| Clone Name | rbaal34n08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467076.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 361 bits (182), Expect = 2e-96 Identities = 339/390 (86%), Gaps = 1/390 (0%) Strand = Plus / Minus Query: 297 tttaatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacaga 356 |||||||||| || || ||||| || || ||||||||||||||||||||||| || |||| Sbjct: 1182 tttaatcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcaga 1123 Query: 357 ggcacgtggggcacatcacctttcctgcaccagagcaatttggacatctctcggtttttg 416 | || || || ||||||||||||||||| || || |||||||| || ||||| ||| ||| Sbjct: 1122 gacatgttggacacatcacctttcctgcgcctgaacaatttgggcacctctctgttcttg 1063 Query: 417 gtgctgataaaggttgatcaccatcactgaatgtcgaaacaggctcagtaagcacaacag 476 | | |||||||| ||||||||||| |||||||| ||||| || ||||||||||| | || Sbjct: 1062 gcgtagataaaggctgatcaccatcgctgaatgttgaaaccggttcagtaagcaccagag 1003 Query: 477 ctcccgtgcttgaacagcgggcacaagccagatacccagttcctaaacaatacttgcacc 536 ||| || ||||||||||| ||||| ||||| || ||||||||||||||||| ||||||| Sbjct: 1002 ttccggtacttgaacagcgagcacaggccaggtatccagttcctaaacaatatttgcacc 943 Query: 537 gtttatgctcctgttgcttgacattgtttatctcaacaaccattaggggcggagataact 596 | ||||||||||| || ||||||||||| |||||||||||||||| | |||||||||||| Sbjct: 942 gcttatgctcctgctgtttgacattgttgatctcaacaaccatta-gagcggagataact 884 Query: 597 ccgactgctccacctgagaaggatgccacaataggatctacctggctcagttgcataggc 656 || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 883 ccaactgctccacctgagaacgatgccacaataggatctacctgactcagttgcatcggc 824 Query: 657 aaatgaacatttcggatgaaatctgcataa 686 ||||| ||| | |||||||| ||||||||| Sbjct: 823 aaatggacactgcggatgaagtctgcataa 794
>dbj|AK099767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095B06, full insert sequence Length = 1437 Score = 361 bits (182), Expect = 2e-96 Identities = 339/390 (86%), Gaps = 1/390 (0%) Strand = Plus / Minus Query: 297 tttaatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacaga 356 |||||||||| || || ||||| || || ||||||||||||||||||||||| || |||| Sbjct: 1182 tttaatcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcaga 1123 Query: 357 ggcacgtggggcacatcacctttcctgcaccagagcaatttggacatctctcggtttttg 416 | || || || ||||||||||||||||| || || |||||||| || ||||| ||| ||| Sbjct: 1122 gacatgttggacacatcacctttcctgcgcctgaacaatttgggcacctctctgttcttg 1063 Query: 417 gtgctgataaaggttgatcaccatcactgaatgtcgaaacaggctcagtaagcacaacag 476 | | |||||||| ||||||||||| |||||||| ||||| || ||||||||||| | || Sbjct: 1062 gcgtagataaaggctgatcaccatcgctgaatgttgaaaccggttcagtaagcaccagag 1003 Query: 477 ctcccgtgcttgaacagcgggcacaagccagatacccagttcctaaacaatacttgcacc 536 ||| || ||||||||||| ||||| ||||| || ||||||||||||||||| ||||||| Sbjct: 1002 ttccggtacttgaacagcgagcacaggccaggtatccagttcctaaacaatatttgcacc 943 Query: 537 gtttatgctcctgttgcttgacattgtttatctcaacaaccattaggggcggagataact 596 | ||||||||||| || ||||||||||| |||||||||||||||| | |||||||||||| Sbjct: 942 gcttatgctcctgctgtttgacattgttgatctcaacaaccatta-gagcggagataact 884 Query: 597 ccgactgctccacctgagaaggatgccacaataggatctacctggctcagttgcataggc 656 || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 883 ccaactgctccacctgagaacgatgccacaataggatctacctgactcagttgcatcggc 824 Query: 657 aaatgaacatttcggatgaaatctgcataa 686 ||||| ||| | |||||||| ||||||||| Sbjct: 823 aaatggacactgcggatgaagtctgcataa 794
>dbj|AK061454.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G08, full insert sequence Length = 1153 Score = 361 bits (182), Expect = 2e-96 Identities = 339/390 (86%), Gaps = 1/390 (0%) Strand = Plus / Minus Query: 297 tttaatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacaga 356 |||||||||| || || ||||| || || ||||||||||||||||||||||| || |||| Sbjct: 897 tttaatcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcaga 838 Query: 357 ggcacgtggggcacatcacctttcctgcaccagagcaatttggacatctctcggtttttg 416 | || || || ||||||||||||||||| || || |||||||| || ||||| ||| ||| Sbjct: 837 gacatgttggacacatcacctttcctgcgcctgaacaatttgggcacctctctgttcttg 778 Query: 417 gtgctgataaaggttgatcaccatcactgaatgtcgaaacaggctcagtaagcacaacag 476 | | |||||||| ||||||||||| |||||||| ||||| || ||||||||||| | || Sbjct: 777 gcgtagataaaggctgatcaccatcgctgaatgttgaaaccggttcagtaagcaccagag 718 Query: 477 ctcccgtgcttgaacagcgggcacaagccagatacccagttcctaaacaatacttgcacc 536 ||| || ||||||||||| ||||| ||||| || ||||||||||||||||| ||||||| Sbjct: 717 ttccggtacttgaacagcgagcacaggccaggtatccagttcctaaacaatatttgcacc 658 Query: 537 gtttatgctcctgttgcttgacattgtttatctcaacaaccattaggggcggagataact 596 | ||||||||||| || ||||||||||| |||||||||||||||| | |||||||||||| Sbjct: 657 gcttatgctcctgctgtttgacattgttgatctcaacaaccatta-gagcggagataact 599 Query: 597 ccgactgctccacctgagaaggatgccacaataggatctacctggctcagttgcataggc 656 || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 598 ccaactgctccacctgagaacgatgccacaataggatctacctgactcagttgcatcggc 539 Query: 657 aaatgaacatttcggatgaaatctgcataa 686 ||||| ||| | |||||||| ||||||||| Sbjct: 538 aaatggacactgcggatgaagtctgcataa 509
