ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal7p16 |
|---|---|
| Clone Library Name | barley_pub |
>SSM1_YEAST (P53078) Protein SSM1| Length = 280 Score = 40.0 bits (92), Expect = 0.006 Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%) Frame = -3 Query: 620 DLPRTPVL-CKPNVGAMEAALRIANVNPYK-AIFFDDSVRNIQAGKRIGLHTVL 465 D RT L CKP+V A E A++ + + Y+ A F DDS +NI+ G ++G+ T + Sbjct: 192 DYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCI 245
>YHCW_BACSU (P54607) Hypothetical protein yhcW| Length = 220 Score = 35.4 bits (80), Expect = 0.14 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 6/85 (7%) Frame = -3 Query: 629 SADDLPRTPVLCKPNVGAMEAALRIANVNPYKAIFFDDSVRNIQAGKRIGLHTVLVGTSH 450 +ADD+ KPN A + V+P + + F+DSV A KR G+ V+V + Sbjct: 133 TADDVEEV----KPNPELYLLAAKNLGVSPAECLAFEDSVNGSIAAKRAGMKCVIV--PN 186 Query: 449 RVKGA------DHALESIHNIREAL 393 +V G DH LES+ + AL Sbjct: 187 KVTGTLMFEDYDHRLESMAEMELAL 211
>PPAX_LISMO (Q8Y4G3) Pyrophosphatase ppaX (EC 3.6.1.1)| Length = 217 Score = 35.0 bits (79), Expect = 0.18 Identities = 18/55 (32%), Positives = 29/55 (52%) Frame = -3 Query: 593 KPNVGAMEAALRIANVNPYKAIFFDDSVRNIQAGKRIGLHTVLVGTSHRVKGADH 429 KP+ +E AL + N +AI D+ +I+AGK T+ G + +KG +H Sbjct: 141 KPDPEGIEMALSLLNATKEEAIMIGDNYHDIEAGK--NAETLTAGVAWAIKGPEH 193
>PPAX_LISMF (Q71WU6) Pyrophosphatase ppaX (EC 3.6.1.1)| Length = 217 Score = 35.0 bits (79), Expect = 0.18 Identities = 18/55 (32%), Positives = 29/55 (52%) Frame = -3 Query: 593 KPNVGAMEAALRIANVNPYKAIFFDDSVRNIQAGKRIGLHTVLVGTSHRVKGADH 429 KP+ +E AL + N +AI D+ +I+AGK T+ G + +KG +H Sbjct: 141 KPDPEGIEMALSLLNATKEEAIMIGDNYHDIEAGK--NAETLTAGVAWAIKGPEH 193
>PPAX_LISIN (Q928B2) Pyrophosphatase ppaX (EC 3.6.1.1)| Length = 217 Score = 35.0 bits (79), Expect = 0.18 Identities = 18/55 (32%), Positives = 29/55 (52%) Frame = -3 Query: 593 KPNVGAMEAALRIANVNPYKAIFFDDSVRNIQAGKRIGLHTVLVGTSHRVKGADH 429 KP+ +E AL + N +AI D+ +I+AGK T+ G + +KG +H Sbjct: 141 KPDPEGIEMALSLLNATKEEAIMIGDNYHDIEAGK--NAETLTAGVAWAIKGPEH 193
>YIEH_ECOLI (P31467) Phosphatase yieH (EC 3.1.3.-)| Length = 221 Score = 33.9 bits (76), Expect = 0.41 Identities = 22/72 (30%), Positives = 28/72 (38%) Frame = -3 Query: 593 KPNVGAMEAALRIANVNPYKAIFFDDSVRNIQAGKRIGLHTVLVGTSHRVKGADHALESI 414 KP+ M A + NVN I DDSV Q+G G+ K H + Sbjct: 142 KPDPALMFHAAKAMNVNVENCILVDDSVAGAQSGIDAGMEVFYFCADPHNKPIVHPKVTT 201 Query: 413 HNIREALPELWE 378 LPELW+ Sbjct: 202 FTHLSQLPELWK 213
>PO3F2_HUMAN (P20265) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 443 Score = 33.5 bits (75), Expect = 0.53 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = -2 Query: 576 HGSGAQDRQREPLQGDFLRRQRAQHSGRQANWPP----HGAGWHVTPGEGRGSRAGEH 415 HG GA +Q + Q ++Q+ Q +Q PP H A H PG R + A H Sbjct: 119 HGPGALQQQHQQQQQQQQQQQQQQQQQQQQQRPPHLVHHAANHHPGPGAWRSAAAAAH 176
>PGMB_BACSU (O06995) Putative beta-phosphoglucomutase (EC 5.4.2.6) (Beta-PGM)| Length = 226 Score = 33.1 bits (74), Expect = 0.70 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 1/88 (1%) Frame = -3 Query: 614 PRTPVLCKPNVGAMEAALRIANVNPYKAIFFDDSVRNIQAGKRIGLHTVLVGTSHRVKGA 435 P T KP+ A + +V+P +D+ I A K G+ V VG + GA Sbjct: 138 PTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPMLGA 197 Query: 434 DHALESIHNIR-EALPELWEEAEKTEDV 354 D + ++ E L E WE+ E + Sbjct: 198 DLVVRQTSDLTLELLHEEWEQYRIRESI 225
