ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal35c04 |
|---|---|
| Clone Library Name | barley_pub |
>AMY2_HORVU (P04063) Alpha-amylase type B isozyme precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (AMY2-2) (High pI alpha-amylase) Length = 427 Score = 144 bits (362), Expect = 3e-34 Identities = 68/134 (50%), Positives = 96/134 (71%), Gaps = 5/134 (3%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 PG++GWWP++AVTF++NHDTGSTQ W FP MQGY YILTHPGTP +FYDH F L Sbjct: 295 PGMIGWWPAKAVTFVDNHDTGSTQHMWPFPSDRVMQGYAYILTHPGTPCIFYDHFFDWGL 354 Query: 488 QQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPIN 321 +++I +L+S+R R I SK++II+A+ +LY A+I+ +++K+G G+ P G Sbjct: 355 KEEIDRLVSVRTRHGIHNESKLQIIEADADLYLAEIDGKVIVKLGPRYDVGNLIPGG--- 411 Query: 320 WIVAAEGHDYKIWE 279 + VAA G+DY +WE Sbjct: 412 FKVAAHGNDYAVWE 425
>AMY6_HORVU (P04750) Alpha-amylase type B isozyme precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (Clones GRAMY56 and 963) Length = 429 Score = 143 bits (360), Expect = 5e-34 Identities = 67/134 (50%), Positives = 93/134 (69%), Gaps = 5/134 (3%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 PG++GWWP++AVTF++NHDTGSTQ W FP MQGY YILTHPG P +FYDH F L Sbjct: 297 PGMIGWWPAKAVTFVDNHDTGSTQHMWPFPSDRVMQGYAYILTHPGNPCIFYDHFFDWGL 356 Query: 488 QQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPIN 321 +++I +L+SIR R I SK++I++A+ +LY A+I +++K+G GH P G Sbjct: 357 KEEIDRLVSIRTRQGIHSESKLQIMEADADLYLAEIEGKVIVKLGPRYDVGHLIPEG--- 413 Query: 320 WIVAAEGHDYKIWE 279 + V A G+DY +WE Sbjct: 414 FKVVAHGNDYAVWE 427
>AMC2_ORYSA (P27941) Alpha-amylase isozyme C2 precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 445 Score = 137 bits (346), Expect = 2e-32 Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 2/131 (1%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 PGV+GWWP++AVTF++NHDTGSTQ W FP MQGY YILTHPG P +FYDH F L Sbjct: 296 PGVIGWWPAKAVTFVDNHDTGSTQQMWPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWGL 355 Query: 488 QQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGSGHFEPS-GPINWIV 312 ++ IA L+++RQR + S +KI+ + + Y A+I+ ++MKIGS + S P + + Sbjct: 356 KEQIAALVAVRQRNGVTATSSLKIMLHDADAYVAEIDGKVVMKIGSRYDVSSLIPPGFHL 415 Query: 311 AAEGHDYKIWE 279 AA G+ Y +WE Sbjct: 416 AAHGNGYAVWE 426
>AM2A_ORYSA (P27935) Alpha-amylase isozyme 2A precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 445 Score = 137 bits (346), Expect = 2e-32 Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 2/131 (1%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 PGV+GWWP++AVTF++NHDTGSTQ W FP MQGY YILTHPG P +FYDH F L Sbjct: 296 PGVIGWWPAKAVTFVDNHDTGSTQQMWPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWGL 355 Query: 488 QQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGSGHFEPS-GPINWIV 312 ++ IA L+++RQR + S +KI+ + + Y A+I+ ++MKIGS + S P + + Sbjct: 356 KEQIAALVAVRQRNGVTATSSLKIMLHDADAYVAEIDGKVVMKIGSRYDVSSLIPPGFHL 415 Query: 311 AAEGHDYKIWE 279 AA G+ Y +WE Sbjct: 416 AAHGNGYAVWE 426
