ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal34o17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474131.1| Oryza sativa (japonica cultivar-group), predic... 84 1e-13
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 84 1e-13
3dbj|AK098910.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 1e-13
4dbj|AK071913.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 1e-13
5dbj|AK061729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 1e-13
6emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 84 1e-13
7dbj|D90406.1|RICOZA Oryza sativa (japonica cultivar-group) mRNA ... 84 1e-13
8emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4,... 84 1e-13
9gb|AF019147.1|AF019147 Zea mays cysteine proteinase Mir3 (mir3) ... 50 0.002
10dbj|AB020961.1| Zea mays mRNA for cysteine protease component of... 50 0.002
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.12
12dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.12
13dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.12
14gb|AY106278.1| Zea mays PCO137999 mRNA sequence 42 0.49
15ref|XM_608030.2| PREDICTED: Bos taurus aminopeptidase N, transcr... 40 1.9
16ref|XM_875495.1| PREDICTED: Bos taurus aminopeptidase N, transcr... 40 1.9
17ref|XM_875424.1| PREDICTED: Bos taurus aminopeptidase N, transcr... 40 1.9
18ref|XM_865178.1| PREDICTED: Bos taurus aminopeptidase N, transcr... 40 1.9
19gb|BC024012.1| Homo sapiens monocyte to macrophage differentiati... 40 1.9
20gb|AC053546.8| Homo sapiens BAC clone RP11-805D5 from 7, complet... 40 1.9
21emb|AL929269.16| Human DNA sequence from clone RP11-658E23 on ch... 40 1.9
22ref|XM_791539.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 1.9
23gb|AC079313.35| Homo sapiens 12q BAC RP11-753H16 (Roswell Park C... 40 1.9
24ref|XM_781911.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 1.9
25gb|BC105142.1| Bos taurus cDNA clone MGC:126949 IMAGE:7929135, c... 40 1.9
26emb|AJ339394.1|HSA339394 Homo sapiens genomic sequence surroundi... 40 1.9
27emb|AJ342112.1|HSA342112 Homo sapiens genomic sequence surroundi... 40 1.9
28emb|AJ340172.1|HSA340172 Homo sapiens genomic sequence surroundi... 40 1.9
29emb|AJ339912.1|HSA339912 Homo sapiens genomic sequence surroundi... 40 1.9
30emb|BX511137.14| Zebrafish DNA sequence from clone DKEY-192A11 i... 38 7.7
31emb|AL356378.17| Human DNA sequence from clone RP11-337C18 on ch... 38 7.7
32emb|AL137182.9| Human DNA sequence from clone RP1-257A15 on chro... 38 7.7
33gb|AC010260.7| Homo sapiens chromosome 5 clone CTC-458I2, comple... 38 7.7
34gb|AC008382.6| Homo sapiens chromosome 5 clone CTC-218P2, comple... 38 7.7
35gb|AF129332.1|AF129332 Homo sapiens MUM2 (MUM2) gene, complete cds 38 7.7
36gb|AC008199.4|AC008199 Drosophila melanogaster, chromosome 3R, r... 38 7.7
37gb|AC012499.8| Homo sapiens BAC clone RP11-428I14 from 2, comple... 38 7.7
38gb|AC079250.7| Homo sapiens BAC clone RP11-62I18 from 2, complet... 38 7.7
39dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 38 7.7
40emb|CT030223.5| Zebrafish DNA sequence from clone CH73-52I22 in ... 38 7.7
41gb|AE003741.2| Drosophila melanogaster chromosome 3R, section 79... 38 7.7 
>ref|XM_474131.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1377

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 93/110 (84%)
 Strand = Plus / Minus

                                                                        
Query: 48   gacggtggagttgggccggggttaggggggttctcgcccgtcttcgtcgggtaggaaggc 107
            ||||| ||||| ||||||||||| ||||||||||||||| |||||   |||||||| |||
Sbjct: 1076 gacggcggagtagggccggggttcggggggttctcgcccttcttcagagggtaggatggc 1017