>YIHX_SHIFL (P0A8Y4) Phosphatase yihX (EC 3.1.3.-)| Length = 199 Score = 33.1 bits (74), Expect = 0.70 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = -3 Query: 593 KPNVGAMEAALRIANVNPYKAIFFDDSVRNIQAGKRIGLHTVLV 462 KP + L+ +P +FFDD+ NI+ ++G+ ++LV Sbjct: 141 KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184
>YIHX_ECOLI (P0A8Y3) Phosphatase yihX (EC 3.1.3.-)| Length = 199 Score = 33.1 bits (74), Expect = 0.70 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = -3 Query: 593 KPNVGAMEAALRIANVNPYKAIFFDDSVRNIQAGKRIGLHTVLV 462 KP + L+ +P +FFDD+ NI+ ++G+ ++LV Sbjct: 141 KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184
>GMHB_PASMU (Q9CK98) D,D-heptose 1,7-bisphosphate phosphatase (EC 3.1.3.-)| (D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase) Length = 184 Score = 33.1 bits (74), Expect = 0.70 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 6/76 (7%) Frame = -3 Query: 593 KPNVGAMEAALRIANVNPYKAIFFDDSVRNIQAGKRIGL-HTVLVGTSHRV-----KGAD 432 KP G + A++ N++P + D V ++ AGK + +TVLV T + K A+ Sbjct: 107 KPKPGMLLQAIKELNIDPNTSFMVGDKVEDMLAGKGAKIKNTVLVKTGKPITEDGKKQAN 166 Query: 431 HALESIHNIREALPEL 384 + LESI ++ + + L Sbjct: 167 YVLESIADLPKLIKGL 182
>IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27)| Length = 512 Score = 32.3 bits (72), Expect = 1.2 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Frame = -2 Query: 585 RRRHGSGAQDRQREPLQGDFLRRQRAQHSGRQANWPPHGAGWHVTPG--EGRGSRAGEHP 412 R R G GA D +P R+RA + R P GAGW PG G R E P Sbjct: 148 RGRGGPGAADGLSDP-------RRRAPRTNRNPGGPRPGAGWTDGPGAPHGEAWRGSEQP 200
>GPH1_PSEAE (Q9S586) Phosphoglycolate phosphatase 1 (EC 3.1.3.18) (PGPase 1)| (PGP 1) Length = 272 Score = 32.3 bits (72), Expect = 1.2 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%) Frame = -3 Query: 623 DDLPRTPVLCKPNVGAMEAALRIANVNPYKAIFFDDSVRNIQAGKRIGLH--TVLVGTSH 450 D LP+ KP+ A+ +++A + P A+F DS ++ A K G+ + G +H Sbjct: 151 DTLPQQ----KPDPAALLFVMKMAGIEPEDALFVGDSRNDVLAAKAAGVRCAALTYGYNH 206 Query: 449 RVKGADHA-LESIHNIREALPELWEEAE 369 A+ A I N+R+ LP + AE Sbjct: 207 GRPIAEEAPTLVIDNLRDLLPCADQAAE 234
>RS3_NITMU (Q2YAZ1) 30S ribosomal protein S3| Length = 286 Score = 32.3 bits (72), Expect = 1.2 Identities = 43/176 (24%), Positives = 64/176 (36%), Gaps = 9/176 (5%) Frame = -3 Query: 593 KPNVGAMEAALRIANVNPYKAIFFDDSVRNIQAGKRIGLHTVLVGTSHRVKGADHALES- 417 KP + A A IA + +F R +Q R+G + + +S R+ G + A Sbjct: 108 KPEIDAQLIADNIAQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEW 167 Query: 416 -------IHNIREALPELWEEAEKTEDVLYADRVAIETSVTXXXXXXXXXXXXPSV*YPK 258 +H +R L EA+ T V+ + V P V P Sbjct: 168 YREGRVPLHTLRADLDYGVSEAKTTYGVIGIKVWVFKGEVIGRGEQAGAGTAAPQVLPPA 227 Query: 257 RNPIRPGVPE-PAGLLVIITWNSALAGKKQYPARGGGSSEKSGINAACTPCRAGPN 93 P P PAG + AG+K+ P + SSE+S A P + G N Sbjct: 228 GEPETRRPPRRPAGRAD--ARSDGKAGEKKGPRKSDNSSEESATKPAKKPVKPGVN 281