>dbj|AK058796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-H08, full insert sequence Length = 1024 Score = 345 bits (174), Expect = 1e-91 Identities = 337/390 (86%), Gaps = 1/390 (0%) Strand = Plus / Minus Query: 297 tttaatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacaga 356 |||||||||| || || ||||| || || ||||||||||||||||||||||| || |||| Sbjct: 553 tttaatcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcaga 494 Query: 357 ggcacgtggggcacatcacctttcctgcaccagagcaatttggacatctctcggtttttg 416 | || || || ||||||||||||||||| || || |||||||| || ||||| ||| ||| Sbjct: 493 gacatgttggacacatcacctttcctgcgcctgaacaatttgggcacctctctgttcttg 434 Query: 417 gtgctgataaaggttgatcaccatcactgaatgtcgaaacaggctcagtaagcacaacag 476 | | |||||||| ||||||||||| |||||||| ||||| || ||||||||||| | || Sbjct: 433 gcgtagataaaggctgatcaccatcgctgaatgttgaaaccggttcagtaagcaccagag 374 Query: 477 ctcccgtgcttgaacagcgggcacaagccagatacccagttcctaaacaatacttgcacc 536 ||| ||||||||||| ||||| ||||| || ||||||||||||||||| ||||||| Sbjct: 373 ttcctaaacttgaacagcgagcacaggccaggtatccagttcctaaacaatatttgcacc 314 Query: 537 gtttatgctcctgttgcttgacattgtttatctcaacaaccattaggggcggagataact 596 | ||||||||||| || ||||||||||| ||||||||||||||||| | ||||||||||| Sbjct: 313 gcttatgctcctgctgtttgacattgttgatctcaacaaccattagag-cggagataact 255 Query: 597 ccgactgctccacctgagaaggatgccacaataggatctacctggctcagttgcataggc 656 || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 254 ccaactgctccacctgagaacgatgccacaataggatctacctgactcagttgcatcggc 195 Query: 657 aaatgaacatttcggatgaaatctgcataa 686 ||||| ||| | |||||||| ||||||||| Sbjct: 194 aaatggacactgcggatgaagtctgcataa 165
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 176 bits (89), Expect = 6e-41 Identities = 120/129 (93%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 512 ccagttcctaaacaatacttgcaccgtttatgctcctgttgcttgacattgtttatctca 571 ||||||||||||||||| |||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 26268171 ccagttcctaaacaatatttgcaccgcttatgctcctgctgtttgacattgttgatctca 26268230 Query: 572 acaaccattaggggcggagataactccgactgctccacctgagaaggatgccacaatagg 631 |||||||||| | |||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 26268231 acaaccatta-gagcggagataactccaactgctccacctgagaacgatgccacaatagg 26268289 Query: 632 atctacctg 640 ||||||||| Sbjct: 26268290 atctacctg 26268298 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Plus Query: 374 acctttcctgcaccagagcaatttggacatctctcggtttttggtgctgataaaggttga 433 ||||||||||| || || |||||||| || ||||| ||| |||| | |||||||| ||| Sbjct: 26267587 acctttcctgcgcctgaacaatttgggcacctctctgttcttggcgtagataaaggctga 26267646 Query: 434 tcaccatcactgaatgtcgaaacaggctcagtaagcacaacagctcccgtgcttgaacag 493 |||||||| |||||||| ||||| || ||||||||||| | || ||| || ||||||||| Sbjct: 26267647 tcaccatcgctgaatgttgaaaccggttcagtaagcaccagagttccggtacttgaacag 26267706 Query: 494 cgggcacaagccag 507 || ||||| ||||| Sbjct: 26267707 cgagcacaggccag 26267720 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 297 tttaatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacaga 356 |||||||||| || || ||||| || || ||||||||||||||||||||||| || |||| Sbjct: 26267391 tttaatcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcaga 26267450 Query: 357 ggcacgtggggcacatcacct 377 | || || || |||||||||| Sbjct: 26267451 gacatgttggacacatcacct 26267471 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 600 actgctccacctgagaaggatgccacaataggatctacctg 640 ||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 19735477 actgcaccacctgaaaaggatgccacaatgggatctacctg 19735517 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 642 ctcagttgcataggcaaatgaacatttcggatgaaatctgcataa 686 ||||||||||| |||||||| ||| | |||||||| ||||||||| Sbjct: 26268419 ctcagttgcatcggcaaatggacactgcggatgaagtctgcataa 26268463 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Plus Query: 323 tcatgctcacttgccattgccatccctgtacagaggcacgtggggcacatcacct 377 |||||||| |||||||||||| | ||||| || | ||| || ||||||||||||| Sbjct: 19734620 tcatgctcgcttgccattgccgttcctgtgcacaagcaagttgggcacatcacct 19734674
