ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal34k12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF498270.1| Haynaldia villosa clone kong36 mRNA 567 e-158
2ref|XM_465274.1| Oryza sativa (japonica cultivar-group), mRNA 252 1e-63
3dbj|AK068494.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 3e-61
4gb|AY107525.1| Zea mays PCO115693 mRNA sequence 188 2e-44
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 172 9e-40
6dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic D... 172 9e-40
7gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14... 60 1e-05
8emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroi... 56 1e-04
9gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se... 52 0.002
10gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carbo... 52 0.002
11gb|AY230322.1| Triticum aestivum FCA-A1 (Fca) gene, partial cds 50 0.009
12emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene 50 0.009
13dbj|AB178167.1| Triticum aestivum Wcbf2-2 mRNA for AP2/EREBP typ... 50 0.009
14gb|AF376136.1|AF376136 Triticum aestivum putative CRT/DRE-bindin... 50 0.009
15gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (L... 50 0.009
16gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 50 0.009
17gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carbo... 50 0.009
18emb|CR626933.1| Triticum turgidum 46 0.14
19emb|CR626929.1| Triticum aestivum 46 0.14
20gb|AF277253.1|AF277253 Australopyrum velutinum isolate H6724 dis... 46 0.14
21dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox ... 46 0.14
22gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence 46 0.14
23gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones B... 44 0.57
24gb|AC110508.8| Mus musculus chromosome 3, clone RP23-382L1, comp... 44 0.57
25gb|AF099671.1|AF099671 Secale cereale thaumatin-like protein 2 p... 44 0.57
26gb|AF099670.1|AF099670 Secale cereale thaumatin-like protein 3 p... 44 0.57
27gb|AF096927.1|AF096927 Secale cereale thaumatin-like protein 1 p... 44 0.57
28emb|AL627086.22| Mouse DNA sequence from clone RP23-477P14 on ch... 44 0.57
29gb|AY133248.1| Aegilops tauschii starch synthase II gene, comple... 42 2.2
30emb|CR626934.1| Triticum aestivum 42 2.2
31dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 42 2.2
32dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch syntha... 42 2.2
33emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAR... 42 2.2
34emb|X71654.1|SMCYP71B3 S.melongena CYP71A2 mRNA for hydroxylase 42 2.2
35gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 2.2
36emb|BX001051.29| Zebrafish DNA sequence from clone DKEYP-68F9 in... 42 2.2
37emb|AM000057.1| Hordeum vulgare HKT1 gene for high-affinity sodi... 42 2.2
38dbj|D14990.1|POTCPEG4 Eggplant mRNA for cytochrome P-450EG4, com... 42 2.2
39ref|NM_100363.2| Arabidopsis thaliana nucleic acid binding / zin... 40 8.8
40gb|AC163666.2| Mus musculus BAC clone RP23-46B12 from chromosome... 40 8.8
41gb|AC161809.3| Mus musculus chromosome 1, clone RP23-114N13, com... 40 8.8
42gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 40 8.8
43gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, co... 40 8.8
44gb|AC135409.3| Rattus norvegicus 8 BAC CH230-416D7 (Children's H... 40 8.8
45gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, c... 40 8.8
46gb|AC124495.2| Mus musculus BAC clone RP23-468F5 from chromosome... 40 8.8
47gb|AC122929.4| Mus musculus BAC clone RP23-12A18 from chromosome... 40 8.8
48gb|AC118928.13| Mus musculus chromosome 16, clone RP23-416J10, c... 40 8.8
49emb|AL512601.18| Human DNA sequence from clone RP11-500B3 on chr... 40 8.8