>KR109_HUMAN (P60411) Keratin-associated protein 10-9 (Keratin-associated| protein 10.9) (High sulfur keratin-associated protein 10.9) (Keratin-associated protein 18-9) (Keratin-associated protein 18.9) Length = 292 Score = 32.0 bits (71), Expect = 1.6 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +2 Query: 440 PSPGVTCQPAPC--GGQFACLPECCARCRRRKSPCKGS 547 P VTC+P+PC G +C P CC + + + C S Sbjct: 56 PCCQVTCEPSPCQSGCTSSCTPSCCQQSSCQPAYCTSS 93
>CBBY_RHOSH (P95649) Protein cbbY| Length = 230 Score = 32.0 bits (71), Expect = 1.6 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Frame = -3 Query: 593 KPNVGAMEAALRIANVNPYKAIFFDDSVRNIQAGKRIGLHTVL---VGTSH-RVKGADHA 426 KP+ ALR +V P +A+ +DS+ ++A K GL ++ T H GAD Sbjct: 151 KPSPDIYRLALRELDVPPERAVALEDSLNGLRAAKGAGLRCIVSPGFYTRHEEFAGADRL 210 Query: 425 LES 417 L+S Sbjct: 211 LDS 213
>GMHB_ANETH (Q9AGY5) D,D-heptose 1,7-bisphosphate phosphatase (EC 3.1.3.-)| (D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase) Length = 179 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/49 (30%), Positives = 30/49 (61%) Frame = -3 Query: 593 KPNVGAMEAALRIANVNPYKAIFFDDSVRNIQAGKRIGLHTVLVGTSHR 447 KPN G + + + N++ K+I D +IQAGKR G++ ++ ++++ Sbjct: 109 KPNPGMILKSQKEFNIDLSKSILVGDKESDIQAGKRAGVNVNIIFSNNK 157
>KR10C_HUMAN (P60413) Keratin-associated protein 10-12 (Keratin-associated| protein 10.12) (High sulfur keratin-associated protein 10.12) (Keratin-associated protein 18-12) (Keratin-associated protein 18.12) Length = 245 Score = 32.0 bits (71), Expect = 1.6 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +2 Query: 440 PSPGVTCQPAPC--GGQFACLPECCARCRRRKSPCKGS 547 P VTC+P+PC G +C P CC + + + C S Sbjct: 61 PCCRVTCEPSPCQSGCTSSCTPSCCQQSSCQPACCTSS 98
>POLS_EEEV3 (P27284) Structural polyprotein (p130) [Contains: Capsid protein| (EC 3.4.21.-) (Coat protein) (C); p62 (E3/E2); E3 protein (Spike glycoprotein E3); E2 envelope glycoprotein (Spike glycoprotein E2); 6K protein; E1 envelope glycoprotein (Spike g Length = 1240 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/40 (37%), Positives = 27/40 (67%) Frame = -2 Query: 630 QRRRPAQDPRPMQAQRRRHGSGAQDRQREPLQGDFLRRQR 511 +R++PA P+P QA+++R A+ ++R+P G +RQR Sbjct: 66 KRKKPAPKPKPAQAKKKRPPPPAKKQKRKPKPG---KRQR 102
>KR106_HUMAN (P60371) Keratin-associated protein 10-6 (Keratin-associated| protein 10.6) (High sulfur keratin-associated protein 10.6) (Keratin-associated protein 18-6) (Keratin-associated protein 18.6) Length = 365 Score = 31.6 bits (70), Expect = 2.0 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +2 Query: 440 PSPGVTCQPAPC--GGQFACLPECCARCRRRKSPCKGS 547 P VTC+P+PC G +C P CC + + + C S Sbjct: 66 PCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASS 103
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 31.6 bits (70), Expect = 2.0 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = -2 Query: 582 RRHGSGAQDRQREPLQGDFLRRQRAQHSGRQANWPPHGAGWHVTPGEGR-GSRAGEHP 412 R+HGS + R Q SG +++ HG+G H + G GR GS +G P Sbjct: 727 RKHGSRSGQSSRS--------EQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSP 776
