ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal35d09 |
|---|---|
| Clone Library Name | barley_pub |
>K1949_MACMU (Q5TM66) Protein KIAA1949 homolog| Length = 613 Score = 35.8 bits (81), Expect = 0.026 Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 12/105 (11%) Frame = +2 Query: 80 AEEKKNAPCEKQEEEKGNPISNDEPLSRERSAPTFPCLGGTEERGGR----NSWRLRTGE 247 A E++ +P E +++ S +E LS + +GG +E R WR GE Sbjct: 119 ARERRPSPGEMRDQSPKGRESREERLSPRETRERRLGIGGAQESSLRPLEARDWRQSPGE 178 Query: 248 AGDQALRAGD--------GRPPAERRLHGCGGVEEDPRRPGEEHR 358 GD++ R + G P ER L E+ PRR E R Sbjct: 179 VGDRSSRLSEPWKWRLSPGETP-ERSLRLAESREQSPRRKEVESR 222
>K1949_PIG (Q767M0) Protein KIAA1949 homolog| Length = 618 Score = 35.4 bits (80), Expect = 0.035 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 11/98 (11%) Frame = +2 Query: 80 AEEKKNAPCEKQEEEKGNPISNDEPLSRERSAPTFPCLGGTEERGGR----NSWRLRTGE 247 A E +++P E +++ S +E LS + +GG E R WR GE Sbjct: 125 AREWRSSPGEMRDQSPKERESREERLSPREARERRLGIGGARESSPRPLESRDWRQSPGE 184 Query: 248 AGDQALRAGDGR-------PPAERRLHGCGGVEEDPRR 340 AGD++ R + R ER L E+ PRR Sbjct: 185 AGDRSSRLSEVRKWRLSPGETPERSLRPAEPQEQSPRR 222
>K1949_HUMAN (Q6NYC8) Protein KIAA1949| Length = 613 Score = 35.4 bits (80), Expect = 0.035 Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 12/105 (11%) Frame = +2 Query: 80 AEEKKNAPCEKQEEEKGNPISNDEPLSRERSAPTFPCLGGTEERGGR----NSWRLRTGE 247 A E++ +P E +++ S +E LS + +GG +E R WR GE Sbjct: 119 ARERRPSPGEMRDQSPKGRESREERLSPRETRERRLGIGGAQELSLRPLEARDWRQSPGE 178 Query: 248 AGDQALRAGD--------GRPPAERRLHGCGGVEEDPRRPGEEHR 358 GD++ R + G P ER L E+ PRR E R Sbjct: 179 VGDRSSRLSEAWKWRLSPGETP-ERSLRLAESREQSPRRKEVESR 222
>XPC_HUMAN (Q01831) DNA-repair protein complementing XP-C cells (Xeroderma| pigmentosum group C complementing protein) (p125) Length = 939 Score = 35.0 bits (79), Expect = 0.045 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 7/84 (8%) Frame = +2 Query: 71 NRPAEEKKNAPCEKQEEE----KGNPISNDEPLSRER---SAPTFPCLGGTEERGGRNSW 229 N+ +K++ P +E+E K + P RER S ++ G++E G + + Sbjct: 385 NKGGRKKRSKPSSSEEDEGPGDKQEKATQRRPHGRERRVASRVSYKEESGSDEAGSGSDF 444 Query: 230 RLRTGEAGDQALRAGDGRPPAERR 301 L +GEA D + + PP +R+ Sbjct: 445 ELSSGEASDPSDEDSEPGPPKQRK 468
>SAFB1_HUMAN (Q15424) Scaffold attachment factor B (Scaffold attachment factor| B1) (SAF-B) (HSP27 estrogen response element-TATA box-binding protein) (HSP27 ERE-TATA-binding protein) Length = 915 Score = 33.5 bits (75), Expect = 0.13 Identities = 22/58 (37%), Positives = 26/58 (44%) Frame = +2 Query: 164 ERSAPTFPCLGGTEERGGRNSWRLRTGEAGDQALRAGDGRPPAERRLHGCGGVEEDPR 337 ER +P G ER GR+S G D+ + G G PP RR G G ED R Sbjct: 774 EREGQHYPERHGGPERHGRDSRDGWGGYGSDKRMSEGRGLPPPPRRDWGDHGRREDDR 831
>LTBP2_HUMAN (Q14767) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1821 Score = 33.1 bits (74), Expect = 0.17 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 9/64 (14%) Frame = +2 Query: 53 PGCNDXNRPAEEKKNAPCEKQEE---------EKGNPISNDEPLSRERSAPTFPCLGGTE 205 PG RP E + P Q+ + P+ +P R R+AP P L GT Sbjct: 90 PGWGSPRRPTEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALPRL-GTP 148 Query: 206 ERGG 217 +R G Sbjct: 149 QRSG 152