>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:P0491E01 Length = 136150 Score = 176 bits (89), Expect = 6e-41 Identities = 120/129 (93%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 512 ccagttcctaaacaatacttgcaccgtttatgctcctgttgcttgacattgtttatctca 571 ||||||||||||||||| |||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 523 ccagttcctaaacaatatttgcaccgcttatgctcctgctgtttgacattgttgatctca 582 Query: 572 acaaccattaggggcggagataactccgactgctccacctgagaaggatgccacaatagg 631 |||||||||| | |||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 583 acaaccatta-gagcggagataactccaactgctccacctgagaacgatgccacaatagg 641 Query: 632 atctacctg 640 ||||||||| Sbjct: 642 atctacctg 650 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 436 accatcactgaatgtcgaaacaggctcagtaagcacaacagctcccgtgcttgaacagcg 495 |||||| |||||||| ||||| || ||||||||||| | || ||| || ||||||||||| Sbjct: 1 accatcgctgaatgttgaaaccggttcagtaagcaccagagttccggtacttgaacagcg 60 Query: 496 ggcacaagccag 507 ||||| ||||| Sbjct: 61 agcacaggccag 72 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 642 ctcagttgcataggcaaatgaacatttcggatgaaatctgcataa 686 ||||||||||| |||||||| ||| | |||||||| ||||||||| Sbjct: 771 ctcagttgcatcggcaaatggacactgcggatgaagtctgcataa 815
>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0012J10 Length = 132375 Score = 176 bits (89), Expect = 6e-41 Identities = 120/129 (93%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 512 ccagttcctaaacaatacttgcaccgtttatgctcctgttgcttgacattgtttatctca 571 ||||||||||||||||| |||||||| ||||||||||| || ||||||||||| |||||| Sbjct: 91012 ccagttcctaaacaatatttgcaccgcttatgctcctgctgtttgacattgttgatctca 91071 Query: 572 acaaccattaggggcggagataactccgactgctccacctgagaaggatgccacaatagg 631 |||||||||| | |||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 91072 acaaccatta-gagcggagataactccaactgctccacctgagaacgatgccacaatagg 91130 Query: 632 atctacctg 640 ||||||||| Sbjct: 91131 atctacctg 91139 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Plus Query: 374 acctttcctgcaccagagcaatttggacatctctcggtttttggtgctgataaaggttga 433 ||||||||||| || || |||||||| || ||||| ||| |||| | |||||||| ||| Sbjct: 90428 acctttcctgcgcctgaacaatttgggcacctctctgttcttggcgtagataaaggctga 90487 Query: 434 tcaccatcactgaatgtcgaaacaggctcagtaagcacaacagctcccgtgcttgaacag 493 |||||||| |||||||| ||||| || ||||||||||| | || ||| || ||||||||| Sbjct: 90488 tcaccatcgctgaatgttgaaaccggttcagtaagcaccagagttccggtacttgaacag 90547 Query: 494 cgggcacaagccag 507 || ||||| ||||| Sbjct: 90548 cgagcacaggccag 90561 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 297 tttaatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacaga 356 |||||||||| || || ||||| || || ||||||||||||||||||||||| || |||| Sbjct: 90232 tttaatcaaacggatcaattcgagggtcgtgctcacttgccattgccatccccgtgcaga 90291 Query: 357 ggcacgtggggcacatcacct 377 | || || || |||||||||| Sbjct: 90292 gacatgttggacacatcacct 90312 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 642 ctcagttgcataggcaaatgaacatttcggatgaaatctgcataa 686 ||||||||||| |||||||| ||| | |||||||| ||||||||| Sbjct: 91260 ctcagttgcatcggcaaatggacactgcggatgaagtctgcataa 91304
>gb|BT013273.1| Lycopersicon esculentum clone 134850R, mRNA sequence Length = 1142 Score = 119 bits (60), Expect = 1e-23 Identities = 283/356 (79%), Gaps = 1/356 (0%) Strand = Plus / Minus Query: 297 tttaatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacaga 356 ||||||||||||| || ||||| ||||| || ||||||||||| |||||||| ||||| | Sbjct: 999 tttaatcaaatggatcaattcgtggatcgtgttcacttgccatagccatcccagtacaaa 940 Query: 357 ggcacgtggggcacatcacctttcctgcaccagagcaatttggacatctctcggtttttg 416 | ||||| |||||||| |||||||||| ||| || || || | ||| ||||| ||||| | Sbjct: 939 gacacgtagggcacatgacctttcctgaacctgaacagttggaacacctctctgttttag 880 Query: 417 gtgctgataaaggttgatcaccatcactgaatgtcgaaacaggctcagtaagcacaacag 476 ||| ||| | ||| | || || || | ||| |||||||||||| |||| |||| || Sbjct: 879 gtggtgacagaggcttgtccgcaccataaattgttgaaacaggctcaataagaacaagag 820 Query: 477 ctcccgtgcttgaacagcgggcacaagccagatacccagttcctaaacaatacttgcacc 536 ||| ||| | ||||| || |||||||| ||||| || ||||| | ||| |||||||| | Sbjct: 819 atccagtgttggaacatcgagcacaagcaagatatcctgttccaagacagtacttgcatc 760 Query: 537 gtttatgctcctgttgcttgacattgtttatctcaacaaccattaggggcggagataact 596 ||||||||||| || || ||||| || || ||||||||||| | || ||||| || Sbjct: 759 tcttatgctcctgctgtttcacattattaatttcaacaaccatca-aagcagagatcacc 701 Query: 597 ccgactgctccacctgagaaggatgccacaataggatctacctggctcagttgcat 652 || ||||| || || ||||| ||||||||||| ||||| ||||| ||||||||||| Sbjct: 700 ccaactgcacccccagagaatgatgccacaattggatcgacctgactcagttgcat 645
