ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal35c10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase p... 135 8e-32
2PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.... 135 8e-32
3PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (... 127 3e-29
4NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase ... 40 0.008
5A4GAT_MOUSE (Q67BJ4) Lactosylceramide 4-alpha-galactosyltransfer... 30 7.8
6A4GAT_RAT (Q9JI93) Lactosylceramide 4-alpha-galactosyltransferas... 30 7.8
7PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6... 30 7.8
8PLCB3_MOUSE (P51432) 1-phosphatidylinositol-4,5-bisphosphate pho... 30 7.8

>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC|
           3.1.3.2) (PAP)
          Length = 469

 Score =  135 bits (341), Expect = 8e-32
 Identities = 60/102 (58%), Positives = 75/102 (73%)
 Frame = -2

Query: 632 VHAYERSYRISNVNYNITSGNRYPVPDKSAPVYITVGDGGNQEGLASRFNDPQPDYSAFR 453
           VHAYERS R+SN+ YNI +G   P+ D+SAP+YIT+GDGGN EGL +    PQP YSAFR
Sbjct: 357 VHAYERSERVSNIAYNIVNGLCEPISDESAPIYITIGDGGNSEGLLTDMMQPQPKYSAFR 416

Query: 452 EASYGHSTLQLMNRTHAVYQWNRNDDGKHVPTDNVVFHNQYW 327
           EAS+GH  L++ NRTHA + WNRN DG  V  D+V   N++W
Sbjct: 417 EASFGHGLLEIKNRTHAYFSWNRNQDGNAVAADSVWLLNRFW 458



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>PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.2)|
           (Manganese(II) purple acid phosphatase)
          Length = 464

 Score =  135 bits (341), Expect = 8e-32
 Identities = 63/102 (61%), Positives = 75/102 (73%)
 Frame = -2

Query: 632 VHAYERSYRISNVNYNITSGNRYPVPDKSAPVYITVGDGGNQEGLASRFNDPQPDYSAFR 453
           VHAYERS R+SNV YNI +G   PV DKSAPVYIT+GDGG  EGLA+   +PQP YSAFR
Sbjct: 351 VHAYERSERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGLATNMTEPQPKYSAFR 410

Query: 452 EASYGHSTLQLMNRTHAVYQWNRNDDGKHVPTDNVVFHNQYW 327
           EAS+GH+   + NRTHA Y W+RN DG  V  D++   N+YW
Sbjct: 411 EASFGHAIFDITNRTHAHYSWHRNQDGVAVEADSLWSFNRYW 452



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>PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (EC 3.1.3.2)|
           (PAP)
          Length = 432

 Score =  127 bits (319), Expect = 3e-29
 Identities = 59/102 (57%), Positives = 71/102 (69%)
 Frame = -2

Query: 632 VHAYERSYRISNVNYNITSGNRYPVPDKSAPVYITVGDGGNQEGLASRFNDPQPDYSAFR 453
           VHAYERS R+SN+ Y IT G   PV D+SAPVYIT+GD GN   + S    PQP+YSAFR
Sbjct: 324 VHAYERSERVSNIAYKITDGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFR 383

Query: 452 EASYGHSTLQLMNRTHAVYQWNRNDDGKHVPTDNVVFHNQYW 327
           EAS+GH    + NRTHA + WNRN DG  V  D+V F N++W
Sbjct: 384 EASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHW 425



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>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)|
           (Fragments)
          Length = 368

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
 Frame = -2

Query: 632 VHAYERS---YRISNVNYNIT--SGNRYPVPDKSAPVYITVGDGGNQEGLASRFNDPQPD 468
           VH YER+   Y+   VN + T  SG        +  +++  G GG+     S +    P 
Sbjct: 256 VHNYERTCPLYQSQCVNADKTHYSGTM------NGTIFVVAGGGGSH---LSSYTTAIPK 306

Query: 467 YSAFREASYGHSTLQLMNRTHAVYQWNRNDDGKHVPTDNVVFHNQY 330
           +S FR+  YG + L   N +  ++++ ++ DGK    D+   H  Y
Sbjct: 307 WSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGK--VYDSFTIHRDY 350



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>A4GAT_MOUSE (Q67BJ4) Lactosylceramide 4-alpha-galactosyltransferase (EC|
           2.4.1.228) (Alpha-1,4-galactosyltransferase)
           (UDP-galactose:beta-D-galactosyl-beta1-R
           4-alpha-D-galactosyltransferase)
           (Alpha-1,4-N-acetylglucosaminyltransferase)
           (Alpha4Gal-T1) (Glo
          Length = 359

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 479 PQPDYSAFREASYGHSTLQLMNRTHAVYQWNRNDDGKHV 363
           P  ++  + E        QL+N T+AV+ WN+   G H+
Sbjct: 294 PWQNWKKYFEDISPEELTQLLNATYAVHVWNKKSQGTHL 332



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>A4GAT_RAT (Q9JI93) Lactosylceramide 4-alpha-galactosyltransferase (EC|
           2.4.1.228) (Alpha-1,4-galactosyltransferase)
           (UDP-galactose:beta-D-galactosyl-beta1-R
           4-alpha-D-galactosyltransferase)
           (Alpha-1,4-N-acetylglucosaminyltransferase)
           (Alpha4Gal-T1) (Globo
          Length = 360

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 479 PQPDYSAFREASYGHSTLQLMNRTHAVYQWNRNDDGKHV 363
           P  ++  + E        QL+N T+AV+ WN+   G H+
Sbjct: 295 PWQNWKKYFEDVSPEELAQLLNATYAVHVWNKKSQGTHL 333



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>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid|
           phosphatase) (APase6)
          Length = 614

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
 Frame = -2

Query: 632 VHAYERSYRI-SNVNYN---ITSGNRYPVPDKSAPVYITVGDGGNQEGLASRFNDPQ--P 471
           +H YER Y + +N   +   I + N Y   +  +  +I  G  GN E   S F+D +   
Sbjct: 500 IHWYERLYPLGANGTIDTAAIVNNNTYYAHNGKSITHIINGMAGNIES-HSEFSDGEGLT 558

Query: 470 DYSAFRE-ASYGHSTLQLMNRTHAVYQWNRNDDG 372
           + +A  +   YG S L + N T   ++  R DDG
Sbjct: 559 NITALLDKVHYGFSKLTIFNETALKWELIRGDDG 592



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>PLCB3_MOUSE (P51432) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase|
           beta 3 (EC 3.1.4.11) (Phosphoinositide phospholipase C)
           (Phospholipase C-beta-3) (PLC-beta-3)
          Length = 1234

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +1

Query: 490 LEASPSWLPPSPTVMYTGADLSGTGYR 570
           L+ASP W PP PT   T + LS  G R
Sbjct: 914 LDASPRW-PPGPTTSSTSSSLSSPGQR 939


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,855,793
Number of Sequences: 219361
Number of extensions: 1436875
Number of successful extensions: 4099
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4099
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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