>AM3B_ORYSA (P27937) Alpha-amylase isozyme 3B precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 438 Score = 137 bits (344), Expect = 4e-32 Identities = 67/134 (50%), Positives = 94/134 (70%), Gaps = 5/134 (3%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 PG++GW P +AVTFI+NHDTGSTQ W FP MQGY YILTHPG P +FYDH+F +L Sbjct: 295 PGMIGWLPEKAVTFIDNHDTGSTQNSWPFPSDKVMQGYAYILTHPGVPCIFYDHVFDWNL 354 Query: 488 QQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPIN 321 +Q+I+ L ++R R +I SK+KI+ AE ++Y A I++ ++ KIG+ G+ PS + Sbjct: 355 KQEISTLAAVRSRNEIHPGSKLKILAAEGDVYVAMIDDKVITKIGTRYDVGNLIPS---D 411 Query: 320 WIVAAEGHDYKIWE 279 + V A G++Y IWE Sbjct: 412 FHVVAHGNNYCIWE 425
>AMY1_HORVU (P00693) Alpha-amylase type A isozyme precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (AMY1) (Low pI alpha-amylase) Length = 438 Score = 136 bits (343), Expect = 5e-32 Identities = 63/131 (48%), Positives = 89/131 (67%), Gaps = 2/131 (1%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 PGV+GWWP++A TF++NHDTGSTQ W FP MQGY YILTHPG P +FYDH F+ Sbjct: 297 PGVMGWWPAKAATFVDNHDTGSTQAMWPFPSDKVMQGYAYILTHPGIPCIFYDHFFNWGF 356 Query: 488 QQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGSGHFEPSG-PINWIV 312 + IA L++IR+R I S +KI+ E + Y A+I+ +++KIGS + + P ++ Sbjct: 357 KDQIAALVAIRKRNGITATSALKILMHEGDAYVAEIDGKVVVKIGSRYDVGAVIPAGFVT 416 Query: 311 AAEGHDYKIWE 279 +A G+DY +WE Sbjct: 417 SAHGNDYAVWE 427
>AM3E_ORYSA (P27934) Alpha-amylase isozyme 3E precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 437 Score = 135 bits (339), Expect = 1e-31 Identities = 65/132 (49%), Positives = 88/132 (66%), Gaps = 3/132 (2%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 PG++GW P +AVTF++NHDTGSTQ W FP MQGY YILTHPG P +FYDH+F +L Sbjct: 294 PGLMGWMPDQAVTFVDNHDTGSTQSLWPFPSDKVMQGYAYILTHPGIPCIFYDHVFDWNL 353 Query: 488 QQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGSGHFEPSG--PINWI 315 Q +IA L IR R I S + I+KAE ++Y A I+ ++ K+G ++ G P ++ Sbjct: 354 QHEIATLAEIRSRNGIHAESTLDILKAEGDIYVAMIDGKVITKLGP-RYDAGGIIPSDFH 412 Query: 314 VAAEGHDYKIWE 279 V A G+DY +WE Sbjct: 413 VVAHGNDYCVWE 424
>AMY1_ORYSA (P17654) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) (Isozyme 1B) Length = 434 Score = 134 bits (338), Expect = 2e-31 Identities = 64/131 (48%), Positives = 89/131 (67%), Gaps = 2/131 (1%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 PG++GWWP++A TF++NHDTGSTQ W FP MQGY YILTHPG P +FYDH F L Sbjct: 302 PGMIGWWPAKATTFVDNHDTGSTQHLWPFPSDKVMQGYAYILTHPGNPCIFYDHFFDWGL 361 Query: 488 QQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGSGH-FEPSGPINWIV 312 +++I +L+SIR R I S+++I++A+ +LY A+I+ ++ KIG + E P + V Sbjct: 362 KEEIERLVSIRNRQGIHPASELRIMEADSDLYLAEIDGKVITKIGPRYDVEHLIPEGFQV 421 Query: 311 AAEGHDYKIWE 279 A G Y IWE Sbjct: 422 VAHGDGYAIWE 432
>AMY4_HORVU (P04748) Alpha-amylase type B isozyme (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (Clone 103) (Fragment) Length = 153 Score = 133 bits (334), Expect = 5e-31 Identities = 64/134 (47%), Positives = 92/134 (68%), Gaps = 5/134 (3%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 P ++GWWP++AVTF++NHDTGSTQ W FP MQGY YILTHP TP +FYDH F Sbjct: 21 PSMIGWWPAKAVTFVDNHDTGSTQHMWPFPSDRVMQGYAYILTHPRTPCIFYDHFFDWGP 80 Query: 488 QQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPIN 321 +++I +L+S+R R I SK++II+A+ +LY A+I+ +++K+G G+ P G Sbjct: 81 KEEIDRLVSVRTRHGIHNESKLQIIEADADLYLAEIDGKVIVKLGPRYDVGNLIPGG--- 137 Query: 320 WIVAAEGHDYKIWE 279 + AA G+DY +WE Sbjct: 138 FEGAAHGNDYAVWE 151