>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 427 Score = 32.7 bits (73), Expect = 0.22 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 7/83 (8%) Frame = +2 Query: 71 NRPAEEKKNAPCEKQEEEKGNPISNDEPLSRERSAPTFPCLGGTEERGGRN------SWR 232 +RP EE++ + + +E E+ +S+++P R R P ++GGR+ R Sbjct: 259 SRPREEREKSREKGKERERSRELSHEQPRERSRDRPREDKHHRDRDQGGRDRDRDSRRDR 318 Query: 233 LRTGEAGDQALRAGD-GRPPAER 298 RT + GD+ R D GR R Sbjct: 319 DRTRDRGDRDRRDRDRGRDRTSR 341
>CO6A1_MOUSE (Q04857) Collagen alpha-1(VI) chain precursor| Length = 1025 Score = 32.3 bits (72), Expect = 0.29 Identities = 33/113 (29%), Positives = 39/113 (34%), Gaps = 5/113 (4%) Frame = +2 Query: 26 PGRRRCTHMPGCNDXNRPAEEKKNAPCEKQEEEKGNPISNDEPLSRERSAPTFPCLGGTE 205 PG C PG + P K +A + EKG ++ E S G E Sbjct: 339 PGLPGCKGSPGFDGIQGPPGPKGDAGAFGMKGEKGEAGADGEAGRPGNSGSP-----GDE 393 Query: 206 ERGGRNSWRLRTGEAGDQALRAGDGRP-----PAERRLHGCGGVEEDPRRPGE 349 G GEAGD+ DG P P ER G GV PGE Sbjct: 394 GDPGEPGPPGEKGEAGDEGNAGPDGAPGERGGPGERGPRGTPGVRGPRGDPGE 446
>CO6A1_HUMAN (P12109) Collagen alpha-1(VI) chain precursor| Length = 1028 Score = 32.3 bits (72), Expect = 0.29 Identities = 32/113 (28%), Positives = 39/113 (34%), Gaps = 5/113 (4%) Frame = +2 Query: 26 PGRRRCTHMPGCNDXNRPAEEKKNAPCEKQEEEKGNPISNDEPLSRERSAPTFPCLGGTE 205 PG C PG + P K + + EKG P ++ E P+ G E Sbjct: 340 PGLPGCKGSPGFDGIQGPPGPKGDPGAFGLKGEKGEPGADGEAGRPGARGPS-----GDE 394 Query: 206 ERGGRNSWRLRTGEAGDQALRAGDGRP-----PAERRLHGCGGVEEDPRRPGE 349 G GEAGD+ DG P P ER G G PGE Sbjct: 395 GPAGEPGPPGEKGEAGDEGNPGPDGAPGERGGPGERGPRGTPGPRGPRGDPGE 447
>DCLZ_ECOLI (P52095) Lysine decarboxylase, constitutive (EC 4.1.1.18) (LDC)| Length = 713 Score = 31.6 bits (70), Expect = 0.50 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 5/52 (9%) Frame = +3 Query: 129 GTQLVMTNPCHESDQHLLSPASVV-----PRKEGAGILGGCVPVRPVIRPSV 269 G+ L++ CH+S HLL VV P + GILGG +P R R S+ Sbjct: 235 GSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGG-IPRREFTRDSI 285
>SUHW4_MOUSE (Q68FE8) Suppressor of hairy wing homolog 4| Length = 974 Score = 31.6 bits (70), Expect = 0.50 Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 1/103 (0%) Frame = +2 Query: 44 THMPGCNDXNRPAEEKKNAPCEKQEEEKGNPISNDEPLSRERSAPTFPCLGGTEERGGRN 223 +H P EEK + C++ E + + P E S+ T R Sbjct: 831 SHDPDVGTDTMEKEEKTHHACQEMELKVDQSSESTNPTEAELSSET------------RQ 878 Query: 224 SWRLRTGEAG-DQALRAGDGRPPAERRLHGCGGVEEDPRRPGE 349 +L +G+ G DQ LR GD G V +P P E Sbjct: 879 GLQLTSGDVGIDQFLRQGDEPKSVNSDASDPGSVRLEPLTPSE 921
>SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precursor (Acetyl LDL| receptor) (Scavenger receptor class F member 1) Length = 830 Score = 31.6 bits (70), Expect = 0.50 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%) Frame = +2 Query: 101 PCEKQEEEKGNP-ISNDEPLSRERSAPTFPCLGGTEERGGRNSWRLRTGEAGDQALRAGD 277 P + +KG+P +++ SAP G T R +R AG ++ R Sbjct: 732 PRQALNRKKGSPGLASGSVGQSPNSAPKAGLPGATGPMAVRPEEAVRGLGAGTESSRR-- 789 Query: 278 GRPPAERRLHGCGGVEEDPRRPGEEHR 358 A+ + GCG E+DP++ EE R Sbjct: 790 ----AQEPVSGCGSPEQDPQKQAEEER 812
>FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein)| Length = 1206 Score = 30.4 bits (67), Expect = 1.1 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Frame = +2 Query: 77 PAEEKKNAPCEKQEE-EKGNPISNDEPLSRERSAPTFPCLGGTEERGGRNSWRLRTGEAG 253 P++E K+ + +E + GN ++D L E S T P E GG S Sbjct: 176 PSQEPKDRAGDSEENTDTGN--TDDTELCAEESQRTLPETSSKLELGGDGSHPAEHSPRQ 233 Query: 254 DQALRAGDGRPPA 292 DQA G PPA Sbjct: 234 DQAAEEGSQIPPA 246
>YM67_YEAST (Q03661) Hypothetical 187.1 kDa protein in GUA1-ERG8 intergenic| region Length = 1658 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +2 Query: 101 PCEKQEEEKGNPISNDEPLSRERSAPTFP 187 P +K+E P SN E ++ E+SAPT P Sbjct: 1453 PSDKEEVTDSYPYSNSENITAEKSAPTSP 1481
>K1024_HUMAN (Q9UPX6) UPF0258 protein KIAA1024| Length = 916 Score = 30.0 bits (66), Expect = 1.5 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 2/101 (1%) Frame = +2 Query: 62 NDXNRPAEEKKNAPCEKQEEEKGNPISNDEPLSRERSAPTFPCLGGTEERGG--RNSWRL 235 N P +K+ A E ++ + + P+ + A CLG ++ SW L Sbjct: 314 NPVYSPVPDKRRAKHESLDDLQASTYFGPTPVMGTQEARR--CLGKPNKQTPWPAKSWSL 371 Query: 236 RTGEAGDQALRAGDGRPPAERRLHGCGGVEEDPRRPGEEHR 358 T E D R+ R P+E +LH + P P E R Sbjct: 372 NTEEVPDFE-RSFFNRNPSEEKLHYPNASSQTPNFPAPERR 411
>NEST_HUMAN (P48681) Nestin| Length = 1618 Score = 30.0 bits (66), Expect = 1.5 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 1/83 (1%) Frame = +2 Query: 83 EEKKNAPCEKQEEEKGNPISNDEPLSRERSAPTFPCLGGTEERGGRNSWRLRTGEAG-DQ 259 EE + + E +E+E G + + PL +PT P E RG TG+ G D Sbjct: 1276 EEGEESREESEEDELGETLPDSTPLGFYLRSPTSPRWTPLESRGHPLK---ETGKEGWDP 1332 Query: 260 ALRAGDGRPPAERRLHGCGGVEE 328 A+ A +G + G G EE Sbjct: 1333 AVLASEGLEEPSEKEEGEEGEEE 1355
>RL12_PYRAB (Q9UXS6) 50S ribosomal protein L12P| Length = 107 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = +2 Query: 53 PGCNDXNRPAEEKKNAPCEKQEEEKGNPISNDEPLS 160 P PAEEKK EK+EEEK +S +E L+ Sbjct: 67 PAAAPAEAPAEEKKEE--EKKEEEKEEEVSEEEALA 100
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 6/46 (13%) Frame = -1 Query: 302 GGVPPVGGHRQHGGP------DHRPHRYAASKNSCPLFPRYHRGRG 183 GG+ GGHR H GP HRPH + P H RG Sbjct: 822 GGMGAGGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRG 867 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 4/46 (8%) Frame = -1 Query: 308 RAGGVPPVG----GHRQHGGPDHRPHRYAASKNSCPLFPRYHRGRG 183 R+GG PP G G GG HRPH S R H G G Sbjct: 732 RSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMSSGSGHRPHEGPG 777
>DCLY_HAFAL (P05033) Lysine decarboxylase (EC 4.1.1.18) (LDC)| Length = 739 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Frame = +3 Query: 129 GTQLVMTNPCHESDQHLLSPASVV-----PRKEGAGILGGCVPVRPVIRPSVLAMAAHRR 293 G +++ CH+S HL+ ++VV P + GILGG +P R S+ + Sbjct: 235 GATILIDRNCHKSLTHLMMMSNVVPVYLRPTRNAYGILGG-IPQSEFTRASIEEKVKNTP 293 Query: 294 NA 299 NA Sbjct: 294 NA 295
