>gb|AY105458.1| Zea mays PCO144592 mRNA sequence
          Length = 658

 Score =  228 bits (115), Expect = 1e-56
 Identities = 184/207 (88%)
 Strand = Plus / Minus

                                                                       
Query: 320 agggattctgatttgtgatcactaccagtagtcacagtataaccagctccaacctggcaa 379
           |||||||||| |||||| || || |||| ||||||| |||||||||||||||||||||||
Sbjct: 570 agggattctgctttgtgctcgctgccagcagtcacaatataaccagctccaacctggcaa 511

                                                                       
Query: 380 tctttcagaacggcacgctcttgaagttgcacattattacatacaacagaaccttggatg 439
           ||||||||||| || || ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 510 tctttcagaactgcccgttcttgcagttgaacattattacatacaacagaaccttggatg 451

                                                                       
Query: 440 tgacagccatcttcaataaccacatggttcatgacaacagagttgacaatcttcacattc 499
           || || |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||| 
Sbjct: 450 tggcaaccatcttcaataacaacatgattcatcacaacagagttgacgatctttacattg 391

                                      
Query: 500 gaaccgatacgacaatgacggccaatc 526
           ||||| || || |||||||| ||||||
Sbjct: 390 gaaccaattcggcaatgacgaccaatc 364

>gb|BT024114.1| Zea mays clone EL01N0510E09 mRNA sequence
          Length = 1797

 Score =  220 bits (111), Expect = 4e-54
 Identities = 183/207 (88%)
 Strand = Plus / Minus

                                                                        
Query: 320  agggattctgatttgtgatcactaccagtagtcacagtataaccagctccaacctggcaa 379
            |||||||||| |||||| || || |||| || |||| |||||||||||||||||||||||
Sbjct: 1463 agggattctgctttgtgctcgctgccagcaggcacaatataaccagctccaacctggcaa 1404

                                                                        
Query: 380  tctttcagaacggcacgctcttgaagttgcacattattacatacaacagaaccttggatg 439
            ||||||||||| || || ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 1403 tctttcagaactgcccgttcttgcagttgaacattattacatacaacagaaccttggatg 1344

                                                                        
Query: 440  tgacagccatcttcaataaccacatggttcatgacaacagagttgacaatcttcacattc 499
            || || |||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||| 
Sbjct: 1343 tggcaaccatcttcaataacaacatgattcatcacaacagagttgacgatctttacattg 1284

                                       
Query: 500  gaaccgatacgacaatgacggccaatc 526
            ||||| || || |||||||| ||||||
Sbjct: 1283 gaaccaattcggcaatgacgaccaatc 1257

>dbj|AK100837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123E15, full
            insert sequence
          Length = 1812

 Score =  212 bits (107), Expect = 9e-52
 Identities = 179/203 (88%)
 Strand = Plus / Minus

                                                                        
Query: 323  gattctgatttgtgatcactaccagtagtcacagtataaccagctccaacctggcaatct 382
            ||||||| |||||| ||||| | || ||| ||| |||||||||| |||||||| ||||||
Sbjct: 1421 gattctgctttgtgttcactgctagcagttacaatataaccagcaccaacctgacaatct 1362

                                                                        
Query: 383  ttcagaacggcacgctcttgaagttgcacattattacatacaacagaaccttggatgtga 442
            |||| ||| ||||| |||||||||||||||||||| ||||  ||||||||||| ||||||
Sbjct: 1361 ttcaaaacagcacgttcttgaagttgcacattattgcatatcacagaaccttgtatgtga 1302

                                                                        
Query: 443  cagccatcttcaataaccacatggttcatgacaacagagttgacaatcttcacattcgaa 502
            || |||||||||||||||||||||||||| || ||||| ||||||||||| ||||| |||
Sbjct: 1301 caaccatcttcaataaccacatggttcatcacgacagaattgacaatctttacatttgaa 1242

                                   
Query: 503  ccgatacgacaatgacggccaat 525
            || || |||||||||||||||||
Sbjct: 1241 ccaattcgacaatgacggccaat 1219

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  145 bits (73), Expect = 2e-31
 Identities = 109/121 (90%)
 Strand = Plus / Plus

                                                                            
Query: 371      acctggcaatctttcagaacggcacgctcttgaagttgcacattattacatacaacagaa 430
                ||||| |||||||||| ||| ||||| |||||||||||||||||||| ||||  ||||||
Sbjct: 13358184 acctgacaatctttcaaaacagcacgttcttgaagttgcacattattgcatatcacagaa 13358243

                                                                            
Query: 431      ccttggatgtgacagccatcttcaataaccacatggttcatgacaacagagttgacaatc 490
                ||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 13358244 ccttgtatgtgacaaccatcttcaataaccacatggttcatcacgacagaattgacaatc 13358303

                 
Query: 491      t 491
                |
Sbjct: 13358304 t 13358304



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 494      acattcgaaccgatacgacaatgacggccaat 525
                ||||| ||||| || |||||||||||||||||
Sbjct: 13358541 acatttgaaccaattcgacaatgacggccaat 13358572

