ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal35b16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068145.1| Oryza sativa (japonica cultivar-group) cDNA clon... 482 e-133
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 161 4e-36
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 161 4e-36
4emb|AL731872.2|CNS08C8C Oryza sativa chromosome 12, . BAC OJ1003... 161 4e-36
5ref|NM_180707.1| Arabidopsis thaliana unknown protein AT5G14260 ... 72 3e-09
6ref|NM_203049.1| Arabidopsis thaliana unknown protein AT5G14260 ... 72 3e-09
7ref|NM_121430.3| Arabidopsis thaliana unknown protein AT5G14260 ... 72 3e-09
8gb|AC138464.19| Medicago truncatula clone mth2-29i23, complete s... 72 3e-09
9gb|AY150480.1| Arabidopsis thaliana unknown protein (At5g14260) ... 72 3e-09
10emb|AL163817.1|ATF18O22 Arabidopsis thaliana DNA chromosome 5, B... 72 3e-09
11gb|AY065084.1| Arabidopsis thaliana putative protein (At5g14260;... 72 3e-09
12emb|BX833547.1|CNS09Z5A Arabidopsis thaliana Full-length cDNA Co... 72 3e-09
13emb|BX831365.1|CNS09YP0 Arabidopsis thaliana Full-length cDNA Co... 72 3e-09
14gb|AY074312.1| Arabidopsis thaliana unknown protein (At5g14260) ... 64 6e-07
15ref|XM_708603.1| Candida albicans SC5314 hypothetical protein (C... 44 0.59
16ref|XM_708558.1| Candida albicans SC5314 hypothetical protein (C... 44 0.59
17gb|AC121888.3| Mus musculus BAC clone RP24-142M5 from chromosome... 42 2.3
18gb|AC106799.3| Homo sapiens chromosome 5 clone RP11-445O3, compl... 42 2.3
19gb|AC010634.6| Homo sapiens chromosome 5 clone CTD-2318H23, comp... 42 2.3
20ref|NM_101567.2| Arabidopsis thaliana nucleic acid binding AT1G1... 40 9.2
21gb|AC154221.3| Mus musculus BAC clone RP24-373L7 from chromosome... 40 9.2
22emb|Z83244.1|CEW06F12 Caenorhabditis elegans Cosmid W06F12, comp... 40 9.2
23gb|AC007651.2| Arabidopsis thaliana chromosome I BAC F20D23 geno... 40 9.2
24emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 9.2
25ref|XM_759885.1| Theileria parva strain Muguga hypothetical prot... 40 9.2
26gb|AC149518.2| Xenopus tropicalis clone CH216-59A18, complete se... 40 9.2
27dbj|AK162653.1| Mus musculus adult male bone cDNA, RIKEN full-le... 40 9.2
28gb|AC026418.4| Homo sapiens chromosome 5 clone CTD-2100N14, comp... 40 9.2
29dbj|AK041884.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 9.2
30dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
31gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I... 40 9.2
32gb|AC141930.2| Homo sapiens fosmid clone XXFOS-81289B3 from 2, c... 40 9.2
33dbj|AK174776.1| Ciona intestinalis cDNA, clone:cilv016i18, full ... 40 9.2
34dbj|BS000200.1| Pan troglodytes chromosome 22 clone:PTB-035B21, ... 40 9.2
35emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 9.2
36gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome 40 9.2
37gb|AC093471.8| Mus musculus chromosome 3, clone RP23-29M11, comp... 40 9.2 
>dbj|AK068145.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134J07, full
            insert sequence
          Length = 1886

 Score =  482 bits (243), Expect = e-133
 Identities = 471/547 (86%)
 Strand = Plus / Minus

                                                                        
Query: 124  cttatttcaattcaggagcatatagtgcagggcaaggtgacacggtatgatcaggcaagc 183
            |||||||||||||||||||| || | ||||||||||||||||| || || ||||||||  
Sbjct: 1590 cttatttcaattcaggagcaaatggagcagggcaaggtgacacagtgtggtcaggcaaat 1531