>MYPT1_RAT (Q10728) Protein phosphatase 1 regulatory subunit 12A (Myosin| phosphatase-targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit) (MBSP) (Serine/threonine protein phosphatase PP1 smooth muscle reg Length = 1032 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +2 Query: 29 GRRRCTHMPGCNDXNRPAEEKKNAPCEKQEEEKGNPISNDEPLSRERS 172 GR R T + + EEK+ EKQEE+K + +S ++ ++ S Sbjct: 713 GRSRSTRTREQENEEKDKEEKEKQDKEKQEEKKESEVSREDEYKQKYS 760
>SYL1_SULAC (Q4JBP0) Leucyl-tRNA synthetase 1 (EC 6.1.1.4) (Leucine--tRNA| ligase 1) (LeuRS 1) Length = 942 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +3 Query: 81 LKKRKTLPARSKKRKRGTQLVMTNPCHESDQHL 179 LKK LP++ + K+GT +VM P HE +L Sbjct: 289 LKKLTVLPSKYVESKQGTGVVMAVPAHEPLHYL 321
>Y640_SYNY3 (P72958) Hypothetical protein sll0640| Length = 612 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = -2 Query: 166 LS*QGFVITNWVPLFLFLLLAGSVFLFFSGPILIIAARHM 47 L+ QGF I + PL L G +++ + PIL+ A R++ Sbjct: 176 LTGQGFSIFQFTPLGLLTFSVGLIYIVLAAPILLPARRNI 215
>NCOA2_MOUSE (Q61026) Nuclear receptor coactivator 2 (NCoA-2) (Transcriptional| intermediary factor 2) (Glucocorticoid receptor-interacting protein 1) (GRIP-1) Length = 1462 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 Query: 30 EGEDVHICRAAMXRIGPLKKRKTLPA 107 EGED+ C + R P+K+R TLP+ Sbjct: 241 EGEDLQSCLICVARRVPMKERPTLPS 266
>LAC1_PYCCI (O59896) Laccase precursor (EC 1.10.3.2) (Benzenediol:oxygen| oxidoreductase) (Urishiol oxidase) (Ligninolytic phenoloxidase) Length = 518 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +3 Query: 132 TQLVMTNPCHESDQHLLSPASVVPRKEGAGI 224 TQ T P +E+D H L+P V R E G+ Sbjct: 313 TQTTSTKPLNEADLHPLTPMPVPGRPEAGGV 343
>SPA1_STAAU (P02976) Immunoglobulin G binding protein A precursor (IgG binding| protein A) (Staphylococcal protein A) Length = 524 Score = 28.9 bits (63), Expect = 3.2 Identities = 26/109 (23%), Positives = 46/109 (42%) Frame = +2 Query: 26 PGRRRCTHMPGCNDXNRPAEEKKNAPCEKQEEEKGNPISNDEPLSRERSAPTFPCLGGTE 205 PG+ + PG D N+P +E N P K++ K N++P + + P Sbjct: 334 PGKED-NNKPGKEDNNKPGKEDNNKP-GKEDNNKPGKEDNNKPGKEDGNKP--------- 382 Query: 206 ERGGRNSWRLRTGEAGDQALRAGDGRPPAERRLHGCGGVEEDPRRPGEE 352 G+ + E G++ + + +P E G +ED +PG+E Sbjct: 383 ---GKEDNKKPGKEDGNKPGKEDNKKPGKE---DGNKPGKEDGNKPGKE 425 Score = 27.7 bits (60), Expect = 7.2 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 2/99 (2%) Frame = +2 Query: 62 NDXNRPAEEKKNAPCEKQEEEKGNPISNDEPLSRERSAPTFPCLGGTEE--RGGRNSWRL 235 ND P EE N P K++ K N++P + + P G E+ + G+ Sbjct: 321 NDAQAPKEEDNNKP-GKEDNNKPGKEDNNKPGKEDNNKP------GKEDNNKPGKEDNNK 373 Query: 236 RTGEAGDQALRAGDGRPPAERRLHGCGGVEEDPRRPGEE 352 E G++ + + +P E G +ED ++PG+E Sbjct: 374 PGKEDGNKPGKEDNKKPGKE---DGNKPGKEDNKKPGKE 409 Score = 27.3 bits (59), Expect = 9.4 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 2/102 (1%) Frame = +2 Query: 53 PGCNDXNRPAEEKKNAPCEKQEEEKGNPISNDEPLSRERSAPTFPCLGGTEE--RGGRNS 226 P D N+P +E N P K++ K N++P + + P G E+ + G+ Sbjct: 326 PKEEDNNKPGKEDNNKP-GKEDNNKPGKEDNNKPGKEDNNKP------GKEDNNKPGKED 378 Query: 227 WRLRTGEAGDQALRAGDGRPPAERRLHGCGGVEEDPRRPGEE 352 + G+ ++ DG P + G +ED +PG+E Sbjct: 379 GN-KPGKEDNKKPGKEDGNKPGKEDNKKPG--KEDGNKPGKE 417
