ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal34o18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ234421.1|HVU234421 Hordeum vulgare partial mRNA; clone cMW... 757 0.0
2gb|DQ427307.1| Sorghum bicolor voucher PI585454 locus CSU535 gen... 60 6e-06
3gb|DQ427306.1| Sorghum bicolor voucher PI267539 locus CSU535 gen... 60 6e-06
4gb|DQ427305.1| Sorghum bicolor voucher PI267408 locus CSU535 gen... 60 6e-06
5gb|DQ427304.1| Sorghum bicolor voucher PI221607 locus CSU535 gen... 60 6e-06
6gb|DQ427303.1| Sorghum bicolor voucher PI152702 locus CSU535 gen... 60 6e-06
7gb|DQ427302.1| Sorghum bicolor voucher NSL92371 locus CSU535 gen... 60 6e-06
8gb|DQ427301.1| Sorghum bicolor voucher NSL87902b locus CSU535 ge... 60 6e-06
9gb|DQ427300.1| Sorghum bicolor voucher NSL87902a locus CSU535 ge... 60 6e-06
10gb|DQ427299.1| Sorghum bicolor voucher NSL87666 locus CSU535 gen... 60 6e-06
11gb|DQ427298.1| Sorghum bicolor voucher NSL77217 locus CSU535 gen... 60 6e-06
12gb|DQ427297.1| Sorghum bicolor voucher NSL77034 locus CSU535 gen... 60 6e-06
13gb|DQ427296.1| Sorghum bicolor voucher NSL56174 locus CSU535 gen... 60 6e-06
14gb|DQ427295.1| Sorghum bicolor voucher NSL56003 locus CSU535 gen... 60 6e-06
15gb|DQ427294.1| Sorghum bicolor voucher NSL55243 locus CSU535 gen... 60 6e-06
16gb|DQ427293.1| Sorghum bicolor voucher NSL51365 locus CSU535 gen... 60 6e-06
17gb|DQ427292.1| Sorghum bicolor voucher NSL51030 locus CSU535 gen... 60 6e-06
18gb|DQ427291.1| Sorghum bicolor voucher NSL50875 locus CSU535 gen... 60 6e-06
19gb|DQ427290.1| Sorghum bicolor voucher BTx623 locus CSU535 genom... 60 6e-06
20ref|XM_471067.1| Oryza sativa (japonica cultivar-group), predic... 58 3e-05
21gb|BT016568.1| Zea mays clone Contig401 mRNA sequence 58 3e-05
22dbj|AK061898.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
23emb|AJ698084.1| Oryza sativa (japonica cultivar-group) mRNA for ... 58 3e-05
24dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
25dbj|AK065035.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
26emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4,... 58 3e-05
27gb|DQ427308.1| Sorghum propinquum locus CSU535 genomic sequence 48 0.024
28gb|AF051802.1|AF051802 Feline immunodeficiency virus isolate FIV... 42 1.5
29gb|AC123683.6| Mus musculus chromosome 9, clone RP23-296I6, comp... 40 5.9
30gb|AC101775.10| Mus musculus chromosome 19, clone RP24-116B5, co... 40 5.9
31gb|AC127350.3| Mus musculus BAC clone RP23-64P14 from chromosome... 40 5.9
32emb|AL359714.18| Human DNA sequence from clone RP11-22A15 on chr... 40 5.9
33gb|AC161506.4| Mus musculus chromosome 3, clone RP24-210J6, comp... 40 5.9
34gb|AC154399.5| Mus musculus chromosome 3, clone RP24-295P14, com... 40 5.9
35gb|AC079441.37| Mus musculus strain C57BL/6J clone rp23-349b16 m... 40 5.9
36ref|NM_064268.1| Caenorhabditis elegans Serpentine Receptor, cla... 40 5.9
37ref|NM_064267.1| Caenorhabditis elegans Serpentine Receptor, cla... 40 5.9
38gb|AY107844.1| Zea mays PCO146552 mRNA sequence 40 5.9
39emb|Z81124.1|CET21B4 Caenorhabditis elegans Cosmid T21B4, comple... 40 5.9
40emb|CT009715.15| Mouse DNA sequence from clone RP23-85E24 on chr... 40 5.9
41gb|AC141471.4| Mus musculus BAC clone RP24-326K11 from 18, compl... 40 5.9
42gb|AC107237.7| Mus musculus chromosome 3, clone RP23-475B9, comp... 40 5.9
43dbj|AP000829.4| Homo sapiens genomic DNA, chromosome 18p clone:R... 40 5.9 
>emb|AJ234421.1|HVU234421 Hordeum vulgare partial mRNA; clone cMWG0682
          Length = 577