                                                              
Query: 108  tcgacagcaataccacatttgccactggatgccttgatgttacgctccat 157
            || || ||||| || || |||||||||   ||||||||||| ||||||||
Sbjct: 1016 tcaacggcaatgccgcacttgccactgctcgccttgatgttgcgctccat 967
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 93/110 (84%)
 Strand = Plus / Plus

                                                                            
Query: 48       gacggtggagttgggccggggttaggggggttctcgcccgtcttcgtcgggtaggaaggc 107
                ||||| ||||| ||||||||||| ||||||||||||||| |||||   |||||||| |||
Sbjct: 33157954 gacggcggagtagggccggggttcggggggttctcgcccttcttcagagggtaggatggc 33158013

                                                                  
Query: 108      tcgacagcaataccacatttgccactggatgccttgatgttacgctccat 157
                || || ||||| || || |||||||||   ||||||||||| ||||||||
Sbjct: 33158014 tcaacggcaatgccgcacttgccactgctcgccttgatgttgcgctccat 33158063
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>dbj|AK098910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H09, full
            insert sequence
          Length = 1753

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 93/110 (84%)
 Strand = Plus / Minus

                                                                        
Query: 48   gacggtggagttgggccggggttaggggggttctcgcccgtcttcgtcgggtaggaaggc 107
            ||||| ||||| ||||||||||| ||||||||||||||| |||||   |||||||| |||
Sbjct: 1141 gacggcggagtagggccggggttcggggggttctcgcccttcttcagagggtaggatggc 1082

                                                              
Query: 108  tcgacagcaataccacatttgccactggatgccttgatgttacgctccat 157
            || || ||||| || || |||||||||   ||||||||||| ||||||||
Sbjct: 1081 tcaacggcaatgccgcacttgccactgctcgccttgatgttgcgctccat 1032
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>dbj|AK071913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065M08, full
            insert sequence
          Length = 1774

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 93/110 (84%)
 Strand = Plus / Minus

                                                                        
Query: 48   gacggtggagttgggccggggttaggggggttctcgcccgtcttcgtcgggtaggaaggc 107
            ||||| ||||| ||||||||||| ||||||||||||||| |||||   |||||||| |||
Sbjct: 1141 gacggcggagtagggccggggttcggggggttctcgcccttcttcagagggtaggatggc 1082

                                                              
Query: 108  tcgacagcaataccacatttgccactggatgccttgatgttacgctccat 157
            || || ||||| || || |||||||||   ||||||||||| ||||||||
Sbjct: 1081 tcaacggcaatgccgcacttgccactgctcgccttgatgttgcgctccat 1032
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>dbj|AK061729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-B12, full
           insert sequence
          Length = 976

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 93/110 (84%)
 Strand = Plus / Minus

                                                                       
Query: 48  gacggtggagttgggccggggttaggggggttctcgcccgtcttcgtcgggtaggaaggc 107
           ||||| ||||| ||||||||||| ||||||||||||||| |||||   |||||||| |||
Sbjct: 343 gacggcggagtagggccggggttcggggggttctcgcccttcttcagagggtaggatggc 284

                                                             
Query: 108 tcgacagcaataccacatttgccactggatgccttgatgttacgctccat 157
           || || ||||| || || |||||||||   ||||||||||| ||||||||
Sbjct: 283 tcaacggcaatgccgcacttgccactgctcgccttgatgttgcgctccat 234
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>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete
             sequence
          Length = 118971

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 93/110 (84%)
 Strand = Plus / Plus

                                                                         
Query: 48    gacggtggagttgggccggggttaggggggttctcgcccgtcttcgtcgggtaggaaggc 107
             ||||| ||||| ||||||||||| ||||||||||||||| |||||   |||||||| |||
Sbjct: 48347 gacggcggagtagggccggggttcggggggttctcgcccttcttcagagggtaggatggc 48406

                                                               
Query: 108   tcgacagcaataccacatttgccactggatgccttgatgttacgctccat 157
             || || ||||| || || |||||||||   ||||||||||| ||||||||
Sbjct: 48407 tcaacggcaatgccgcacttgccactgctcgccttgatgttgcgctccat 48456
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>dbj|D90406.1|RICOZA Oryza sativa (japonica cultivar-group) mRNA for oryzain alpha,
            complete cds
          Length = 1929