>emb|BX831630.1|CNS09ZP5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZE04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1380 Score = 93.7 bits (47), Expect = 7e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 308 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 367 |||||||| || |||||||||||||| ||||| ||||| |||||||| || || || ||| Sbjct: 930 gggtcgatacgaggatcatgctcactggccatagccattcctgtacacagacatgtcggg 871 Query: 368 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 414 |||||||||||||| ||||| || || |||| |||||| |||||||| Sbjct: 870 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 824
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 87.7 bits (44), Expect = 5e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 374 acctttcctgcaccagagcaatttggacatctctcggtttttggtgctgataaaggttga 433 |||||||||||||| || |||||||| || |||| ||| |||| | |||||||| ||| Sbjct: 11714043 acctttcctgcacccgaacaatttgggcacgtctctgttcttggcgtagataaaggctga 11713984 Query: 434 tcaccatcactgaatgtcgaaacaggctcagtaagcacaacagctcccgtgcttgaacag 493 |||||||| |||||||| ||||| || ||||||||||| | || ||| || ||||||||| Sbjct: 11713983 tcaccatcgctgaatgttgaaaccggttcagtaagcaccagagttccggtacttgaacag 11713924 Query: 494 cgggcaca 501 || ||||| Sbjct: 11713923 cgagcaca 11713916
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 87.7 bits (44), Expect = 5e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 374 acctttcctgcaccagagcaatttggacatctctcggtttttggtgctgataaaggttga 433 |||||||||||||| || |||||||| || |||| ||| |||| | |||||||| ||| Sbjct: 148677 acctttcctgcacccgaacaatttgggcacgtctctgttcttggcgtagataaaggctga 148618 Query: 434 tcaccatcactgaatgtcgaaacaggctcagtaagcacaacagctcccgtgcttgaacag 493 |||||||| |||||||| ||||| || ||||||||||| | || ||| || ||||||||| Sbjct: 148617 tcaccatcgctgaatgttgaaaccggttcagtaagcaccagagttccggtacttgaacag 148558 Query: 494 cgggcaca 501 || ||||| Sbjct: 148557 cgagcaca 148550
>ref|NM_203246.1| Arabidopsis thaliana unknown protein AT5G61670 transcript variant AT5G61670.2 mRNA, complete cds Length = 1452 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 308 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 367 |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || ||| Sbjct: 962 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 903 Query: 368 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 414 |||||||||||||| ||||| || || |||| |||||| |||||||| Sbjct: 902 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 856
>ref|NM_125561.2| Arabidopsis thaliana unknown protein AT5G61670 transcript variant AT5G61670.1 mRNA, complete cds Length = 1162 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 308 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 367 |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || ||| Sbjct: 1005 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 946 Query: 368 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 414 |||||||||||||| ||||| || || |||| |||||| |||||||| Sbjct: 945 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 899
>gb|AY149953.1| Arabidopsis thaliana At5g61670/k11j9_190 mRNA, complete cds Length = 924 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 308 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 367 |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || ||| Sbjct: 914 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 855 Query: 368 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 414 |||||||||||||| ||||| || || |||| |||||| |||||||| Sbjct: 854 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 808