>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0427E01
          Length = 146395

 Score =  145 bits (73), Expect = 2e-31
 Identities = 109/121 (90%)
 Strand = Plus / Plus

                                                                          
Query: 371    acctggcaatctttcagaacggcacgctcttgaagttgcacattattacatacaacagaa 430
              ||||| |||||||||| ||| ||||| |||||||||||||||||||| ||||  ||||||
Sbjct: 119994 acctgacaatctttcaaaacagcacgttcttgaagttgcacattattgcatatcacagaa 120053

                                                                          
Query: 431    ccttggatgtgacagccatcttcaataaccacatggttcatgacaacagagttgacaatc 490
              ||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 120054 ccttgtatgtgacaaccatcttcaataaccacatggttcatcacgacagaattgacaatc 120113

               
Query: 491    t 491
              |
Sbjct: 120114 t 120114



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 494    acattcgaaccgatacgacaatgacggccaat 525
              ||||| ||||| || |||||||||||||||||
Sbjct: 120351 acatttgaaccaattcgacaatgacggccaat 120382

>dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1294_G12
          Length = 121979

 Score =  145 bits (73), Expect = 2e-31
 Identities = 109/121 (90%)
 Strand = Plus / Plus

                                                                         
Query: 371   acctggcaatctttcagaacggcacgctcttgaagttgcacattattacatacaacagaa 430
             ||||| |||||||||| ||| ||||| |||||||||||||||||||| ||||  ||||||
Sbjct: 19616 acctgacaatctttcaaaacagcacgttcttgaagttgcacattattgcatatcacagaa 19675

                                                                         
Query: 431   ccttggatgtgacagccatcttcaataaccacatggttcatgacaacagagttgacaatc 490
             ||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 19676 ccttgtatgtgacaaccatcttcaataaccacatggttcatcacgacagaattgacaatc 19735

              
Query: 491   t 491
             |
Sbjct: 19736 t 19736



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 494   acattcgaaccgatacgacaatgacggccaat 525
             ||||| ||||| || |||||||||||||||||
Sbjct: 19973 acatttgaaccaattcgacaatgacggccaat 20004

>gb|AC093811.3| Homo sapiens BAC clone RP11-355H11 from 4, complete sequence
          Length = 115335

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 203   gaaaaataatctcaaaacagaa 224
             ||||||||||||||||||||||
Sbjct: 34682 gaaaaataatctcaaaacagaa 34661

>gb|AC112150.4| Mus musculus BAC clone RP24-84I17 from chromosome 16, complete sequence
          Length = 211640

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 336    gatcactaccagtagtcacag 356
              |||||||||||||||||||||
Sbjct: 107734 gatcactaccagtagtcacag 107754

>gb|AC104121.3| Homo sapiens chromosome 5 clone RP11-408O10, complete sequence
          Length = 127716

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 192   aaaaactgtaagaaaaataat 212
             |||||||||||||||||||||
Sbjct: 57908 aaaaactgtaagaaaaataat 57928

>emb|CT010517.11| Mouse DNA sequence from clone RP23-357P12 on chromosome 16, complete
             sequence
          Length = 188228

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 336   gatcactaccagtagtcacag 356
             |||||||||||||||||||||
Sbjct: 50501 gatcactaccagtagtcacag 50481

>emb|BX936451.13| Zebrafish DNA sequence from clone CH211-201F1 in linkage group 21,
              complete sequence
          Length = 169828

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    aaactgtaagaaaaataatc 213
              ||||||||||||||||||||
Sbjct: 124288 aaactgtaagaaaaataatc 124269

>gb|AC115805.12| Mus musculus chromosome 10, clone RP23-412P24, complete sequence
          Length = 193434

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    tcaaaacagaactgtatccc 233
              ||||||||||||||||||||
Sbjct: 162794 tcaaaacagaactgtatccc 162813

>gb|AC129325.4| Mus musculus BAC clone RP23-255J24 from 1, complete sequence
          Length = 194106

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 192    aaaaactgtaagaaaaataatctcaaaa 219
              |||||||| ||||||| |||||||||||
Sbjct: 118685 aaaaactgaaagaaaattaatctcaaaa 118658

>emb|AL365214.16| Human DNA sequence from clone RP11-506B6 on chromosome 6 Contains a fem-1
              homolog a (C. elegans) (FEM1A) pseudogene, a keratin 18
              (KRT18) pseudogene, a laminin receptor 1 (67kD, ribosomal
              protein SA) (LAMR1)(RPSA) pseudogene, a hepatocellular
              carcinoma-related putative tumor suppressor (LPTS)
              pseudogene and the 3' end of a novel gene, complete
              sequence
          Length = 210107

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 199    gtaagaaaaataatctcaaaacag 222
              |||||| |||||||||||||||||
Sbjct: 104892 gtaagagaaataatctcaaaacag 104869