>DNM3A_HUMAN (Q9Y6K1) DNA (cytosine-5)-methyltransferase 3A (EC 2.1.1.37)| (Dnmt3a) (DNA methyltransferase HsaIIIA) (DNA MTase HsaIIIA) (M.HsaIIIA) Length = 909 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/68 (27%), Positives = 30/68 (44%) Frame = +2 Query: 80 AEEKKNAPCEKQEEEKGNPISNDEPLSRERSAPTFPCLGGTEERGGRNSWRLRTGEAGDQ 259 A E+ P E Q+ E+ +P P ++ + P P + T E G ++ +AGD Sbjct: 223 AVEENQGPGESQKVEEASP-----PAVQQPTDPASPTVATTPEPVGSDAGDKNATKAGDD 277 Query: 260 ALRAGDGR 283 DGR Sbjct: 278 EPEYEDGR 285
>ROL6_CAEEL (P20784) Cuticle collagen rol-6 (Protein roller-6)| Length = 348 Score = 28.5 bits (62), Expect = 4.2 Identities = 29/123 (23%), Positives = 39/123 (31%), Gaps = 12/123 (9%) Frame = +2 Query: 26 PGRRRCTHMPG-CNDXNRPAEEKKNAPCEKQEEEKGNPISNDEPLSRERSA-------PT 181 PGR MPG C P + K + ++ P+ P A PT Sbjct: 222 PGRDGNPGMPGDCGPPGAPGSDGKPGSPGGKGDDGERPLGRPGPRGPPGEAGPEGPQGPT 281 Query: 182 ----FPCLGGTEERGGRNSWRLRTGEAGDQALRAGDGRPPAERRLHGCGGVEEDPRRPGE 349 +P G + G + GE G + G P + C G E D R Sbjct: 282 GRDAYPGQSGPQGEPGLQGYGGAAGEDGPEGPPGAPGLPGKDAEYCKCPGREGDAGRSAR 341 Query: 350 EHR 358 HR Sbjct: 342 RHR 344
>SVIL_HUMAN (O95425) Supervillin (Archvillin) (p205/p250)| Length = 2214 Score = 28.5 bits (62), Expect = 4.2 Identities = 22/59 (37%), Positives = 28/59 (47%) Frame = +2 Query: 119 EEKGNPISNDEPLSRERSAPTFPCLGGTEERGGRNSWRLRTGEAGDQALRAGDGRPPAE 295 E++G E SR+ S+ +P GTE G R GE+ D AL AGDG E Sbjct: 147 EKRGGKSDKQEESSRDASS-LYP---GTETMGLRTC----AGESKDYALHAGDGSSDPE 197
>CLPX_NEIMB (Q9JYY3) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 414 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +3 Query: 3 NYTXRRDXREGEDVHICRAAMXRIGPLKKRKTLPARSKKRKRGTQLVMTN 152 +Y R + G +V + ++ + IGP KTL A+S RK VM + Sbjct: 95 HYKRLRHPKAGANVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMAD 144
>EXBD1_XANCP (O34259) Biopolymer transport exbD1 protein| Length = 140 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +2 Query: 50 MPGCNDXNRPAEEKKNAPCEKQEEEKGNPISNDEPLSRE 166 +P N + EK+ AP +E G+ NDEP+S+E Sbjct: 46 LPEANLIQKEDAEKRAAPITLAVKEDGSLYWNDEPISKE 84
>HNRPL_HUMAN (P14866) Heterogeneous nuclear ribonucleoprotein L (hnRNP L)| Length = 558 Score = 28.1 bits (61), Expect = 5.5 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +2 Query: 194 GGTEERGGRNSWRLRTGEAGDQALRAGDGRPPAERRLHGCGGVE-EDPRR 340 GG+E GGR RL+T AGDQ G G A G GG +DP + Sbjct: 19 GGSE--GGRAPKRLKTDNAGDQHGGGGGGGGGAGAAGGGGGGENYDDPHK 66
>ORAI1_HUMAN (Q96D31) Protein orai-1| Length = 301 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = +2 Query: 167 RSAPTFPCLGGTEERGGRNSWRLRTGEAGDQALRAGDGRPP 289 RS+P P GG+ G R S R R+GDG PP Sbjct: 11 RSSPELPPSGGSTTSGSRRSRR-----------RSGDGEPP 40