>AMYA_VIGMU (P17859) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) Length = 421 Score = 132 bits (333), Expect = 7e-31 Identities = 71/134 (52%), Positives = 89/134 (66%), Gaps = 5/134 (3%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 PG++G P AVTFI+NHDTGSTQ W FP MQGY YILTHPGTP++FYDH F L Sbjct: 291 PGMIGVKPENAVTFIDNHDTGSTQRLWPFPSDKVMQGYAYILTHPGTPSIFYDHFFDWGL 350 Query: 488 QQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPIN 321 ++ IAKL SIR R I +S +KI+ +E +LY A+I+ +M+KIG G+ PS N Sbjct: 351 KEQIAKLSSIRLRNGINEKSTVKIMASEGDLYVAKIDNKIMVKIGPKMDLGNLIPS---N 407 Query: 320 WIVAAEGHDYKIWE 279 VA G DY +WE Sbjct: 408 LHVATSGQDYAVWE 421
>AMY5_HORVU (P04749) Alpha-amylase type B isozyme (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (Clone 168) (Fragment) Length = 135 Score = 132 bits (332), Expect = 9e-31 Identities = 64/134 (47%), Positives = 91/134 (67%), Gaps = 5/134 (3%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 PG++GWWP++AVTF+ NHDTGSTQ W FP MQGY YILTH GTP +FYDH F Sbjct: 3 PGMIGWWPAKAVTFVNNHDTGSTQHMWPFPSDRVMQGYAYILTHQGTPCIFYDHFFDWGP 62 Query: 488 QQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPIN 321 +++I +L+S+ R I SK++II+A+ +L A+I+ +++K+G G+ P G Sbjct: 63 KEEIDRLVSVSTRHGIHSESKLQIIEADADLCLAEIDGKVIVKLGPRYDVGNLIPGG--- 119 Query: 320 WIVAAEGHDYKIWE 279 + VAA G+DY +WE Sbjct: 120 FEVAAHGNDYAVWE 133
>AM3C_ORYSA (P27939) Alpha-amylase isozyme 3C precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 437 Score = 132 bits (332), Expect = 9e-31 Identities = 64/134 (47%), Positives = 92/134 (68%), Gaps = 5/134 (3%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 PG++GW P +AVTFI+NHDTGSTQ W FP MQGY YILTHPG P +FYDH+F +L Sbjct: 295 PGMIGWLPEKAVTFIDNHDTGSTQNSWPFPSDKVMQGYAYILTHPGVPCIFYDHVFDWNL 354 Query: 488 QQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPIN 321 +Q+I+ L ++R R I SK+ I+ A+ ++Y A I++ ++ KIG+ G+ PS + Sbjct: 355 KQEISTLAAVRSRNGIHPGSKLNILAADGDVYVAMIDDKVITKIGTRYDVGNLIPS---D 411 Query: 320 WIVAAEGHDYKIWE 279 + V A G++Y +WE Sbjct: 412 FHVVAHGNNYCVWE 425
>AM3A_ORYSA (P27932) Alpha-amylase isozyme 3A precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 440 Score = 131 bits (329), Expect = 2e-30 Identities = 61/134 (45%), Positives = 91/134 (67%), Gaps = 5/134 (3%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 PG++GW+P +AVTF++NHDTGSTQ W FP + GY YILTHPG P +FYDH+F +L Sbjct: 297 PGMIGWYPEKAVTFVDNHDTGSTQRMWPFPSDKVILGYAYILTHPGVPCIFYDHVFDWNL 356 Query: 488 QQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSGPIN 321 +Q+I L + R+R I SK++++ AE ++Y A ++E ++ KIG G+ PS + Sbjct: 357 KQEINALAATRKRNGINAGSKLRVLAAESDMYVAMVDERVITKIGPRIDVGNIIPS---D 413 Query: 320 WIVAAEGHDYKIWE 279 + + A G+DY +WE Sbjct: 414 FHIVAHGNDYCVWE 427
>AM3D_ORYSA (P27933) Alpha-amylase isozyme 3D precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 436 Score = 130 bits (327), Expect = 4e-30 Identities = 61/130 (46%), Positives = 88/130 (67%), Gaps = 2/130 (1%) Frame = -1 Query: 662 GVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HLQ 486 G++GW P +AVTF++NHDTGSTQ W FP MQGY YILTHPG P +FYDH+F +L+ Sbjct: 295 GMIGWLPEKAVTFVDNHDTGSTQKLWPFPSDKVMQGYAYILTHPGVPCIFYDHMFDWNLK 354 Query: 485 QDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGSGHFEPSG-PINWIVA 309 Q+I L +IR+R I SK++I+ A+ + Y A ++E +M+KIG+ + + P ++ Sbjct: 355 QEITALAAIRERNGINAGSKLRIVVADADAYVAVVDEKVMVKIGTRYDVGNAVPSDFHQT 414 Query: 308 AEGHDYKIWE 279 G DY +WE Sbjct: 415 VHGKDYSVWE 424
