| Clone Name | rbaal34l10 |
|---|---|
| Clone Library Name | barley_pub |
>YD52_SCHPO (Q10307) Hypothetical protein C6C3.02c in chromosome I| Length = 172 Score = 36.6 bits (83), Expect = 0.058 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 23/99 (23%) Frame = -2 Query: 458 GTGSAMAHRAVDAVMG----------------PRTIQHETVVSEAAASMTP-------MD 348 G GSA+ H + G P++ +V A S P + Sbjct: 69 GIGSAIGHTVGSVITGGFSGSGSNNAPADTSVPQSSYSNSVPEAAYGSAPPSTFASSAIS 128 Query: 347 NAADDKCGNPSKAFQDCINHYGSDISKCQFYLDMLNECR 231 A + C +K F DCIN + + S+C +YL+ L C+ Sbjct: 129 EEAKNACKGDAKMFADCINEH--EFSQCSYYLEQLKACQ 165
>YHR6_YEAST (P38824) Hypothetical 17.3 kDa protein in ERP5-ORC6 intergenic| region Length = 151 Score = 32.7 bits (73), Expect = 0.84 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = -2 Query: 350 DNAADDKCGNPSKAFQDCINHYGSDISKCQFYLDMLNECRR 228 D+ D C SK C+ D SKCQ Y D EC++ Sbjct: 97 DSQYYDPCEESSKLSFQCLERNDYDRSKCQEYFDAYRECKK 137
>DCUP_PROMM (Q7V8B4) Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD)| Length = 352 Score = 30.4 bits (67), Expect = 4.2 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = -2 Query: 470 GMAFGTGSAMAHRAVDAVMGPRTIQHETVVSEAAASMTPMDNA 342 G+ FGT A+ R VDAV R +H + TP DNA Sbjct: 292 GLLFGTPEAIRERIVDAVRKARGRRHILNLGHGILPGTPEDNA 334
>G6PI_PASMU (Q9CNL2) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 549 Score = 30.0 bits (66), Expect = 5.4 Identities = 17/52 (32%), Positives = 20/52 (38%) Frame = +3 Query: 444 STASTESHALSNSGPNSAHDTATAALGSSRRRSLTGWSWWVSHRSSTWSRAG 599 +TA ESH + S + A A G W WV R S WS G Sbjct: 228 ATAKDESHVAKHFAALSTNSKAVAEFGIDTNNMFEFWD-WVGGRYSLWSAIG 278
>YQ5B_CAEEL (Q09254) Hypothetical protein C16C10.11| Length = 154 Score = 29.6 bits (65), Expect = 7.1 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%) Frame = -2 Query: 452 GSAMAHRAVDAVMGPRTIQHETVVSEAAASM-TPMDNAADDKCGNPSKAFQDCINHYGSD 276 GSA+ H G + E + AAA P + C + F DC + SD Sbjct: 77 GSAVGHAVGGMFTGGGSSHAEQAPAAAAAPAGAPQASGYSQPCEFEWRQFVDCAQNQ-SD 135 Query: 275 ISKCQFYLDMLNECR 231 +S C + D+ +C+ Sbjct: 136 VSLCNGFNDIFKQCK 150
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 29.6 bits (65), Expect = 7.1 Identities = 23/75 (30%), Positives = 37/75 (49%) Frame = +3 Query: 366 CSGLRHNSLMLNGTGTHHSVNSPVRHSTASTESHALSNSGPNSAHDTATAALGSSRRRSL 545 C G + S+ L G G + + V S+ S+ + + S+S P+S+ T T + SS S Sbjct: 107 CGGDLYWSVYLTGNGV---LQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSS 163 Query: 546 TGWSWWVSHRSSTWS 590 + S S SS+ S Sbjct: 164 SSSSSSSSSSSSSSS 178
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 29.6 bits (65), Expect = 7.1 Identities = 18/51 (35%), Positives = 29/51 (56%) Frame = +3 Query: 378 RHNSLMLNGTGTHHSVNSPVRHSTASTESHALSNSGPNSAHDTATAALGSS 530 RHN L+G T S S R ++ + SH+ S+S +S+H A++ + SS Sbjct: 433 RHN---LHGRSTTSSSRSHSRSPSSYSSSHSSSSSSHSSSHSHASSPVQSS 480 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,897,164 Number of Sequences: 219361 Number of extensions: 1208027 Number of successful extensions: 3561 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3443 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3556 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)