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 93/110 (84%)
 Strand = Plus / Minus

                                                                        
Query: 48   gacggtggagttgggccggggttaggggggttctcgcccgtcttcgtcgggtaggaaggc 107
            ||||| ||||| ||||||||||| ||||||||||||||| |||||   |||||||| |||
Sbjct: 1121 gacggcggagtagggccggggttcggggggttctcgcccttcttcagagggtaggatggc 1062

                                                              
Query: 108  tcgacagcaataccacatttgccactggatgccttgatgttacgctccat 157
            || || ||||| || || |||||||||   ||||||||||| ||||||||
Sbjct: 1061 tcaacggcaatgccgcacttgccactgctcgccttgatgttgcgctccat 1012
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>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02,
             complete sequence
          Length = 165745

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 93/110 (84%)
 Strand = Plus / Plus

                                                                         
Query: 48    gacggtggagttgggccggggttaggggggttctcgcccgtcttcgtcgggtaggaaggc 107
             ||||| ||||| ||||||||||| ||||||||||||||| |||||   |||||||| |||
Sbjct: 40604 gacggcggagtagggccggggttcggggggttctcgcccttcttcagagggtaggatggc 40663

                                                               
Query: 108   tcgacagcaataccacatttgccactggatgccttgatgttacgctccat 157
             || || ||||| || || |||||||||   ||||||||||| ||||||||
Sbjct: 40664 tcaacggcaatgccgcacttgccactgctcgccttgatgttgcgctccat 40713
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>gb|AF019147.1|AF019147 Zea mays cysteine proteinase Mir3 (mir3) mRNA, complete cds
          Length = 1830

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 95   cgggtaggaaggctcgacagcaataccacatttgccactggatgccttgatgttacgctc 154
            |||||| || ||||| || || ||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 1148 cgggtatgacggctcaaccgcgataccgcacttgccgctggacgccttgatgttgcgctc 1089

                 
Query: 155  catcc 159
            |||||
Sbjct: 1088 catcc 1084
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>dbj|AB020961.1| Zea mays mRNA for cysteine protease component of protease-inhibitor
            complex, complete cds
          Length = 1828

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 95   cgggtaggaaggctcgacagcaataccacatttgccactggatgccttgatgttacgctc 154
            |||||| || ||||| || || ||||| || ||||| ||||| ||||||||||| |||||
Sbjct: 1147 cgggtatgacggctcaaccgcgataccgcacttgccgctggacgccttgatgttgcgctc 1088

                 
Query: 155  catcc 159
            |||||
Sbjct: 1087 catcc 1083
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 45       ggagacggtggagttgggccgg 66
                ||||||||||||||||||||||
Sbjct: 16228174 ggagacggtggagttgggccgg 16228153
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>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1344_B01
          Length = 170912

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 45    ggagacggtggagttgggccgg 66
             ||||||||||||||||||||||
Sbjct: 44690 ggagacggtggagttgggccgg 44669
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>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0556H01
          Length = 149800

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 45     ggagacggtggagttgggccgg 66
              ||||||||||||||||||||||
Sbjct: 132775 ggagacggtggagttgggccgg 132754
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>gb|AY106278.1| Zea mays PCO137999 mRNA sequence
          Length = 1382

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 75  gggttctcgcccgtcttcgtcgggtagga 103
           |||||| ||||| ||||||||||||||||
Sbjct: 857 gggttcgcgcccttcttcgtcgggtagga 829
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>ref|XM_608030.2| PREDICTED: Bos taurus aminopeptidase N, transcript variant 1 (APN),
            mRNA
          Length = 2610

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 39   ggggcgggagacggtggagttggg 62
            |||||||| |||||||||||||||
Sbjct: 1803 ggggcgggtgacggtggagttggg 1780
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>ref|XM_875495.1| PREDICTED: Bos taurus aminopeptidase N, transcript variant 4 (APN),
            mRNA
          Length = 3504