>AMY3_WHEAT (P08117) Alpha-amylase AMY3 precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 413 Score = 130 bits (326), Expect = 5e-30 Identities = 64/132 (48%), Positives = 87/132 (65%), Gaps = 3/132 (2%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 PG++GW P + VTFI+NHDTGSTQ W FP MQGY YILTHPG P +FYDH+F L Sbjct: 278 PGMIGWMPEKTVTFIDNHDTGSTQRLWPFPSDKVMQGYAYILTHPGIPCIFYDHVFDWKL 337 Query: 488 QQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGSGHFEPSG--PINWI 315 +Q+I L ++R R I S + I+KAE +LY A+I ++ KIGS + P + Sbjct: 338 KQEITALATVRSRNGIHPGSTLDILKAEGDLYVAKIGGKVITKIGSRYNIGDNVIPSGFK 397 Query: 314 VAAEGHDYKIWE 279 +AA+G++Y +WE Sbjct: 398 IAAKGNNYCVWE 409
>AMY3_HORVU (P04747) Alpha-amylase type B isozyme precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (Clone PHV19) (Fragment) Length = 368 Score = 106 bits (265), Expect = 5e-23 Identities = 44/71 (61%), Positives = 57/71 (80%), Gaps = 1/71 (1%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 PG++GWWP++AVTF++NHDTGSTQ W FP MQGY YILTHPGTP +FYDH F L Sbjct: 295 PGMIGWWPAKAVTFVDNHDTGSTQHMWPFPSDRVMQGYAYILTHPGTPCIFYDHFFDWGL 354 Query: 488 QQDIAKLISIR 456 +++I +L+S+R Sbjct: 355 KEEIDRLVSVR 365
>AMT4_PSESA (P22963) Glucan 1,4-alpha-maltotetraohydrolase precursor (EC| 3.2.1.60) (G4-amylase) (Maltotetraose-forming amylase) (Exo-maltotetraohydrolase) (Maltotetraose-forming exo-amylase) Length = 551 Score = 68.2 bits (165), Expect = 2e-11 Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 13/137 (9%) Frame = -1 Query: 647 WPSRAVTFIENHDTGSTQG------HWRFPYGMEMQGYVYILTHPGTPAVFYDHIFSHLQ 486 W AVTF++NHDTG + G HW G+ Q Y YILT PGTP V++ H++ Sbjct: 303 WREVAVTFVDNHDTGYSPGQNGGQHHWALQDGLIRQAYAYILTSPGTPVVYWSHMYDWGY 362 Query: 485 QD-IAKLISIRQRLKIQCRSKIKIIKAEQNLYA--AQINENLMMKIGSGHFEP----SGP 327 D I +LI +R+ ++ S I L A + + L++ + S P SG Sbjct: 363 GDFIRQLIQVRRTAGVRADSAISFHSGYSGLVATVSGSQQTLVVALNSDLANPGQVASGS 422 Query: 326 INWIVAAEGHDYKIWEA 276 + V A ++W + Sbjct: 423 FSEAVNASNGQVRVWRS 439
>AMT4_PSEST (P13507) Glucan 1,4-alpha-maltotetraohydrolase precursor (EC| 3.2.1.60) (G4-amylase) (Maltotetraose-forming amylase) (Exo-maltotetraohydrolase) (Maltotetraose-forming exo-amylase) Length = 548 Score = 67.8 bits (164), Expect = 3e-11 Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 13/137 (9%) Frame = -1 Query: 647 WPSRAVTFIENHDTGSTQG------HWRFPYGMEMQGYVYILTHPGTPAVFYDHIFSHLQ 486 W AVTF++NHDTG + G HW G+ Q Y YILT PGTP V++ H++ Sbjct: 303 WREVAVTFVDNHDTGYSPGQNGGQHHWALQDGLIRQAYAYILTSPGTPVVYWSHMYDWGY 362 Query: 485 QD-IAKLISIRQRLKIQCRSKIKIIKAEQNLYA--AQINENLMMKIGSGHFEP----SGP 327 D I +LI +R+ ++ S I L A + + L++ + S P SG Sbjct: 363 GDFIRQLIQVRRAAGVRADSAISFHSGYSGLVATVSGSQQTLVVALNSDLGNPGQVASGS 422 Query: 326 INWIVAAEGHDYKIWEA 276 + V A ++W + Sbjct: 423 FSEAVNASNGQVRVWRS 439
