L+     + +FDS D
Sbjct: 503 VAVSDNGQGISPNMIDKLGQETVSESKGTGTALVNLNNRLNLLYGSASQLHFDSTD 558



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>GP175_HUMAN (Q86W33) Integral membrane protein GPR175|
          Length = 373

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 470 IRGFFGAIPPNFFSVTVCCPMAEASELPMPLPFAVAASHPVDLSSA 607
           +RGFFG+ P   FS        E  ++ +P P+AVA    ++ + A
Sbjct: 280 LRGFFGSEPKILFSYKCQVDETEEPDVHLPQPYAVARREGLEAAGA 325



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>CF150_HUMAN (Q8N884) Protein C6orf150|
          Length = 522

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -3

Query: 421 RQASCKQQRAGCSNRVLEAKAKEDAPSPAPPSQAGLRVRLIDRDA 287
           R  SC+Q+ A CS +        D PSP  P  A + VR   RDA
Sbjct: 117 RAGSCRQRGARCSTKPRPPPGPWDVPSPGLPVSAPILVR---RDA 158



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>FTSB_XYLFT (Q87DY5) Cell division protein ftsB homolog|
          Length = 118

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 545 ELPMPLPFAVAASHPVDLSSAKRRKK 622
           ++P+PLP   +A H VDLS  +R K+
Sbjct: 93  DIPVPLPNDTSADHGVDLSQPRREKR 118


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,324,756
Number of Sequences: 219361
Number of extensions: 1264178
Number of successful extensions: 3662
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3651
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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