>KR107_HUMAN (P60409) Keratin-associated protein 10-7 (Keratin-associated| protein 10.7) (High sulfur keratin-associated protein 10.7) (Keratin-associated protein 18-7) (Keratin-associated protein 18.7) Length = 370 Score = 31.6 bits (70), Expect = 2.0 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +2 Query: 440 PSPGVTCQPAPC--GGQFACLPECCARCRRRKSPCKGS 547 P VTC+P+PC G +C P CC + + + C S Sbjct: 66 PCCRVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASS 103
>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated| protein 10.4) (High sulfur keratin-associated protein 10.4) (Keratin-associated protein 18-4) (Keratin-associated protein 18.4) Length = 401 Score = 31.6 bits (70), Expect = 2.0 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +2 Query: 440 PSPGVTCQPAPC--GGQFACLPECCARCRRRKSPCKGS 547 P VTC+P+PC G +C P CC + + + C S Sbjct: 66 PCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASS 103
>VE2_HPV45 (P36794) Regulatory protein E2| Length = 368 Score = 31.2 bits (69), Expect = 2.6 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Frame = -2 Query: 264 PQAQPDPTRRPRACRTTGDHH--VEFSIGREKTVSSTRRGELRKVRN*CGMHTMP 106 P Q T+RPR C T HH V + SST + RKV C +T P Sbjct: 241 PHIQTPATKRPRQCGLTEQHHGRVNTHVHNPLLCSSTSNNKRRKV---CSGNTTP 292
>PO3F2_MOUSE (P31360) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 445 Score = 31.2 bits (69), Expect = 2.6 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Frame = -2 Query: 576 HGSGA--QDRQREPLQGDFLRRQRAQHSGRQANWPPH----GAGWHVTPGEGRGSRAGEH 415 HG GA Q Q++ Q ++Q+ Q +Q PPH A H PG R + A H Sbjct: 119 HGPGALQQQHQQQQQQQQQQQQQQQQQQQQQQQRPPHLVHHAANHHPGPGAWRSAAAAAH 178
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 31.2 bits (69), Expect = 2.6 Identities = 21/65 (32%), Positives = 27/65 (41%) Frame = -2 Query: 621 RPAQDPRPMQAQRRRHGSGAQDRQREPLQGDFLRRQRAQHSGRQANWPPHGAGWHVTPGE 442 R A PR +A+ G +D +R+P R R SG + P G G PG Sbjct: 487 RSASSPRGARARSPSRGRHPEDAKRQP-------RGRPSSSGTPRDGPAGGTGGSGGPGG 539 Query: 441 GRGSR 427 GSR Sbjct: 540 SLGSR 544
>CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor| Length = 1775 Score = 31.2 bits (69), Expect = 2.6 Identities = 17/50 (34%), Positives = 21/50 (42%) Frame = -3 Query: 245 RPGVPEPAGLLVIITWNSALAGKKQYPARGGGSSEKSGINAACTPCRAGP 96 RPG P AG AG+ P + G K + C+ CRAGP Sbjct: 532 RPGTPGAAGA----PGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGP 577
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 30.8 bits (68), Expect = 3.5 Identities = 21/65 (32%), Positives = 26/65 (40%) Frame = -2 Query: 621 RPAQDPRPMQAQRRRHGSGAQDRQREPLQGDFLRRQRAQHSGRQANWPPHGAGWHVTPGE 442 R A PR +A+ G +D +R+P R R SG P G G PG Sbjct: 487 RSASSPRGARARSPSRGRHPEDAKRQP-------RGRPSSSGTPREGPAGGTGGSGGPGG 539 Query: 441 GRGSR 427 GSR Sbjct: 540 SLGSR 544
>KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-associated| protein 10.5) (High sulfur keratin-associated protein 10.5) (Keratin-associated protein 18-5) (Keratin-associated protein 18.5) Length = 271 Score = 30.8 bits (68), Expect = 3.5 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%) Frame = +2 Query: 440 PSPGVTCQPAPC--GGQFACLPECCARCRRRKSPCK 541 P C+P+PC G +C P CC SPC+ Sbjct: 50 PCCQAACEPSPCQSGCTSSCTPSCCQPACCASSPCQ 85