>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) (Isozyme 1B) Length = 348 Score = 57.0 bits (136), Expect = 5e-08 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = -1 Query: 665 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 489 PG++GWWP++A TF++NHDTG+ P +FYDH F L Sbjct: 285 PGMIGWWPAKATTFVDNHDTGN-------------------------PCIFYDHFFDWGL 319 Query: 488 QQDIAKLISIRQR 450 + +I +L+SIR R Sbjct: 320 KDEIERLVSIRNR 332
>AMY_BACST (P06279) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) Length = 549 Score = 38.1 bits (87), Expect = 0.024 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Frame = -1 Query: 644 PSRAVTFIENHDT--GSTQGHWRFPYGMEMQGYVYILT-HPGTPAVFYDHIFSHLQQDIA 474 P+ AVTF++NHDT G W P+ + Y +ILT G P VFY + Q +I Sbjct: 354 PTLAVTFVDNHDTEPGQALQSWVDPW-FKPLAYAFILTRQEGYPCVFYGDYYGIPQYNIP 412 Query: 473 KLIS 462 L S Sbjct: 413 SLKS 416
>AMY_BACAM (P00692) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) Length = 514 Score = 35.0 bits (79), Expect = 0.20 Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 7/56 (12%) Frame = -1 Query: 644 PSRAVTFIENHDT------GSTQGHWRFPYGMEMQGYVYILT-HPGTPAVFYDHIF 498 P +AVTF+ENHDT ST W P Y +ILT G P VFY ++ Sbjct: 348 PEKAVTFVENHDTQPGQSLESTVQTWFKPL-----AYAFILTRESGYPQVFYGDMY 398
>AMY_BACLI (P06278) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) (BLA) Length = 512 Score = 34.3 bits (77), Expect = 0.35 Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 8/95 (8%) Frame = -1 Query: 644 PSRAVTFIENHDT------GSTQGHWRFPYGMEMQGYVYILT-HPGTPAVFYDHIFSHLQ 486 P +AVTF++NHDT ST W P Y +ILT G P VFY ++ Sbjct: 346 PLKAVTFVDNHDTQPGQSLESTVQTWFKPL-----AYAFILTRESGYPQVFYGDMYGTKG 400 Query: 485 QDIAKLISIRQRLKIQCRSKIKIIKA-EQNLYAAQ 384 ++ +++ +++ I+KA +Q Y AQ Sbjct: 401 DSQREIPALKHKIE-------PILKARKQYAYGAQ 428
>AMY4_SCHPO (Q9Y7S9) Probable alpha-amylase C63.02c precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 564 Score = 31.2 bits (69), Expect = 2.9 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Frame = -1 Query: 632 VTFIENHDTGSTQGHWRFPYGMEMQGYV-----YILTHPGTPAVFY 510 +TFIENHD +RFPY Q + ++L G P++FY Sbjct: 315 LTFIENHDL------YRFPYYTSDQSQIMGALSFVLIWDGIPSIFY 354
>MDR20_ARATH (Q9LSJ5) Putative multidrug resistance protein 20 (P-glycoprotein 18)| Length = 1225 Score = 30.8 bits (68), Expect = 3.8 Identities = 22/75 (29%), Positives = 32/75 (42%) Frame = -1 Query: 515 FYDHIFSHLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGSGHFEP 336 FYD + ++ D + S R R I ++ E L+A I EN+M S + Sbjct: 1031 FYDPLKGIVKIDGRDIRSCHLR---SLRQHIALVSQEPTLFAGTIRENIMYGGASNKIDE 1087 Query: 335 SGPINWIVAAEGHDY 291 S I AA HD+ Sbjct: 1088 SEIIEAAKAANAHDF 1102
>AMY2_ECOLI (P26612) Cytoplasmic alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) Length = 495 Score = 29.6 bits (65), Expect = 8.5 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = -1 Query: 644 PSRAVTFIENHDTGSTQGHWR--FPYGMEMQGYVYILTHPGTPAVFYDHIFSHLQQDI 477 P AVT + NHDT Q P+ + + +L G P+VFY ++ +D+ Sbjct: 321 PFHAVTLVANHDTQPLQALEAPVEPWFKPLAYALILLRENGVPSVFYPDLYGAHYEDV 378 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,300,239 Number of Sequences: 219361 Number of extensions: 1874757 Number of successful extensions: 4751 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 4594 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4720 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