 Score =  757 bits (382), Expect = 0.0
 Identities = 438/446 (98%), Gaps = 8/446 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   taatgatgatggttatgtct-agcatcca-caatc-aatcagtctcattat-accatggt 56
           |||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||||||
Sbjct: 530 taatgatgatggttatgtctcagcatccaacaatccaatcagtctcattatcaccatggt 471

                                                                       
Query: 57  tctatgtcctaat-agctctcagcttcacagactgcagctacagcagtatgtacacaagc 115
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tctatgtcctaatcagctctcagcttcacagactgcagctacagcagtatgtacacaagc 411

                                                                       
Query: 116 ctgcttacagatgctttctaccacgagcaaacctcgtccctatgtcctcatctgcaagcg 175
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ctgcttacagatgctttctaccacgagcaaacctcgtccctatgtcctcatctgcaagcg 351

                                                                       
Query: 176 cgagcgtctcaggaccaaagataataccggatagcgtcgctcggttgtgcatcangaatg 235
           |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 350 cgagcgtctcaggaccaa-gataataccggatagcgtcgctcggttgtgcatca-gaatg 293

                                                                       
Query: 236 aatgtgcatggcattgcggtgataggcgcggatgtttggttcc-tatcttcttcctggtc 294
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 292 aatgtgcatggcattgcggtgataggcgcggatgtttggttccctatcttcttcctggtc 233

                                                                       
Query: 295 ctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagccccttgtcgaagg 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 ctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagccccttgtcgaagg 173

                                                                       
Query: 355 tgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcccgtccagt 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 tgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcccgtccagt 113

                                     
Query: 415 gctttggcttctcggcttgggcgttg 440
           ||||||||||||||||||||||||||
Sbjct: 112 gctttggcttctcggcttgggcgttg 87
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>gb|DQ427307.1| Sorghum bicolor voucher PI585454 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427306.1| Sorghum bicolor voucher PI267539 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427305.1| Sorghum bicolor voucher PI267408 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427304.1| Sorghum bicolor voucher PI221607 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427303.1| Sorghum bicolor voucher PI152702 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427302.1| Sorghum bicolor voucher NSL92371 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427301.1| Sorghum bicolor voucher NSL87902b locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427300.1| Sorghum bicolor voucher NSL87902a locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427299.1| Sorghum bicolor voucher NSL87666 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427298.1| Sorghum bicolor voucher NSL77217 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427297.1| Sorghum bicolor voucher NSL77034 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427296.1| Sorghum bicolor voucher NSL56174 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427295.1| Sorghum bicolor voucher NSL56003 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427294.1| Sorghum bicolor voucher NSL55243 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427293.1| Sorghum bicolor voucher NSL51365 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427292.1| Sorghum bicolor voucher NSL51030 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427291.1| Sorghum bicolor voucher NSL50875 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>gb|DQ427290.1| Sorghum bicolor voucher BTx623 locus CSU535 genomic sequence
          Length = 689

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                       
Query: 287 tcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagcccctt 346
           |||||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   
Sbjct: 159 tcctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccacc 100

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||| ||||||||||||||||||||  | | |||||||| ||  || |||||||  |||  
Sbjct: 99  gtcaaaggtgcaagccagggcgacggcaccgcctatcatgagaaccttgggtatattgtt 40

                                 
Query: 407 cgtccagtgctttggcttctcg 428
            |||||||||||||||||||||
Sbjct: 39  tgtccagtgctttggcttctcg 18
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>ref|XM_471067.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1203