>emb|CR376751.15| Zebrafish DNA sequence from clone CH211-220M6 in linkage group 8,
             complete sequence
          Length = 229078

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   gtaagaaaaataatctcaaa 218
             ||||||||||||||||||||
Sbjct: 28853 gtaagaaaaataatctcaaa 28872

>emb|CR847797.8| Zebrafish DNA sequence from clone DKEY-281F2 in linkage group 8,
             complete sequence
          Length = 219913

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   gtaagaaaaataatctcaaa 218
             ||||||||||||||||||||
Sbjct: 36273 gtaagaaaaataatctcaaa 36292

>emb|CR735102.8| Zebrafish DNA sequence from clone DKEYP-8H9 in linkage group 21,
             complete sequence
          Length = 118807

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   aaactgtaagaaaaataatc 213
             ||||||||||||||||||||
Sbjct: 75313 aaactgtaagaaaaataatc 75294

>gb|AC025370.12| Homo sapiens chromosome 8, clone RP11-318M2, complete sequence
          Length = 193589

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 436    gatgtgacagccatcttcaa 455
              ||||||||||||||||||||
Sbjct: 192416 gatgtgacagccatcttcaa 192435

>gb|AC009039.7| Homo sapiens chromosome 16 clone RP11-152O14, complete sequence
          Length = 163228

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 229   atcccctttctttactcataggag 252
             |||||||||||||||| |||||||
Sbjct: 43024 atcccctttctttactgataggag 43047

>gb|AC153419.13| Mus musculus 10 BAC RP23-291D21 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 199606

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   tcaaaacagaactgtatccc 233
             ||||||||||||||||||||
Sbjct: 41844 tcaaaacagaactgtatccc 41863

>gb|AC018469.5|AC018469 Homo sapiens BAC clone RP11-540I12 from 4, complete sequence
          Length = 168696

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    ctgtatcccctttctttact 244
              ||||||||||||||||||||
Sbjct: 105831 ctgtatcccctttctttact 105812

>gb|AC012679.5|AC012679 Arabidopsis thaliana chromosome 1 BAC F25P22 genomic sequence,
            complete sequence
          Length = 105937

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 192  aaaaactgtaagaaaaataa 211
            ||||||||||||||||||||
Sbjct: 8448 aaaaactgtaagaaaaataa 8429

>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 153     tgttactggaaccaaaattc 172
               ||||||||||||||||||||
Sbjct: 2655713 tgttactggaaccaaaattc 2655732

>gb|AF363578.1| Homo sapiens ATPase H+ transporting lysosomal protein (ATP6C) gene,
              complete cds; BAALC (BAALC) gene, complete cds,
              alternatively spliced; and frizzled-like protein 6 (FZD6)
              gene, complete cds
          Length = 347253

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 436    gatgtgacagccatcttcaa 455
              ||||||||||||||||||||
Sbjct: 154830 gatgtgacagccatcttcaa 154811

>gb|AC153653.4| Mus musculus BAC clone RP23-454L5 from 1, complete sequence
          Length = 180403

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 192   aaaaactgtaagaaaaataatctcaaaa 219
             |||||||| ||||||| |||||||||||
Sbjct: 99354 aaaaactgaaagaaaattaatctcaaaa 99381

>dbj|AP005855.2| Homo sapiens genomic DNA, chromosome 8q22, clone: KB1560G11, complete
            sequence
          Length = 152531

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 436  gatgtgacagccatcttcaa 455
            ||||||||||||||||||||
Sbjct: 4473 gatgtgacagccatcttcaa 4454

>emb|AL672249.6| Mouse DNA sequence from clone RP23-92P11 on chromosome X, complete
              sequence
          Length = 191671

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    gaaaaataatctcaaaacag 222
              ||||||||||||||||||||
Sbjct: 144387 gaaaaataatctcaaaacag 144368

>emb|AJ249395.1|GPA249395 Globodera pallida mitochondrial COII, ND4, COIII, ND6, ND1, ND3 and
            cytb genes
          Length = 9428

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 201  aagaaaaataatctcaaaacagaa 224
            ||||||||||| ||||||||||||
Sbjct: 7558 aagaaaaataagctcaaaacagaa 7535

>emb|AL808106.7| Mouse DNA sequence from clone RP23-281P6 on chromosome 2, complete
             sequence
          Length = 201419

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 166   aaaattctgctatcatatctcaaa 189
             ||||||||||||||| ||||||||
Sbjct: 77704 aaaattctgctatcacatctcaaa 77727

>dbj|AP003550.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1639H6, complete
              sequence
          Length = 140609

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 436    gatgtgacagccatcttcaa 455
              ||||||||||||||||||||
Sbjct: 138853 gatgtgacagccatcttcaa 138834


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,716,038
Number of Sequences: 3902068
Number of extensions: 4716038
Number of successful extensions: 88447
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88349
Number of HSP's gapped (non-prelim): 98
length of query: 536
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 513
effective length of database: 17,143,297,704
effective search space: 8794511722152
effective search space used: 8794511722152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)