ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal34o17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-) 48 6e-06
2RD21A_ARATH (P43297) Cysteine proteinase RD21a precursor (EC 3.4... 41 0.001
3CPGP1_ZINOF (P82473) Cysteine proteinase GP-I (EC 3.4.22.-) 36 0.025
4CYSP4_BRANA (P25251) Cysteine proteinase COT44 precursor (EC 3.4... 35 0.043
5CYSPL_LYCES (P20721) Low-temperature-induced cysteine proteinase... 35 0.043
6GCP1_ARATH (Q94B08) Germination-specific cysteine protease 1 pre... 33 0.16
7CYSP1_ORYSA (Q7XR52) Cysteine protease 1 precursor (EC 3.4.22.-)... 32 0.62
8ORYB_ORYSA (P25777) Oryzain beta chain precursor (EC 3.4.22.-) 32 0.62
9ERVB_TABDI (P60994) Ervatamin-B (EC 3.4.22.-) (ERV-B) 31 0.81
10BROM2_ANACO (P14518) Bromelain, stem (EC 3.4.22.32) 30 2.4
11CYSEP_PHAVU (P25803) Vignain precursor (EC 3.4.22.-) (Bean endop... 29 3.1
12CPR1_ARATH (Q9LT77) Probable cysteine proteinase At3g19400 precu... 29 3.1
13CYSP_HEMSP (P43156) Thiol protease SEN102 precursor (EC 3.4.22.-) 29 4.0
14NOEL_RHIFR (O85713) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (G... 28 5.3
15CYSEP_RICCO (O65039) Vignain precursor (EC 3.4.22.-) (Cysteine e... 28 9.0

>ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-)|
          Length = 458

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 26/52 (50%), Positives = 28/52 (53%)
 Frame = -3

Query: 157 MERNIKASSGKCGIAVEPSYXXXXXXXXXXXXXXXXXXXXXXSVCDSYNECP 2
           MERNIKASSGKCGIAVEPSY                      +VCD+Y  CP
Sbjct: 323 MERNIKASSGKCGIAVEPSYPLKKGENPPNPGPTPPSPTPPPTVCDNYYTCP 374



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>RD21A_ARATH (P43297) Cysteine proteinase RD21a precursor (EC 3.4.22.-) (RD21)|
          Length = 462

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 22/52 (42%), Positives = 25/52 (48%)
 Frame = -3

Query: 157 MERNIKASSGKCGIAVEPSYXXXXXXXXXXXXXXXXXXXXXXSVCDSYNECP 2
           M RNI +SSGKCGIA+EPSY                      + CDSY  CP
Sbjct: 331 MARNIASSSGKCGIAIEPSYPIKNGENPPNPGPSPPSPIKPPTQCDSYYTCP 382



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>CPGP1_ZINOF (P82473) Cysteine proteinase GP-I (EC 3.4.22.-)|
          Length = 221

 Score = 36.2 bits (82), Expect = 0.025
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = -3

Query: 157 MERNIKASSGKCGIAVEPSY 98
           +ERNI  SSGKCGIA+ PSY
Sbjct: 195 VERNIAESSGKCGIAISPSY 214



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>CYSP4_BRANA (P25251) Cysteine proteinase COT44 precursor (EC 3.4.22.-)|
           (Fragment)
          Length = 328

 Score = 35.4 bits (80), Expect = 0.043
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = -3

Query: 157 MERNIKASSGKCGIAVEPSY 98
           MERN+ + SGKCGIA+E SY
Sbjct: 294 MERNVASKSGKCGIAIEASY 313



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>CYSPL_LYCES (P20721) Low-temperature-induced cysteine proteinase precursor (EC|
           3.4.22.-) (Fragment)
          Length = 346

 Score = 35.4 bits (80), Expect = 0.043
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -3