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 122/153 (79%)
 Strand = Plus / Minus

                                                                        
Query: 280  atcttcttcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagta 339
            |||| |||||||||||||||||||| || ||||| || || | ||||||||| || |  |
Sbjct: 1201 atctccttcctggtcctgcaaacctcctcgccgtaccaaatatgagagcctttgttaaca 1142

                                                                        
Query: 340  gccccttgtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggta 399
            | || | ||| || ||||| |||||||| ||  |||  ||||  | || |||||||||||
Sbjct: 1141 gtccatggtcaaacgtgcatgccagggcaactgcgccacctacaaggatgactttgggta 1082

                                             
Query: 400  ggttgcccgtccagtgctttggcttctcggctt 432
              ||||| |||||||||||||| ||||| ||||
Sbjct: 1081 tattgcctgtccagtgctttggtttctcagctt 1049
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>gb|BT016568.1| Zea mays clone Contig401 mRNA sequence
          Length = 845

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 347 gtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcc 406
           ||||||||||||||||||||||||  ||| | | |||| ||  || ||||||| ||||  
Sbjct: 159 gtcgaaggtgcaagccagggcgacggcgccgtcgatcatgagaaccttgggtatgttgtt 100

                                
Query: 407 cgtccagtgctttggcttctc 427
            ||||||||||||||||||||
Sbjct: 99  tgtccagtgctttggcttctc 79
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>dbj|AK061898.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-H01, full
            insert sequence
          Length = 1620

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 122/153 (79%)
 Strand = Plus / Minus

                                                                        
Query: 280  atcttcttcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagta 339
            |||| |||||||||||||||||||| || ||||| || || | ||||||||| || |  |
Sbjct: 1243 atctccttcctggtcctgcaaacctcctcgccgtaccaaatatgagagcctttgttaaca 1184

                                                                        
Query: 340  gccccttgtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggta 399
            | || | ||| || ||||| |||||||| ||  |||  ||||  | || |||||||||||
Sbjct: 1183 gtccatggtcaaacgtgcatgccagggcaactgcgccacctacaaggatgactttgggta 1124

                                             
Query: 400  ggttgcccgtccagtgctttggcttctcggctt 432
              ||||| |||||||||||||| ||||| ||||
Sbjct: 1123 tattgcctgtccagtgctttggtttctcagctt 1091
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>emb|AJ698084.1| Oryza sativa (japonica cultivar-group) mRNA for membrane related
            protein (mrp1 gene)
          Length = 1366

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 122/153 (79%)
 Strand = Plus / Minus

                                                                        
Query: 280  atcttcttcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagta 339
            |||| |||||||||||||||||||| || ||||| || || | ||||||||| || |  |
Sbjct: 1246 atctccttcctggtcctgcaaacctcctcgccgtaccaaatatgagagcctttgttaaca 1187

                                                                        
Query: 340  gccccttgtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggta 399
            | || | ||| || ||||| |||||||| ||  |||  ||||  | || |||||||||||
Sbjct: 1186 gtccatggtcaaacgtgcatgccagggcaactgcgccacctacaaggatgactttgggta 1127

                                             
Query: 400  ggttgcccgtccagtgctttggcttctcggctt 432
              ||||| |||||||||||||| ||||| ||||
Sbjct: 1126 tattgcctgtccagtgctttggtttctcagctt 1094
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 122/153 (79%)
 Strand = Plus / Plus

                                                                           
Query: 280     atcttcttcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagta 339
               |||| |||||||||||||||||||| || ||||| || || | ||||||||| || |  |
Sbjct: 1136356 atctccttcctggtcctgcaaacctcctcgccgtaccaaatatgagagcctttgttaaca 1136415

                                                                           
Query: 340     gccccttgtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggta 399
               | || | ||| || ||||| |||||||| ||  |||  ||||  | || |||||||||||
Sbjct: 1136416 gtccatggtcaaacgtgcatgccagggcaactgcgccacctacaaggatgactttgggta 1136475