>gb|AY117226.1| Arabidopsis thaliana unknown protein (At5g61670) mRNA, complete cds Length = 955 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 308 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 367 |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || ||| Sbjct: 914 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 855 Query: 368 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 414 |||||||||||||| ||||| || || |||| |||||| |||||||| Sbjct: 854 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 808
>gb|AY065401.1| Arabidopsis thaliana unknown protein (At5g61670) mRNA, complete cds Length = 1122 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 308 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 367 |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || ||| Sbjct: 959 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 900 Query: 368 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 414 |||||||||||||| ||||| || || |||| |||||| |||||||| Sbjct: 899 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 853
>gb|AY094431.1| Arabidopsis thaliana AT5g61670/k11j9_190 mRNA, complete cds Length = 1100 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 308 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 367 |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || ||| Sbjct: 953 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 894 Query: 368 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 414 |||||||||||||| ||||| || || |||| |||||| |||||||| Sbjct: 893 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 847
>emb|BX832020.1|CNS09ZU3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH47ZA04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1351 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 308 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 367 |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || ||| Sbjct: 1230 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 1171 Query: 368 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 414 |||||||||||||| ||||| || || |||| |||||| |||||||| Sbjct: 1170 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 1124
>emb|BX832296.1|CNS09ZK0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1098 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 308 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 367 |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || ||| Sbjct: 1006 gggtcgatacgaggatcatgctcactggccatagccattcctgttcacagacatgtcggg 947 Query: 368 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 414 |||||||||||||| ||||| || || |||| |||||| |||||||| Sbjct: 946 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 900
>emb|BX832200.1|CNS09ZMR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1452 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 308 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 367 |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || ||| Sbjct: 962 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 903 Query: 368 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 414 |||||||||||||| ||||| || || |||| |||||| |||||||| Sbjct: 902 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 856
>emb|BX831353.1|CNS09ZDZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS80ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1174 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 308 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 367 |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || ||| Sbjct: 1088 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 1029 Query: 368 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 414 |||||||||||||| ||||| || || |||| |||||| |||||||| Sbjct: 1028 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 982
>gb|AY084568.1| Arabidopsis thaliana clone 112078 mRNA, complete sequence Length = 1118 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 308 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 367 |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || ||| Sbjct: 960 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 901 Query: 368 cacatcacctttcctgcaccagagcaatttggacatctctcggtttt 414 |||||||||||||| ||||| || || |||| |||||| |||||||| Sbjct: 900 cacatcacctttccggcacctgaacagtttgaacatctttcggtttt 854