                                                                        
Query: 184  cacttatgaactcgttagcagcctcaagacagccatgcagcattttcttctctaacctta 243
            || |||||||||| ||||||||||  ||||| ||||||| || ||||||||| || ||||
Sbjct: 1530 catttatgaactcattagcagcctggagacaaccatgcaacaatttcttctccaatctta 1471

                                                                        
Query: 244  caagtctagtagcaacttctttctttggttccaaactgccatcggccaacattgcttcat 303
            |||| |||||||| ||||| || |||||||||||| ||||||| |||||||| || ||||
Sbjct: 1470 caagcctagtagcgacttccttttttggttccaaattgccatctgccaacatagcatcat 1411

                                                                        
Query: 304  cctcatccaaattagtcggataaccagccaatcttgatttcaggtacacaacaagttggt 363
            ||||||||||| | || |||||| ||||||||| ||| | || |||  ||||||||||||
Sbjct: 1410 cctcatccaaagttgttggataatcagccaatcgtgactccaagtatccaacaagttggt 1351

                                                                        
Query: 364  ccagtacagctcgctctgagcaaggactaactggacatgtatcaccttccgacgaaagta 423
            | ||||| |||||||||| ||| ||||| |||||||||||||||||||| || |||||||
Sbjct: 1350 caagtactgctcgctctgtgcatggactgactggacatgtatcaccttctgaagaaagta 1291

                                                                        
Query: 424  tacattgcatttcatctggatctgaaatgtatcctagtctcaagtatggcagcatttcag 483
            |  |||||||||||||||||||||||||||||||||| ||||| || ||||||||||| |
Sbjct: 1290 tggattgcatttcatctggatctgaaatgtatcctagcctcaaatagggcagcatttctg 1231

                                                                        
Query: 484  aaatagtttgcttctctttgcctacacagacttggaatttttggattgcaagctttccat 543
             ||| |||| ||||||||| || |||||||| ||||| |||||||| || ||||| ||||
Sbjct: 1230 caattgtttccttctctttacccacacagacatggaaattttggatagccagcttcccat 1171

                                                                        
Query: 544  ttctttgagcaaccattctcttctcttggtattgaggatcttcagtgtttagggatgcct 603
            ||||||||||||||||||||||||||||| | |||||||||||  |||||||||||||||
Sbjct: 1170 ttctttgagcaaccattctcttctcttggaactgaggatcttctatgtttagggatgcct 1111

                                                                        
Query: 604  cgattgctatgcggtcatatggattgtcctcatcaacaaaaccataattgagaagcaacc 663
            | ||  |||| || ||||||||||| || || |||| |||||| || ||||| ||||| |
Sbjct: 1110 caatcactatacgatcatatggattatcttcgtcaataaaaccgtagttgaggagcaatc 1051

                   
Query: 664  tggagtt 670
            | |||||
Sbjct: 1050 tagagtt 1044
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  161 bits (81), Expect = 4e-36
 Identities = 150/173 (86%)
 Strand = Plus / Minus

                                                                           
Query: 121     taccttatttcaattcaggagcatatagtgcagggcaaggtgacacggtatgatcaggca 180
               ||||||||||||||||||||||| || | ||||||||||||||||| || || |||||||
Sbjct: 7550074 taccttatttcaattcaggagcaaatggagcagggcaaggtgacacagtgtggtcaggca 7550015

                                                                           
Query: 181     agccacttatgaactcgttagcagcctcaagacagccatgcagcattttcttctctaacc 240
               |  || |||||||||| ||||||||||  ||||| ||||||| || ||||||||| || |
Sbjct: 7550014 aatcatttatgaactcattagcagcctggagacaaccatgcaacaatttcttctccaatc 7549955

                                                                    
Query: 241     ttacaagtctagtagcaacttctttctttggttccaaactgccatcggccaac 293
               ||||||| |||||||| ||||| || |||||||||||| ||||||| ||||||
Sbjct: 7549954 ttacaagcctagtagcgacttccttttttggttccaaattgccatctgccaac 7549902