>CDN1C_MOUSE (P49919) Cyclin-dependent kinase inhibitor 1C (Cyclin-dependent| kinase inhibitor p57) (p57KIP2) Length = 348 Score = 28.1 bits (61), Expect = 5.5 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 5/93 (5%) Frame = +2 Query: 77 PAEEKKNAPCEKQEE--EKGNPISNDEPLSRERSAPTFPCLGGTEERGGRNSWRLRTGEA 250 P EE+ P E+Q+E E+ D+PLS P GT + + R A Sbjct: 259 PVEEQNGEPVEEQDENQEQRGQELKDQPLSGIPGRPA----PGTAAANANDFFAKRKRTA 314 Query: 251 GDQALRAGDGRP---PAERRLHGCGGVEEDPRR 340 Q +A + P P+ G G VE+ PR+ Sbjct: 315 --QENKASNDVPPGCPSPNVAPGVGAVEQTPRK 345
>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 888 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 6/46 (13%) Frame = -1 Query: 302 GGVPPVGGHRQHGGP------DHRPHRYAASKNSCPLFPRYHRGRG 183 G + GGHR H GP HRPH + + P H RG Sbjct: 787 GNMGGSGGHRSHEGPGHGGPHGHRPHDVPSHRGHDHRGPPPHEHRG 832
>KPC1_NEUCR (P87253) Protein kinase C-like (EC 2.7.11.13)| Length = 1142 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -1 Query: 311 TRAGGVPPVGGHRQHGGPDHRPHRYAASK 225 ++AG +P GG +G PD R Y+A + Sbjct: 687 SQAGSIPDFGGSPGYGRPDSRDDEYSAQQ 715
>RNPA_THET8 (Q7X5K6) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 163 Score = 27.7 bits (60), Expect = 7.2 Identities = 26/89 (29%), Positives = 34/89 (38%), Gaps = 12/89 (13%) Frame = +2 Query: 74 RPAEEKKNAPCEKQEEEKGNPISNDEPLSR----------ERSAPTFPCLGG--TEERGG 217 +P E +N Q+E+ G P + P S E P P GG +G Sbjct: 9 QPQETGQNPRLSGQDEDPGRPEGAEAPPSEGALAPHARRSEAVGPKPPAPGGKLLSLKGD 68 Query: 218 RNSWRLRTGEAGDQALRAGDGRPPAERRL 304 R RLR G AG + P AE R+ Sbjct: 69 RAFQRLRKGRAGRGRYVSVKWLPAAELRV 97
>RNPA_THET2 (Q72LI2) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 163 Score = 27.7 bits (60), Expect = 7.2 Identities = 26/89 (29%), Positives = 34/89 (38%), Gaps = 12/89 (13%) Frame = +2 Query: 74 RPAEEKKNAPCEKQEEEKGNPISNDEPLSR----------ERSAPTFPCLGG--TEERGG 217 +P E +N Q+E+ G P + P S E P P GG +G Sbjct: 9 QPQETGQNPRLSGQDEDPGRPEGAEAPPSEGALAPHARRSEAVGPKPPAPGGKLLSLKGD 68 Query: 218 RNSWRLRTGEAGDQALRAGDGRPPAERRL 304 R RLR G AG + P AE R+ Sbjct: 69 RAFQRLRKGRAGRGRYVSVKWLPAAELRV 97
>MYPT1_MOUSE (Q9DBR7) Protein phosphatase 1 regulatory subunit 12A (Myosin| phosphatase-targeting subunit 1) (Myosin phosphatase target subunit 1) Length = 1004 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +2 Query: 29 GRRRCTHMPGCNDXNRPAEEKKNAPCEKQEEEKGNPISNDEPLSRERS 172 GR R T + + EEK+ EKQEE+K + S ++ ++ S Sbjct: 710 GRSRSTRTREQENEEKEKEEKEKQDKEKQEEKKESEASREDEYKQKYS 757
>NIA_EMENI (P22945) Nitrate reductase [NADPH] (EC 1.7.1.3) (NR)| Length = 873 Score = 27.7 bits (60), Expect = 7.2 Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 13/83 (15%) Frame = +2 Query: 107 EKQEEEK-----GNPISNDEPLSRERSAPTFPCLGGTEER--------GGRNSWRLRTGE 247 ++Q+E K GN + D L E F L G +E+ G SW R G Sbjct: 768 DEQDETKCVMLDGNRLEEDILLKNELDE--FEALAGKKEKCKIVHTLTKGSESWTGRRGR 825 Query: 248 AGDQALRAGDGRPPAERRLHGCG 316 ++ +R G P E + CG Sbjct: 826 IDEELIRQHAGTPDRETMVLVCG 848