>gb|AY110955.1| Zea mays CL31997_1 mRNA sequence Length = 855 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 299 taatcaaatgggtcgattcggggatcatgctcacttgccattgccatccctgtacagagg 358 |||||||| ||||| || || |||||||||||||||||||| ||||| ||||| || | | Sbjct: 176 taatcaaaagggtcaatccgtggatcatgctcacttgccatcgccattcctgtgcacaag 235 Query: 359 cacgtggggcacatcacctttcctgcaccagagcaatt 396 ||||| || |||||||||||||| || ||||| ||||| Sbjct: 236 cacgtcggacacatcacctttccagctccagaacaatt 273 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 588 gagataactccgactgctccacctgagaaggatgccacaataggatctacctggctca 645 |||||||| || ||||| |||||||| || |||||||| |||||||||||||| |||| Sbjct: 452 gagataacaccaactgcgccacctgaaaatgatgccactataggatctacctgactca 509
>dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11J9 Length = 69142 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 308 gggtcgattcggggatcatgctcacttgccattgccatccctgtacagaggcacgtgggg 367 |||||||| || |||||||||||||| ||||| ||||| ||||| || || || || ||| Sbjct: 59766 gggtcgatacgaggatcatgctcactggccatagccattcctgtgcacagacatgtcggg 59707 Query: 368 cacatcacct 377 |||||||||| Sbjct: 59706 cacatcacct 59697
>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G07 Length = 149119 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 600 actgctccacctgagaaggatgccacaataggatctacctg 640 ||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 44028 actgcaccacctgaaaaggatgccacaatgggatctacctg 44068 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Plus Query: 323 tcatgctcacttgccattgccatccctgtacagaggcacgtggggcacatcacct 377 |||||||| |||||||||||| | ||||| || | ||| || ||||||||||||| Sbjct: 43171 tcatgctcgcttgccattgccgttcctgtgcacaagcaagttgggcacatcacct 43225
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1136H02 Length = 145086 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 600 actgctccacctgagaaggatgccacaataggatctacctg 640 ||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 92235 actgcaccacctgaaaaggatgccacaatgggatctacctg 92275 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Plus Query: 323 tcatgctcacttgccattgccatccctgtacagaggcacgtggggcacatcacct 377 |||||||| |||||||||||| | ||||| || | ||| || ||||||||||||| Sbjct: 91378 tcatgctcgcttgccattgccgttcctgtgcacaagcaagttgggcacatcacct 91432
>dbj|AK073974.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073K01, full insert sequence Length = 1359 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 600 actgctccacctgagaaggatgccacaataggatctacctg 640 ||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 712 actgcaccacctgaaaaggatgccacaatgggatctacctg 672 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 323 tcatgctcacttgccattgccatccctgtacagaggcacgtggggcacatcacctttcc 381 |||||||| |||||||||||| | ||||| || | ||| || ||||||||||||||||| Sbjct: 985 tcatgctcgcttgccattgccgttcctgtgcacaagcaagttgggcacatcacctttcc 927
>dbj|AK067439.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100E03, full insert sequence Length = 1166 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 600 actgctccacctgagaaggatgccacaataggatctacctg 640 ||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 671 actgcaccacctgaaaaggatgccacaatgggatctacctg 631 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 323 tcatgctcacttgccattgccatccctgtacagaggcacgtggggcacatcacctttcc 381 |||||||| |||||||||||| | ||||| || | ||| || ||||||||||||||||| Sbjct: 944 tcatgctcgcttgccattgccgttcctgtgcacaagcaagttgggcacatcacctttcc 886
>ref|NM_120695.3| Arabidopsis thaliana unknown protein AT5G06130 transcript variant AT5G06130.2 mRNA, complete cds Length = 1362 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 368 cacatcacctttcctgcaccagagcaatttggacatct 405 ||||||||||||||||| || || |||||| ||||||| Sbjct: 987 cacatcacctttcctgcgccggaacaatttagacatct 950 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 618 gatgccacaataggatctacctggct 643 ||||||||||| |||||||||||||| Sbjct: 738 gatgccacaattggatctacctggct 713
>ref|NM_180700.2| Arabidopsis thaliana unknown protein AT5G06130 transcript variant AT5G06130.1 mRNA, complete cds Length = 1576 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 368 cacatcacctttcctgcaccagagcaatttggacatct 405 ||||||||||||||||| || || |||||| ||||||| Sbjct: 1201 cacatcacctttcctgcgccggaacaatttagacatct 1164 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 618 gatgccacaataggatctacctggct 643 ||||||||||| |||||||||||||| Sbjct: 952 gatgccacaattggatctacctggct 927