Query: 157 MERNIKASSGKCGIAVEPSYXXXXXXXXXXXXXXXXXXXXXXSVCDSYNEC 5
           ++RN+ +SSG CG+A+EPSY                      + CD Y++C
Sbjct: 212 VQRNVSSSSGLCGLAIEPSYPVKTGPNPPKPAPSPPSPVKPPTECDEYSQC 262



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>GCP1_ARATH (Q94B08) Germination-specific cysteine protease 1 precursor (EC|
           3.4.22.-)
          Length = 376

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 17/21 (80%), Positives = 18/21 (85%), Gaps = 1/21 (4%)
 Frame = -3

Query: 157 MERNIKAS-SGKCGIAVEPSY 98
           MERN+ AS SGKCGIAVE SY
Sbjct: 339 MERNLAASKSGKCGIAVEASY 359



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>CYSP1_ORYSA (Q7XR52) Cysteine protease 1 precursor (EC 3.4.22.-) (OsCP1)|
          Length = 490

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -3

Query: 157 MERNIKASSGKCGIAVEPSY 98
           MERN+ A +GKCGIA+  SY
Sbjct: 353 MERNVTARTGKCGIAMMASY 372



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>ORYB_ORYSA (P25777) Oryzain beta chain precursor (EC 3.4.22.-)|
          Length = 471

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -3

Query: 157 MERNIKASSGKCGIAVEPSY 98
           MERNI  ++GKCGIA+  SY
Sbjct: 335 MERNINVTTGKCGIAMMASY 354



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>ERVB_TABDI (P60994) Ervatamin-B (EC 3.4.22.-) (ERV-B)|
          Length = 215

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = -3

Query: 157 MERNIKASSGKCGIAVEPSY 98
           MERN+ +S+G CGIA  PSY
Sbjct: 192 MERNVASSAGLCGIAQLPSY 211



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>BROM2_ANACO (P14518) Bromelain, stem (EC 3.4.22.32)|
          Length = 212

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 157 MERNIKASSGKCGIAVEPSY 98
           M R++ +SSG CGIA++P Y
Sbjct: 188 MARDVSSSSGICGIAIDPLY 207



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>CYSEP_PHAVU (P25803) Vignain precursor (EC 3.4.22.-) (Bean endopeptidase)|
           (Cysteine proteinase EP-C1)
          Length = 362

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 157 MERNIKASSGKCGIAVEPSY 98
           M+RNI    G CGIA+ PSY
Sbjct: 323 MQRNISKKEGLCGIAMLPSY 342



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>CPR1_ARATH (Q9LT77) Probable cysteine proteinase At3g19400 precursor (EC|
           3.4.22.-)
          Length = 362

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -3

Query: 157 MERNIKASSGKCGIAVEPSY 98
           ++RNI    GKCGIA+ PSY
Sbjct: 327 LQRNIDDPFGKCGIAMMPSY 346



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>CYSP_HEMSP (P43156) Thiol protease SEN102 precursor (EC 3.4.22.-)|
          Length = 360

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 157 MERNIKASSGKCGIAVEPSY 98
           M+R I    GKCGIA+E SY
Sbjct: 324 MQRGISDKRGKCGIAMEASY 343



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>NOEL_RHIFR (O85713) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose|
           dehydratase)
          Length = 351

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -3

Query: 154 ERNIKASSGKCGIAVEPSY 98
           ER I A++GKC +AV+P Y
Sbjct: 285 ERGIDAATGKCVVAVDPRY 303



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>CYSEP_RICCO (O65039) Vignain precursor (EC 3.4.22.-) (Cysteine endopeptidase)|
          Length = 360

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -3

Query: 157 MERNIKASSGKCGIAVEPSY 98
           MER I    G CGIA+E SY
Sbjct: 321 MERGISDKEGLCGIAMEASY 340


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,623,716
Number of Sequences: 219361
Number of extensions: 99730
Number of successful extensions: 178
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 80,573,946
effective HSP length: 28
effective length of database: 74,431,838
effective search space used: 1786364112
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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