>MYPT1_HUMAN (O14974) Protein phosphatase 1 regulatory subunit 12A (Myosin| phosphatase-targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit) Length = 1030 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +2 Query: 29 GRRRCTHMPGCNDXNRPAEEKKNAPCEKQEEEKGNPISNDEPLSRERS 172 GR R T + + EEK+ EKQEE+K + S ++ ++ S Sbjct: 712 GRSRSTRTREQENEEKEKEEKEKQDKEKQEEKKESETSREDEYKQKYS 759
>DNJB2_HUMAN (P25686) DnaJ homolog subfamily B member 2 (Heat shock 40 kDa| protein 3) (DnaJ protein homolog 1) (HSJ-1) Length = 351 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = -1 Query: 134 GSPFPLLASRRERFSFLQRADSXHCSPAYVYIFAFPG 24 G PF L FS LQ S H P + + +FPG Sbjct: 110 GDPFAELFDDLGPFSELQNRGSRHSGPFFTFSSSFPG 146
>IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34| (eIF-(iso)4F p82-34) Length = 788 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +2 Query: 26 PGRRRCTHMPGCNDXNRPAEEKKNAPCEKQEEEKGNPISNDEPL 157 PG R+ MPG ++ N + ++ P +G+P+ N PL Sbjct: 501 PGSRKMPGMPGLDNDNWEVQRSRSMP-------RGDPLRNQGPL 537
>IER5_HUMAN (Q5VY09) Immediate early response gene 5 protein| Length = 327 Score = 27.7 bits (60), Expect = 7.2 Identities = 29/119 (24%), Positives = 42/119 (35%), Gaps = 10/119 (8%) Frame = +2 Query: 26 PGRRRCTHMPGCNDXNRPAEEKKNAP---CEKQE-------EEKGNPISNDEPLSRERSA 175 PG T C RPAE++ AP C ++ G P PL + R Sbjct: 186 PGTPAATPRAACCCAPRPAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLKKPRRN 245 Query: 176 PTFPCLGGTEERGGRNSWRLRTGEAGDQALRAGDGRPPAERRLHGCGGVEEDPRRPGEE 352 P GG ++ ++ + TG + G R+ G G EE+ G E Sbjct: 246 LEQPPSGGEDD----DAEEMETGNVANLISIFGSSFSGLLRKSPGGGREEEEGEESGPE 300
>SOLI2_RALSO (O30920) Autoinducer synthesis protein solI| Length = 204 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +3 Query: 129 GTQLVMTNPCHESDQHLLSPASVVPRKEGAGILGGCVPVRPVIRPSVL 272 G QL M + E DQ+ V ++ G + GC + P RP +L Sbjct: 32 GWQLPMADGTFERDQYDRDDTVYVVARDEGGTICGCARLLPTTRPYLL 79
>RPA2_NEUCR (O74633) DNA-directed RNA polymerase I polypeptide 2 (EC 2.7.7.6)| (RNA polymerase I subunit 2) Length = 1234 Score = 27.3 bits (59), Expect = 9.4 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = +3 Query: 138 LVMTNPCHESDQHLLSPASVVPRKEGAGILGGCVPVRPVIRPSVLAMAAHRRN 296 +V +N CH + SPA +V RKE + LGG V I + + +RRN Sbjct: 158 MVKSNKCHLQNN---SPAQLVARKEESEELGGYFIVNG-IEKLIRMLLVNRRN 206
>I11RA_RAT (Q99MF4) Interleukin-11 receptor alpha chain precursor| (IL-11R-alpha) (IL-11RA) Length = 431 Score = 27.3 bits (59), Expect = 9.4 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 10/59 (16%) Frame = +3 Query: 174 HLLSPASVVPRKEGA-------GILGGCVPVR---PVIRPSVLAMAAHRRNAACTGAVG 320 H L A V R EG G+ GG V ++ P RP V A N +CT + G Sbjct: 77 HRLVLAQVDSRDEGTYVCRTLDGVFGGMVTLKLGSPPARPEVSCQAVDYENFSCTWSPG 135
>XE7_HUMAN (Q02040) B-lymphocyte antigen precursor (B-lymphocyte surface| antigen) (721P) (Protein XE7) Length = 695 Score = 27.3 bits (59), Expect = 9.4 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Frame = +2 Query: 83 EEKKNAPCEKQEEEKGNPISNDEPLSRERSAPTFPCLG-GTEERGGRNSWRLRTGEAGDQ 259 ++ K P +Q + + S + +RE S G G +R R R R + + Sbjct: 555 QQPKGIPACEQNVSRKDTRSEQDKCNREPSKGRGRATGDGLADRHKRERSRARRASSRE- 613 Query: 260 ALRAGDGRPPAERRLHGCGGVEED-PRR 340 DGRP ERR H ++D PRR Sbjct: 614 -----DGRPRKERRPHKKHAYKDDSPRR 636