>gb|AY133750.1| Arabidopsis thaliana clone U19942 unknown protein (At5g06130) mRNA, complete cds Length = 979 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 368 cacatcacctttcctgcaccagagcaatttggacatct 405 ||||||||||||||||| || || |||||| ||||||| Sbjct: 878 cacatcacctttcctgcgccggaacaatttagacatct 841 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 618 gatgccacaataggatctacctggct 643 ||||||||||| |||||||||||||| Sbjct: 629 gatgccacaattggatctacctggct 604
>gb|AY072147.1| Arabidopsis thaliana unknown protein (At5g06130) mRNA, complete cds Length = 1224 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 368 cacatcacctttcctgcaccagagcaatttggacatct 405 ||||||||||||||||| || || |||||| ||||||| Sbjct: 919 cacatcacctttcctgcgccggaacaatttagacatct 882 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 618 gatgccacaataggatctacctggct 643 ||||||||||| |||||||||||||| Sbjct: 670 gatgccacaattggatctacctggct 645
>gb|AC025771.6| Homo sapiens chromosome 5 clone CTD-2203L19, complete sequence Length = 134286 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 caaggtatactacacactgaca 55 |||||||||||||||||||||| Sbjct: 81428 caaggtatactacacactgaca 81449
>gb|AC024589.5| Homo sapiens chromosome 5 clone RP11-42L13, complete sequence Length = 170272 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 caaggtatactacacactgaca 55 |||||||||||||||||||||| Sbjct: 50036 caaggtatactacacactgaca 50057
>emb|BX833537.1|CNS0A20K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL60ZH08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 944 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 618 gatgccacaataggatctacctggct 643 ||||||||||| |||||||||||||| Sbjct: 423 gatgccacaattggatctacctggct 398
>emb|BX830149.1|CNS0A1DX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZF12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1347 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 368 cacatcacctttcctgcaccagagcaatttggacatct 405 ||||||||||||||||| || || |||||| ||||||| Sbjct: 1113 cacatcacctttcctgcgccggaacaatttagacatct 1076 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 618 gatgccacaataggatctacctggct 643 ||||||||||| |||||||||||||| Sbjct: 864 gatgccacaattggatctacctggct 839
>dbj|AP002030.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16F4 Length = 34867 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 618 gatgccacaataggatctacctggct 643 ||||||||||| |||||||||||||| Sbjct: 32908 gatgccacaattggatctacctggct 32933
>gb|M97572.1|EPTRREB Eptatretus stouti 18s ribosomal RNA (18S rRNA), 5' end Length = 1959 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 407 tcggtttttggtgctgataaa 427 ||||||||||||||||||||| Sbjct: 252 tcggtttttggtgctgataaa 232
>ref|XM_847818.1| PREDICTED: Canis familiaris similar to deleted in malignant brain tumors 1 isoform c precursor (LOC610335), mRNA Length = 604 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 cctgtacagaggcacgtggggcac 370 ||||||||||||| |||||||||| Sbjct: 210 cctgtacagaggctcgtggggcac 233
>ref|XM_847806.1| PREDICTED: Canis familiaris similar to deleted in malignant brain tumors 1 isoform c precursor (LOC610328), mRNA Length = 951 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 cctgtacagaggcacgtggggcac 370 ||||||||||||| |||||||||| Sbjct: 213 cctgtacagaggctcgtggggcac 236
>ref|XM_847788.1| PREDICTED: Canis familiaris similar to deleted in malignant brain tumors 1 isoform b precursor (LOC610312), mRNA Length = 1116 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 cctgtacagaggcacgtggggcac 370 ||||||||||||| |||||||||| Sbjct: 621 cctgtacagaggctcgtggggcac 644 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 cctgtacagaggcacgtggggcac 370 ||||||||||||| |||||||||| Sbjct: 210 cctgtacagaggctcgtggggcac 233
>ref|XM_544052.2| PREDICTED: Canis familiaris similar to deleted in malignant brain tumors 1 isoform a precursor (LOC486922), mRNA Length = 2654 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 cctgtacagaggcacgtggggcac 370 ||||||||||||| |||||||||| Sbjct: 138 cctgtacagaggctcgtggggcac 161
>ref|XM_544051.2| PREDICTED: Canis familiaris similar to deleted in malignant brain tumors 1 isoform b precursor (LOC486921), mRNA Length = 1251 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 cctgtacagaggcacgtggggcac 370 ||||||||||||| |||||||||| Sbjct: 747 cctgtacagaggctcgtggggcac 770 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 cctgtacagaggcacgtggggcac 370 ||||||||||||| |||||||||| Sbjct: 258 cctgtacagaggctcgtggggcac 281 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 cctgtacagaggcacgtggggcac 370 ||||||||||||| |||||||||| Sbjct: 9 cctgtacagaggctcgtggggcac 32