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 39   ggggcgggagacggtggagttggg 62
            |||||||| |||||||||||||||
Sbjct: 1878 ggggcgggtgacggtggagttggg 1855
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>ref|XM_875424.1| PREDICTED: Bos taurus aminopeptidase N, transcript variant 3 (APN),
            mRNA
          Length = 3495

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 39   ggggcgggagacggtggagttggg 62
            |||||||| |||||||||||||||
Sbjct: 1869 ggggcgggtgacggtggagttggg 1846
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>ref|XM_865178.1| PREDICTED: Bos taurus aminopeptidase N, transcript variant 2 (APN),
            mRNA
          Length = 3495

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 39   ggggcgggagacggtggagttggg 62
            |||||||| |||||||||||||||
Sbjct: 1869 ggggcgggtgacggtggagttggg 1846
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>gb|BC024012.1| Homo sapiens monocyte to macrophage differentiation-associated 2,
            mRNA (cDNA clone IMAGE:4821102), with apparent retained
            intron
          Length = 3764

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 58   ttgggccggggttagggggg 77
            ||||||||||||||||||||
Sbjct: 1847 ttgggccggggttagggggg 1866
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>gb|AC053546.8| Homo sapiens BAC clone RP11-805D5 from 7, complete sequence
          Length = 24238

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 58   ttgggccggggttagggggg 77
            ||||||||||||||||||||
Sbjct: 5744 ttgggccggggttagggggg 5725
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>emb|AL929269.16| Human DNA sequence from clone RP11-658E23 on chromosome 1, complete
             sequence
          Length = 20614

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    tggagttgggccggggttaggggg 76
             ||||||||||| ||||||||||||
Sbjct: 15113 tggagttgggctggggttaggggg 15090
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>ref|XM_791539.1| PREDICTED: Strongylocentrotus purpuratus similar to sacsin
           (LOC591996), partial mRNA
          Length = 1273

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 46  gagacggtggagttgggccg 65
           ||||||||||||||||||||
Sbjct: 481 gagacggtggagttgggccg 462
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>gb|AC079313.35| Homo sapiens 12q BAC RP11-753H16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 160232

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    ggaagacggtggggcgggagacgg 52
             |||||||| |||||||||||||||
Sbjct: 23023 ggaagacgctggggcgggagacgg 23046
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>ref|XM_781911.1| PREDICTED: Strongylocentrotus purpuratus similar to sacsin
          (LOC581934), mRNA
          Length = 2007

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 46 gagacggtggagttgggccg 65
          ||||||||||||||||||||
Sbjct: 40 gagacggtggagttgggccg 21
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>gb|BC105142.1| Bos taurus cDNA clone MGC:126949 IMAGE:7929135, complete cds
          Length = 3412

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 39   ggggcgggagacggtggagttggg 62
            |||||||| |||||||||||||||
Sbjct: 1768 ggggcgggtgacggtggagttggg 1745
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>emb|AJ339394.1|HSA339394 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-FF21C
          Length = 640

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 29  ggaagacggtggggcgggagacgg 52
           |||||||| |||||||||||||||
Sbjct: 294 ggaagacgctggggcgggagacgg 271
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>emb|AJ342112.1|HSA342112 Homo sapiens genomic sequence surrounding NotI site, clone
           NL4-CL21C
          Length = 722

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 29  ggaagacggtggggcgggagacgg 52
           |||||||| |||||||||||||||
Sbjct: 294 ggaagacgctggggcgggagacgg 271
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>emb|AJ340172.1|HSA340172 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-GG20C
          Length = 722

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 29  ggaagacggtggggcgggagacgg 52
           |||||||| |||||||||||||||
Sbjct: 294 ggaagacgctggggcgggagacgg 271
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>emb|AJ339912.1|HSA339912 Homo sapiens genomic sequence surrounding NotI site, clone NR5-FG5C
          Length = 844

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 29  ggaagacggtggggcgggagacgg 52
           |||||||| |||||||||||||||
Sbjct: 294 ggaagacgctggggcgggagacgg 271
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>emb|BX511137.14| Zebrafish DNA sequence from clone DKEY-192A11 in linkage group 7,
              complete sequence
          Length = 214145