 Score =  141 bits (71), Expect = 3e-30
 Identities = 113/127 (88%)
 Strand = Plus / Minus

                                                                           
Query: 388     gactaactggacatgtatcaccttccgacgaaagtatacattgcatttcatctggatctg 447
               |||| |||||||||||||||||||| || ||||||||  |||||||||||||||||||||
Sbjct: 7548927 gacttactggacatgtatcaccttctgaagaaagtatggattgcatttcatctggatctg 7548868

                                                                           
Query: 448     aaatgtatcctagtctcaagtatggcagcatttcagaaatagtttgcttctctttgccta 507
               ||||||||||||| ||||| || ||||||||||| | ||| |||| ||||||||| || |
Sbjct: 7548867 aaatgtatcctagcctcaaatagggcagcatttctgcaattgtttccttctctttaccca 7548808

                      
Query: 508     cacagac 514
               |||||||
Sbjct: 7548807 cacagac 7548801



 Score =  111 bits (56), Expect = 3e-21
 Identities = 80/88 (90%)
 Strand = Plus / Minus

                                                                           
Query: 516     tggaatttttggattgcaagctttccatttctttgagcaaccattctcttctcttggtat 575
               ||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||| | 
Sbjct: 7548717 tggaaattttggatagccagcttcccatttctttgagcaaccattctcttctcttggaac 7548658

                                           
Query: 576     tgaggatcttcagtgtttagggatgcct 603
               |||||||||||  |||||||||||||||
Sbjct: 7548657 tgaggatcttctatgtttagggatgcct 7548630



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                           
Query: 300     tcatcctcatccaaattagtcggataaccagccaatcttgatttcaggtacacaacaagt 359
               ||||||||||||||| | || |||||| ||||||||| ||| | || |||  ||||||||
Sbjct: 7549801 tcatcctcatccaaagttgttggataatcagccaatcgtgactccaagtatccaacaagt 7549742

                                               
Query: 360     tggtccagtacagctcgctctgagcaaggact 391
               ||||| ||||| |||||||||| ||| |||||
Sbjct: 7549741 tggtcaagtactgctcgctctgtgcatggact 7549710
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  161 bits (81), Expect = 4e-36
 Identities = 150/173 (86%)
 Strand = Plus / Minus

                                                                           
Query: 121     taccttatttcaattcaggagcatatagtgcagggcaaggtgacacggtatgatcaggca 180
               ||||||||||||||||||||||| || | ||||||||||||||||| || || |||||||
Sbjct: 7549953 taccttatttcaattcaggagcaaatggagcagggcaaggtgacacagtgtggtcaggca 7549894

                                                                           
Query: 181     agccacttatgaactcgttagcagcctcaagacagccatgcagcattttcttctctaacc 240
               |  || |||||||||| ||||||||||  ||||| ||||||| || ||||||||| || |
Sbjct: 7549893 aatcatttatgaactcattagcagcctggagacaaccatgcaacaatttcttctccaatc 7549834

                                                                    
Query: 241     ttacaagtctagtagcaacttctttctttggttccaaactgccatcggccaac 293
               ||||||| |||||||| ||||| || |||||||||||| ||||||| ||||||
Sbjct: 7549833 ttacaagcctagtagcgacttccttttttggttccaaattgccatctgccaac 7549781



 Score =  141 bits (71), Expect = 3e-30
 Identities = 113/127 (88%)
 Strand = Plus / Minus

                                                                           
Query: 388     gactaactggacatgtatcaccttccgacgaaagtatacattgcatttcatctggatctg 447
               |||| |||||||||||||||||||| || ||||||||  |||||||||||||||||||||
Sbjct: 7548806 gacttactggacatgtatcaccttctgaagaaagtatggattgcatttcatctggatctg 7548747

