| Clone Name | rbaal35c22 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | RK34_SPIOL (P82244) 50S ribosomal protein L34, chloroplast precu... | 64 | 3e-10 | 2 | TATB_RHIME (Q92Q24) Sec-independent protein translocase protein ... | 31 | 2.4 | 3 | EAF3_CANGA (Q6FN68) Chromatin modification-related protein EAF3 | 30 | 7.1 |
|---|
>RK34_SPIOL (P82244) 50S ribosomal protein L34, chloroplast precursor| Length = 152 Score = 64.3 bits (155), Expect = 3e-10 Identities = 35/71 (49%), Positives = 41/71 (57%) Frame = -1 Query: 330 LTTRRPRGLQIRAGKAALCLTKRSRSRKSLARVHGFXXXXXXXXXXXXXXXXXXXXXKIL 151 ++T R R +RAGKAALCLTKRSRSRKSLAR HGF KIL Sbjct: 79 VSTDRCRRFVVRAGKAALCLTKRSRSRKSLARTHGFRLRMSTTSGRALLKRRRAKGRKIL 138 Query: 150 CTKSNSPTGTK 118 CTK+N +G + Sbjct: 139 CTKTNPSSGKR 149
>TATB_RHIME (Q92Q24) Sec-independent protein translocase protein tatB homolog| Length = 215 Score = 31.2 bits (69), Expect = 2.4 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +2 Query: 458 MNELRRNG-EAEAPMGPALWGRRPPPIATAEILPEWSERDAIGEARANA 601 MN LR+ G E ++ + A RPP AT E L E DA+GE A A Sbjct: 82 MNPLRQLGNEIKSDLQKATTPDRPPASATPEPLVEPVNTDAVGETAAKA 130
>EAF3_CANGA (Q6FN68) Chromatin modification-related protein EAF3| Length = 355 Score = 29.6 bits (65), Expect = 7.1 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = +1 Query: 475 KRGGGGPHGASLMGAETAADSHRRDPPGVER 567 KRGGGG H S G + RRD ER Sbjct: 113 KRGGGGAHSESNHGGRRSGSGDRRDSNAEER 143 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,813,884 Number of Sequences: 219361 Number of extensions: 1276165 Number of successful extensions: 3536 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3343 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3534 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)