>MAML3_HUMAN (Q96JK9) Mastermind-like protein 3 (Mam-3)| Length = 1133 Score = 30.8 bits (68), Expect = 3.5 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 5/55 (9%) Frame = -2 Query: 618 PAQDPRPMQAQRRRHGS-----GAQDRQREPLQGDFLRRQRAQHSGRQANWPPHG 469 PA+ + M AQ+++ Q +Q++ Q ++Q+ QHS + +NW P G Sbjct: 464 PAEQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQQQHSNQTSNWSPLG 518
>CYOE_ECOLI (P0AEA5) Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme O| synthase) Length = 296 Score = 30.8 bits (68), Expect = 3.5 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +1 Query: 67 YILHIHIHILGPARHGVHAALIPDFSELPPPRAGYC 174 +++++ ++ L RH V+ LI S PP GYC Sbjct: 117 FVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYC 152
>CYOE_ECOL6 (P0AEA6) Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme O| synthase) Length = 296 Score = 30.8 bits (68), Expect = 3.5 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +1 Query: 67 YILHIHIHILGPARHGVHAALIPDFSELPPPRAGYC 174 +++++ ++ L RH V+ LI S PP GYC Sbjct: 117 FVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYC 152
>CYOE_ECO57 (P0AEA7) Protoheme IX farnesyltransferase (EC 2.5.1.-) (Heme O| synthase) Length = 296 Score = 30.8 bits (68), Expect = 3.5 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +1 Query: 67 YILHIHIHILGPARHGVHAALIPDFSELPPPRAGYC 174 +++++ ++ L RH V+ LI S PP GYC Sbjct: 117 FVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYC 152
>RP3A_RAT (P47709) Rabphilin-3A (Exophilin-1)| Length = 684 Score = 30.4 bits (67), Expect = 4.5 Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Frame = -2 Query: 576 HGSGAQDRQREPLQGDFLRRQRAQHSGR--QANWPPHGAGWHVTPGEGRGSRAGEHP 412 HG GA D R P LRR + + R A+ P V PG GSRA P Sbjct: 252 HGGGAGDTSRSPGGEQGLRRANSVQASRPAPASMPSPAPPQPVQPGPPGGSRAAPGP 308
>PO3F2_RAT (P56222) POU domain, class 3, transcription factor 2 (Nervous| system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2) Length = 445 Score = 30.4 bits (67), Expect = 4.5 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Frame = -2 Query: 576 HGSGA--QDRQREPLQGDFLRRQRAQHSGRQANWPPH----GAGWHVTPGEGRGSRAGEH 415 HG GA Q Q++ Q ++Q+ Q +Q PPH A H PG R + A H Sbjct: 119 HGPGALQQQHQQQQQQQQQQQQQQQQQQQQQQQRPPHLVHHAANNHPGPGAWRSAAAAAH 178
>GPH_AQUAE (O67359) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 213 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -3 Query: 593 KPNVGAMEAALRIANVNPYKAIFFDDSVRNIQAGKRIGLHTVL 465 KP+ + L I P KA+ D+ +I+AGKR G T L Sbjct: 137 KPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTAL 179
>T2_MOUSE (Q06666) Octapeptide-repeat protein T2| Length = 185 Score = 30.0 bits (66), Expect = 5.9 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = -2 Query: 627 RRRPAQDPRPMQAQRRRHGSGAQDRQREPLQGDFLRRQRAQHSGRQA 487 R R A+ R +++R+R +RQRE +G RQR + GR+A Sbjct: 5 REREAESQRVRESERQRGREA--ERQRERQRGREAERQRGRERGREA 49