                                                                           
Query: 448     aaatgtatcctagtctcaagtatggcagcatttcagaaatagtttgcttctctttgccta 507
               ||||||||||||| ||||| || ||||||||||| | ||| |||| ||||||||| || |
Sbjct: 7548746 aaatgtatcctagcctcaaatagggcagcatttctgcaattgtttccttctctttaccca 7548687

                      
Query: 508     cacagac 514
               |||||||
Sbjct: 7548686 cacagac 7548680



 Score =  111 bits (56), Expect = 3e-21
 Identities = 80/88 (90%)
 Strand = Plus / Minus

                                                                           
Query: 516     tggaatttttggattgcaagctttccatttctttgagcaaccattctcttctcttggtat 575
               ||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||| | 
Sbjct: 7548596 tggaaattttggatagccagcttcccatttctttgagcaaccattctcttctcttggaac 7548537

                                           
Query: 576     tgaggatcttcagtgtttagggatgcct 603
               |||||||||||  |||||||||||||||
Sbjct: 7548536 tgaggatcttctatgtttagggatgcct 7548509



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                           
Query: 300     tcatcctcatccaaattagtcggataaccagccaatcttgatttcaggtacacaacaagt 359
               ||||||||||||||| | || |||||| ||||||||| ||| | || |||  ||||||||
Sbjct: 7549680 tcatcctcatccaaagttgttggataatcagccaatcgtgactccaagtatccaacaagt 7549621

                                               
Query: 360     tggtccagtacagctcgctctgagcaaggact 391
               ||||| ||||| |||||||||| ||| |||||
Sbjct: 7549620 tggtcaagtactgctcgctctgtgcatggact 7549589
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>emb|AL731872.2|CNS08C8C Oryza sativa chromosome 12, . BAC OJ1003_E07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 113215

 Score =  161 bits (81), Expect = 4e-36
 Identities = 150/173 (86%)
 Strand = Plus / Minus

                                                                         
Query: 121   taccttatttcaattcaggagcatatagtgcagggcaaggtgacacggtatgatcaggca 180
             ||||||||||||||||||||||| || | ||||||||||||||||| || || |||||||
Sbjct: 38141 taccttatttcaattcaggagcaaatggagcagggcaaggtgacacagtgtggtcaggca 38082

                                                                         
Query: 181   agccacttatgaactcgttagcagcctcaagacagccatgcagcattttcttctctaacc 240
             |  || |||||||||| ||||||||||  ||||| ||||||| || ||||||||| || |
Sbjct: 38081 aatcatttatgaactcattagcagcctggagacaaccatgcaacaatttcttctccaatc 38022

                                                                  
Query: 241   ttacaagtctagtagcaacttctttctttggttccaaactgccatcggccaac 293
             ||||||| |||||||| ||||| || |||||||||||| ||||||| ||||||
Sbjct: 38021 ttacaagcctagtagcgacttccttttttggttccaaattgccatctgccaac 37969



 Score =  141 bits (71), Expect = 3e-30
 Identities = 113/127 (88%)
 Strand = Plus / Minus

                                                                         
Query: 388   gactaactggacatgtatcaccttccgacgaaagtatacattgcatttcatctggatctg 447
             |||| |||||||||||||||||||| || ||||||||  |||||||||||||||||||||
Sbjct: 36994 gacttactggacatgtatcaccttctgaagaaagtatggattgcatttcatctggatctg 36935

                                                                         
Query: 448   aaatgtatcctagtctcaagtatggcagcatttcagaaatagtttgcttctctttgccta 507
             ||||||||||||| ||||| || ||||||||||| | ||| |||| ||||||||| || |
Sbjct: 36934 aaatgtatcctagcctcaaatagggcagcatttctgcaattgtttccttctctttaccca 36875

                    
Query: 508   cacagac 514
             |||||||
Sbjct: 36874 cacagac 36868



 Score =  111 bits (56), Expect = 3e-21
 Identities = 80/88 (90%)
 Strand = Plus / Minus

