>DHRS3_MOUSE (O88876) Short-chain dehydrogenase/reductase 3 (EC 1.1.-.-)|
           (Retinal short-chain dehydrogenase/reductase 1)
           (retSDR1)
          Length = 302

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 150 FTGLNLRLEMAFPKLKPEAVSEYAVHADSEDPGML 254
           F G+ +R    FP LKPE V+   V A  ++  +L
Sbjct: 227 FQGMRVRFPNLFPPLKPETVARRTVDAVQQNQALL 261

>SPTN5_HUMAN (Q9NRC6) Spectrin beta chain, brain 4 (Spectrin, non-erythroid beta|
           chain 4) (Beta-V spectrin) (BSPECV)
          Length = 3674

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -2

Query: 246 RDLHCQRAPHI-LTRLLASVSGKPFPALGSNP*RIQIRENSKYAMMFL 106
           R+L+ + A  I L RLL  +SG+  P       R+   ENS  A+ FL
Sbjct: 78  RNLYTELADGIHLLRLLELISGEALPPPSRGRLRVHFLENSSRALAFL 125

>WNK4_RAT (Q7TPK6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)|
           (Protein kinase with no lysine 4) (Protein kinase,
           lysine-deficient 4)
          Length = 1222

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 259 PRSMPGSSLSACTAY-SDTASGFSFGKAISSLRFKPVK 149
           PRS PGS  S   +Y SD ASG S       +R  PVK
Sbjct: 625 PRSGPGSDFSPGDSYASDAASGLSDMGEGGQMRKNPVK 662

>WNK4_MOUSE (Q80UE6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)|
           (Protein kinase with no lysine 4) (Protein kinase,
           lysine-deficient 4)
          Length = 1222

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 259 PRSMPGSSLSACTAY-SDTASGFSFGKAISSLRFKPVK 149
           PRS PGS  S   +Y SD ASG S       +R  PVK
Sbjct: 625 PRSGPGSDFSPGDSYASDAASGLSDMGEGGQMRKNPVK 662

>DHRS3_HUMAN (O75911) Short-chain dehydrogenase/reductase 3 (EC 1.1.-.-)|
           (Retinal short-chain dehydrogenase/reductase 1)
           (retSDR1) (DD83.1)
          Length = 302

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 150 FTGLNLRLEMAFPKLKPEAVSEYAVHA 230
           F G+ +R    FP LKPE V+   V A
Sbjct: 227 FQGMRVRFPNLFPPLKPETVARRTVEA 253

>DHRS3_BOVIN (O77769) Short-chain dehydrogenase/reductase 3 (EC 1.1.-.-)|
           (Retinal short-chain dehydrogenase/reductase 1)
           (retSDR1)
          Length = 302

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 150 FTGLNLRLEMAFPKLKPEAVSEYAVHA 230
           F G+ +R    FP LKPE V+   V A
Sbjct: 227 FQGMRVRFPNLFPPLKPETVARRTVEA 253

>YPJI_ECOLI (P58095) Hypothetical protein ypjI|
          Length = 90

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 137 LIWILYGFEPKAGNGFPETEARSRVR 214
           ++W  + FEP AG GF     RS +R
Sbjct: 59  MVWRAWNFEPDAGEGFNRYIHRSGIR 84

>AP1M1_YEAST (Q00776) AP-1 complex subunit mu-1 (Mu(1)-adaptin) (Clathrin|
           assembly protein complex 1 medium chain) (Clathrin coat
           assembly protein AP54) (Clathrin coat-associated protein
           AP54) (Golgi adaptor AP-1 54 kDa protein) (HA1 54 kDa
           subunit)
          Length = 475

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 263 PEFVYSHPSLNYNSSTTLILWRCLS 337
           P F YSH SL Y    + ILW+  S
Sbjct: 362 PTFKYSHGSLKYVPEKSAILWKIRS 386


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,698,566
Number of Sequences: 219361
Number of extensions: 1034413
Number of successful extensions: 2237
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2237
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)