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 119    accacatttgccactggat 137
              |||||||||||||||||||
Sbjct: 157234 accacatttgccactggat 157252
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>emb|AL356378.17| Human DNA sequence from clone RP11-337C18 on chromosome 1 Contains the
              PRKAB2 gene for protein kinase, AMP-activated, beta 2
              non-catalytic subunit protein, a FMO5 gene for the flavin
              containing monooxygenase 5 protein, the CHD1L gene for
              chromodomain helicase DNA binding protein 1-like (FLJ22530)
              protein, a processed pseudogene similar to glucose
              regulated protein, 58kDa (GRP58), a processed pseudogene
              similar to chaperonin containing TCP1, subunit 8 (theta)
              (CCT8) protein, a processed pseudogene similar to ribosomal
              protein L7a (RPL7A) protein, a processed pseudogene similar
              to leukotriene B4 12-hydroxydehydrogenase (LTB4DH) protein
              and three CpG islands, complete sequence
          Length = 202955

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      gggcactcgttgtagctgt 21
              |||||||||||||||||||
Sbjct: 120281 gggcactcgttgtagctgt 120299
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>emb|AL137182.9| Human DNA sequence from clone RP1-257A15 on chromosome 6 Contains part
             of a novel gene, part of the gene for a novel protein
             (FLJ32724) and a CpG island, complete sequence
          Length = 120988

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 117   ataccacatttgccactgg 135
             |||||||||||||||||||
Sbjct: 82539 ataccacatttgccactgg 82521
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>gb|AC010260.7| Homo sapiens chromosome 5 clone CTC-458I2, complete sequence
          Length = 150528

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 111    acagcaataccacatttgc 129
              |||||||||||||||||||
Sbjct: 102450 acagcaataccacatttgc 102432
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>gb|AC008382.6| Homo sapiens chromosome 5 clone CTC-218P2, complete sequence
          Length = 252015

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 111    acagcaataccacatttgc 129
              |||||||||||||||||||
Sbjct: 247586 acagcaataccacatttgc 247604
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>gb|AF129332.1|AF129332 Homo sapiens MUM2 (MUM2) gene, complete cds
          Length = 2750

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 69  ttaggggggttctcgcccg 87
           |||||||||||||||||||
Sbjct: 693 ttaggggggttctcgcccg 675
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>gb|AC008199.4|AC008199 Drosophila melanogaster, chromosome 3R, region 94D-94D, BAC clone
              BACR01K08, complete sequence
          Length = 177127

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      cagggcactcgttgtagct 19
              |||||||||||||||||||
Sbjct: 119039 cagggcactcgttgtagct 119021
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>gb|AC012499.8| Homo sapiens BAC clone RP11-428I14 from 2, complete sequence
          Length = 183436

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 116   aataccacatttgccactg 134
             |||||||||||||||||||
Sbjct: 73020 aataccacatttgccactg 73038
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>gb|AC079250.7| Homo sapiens BAC clone RP11-62I18 from 2, complete sequence
          Length = 82938

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 44    gggagacggtggagttggg 62
             |||||||||||||||||||
Sbjct: 46833 gggagacggtggagttggg 46815
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>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 52     gtggagttgggccggggttaggg 74
              |||||||||||||| ||||||||
Sbjct: 108553 gtggagttgggccgtggttaggg 108531
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>emb|CT030223.5| Zebrafish DNA sequence from clone CH73-52I22 in linkage group 7,
            complete sequence
          Length = 41778

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 119  accacatttgccactggat 137
            |||||||||||||||||||
Sbjct: 6336 accacatttgccactggat 6354
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>gb|AE003741.2| Drosophila melanogaster chromosome 3R, section 79 of 118 of the complete
              sequence
          Length = 233356

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      cagggcactcgttgtagct 19
              |||||||||||||||||||
Sbjct: 146937 cagggcactcgttgtagct 146919


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 754,143
Number of Sequences: 3902068
Number of extensions: 754143
Number of successful extensions: 50326
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50196
Number of HSP's gapped (non-prelim): 130
length of query: 159
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 137
effective length of database: 17,147,199,772
effective search space: 2349166368764
effective search space used: 2349166368764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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