                                                                         
Query: 516   tggaatttttggattgcaagctttccatttctttgagcaaccattctcttctcttggtat 575
             ||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||| | 
Sbjct: 36784 tggaaattttggatagccagcttcccatttctttgagcaaccattctcttctcttggaac 36725

                                         
Query: 576   tgaggatcttcagtgtttagggatgcct 603
             |||||||||||  |||||||||||||||
Sbjct: 36724 tgaggatcttctatgtttagggatgcct 36697



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                         
Query: 300   tcatcctcatccaaattagtcggataaccagccaatcttgatttcaggtacacaacaagt 359
             ||||||||||||||| | || |||||| ||||||||| ||| | || |||  ||||||||
Sbjct: 37868 tcatcctcatccaaagttgttggataatcagccaatcgtgactccaagtatccaacaagt 37809

                                             
Query: 360   tggtccagtacagctcgctctgagcaaggact 391
             ||||| ||||| |||||||||| ||| |||||
Sbjct: 37808 tggtcaagtactgctcgctctgtgcatggact 37777
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>ref|NM_180707.1| Arabidopsis thaliana unknown protein AT5G14260 transcript variant
            AT5G14260.1 mRNA, complete cds
          Length = 2132

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                    
Query: 537  tttccatttctttgagcaaccattctcttctcttggtattgaggatcttcagtgtt 592
            ||||| || |||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1276 tttccgttcctttgagcaaccattctcttgtcctggtattgaggatcctcagtgtt 1221
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>ref|NM_203049.1| Arabidopsis thaliana unknown protein AT5G14260 transcript variant
            AT5G14260.3 mRNA, complete cds
          Length = 2067

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                    
Query: 537  tttccatttctttgagcaaccattctcttctcttggtattgaggatcttcagtgtt 592
            ||||| || |||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1276 tttccgttcctttgagcaaccattctcttgtcctggtattgaggatcctcagtgtt 1221
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>ref|NM_121430.3| Arabidopsis thaliana unknown protein AT5G14260 transcript variant
            AT5G14260.2 mRNA, complete cds
          Length = 2017

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                    
Query: 537  tttccatttctttgagcaaccattctcttctcttggtattgaggatcttcagtgtt 592
            ||||| || |||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1276 tttccgttcctttgagcaaccattctcttgtcctggtattgaggatcctcagtgtt 1221
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>gb|AC138464.19| Medicago truncatula clone mth2-29i23, complete sequence
          Length = 134105

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                     
Query: 534   agctttccatttctttgagcaaccattctcttctcttggtattgaggatcttcagt 589
             ||||||||||||||||||||||| ||||| || ||||| ||||| |||||||||||
Sbjct: 58747 agctttccatttctttgagcaactattcttttatcttgatattgtggatcttcagt 58692
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>gb|AY150480.1| Arabidopsis thaliana unknown protein (At5g14260) mRNA, complete cds
          Length = 1576

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                    
Query: 537  tttccatttctttgagcaaccattctcttctcttggtattgaggatcttcagtgtt 592
            ||||| || |||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1133 tttccgttcctttgagcaaccattctcttgtcctggtattgaggatcctcagtgtt 1078
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>emb|AL163817.1|ATF18O22 Arabidopsis thaliana DNA chromosome 5, BAC clone F18O22 (ESSA project)
          Length = 100269

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                     
Query: 537   tttccatttctttgagcaaccattctcttctcttggtattgaggatcttcagtgtt 592
             ||||| || |||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 21878 tttccgttcctttgagcaaccattctcttgtcctggtattgaggatcctcagtgtt 21823



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 630   tcctcatcaacaaaaccataattgagaagcaa 661
             |||||||||||||| ||||| || ||||||||
Sbjct: 21689 tcctcatcaacaaatccatagttcagaagcaa 21658
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>gb|AY065084.1| Arabidopsis thaliana putative protein (At5g14260; F18O22_50) mRNA,
            complete cds
          Length = 2078