>MYSC_ACACA (P10569) Myosin IC heavy chain| Length = 1168 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/19 (57%), Positives = 11/19 (57%) Frame = -1 Query: 302 GGVPPVGGHRQHGGPDHRP 246 GG PP GG R GGP P Sbjct: 1127 GGAPPPGGMRGRGGPGPAP 1145
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 6/46 (13%) Frame = -1 Query: 302 GGVPPVGGHRQHGGP------DHRPHRYAASKNSCPLFPRYHRGRG 183 G + GGHR H GP HRPH + P H RG Sbjct: 837 GSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRG 882
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 6/46 (13%) Frame = -1 Query: 302 GGVPPVGGHRQHGGP------DHRPHRYAASKNSCPLFPRYHRGRG 183 G + GGHR H GP HRPH + P H RG Sbjct: 837 GSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRG 882
>GSHB_YERPE (P58582) Glutathione synthetase (EC 6.3.2.3) (Glutathione synthase)| (GSH synthetase) (GSH-S) (GSHase) Length = 319 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/27 (44%), Positives = 13/27 (48%) Frame = +2 Query: 218 RNSWRLRTGEAGDQALRAGDGRPPAER 298 R W L E GD +R GDGR R Sbjct: 30 RRGWELHYMEMGDLYMRGGDGRARTRR 56
>SIAL_HUMAN (P21815) Bone sialoprotein-2 precursor (Bone sialoprotein II) (BSP| II) (Cell-binding sialoprotein) (Integrin-binding sialoprotein) Length = 317 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Frame = +2 Query: 65 DXNRPAEEKKNAPCEKQEEEKGNPISNDE-PLSRERSAPTFPCLGGTEERGGRNSWRLRT 241 D A ++K + E++EEE+GN E + TE G S + Sbjct: 138 DITNKATKEKESDEEEEEEEEGNENEESEAEVDENEQGINGTSTNSTEAENGNGSSGVDN 197 Query: 242 GEAGDQ 259 GE G++ Sbjct: 198 GEEGEE 203
>ATX3_MOUSE (Q9CVD2) Ataxin-3 (EC 3.4.22.-) (Machado-Joseph disease protein 1| homolog) Length = 355 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Frame = +2 Query: 32 RRRCTHMPGCNDXNRPAEE---KKNAPCEKQEEEKGNPISNDEPLSRERSAPTFPCLGGT 202 R C + P + + +EE ++ A EKQ++++ + PLS R PT G Sbjct: 262 RSMCENSPQTSSPDLSSEELRRRREAYFEKQQQQQ-QEVDRPGPLSYPRERPTTSSGGRR 320 Query: 203 EERGG 217 ++GG Sbjct: 321 SDQGG 325
>POLG_HCVJ8 (P26661) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3032 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = -2 Query: 352 FLTWAAGIFFYPTAPVQAAFRRWAAIASTEGLITGLTGTQPPRIPAP 212 F +W G+ + APV F R + T GL + + G+Q P P P Sbjct: 2124 FFSWVDGVQIHRFAPVPGPFFR-DEVTFTVGLNSFVVGSQLPCDPEP 2169
>ATPE_RHOPA (Q6NDD3) ATP synthase epsilon chain (EC 3.6.3.14) (ATP synthase F1| sector epsilon subunit) Length = 135 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = +3 Query: 198 VPRKEGA-GILGGCVPVRPVIRPSVLAMAA 284 +P EG G+L G PV VIRP +L + A Sbjct: 25 IPGAEGDFGVLAGHAPVVAVIRPGILTVTA 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,703,351 Number of Sequences: 219361 Number of extensions: 1199636 Number of successful extensions: 4593 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 4260 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4558 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