>ref|XM_848762.1| PREDICTED: Canis familiaris similar to deleted in malignant brain tumors 1 isoform c precursor (LOC611120), mRNA Length = 1008 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 cctgtacagaggcacgtggggcac 370 ||||||||||||| |||||||||| Sbjct: 648 cctgtacagaggctcgtggggcac 671
>gb|AC122405.4| Mus musculus BAC clone RP24-119O6 from chromosome 12, complete sequence Length = 196285 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 12 tgatgagattgaattgtttggtcaaggt 39 |||||||| |||||||||||| |||||| Sbjct: 82382 tgatgagaatgaattgtttggccaaggt 82355
>gb|AY244713.1| Bos taurus DNA cytosine-5 methyltransferase 3b isoform 5 (DNMT3b5) mRNA, partial cds Length = 2370 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 ggacatctctcggtttttgg 417 |||||||||||||||||||| Sbjct: 2110 ggacatctctcggtttttgg 2129
>gb|AY244712.1| Bos taurus DNA cytosine-5 methyltransferase 3b isoform 4 (DNMT3b4) mRNA, complete cds Length = 2421 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 ggacatctctcggtttttgg 417 |||||||||||||||||||| Sbjct: 2110 ggacatctctcggtttttgg 2129
>gb|AY244711.1| Bos taurus DNA cytosine-5 methyltransferase 3b isoform 3 (DNMT3b3) mRNA, partial cds Length = 2302 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 ggacatctctcggtttttgg 417 |||||||||||||||||||| Sbjct: 2110 ggacatctctcggtttttgg 2129
>gb|AY244710.1| Bos taurus DNA cytosine-5 methyltransferase 3b isoform 1 (DNMT3b1) mRNA, partial cds Length = 2491 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 ggacatctctcggtttttgg 417 |||||||||||||||||||| Sbjct: 2110 ggacatctctcggtttttgg 2129
>emb|AL359632.9| Human DNA sequence from clone RP11-269P11 on chromosome 9 Contains the 3' end of the MAPKAP1 gene for mitogen-activated protein kinase associated protein 1 and a CpG island, complete sequence Length = 95397 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 680 tgcataaagatgtgcctcct 699 |||||||||||||||||||| Sbjct: 2650 tgcataaagatgtgcctcct 2669
>emb|CR385039.8| Zebrafish DNA sequence from clone DKEYP-31D1 in linkage group 24, complete sequence Length = 166302 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 cttgacattgtttatctcaa 572 |||||||||||||||||||| Sbjct: 74811 cttgacattgtttatctcaa 74830
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 541 atgctcctgttgcttgacattgtt 564 |||||||||||||| ||||||||| Sbjct: 539704 atgctcctgttgctggacattgtt 539681
>emb|AL929428.5| Zebrafish DNA sequence from clone CH211-167I23 in linkage group 20, complete sequence Length = 14978 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 tgcaccagagcaatttggacatct 405 ||||||||||| |||||||||||| Sbjct: 12573 tgcaccagagccatttggacatct 12596
>gb|AC159995.4| Mus musculus chromosome 1, clone RP24-81G13, complete sequence Length = 204097 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tcctgaactgatatatgcct 297 |||||||||||||||||||| Sbjct: 71745 tcctgaactgatatatgcct 71764
>ref|XM_627191.1| Cryptosporidium parvum Iowa II ferlin-like type II membrane associated protein (cgd8_2910), partial mRNA Length = 4116 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gagattgaattgtttggtca 35 |||||||||||||||||||| Sbjct: 1576 gagattgaattgtttggtca 1557
>ref|NM_181813.1| Bos taurus DNA (cytosine-5-)-methyltransferase 3 beta (DNMT3B), mRNA Length = 2421 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 ggacatctctcggtttttgg 417 |||||||||||||||||||| Sbjct: 2110 ggacatctctcggtttttgg 2129
>emb|CT010489.8| Mouse DNA sequence from clone RP23-189F18 on chromosome 12, complete sequence Length = 112028 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 12 tgatgagattgaattgtttggtcaaggt 39 |||||||| |||||||||||| |||||| Sbjct: 16574 tgatgagaatgaattgtttggccaaggt 16601 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,324,100 Number of Sequences: 3902068 Number of extensions: 5324100 Number of successful extensions: 95910 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95682 Number of HSP's gapped (non-prelim): 220 length of query: 699 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 676 effective length of database: 17,143,297,704 effective search space: 11588869247904 effective search space used: 11588869247904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)