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                    
Query: 537  tttccatttctttgagcaaccattctcttctcttggtattgaggatcttcagtgtt 592
            ||||| || |||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1223 tttccgttcctttgagcaaccattctcttgtcctggtattgaggatcctcagtgtt 1168
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>emb|BX833547.1|CNS09Z5A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL61ZF06 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1900

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                    
Query: 537  tttccatttctttgagcaaccattctcttctcttggtattgaggatcttcagtgtt 592
            ||||| || |||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1197 tttccgttcctttgagcaaccattctcttgtcctggtattgaggatcctcagtgtt 1142
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>emb|BX831365.1|CNS09YP0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS82ZC07 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1902

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                    
Query: 537  tttccatttctttgagcaaccattctcttctcttggtattgaggatcttcagtgtt 592
            ||||| || |||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 1240 tttccgttcctttgagcaaccattctcttgtcctggtattgaggatcctcagtgtt 1185
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>gb|AY074312.1| Arabidopsis thaliana unknown protein (At5g14260) mRNA, complete cds
          Length = 1997

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 537  tttccatttctttgagcaaccattctcttctcttggtattgaggatcttcagtgtt 592
            ||||| || |||||||||||||||||||| || |||||||||||| | ||||||||
Sbjct: 1276 tttccgttcctttgagcaaccattctcttgtcctggtattgaggaccctcagtgtt 1221
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>ref|XM_708603.1| Candida albicans SC5314 hypothetical protein (CaO19.8649), mRNA
          Length = 2550

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 253  tagcaacttctttctttggttc 274
            ||||||||||||||||||||||
Sbjct: 1843 tagcaacttctttctttggttc 1822
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>ref|XM_708558.1| Candida albicans SC5314 hypothetical protein (CaO19.1047), mRNA
          Length = 2550

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 253  tagcaacttctttctttggttc 274
            ||||||||||||||||||||||
Sbjct: 1843 tagcaacttctttctttggttc 1822
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>gb|AC121888.3| Mus musculus BAC clone RP24-142M5 from chromosome 1, complete sequence
          Length = 158354

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 257   aacttctttctttggttccaaactg 281
             ||||||||||||| |||||||||||
Sbjct: 80488 aacttctttcttttgttccaaactg 80512
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>gb|AC106799.3| Homo sapiens chromosome 5 clone RP11-445O3, complete sequence
          Length = 176095

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 325  aaccagccaatcttgatttcaggtacaca 353
            ||||||||||||||||||| || ||||||
Sbjct: 5406 aaccagccaatcttgattttagatacaca 5434
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>gb|AC010634.6| Homo sapiens chromosome 5 clone CTD-2318H23, complete sequence
          Length = 118994

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 325    aaccagccaatcttgatttcaggtacaca 353
              ||||||||||||||||||| || ||||||
Sbjct: 104789 aaccagccaatcttgattttagatacaca 104817
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>ref|NM_101567.2| Arabidopsis thaliana nucleic acid binding AT1G17070 mRNA, complete
           cds
          Length = 2679

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 625 gattgtcctcatcaacaaaaccat 648
           |||||||||||||| |||||||||
Sbjct: 511 gattgtcctcatcatcaaaaccat 488
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>gb|AC154221.3| Mus musculus BAC clone RP24-373L7 from chromosome 13, complete
            sequence
          Length = 157332

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tacagctcgctctgagcaag 387
            ||||||||||||||||||||
Sbjct: 1866 tacagctcgctctgagcaag 1847
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>emb|Z83244.1|CEW06F12 Caenorhabditis elegans Cosmid W06F12, complete sequence
          Length = 29520

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    tacatggctgaaaaaacaaa 42
             ||||||||||||||||||||
Sbjct: 13448 tacatggctgaaaaaacaaa 13467
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>gb|AC007651.2| Arabidopsis thaliana chromosome I BAC F20D23 genomic sequence, complete
             sequence
          Length = 114935