                                                
Query: 400     ggttgcccgtccagtgctttggcttctcggctt 432
                 ||||| |||||||||||||| ||||| ||||
Sbjct: 1136476 tattgcctgtccagtgctttggtttctcagctt 1136508
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>dbj|AK065035.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H07, full
            insert sequence
          Length = 1869

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 122/153 (79%)
 Strand = Plus / Minus

                                                                        
Query: 280  atcttcttcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagta 339
            |||| |||||||||||||||||||| || ||||| || || | ||||||||| || |  |
Sbjct: 1488 atctccttcctggtcctgcaaacctcctcgccgtaccaaatatgagagcctttgttaaca 1429

                                                                        
Query: 340  gccccttgtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggta 399
            | || | ||| || ||||| |||||||| ||  |||  ||||  | || |||||||||||
Sbjct: 1428 gtccatggtcaaacgtgcatgccagggcaactgcgccacctacaaggatgactttgggta 1369

                                             
Query: 400  ggttgcccgtccagtgctttggcttctcggctt 432
              ||||| |||||||||||||| ||||| ||||
Sbjct: 1368 tattgcctgtccagtgctttggtttctcagctt 1336
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>emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020P07,
             complete sequence
          Length = 167895

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 122/153 (79%)
 Strand = Plus / Plus

                                                                         
Query: 280   atcttcttcctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagta 339
             |||| |||||||||||||||||||| || ||||| || || | ||||||||| || |  |
Sbjct: 78738 atctccttcctggtcctgcaaacctcctcgccgtaccaaatatgagagcctttgttaaca 78797

                                                                         
Query: 340   gccccttgtcgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggta 399
             | || | ||| || ||||| |||||||| ||  |||  ||||  | || |||||||||||
Sbjct: 78798 gtccatggtcaaacgtgcatgccagggcaactgcgccacctacaaggatgactttgggta 78857

                                              
Query: 400   ggttgcccgtccagtgctttggcttctcggctt 432
               ||||| |||||||||||||| ||||| ||||
Sbjct: 78858 tattgcctgtccagtgctttggtttctcagctt 78890
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>gb|DQ427308.1| Sorghum propinquum locus CSU535 genomic sequence
          Length = 696

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 111/140 (79%)
 Strand = Plus / Minus

                                                                       
Query: 289 ctggtcctgcaaaccttcttgccgttccgaacacgagagccttggtcagtagccccttgt 348
           |||| |||||||||||||| ||||| ||||| | ||  ||||||||||  |  ||   ||
Sbjct: 157 ctggccctgcaaaccttctcgccgtgccgaatatgacggccttggtcaacaatccaccgt 98

                                                                       
Query: 349 cgaaggtgcaagccagggcgaccacgctgcctatcacgaagactttgggtaggttgcccg 408
           | ||||||||||||||||||||  | |  ||||||| ||  || |||||||  |||   |
Sbjct: 97  caaaggtgcaagccagggcgacggcaccacctatcatgagaaccttgggtatattgtttg 38

                               
Query: 409 tccagtgctttggcttctcg 428
           ||||||||||||||||||||
Sbjct: 37  tccagtgctttggcttctcg 18
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>gb|AF051802.1|AF051802 Feline immunodeficiency virus isolate FIV-FcaWg1-2 pol polyprotein
           (pol) gene, partial cds
          Length = 476

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 279 tatcttcttcctggtcctgca 299
           |||||||||||||||||||||
Sbjct: 274 tatcttcttcctggtcctgca 254
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>gb|AC123683.6| Mus musculus chromosome 9, clone RP23-296I6, complete sequence
          Length = 189100

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    cacagactgcagctacagcagtat 105
             |||||||| |||||||||||||||
Sbjct: 71013 cacagactccagctacagcagtat 70990
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>gb|AC101775.10| Mus musculus chromosome 19, clone RP24-116B5, complete sequence
          Length = 167945

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ttacagatgctttctaccac 139
             ||||||||||||||||||||
Sbjct: 28399 ttacagatgctttctaccac 28418
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>gb|AC127350.3| Mus musculus BAC clone RP23-64P14 from chromosome 18, complete sequence
          Length = 190228