>K0355_HUMAN (O15063) Protein KIAA0355| Length = 1070 Score = 30.0 bits (66), Expect = 5.9 Identities = 14/47 (29%), Positives = 18/47 (38%) Frame = -2 Query: 588 QRRRHGSGAQDRQREPLQGDFLRRQRAQHSGRQANWPPHGAGWHVTP 448 QRR+H SG QD P + + WPP H +P Sbjct: 940 QRRKHSSGEQDTSTLPSPPLLTTVEDVNQDNKTKTWPPKAPWQHPSP 986
>SEM3F_HUMAN (Q13275) Semaphorin-3F precursor (Semaphorin IV) (Sema IV) (Sema| III/F) Length = 785 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = +1 Query: 70 ILHIHIHILGPARHGVHAALIP--DFSELPPPRAG 168 + + +H+LG R VHAAL P S PPP AG Sbjct: 689 VTRVQLHVLG--RDAVHAALFPPLSMSAPPPPGAG 721
>HSPC_ELECI (P83183) Cysteine-rich protamine| Length = 84 Score = 29.6 bits (65), Expect = 7.7 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Frame = +2 Query: 473 CGGQFACLPECCARCR-RRKSPCKGSRWRS*APLP--WRRRWACIGRGSWAGRRRC 631 CG + C P C RCR R K C+ R R + RRR C R RRRC Sbjct: 2 CGSKPRCRPRCKPRCRSRSKKRCRRCRRRCSRIVKKCCRRRSKCCRR-----RRRC 52
>HFR1_ARATH (Q9FE22) Long hypocotyl in far-red 1 (bHLH-like protein HFR1)| (Reduced phytochrome signaling) (Basic helix-loop-helix FBI1 protein) (Basic helix-loop-helix protein 26) (bHLH26) (AtbHLH026) (Reduced sensitivity to far-red light) Length = 292 Score = 29.6 bits (65), Expect = 7.7 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = +1 Query: 88 HILGPARHGVHAALIPDFSELPPPRAGYCFFPANAEFHVMITSSPAGS 231 H L PA H + + LIP + PP F ++++ + TSSPA S Sbjct: 220 HGLNPANHMMPSPLIPALNWPLPPFTNISFPHSSSQSLFLTTSSPASS 267
>GPH_PSESS (P42510) Probable phosphoglycolate phosphatase (EC 3.1.3.18)| (PGPase) (PGP) (Fragment) Length = 160 Score = 29.6 bits (65), Expect = 7.7 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%) Frame = -3 Query: 593 KPNVGAMEAALRIANVNPYKAIFFDDSVRNIQAGKRIGLHTVLV--GTSH-RVKGADHAL 423 KP+ A+ +++A V +A+F DS ++QA K G+ V + G +H R ++ Sbjct: 45 KPDPAALFFVMKMAGVPASQALFVGDSRSDVQAAKAAGVACVALSYGYNHGRPIAEENPA 104 Query: 422 ESIHNIREALP 390 I ++R+ +P Sbjct: 105 MVIDDLRKLIP 115
>COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor| Length = 674 Score = 29.6 bits (65), Expect = 7.7 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 9/64 (14%) Frame = -3 Query: 263 PKRNPIRPGVPEPAGLLVI----ITWNSALAGKKQYPARGG-----GSSEKSGINAACTP 111 P+ P PG+P PAG+ V + G + +P G G + + G CTP Sbjct: 137 PRGPPGPPGIPGPAGISVPGKPGPQGPTGEPGPRGFPGEKGTSGVPGLNGQKGEMGHCTP 196 Query: 110 CRAG 99 CR G Sbjct: 197 CRPG 200
>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated| protein 10.8) (High sulfur keratin-associated protein 10.8) (Keratin-associated protein 18-8) (Keratin-associated protein 18.8) Length = 259 Score = 29.6 bits (65), Expect = 7.7 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Frame = +2 Query: 452 VTCQPAPC--GGQFACLPECCARCRRRKSPCKGS 547 V+C+P+PC G +C P CC + + + C S Sbjct: 79 VSCEPSPCQSGCTDSCTPSCCQQSSCQPACCTSS 112 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,011,378 Number of Sequences: 219361 Number of extensions: 1871088 Number of successful extensions: 7747 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 6848 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7646 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