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 625   gattgtcctcatcaacaaaaccat 648
             |||||||||||||| |||||||||
Sbjct: 85337 gattgtcctcatcatcaaaaccat 85360
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>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17,
             complete sequence
          Length = 159894

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 557   cattctcttctcttggtatt 576
             ||||||||||||||||||||
Sbjct: 56035 cattctcttctcttggtatt 56016
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>ref|XM_759885.1| Theileria parva strain Muguga hypothetical protein (TP02_0412)
            partial mRNA
          Length = 1923

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  tcatcctcatccaaattagt 319
            ||||||||||||||||||||
Sbjct: 1070 tcatcctcatccaaattagt 1051
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>gb|AC149518.2| Xenopus tropicalis clone CH216-59A18, complete sequence
          Length = 210140

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     tgtgcaataaaactgtttgc 75
              ||||||||||||||||||||
Sbjct: 125079 tgtgcaataaaactgtttgc 125098
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>dbj|AK162653.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830144B01 product:unclassifiable, full
            insert sequence
          Length = 4247

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tacagctcgctctgagcaag 387
            ||||||||||||||||||||
Sbjct: 3431 tacagctcgctctgagcaag 3412
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>gb|AC026418.4| Homo sapiens chromosome 5 clone CTD-2100N14, complete sequence
          Length = 153198

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   tttcaattcaggagcatata 147
             ||||||||||||||||||||
Sbjct: 19818 tttcaattcaggagcatata 19799
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>dbj|AK041884.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630043P06 product:unclassifiable, full
           insert sequence
          Length = 2345

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 368 tacagctcgctctgagcaag 387
           ||||||||||||||||||||
Sbjct: 105 tacagctcgctctgagcaag 86
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 557      cattctcttctcttggtatt 576
                ||||||||||||||||||||
Sbjct: 34331632 cattctcttctcttggtatt 34331613
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>gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I1 genomic sequence, complete
            sequence
          Length = 93677

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 625  gattgtcctcatcaacaaaaccat 648
            |||||||||||||| |||||||||
Sbjct: 9533 gattgtcctcatcatcaaaaccat 9556
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>gb|AC141930.2| Homo sapiens fosmid clone XXFOS-81289B3 from 2, complete sequence
          Length = 39723

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 576   tgaggatcttcagtgtttag 595
             ||||||||||||||||||||
Sbjct: 16751 tgaggatcttcagtgtttag 16732
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>dbj|AK174776.1| Ciona intestinalis cDNA, clone:cilv016i18, full insert sequence
          Length = 984

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 338 tgatttcaggtacacaacaa 357
           ||||||||||||||||||||
Sbjct: 366 tgatttcaggtacacaacaa 347
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>dbj|BS000200.1| Pan troglodytes chromosome 22 clone:PTB-035B21, map 22, partial
             sequences, complete sequence
          Length = 31919

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   acagccatgcagcattttct 231
             ||||||||||||||||||||
Sbjct: 17315 acagccatgcagcattttct 17334
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>emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0322F07, complete
             sequence
          Length = 100419

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 557   cattctcttctcttggtatt 576
             ||||||||||||||||||||
Sbjct: 16799 cattctcttctcttggtatt 16780
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>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome
          Length = 1698955

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    caaactgccatcggccaaca 294
              ||||||||||||||||||||
Sbjct: 152440 caaactgccatcggccaaca 152421
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>gb|AC093471.8| Mus musculus chromosome 3, clone RP23-29M11, complete sequence
          Length = 193703

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 498    tctttgcctacacagacttggaat 521
              |||||||| |||||||||||||||
Sbjct: 176213 tctttgcccacacagacttggaat 176190


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,243,619
Number of Sequences: 3902068
Number of extensions: 7243619
Number of successful extensions: 194443
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 194204
Number of HSP's gapped (non-prelim): 239
length of query: 670
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 647
effective length of database: 17,143,297,704
effective search space: 11091713614488
effective search space used: 11091713614488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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