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    gtccagtgctttggcttctc 427
              ||||||||||||||||||||
Sbjct: 174406 gtccagtgctttggcttctc 174425
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>emb|AL359714.18| Human DNA sequence from clone RP11-22A15 on chromosome 6 Contains part of
              the BAI3 gene for brain-specific angiogenesis inhibitor 3,
              complete sequence
          Length = 156129

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    ctatgtcctcatctgcaagc 174
              ||||||||||||||||||||
Sbjct: 141096 ctatgtcctcatctgcaagc 141077
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>gb|AC161506.4| Mus musculus chromosome 3, clone RP24-210J6, complete sequence
          Length = 175241

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      tgatggttatgtctagcatc 26
              ||||||||||||||||||||
Sbjct: 115284 tgatggttatgtctagcatc 115303
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>gb|AC154399.5| Mus musculus chromosome 3, clone RP24-295P14, complete sequence
          Length = 165984

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    tgatggttatgtctagcatc 26
            ||||||||||||||||||||
Sbjct: 6635 tgatggttatgtctagcatc 6654
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>gb|AC079441.37| Mus musculus strain C57BL/6J clone rp23-349b16 map 17, complete sequence
          Length = 223005

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 75     tcagcttcacagactgcagctaca 98
              |||||||| |||||||||||||||
Sbjct: 126421 tcagcttcccagactgcagctaca 126398
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>ref|NM_064268.1| Caenorhabditis elegans Serpentine Receptor, class H family member
           (srh-67) (srh-67) mRNA, complete cds
          Length = 1026

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 gtcctgcaaaccttcttgcc 311
           ||||||||||||||||||||
Sbjct: 778 gtcctgcaaaccttcttgcc 797
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>ref|NM_064267.1| Caenorhabditis elegans Serpentine Receptor, class H family member
           (srh-68) (srh-68) mRNA, complete cds
          Length = 1026

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 gtcctgcaaaccttcttgcc 311
           ||||||||||||||||||||
Sbjct: 778 gtcctgcaaaccttcttgcc 797
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>gb|AY107844.1| Zea mays PCO146552 mRNA sequence
          Length = 823

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 323 gagagccttggtcagtagccccttgtcgaaggtgca 358
           ||||||||||||||| ||||||| ||| | ||||||
Sbjct: 456 gagagccttggtcaggagcccctggtcaagggtgca 421
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>emb|Z81124.1|CET21B4 Caenorhabditis elegans Cosmid T21B4, complete sequence
          Length = 37797

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   gtcctgcaaaccttcttgcc 311
             ||||||||||||||||||||
Sbjct: 19768 gtcctgcaaaccttcttgcc 19787



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   gtcctgcaaaccttcttgcc 311
             ||||||||||||||||||||
Sbjct: 18085 gtcctgcaaaccttcttgcc 18104
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>emb|CT009715.15| Mouse DNA sequence from clone RP23-85E24 on chromosome 17, complete
            sequence
          Length = 178948

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 75   tcagcttcacagactgcagctaca 98
            |||||||| |||||||||||||||
Sbjct: 6530 tcagcttcccagactgcagctaca 6507
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>gb|AC141471.4| Mus musculus BAC clone RP24-326K11 from 18, complete sequence
          Length = 216048

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 408  gtccagtgctttggcttctc 427
            ||||||||||||||||||||
Sbjct: 4039 gtccagtgctttggcttctc 4058
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>gb|AC107237.7| Mus musculus chromosome 3, clone RP23-475B9, complete sequence
          Length = 173716

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      tgatggttatgtctagcatc 26
              ||||||||||||||||||||
Sbjct: 139848 tgatggttatgtctagcatc 139829
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>dbj|AP000829.4| Homo sapiens genomic DNA, chromosome 18p clone:RP11-732L14, complete
              sequences
          Length = 186383

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    tcaggaccaaagataatacc 203
              ||||||||||||||||||||
Sbjct: 174496 tcaggaccaaagataatacc 174515


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,900,608
Number of Sequences: 3902068
Number of extensions: 2900608
Number of successful extensions: 49495
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49392
Number of HSP's gapped (non-prelim): 78
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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