50emb|AL390777.13| Human DNA sequence from clone RP11-301F14 on ch... 40 8.8
51ref|XM_971279.1| PREDICTED: Tribolium castaneum hypothetical pro... 40 8.8
52gb|AC104518.5| Mus Musculus Strain 129S6/SvEvTac chromosome 17 B... 40 8.8
53emb|Z25420.1|GDINCENPB G.domesticus class II INCENP protein mRNA... 40 8.8
54emb|Z25419.1|GDINCENPA G.domesticus class I INCENP protein mRNA,... 40 8.8
55gb|BT000147.1| Arabidopsis thaliana Unknown protein (At1g04850) ... 40 8.8
56gb|AC141480.4| Mus musculus BAC clone RP23-210I6 from chromosome... 40 8.8
57ref|NM_205330.1| Gallus gallus inner centromere protein antigens... 40 8.8
58gb|AC021070.24| Homo sapiens 12 BAC RP11-460N10 (Roswell Park Ca... 40 8.8
59emb|CR607262.1| full-length cDNA clone CS0DC012YG09 of Neuroblas... 40 8.8
60emb|CR604478.1| full-length cDNA clone CS0DC024YC08 of Neuroblas... 40 8.8
61emb|CR600761.1| full-length cDNA clone CS0DD003YI02 of Neuroblas... 40 8.8
62emb|CR596068.1| full-length cDNA clone CS0DD006YF08 of Neuroblas... 40 8.8
63emb|CR593042.1| full-length cDNA clone CS0DC024YB09 of Neuroblas... 40 8.8
64gb|AC087184.7| Mus Musculus Chromosome 3 RP23-403C5, complete se... 40 8.8
65dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 40 8.8
66ref|XM_692368.1| PREDICTED: Danio rerio similar to UPF2 regulato... 40 8.8
67gb|AY062609.1| Arabidopsis thaliana Unknown protein (F13M7.16) m... 40 8.8
68ref|NM_005169.2| Homo sapiens paired-like (aristaless) homeobox ... 40 8.8
69gb|AC151987.4| Mus musculus BAC clone RP23-356C20 from chromosom... 40 8.8
70gb|DQ067256.1| Viola pubescens var. scabriuscula clone Vpub-11 m... 40 8.8
71emb|BX818444.1|CNS0AE4O Arabidopsis thaliana Full-length cDNA Co... 40 8.8
72gb|AC154549.2| Mus musculus BAC clone RP23-443L15 from chromosom... 40 8.8
73gb|AC073551.6| Homo sapiens BAC clone RP11-498C14 from 2, comple... 40 8.8
74gb|AF182067.1|AF182067S1 Mus musculus secretory protein BV8 (Bv8... 40 8.8
75gb|AY088435.1| Arabidopsis thaliana clone 6672 mRNA, complete se... 40 8.8
76gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, ... 40 8.8
77gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F13M7 ... 40 8.8
78gb|AC154676.2| Mus musculus BAC clone RP23-146O19 from 17, compl... 40 8.8
79gb|BC041564.1| Homo sapiens paired-like (aristaless) homeobox 2a... 40 8.8
80gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, co... 40 8.8
81gb|AC097103.8| Homo sapiens 3 BAC RP11-319G6 (Roswell Park Cance... 40 8.8
82emb|CR354610.16| Zebrafish DNA sequence from clone DKEY-29L6 in ... 40 8.8
83emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E ... 40 8.8
84gb|U51561.1|U51561 Homo sapiens cosmid clone N79E2 from 22q12, c... 40 8.8
85gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, co... 40 8.8
86dbj|AP000593.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.8
87emb|BX072552.10| Mouse DNA sequence from clone RP23-147I24 on ch... 40 8.8
88gb|AC118643.6| Mus musculus chromosome 1, clone RP24-113H21, com... 40 8.8
89emb|AL845534.7| Mouse DNA sequence from clone RP23-223C17 on chr... 40 8.8
90gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 8.8
91emb|CT030259.6| Mouse DNA sequence from clone RP24-529L21 on chr... 40 8.8
92gb|AF022723.1|HOMOARIX2 Homo sapiens Arix homeodomain protein (A... 40 8.8
93emb|AL672244.15| Mouse DNA sequence from clone RP23-43I8 on chro... 40 8.8
94emb|CT030710.7| Mouse DNA sequence from clone RP23-386A10 on chr... 40 8.8
95emb|AL671478.9| Mouse DNA sequence from clone RP23-110A15 on chr... 40 8.8
96emb|AL772264.8| Mouse DNA sequence from clone RP23-15I21 on chro... 40 8.8
97emb|AL606908.10| Mouse DNA sequence from clone RP23-273D6 on chr... 40 8.8 
>gb|AF498270.1| Haynaldia villosa clone kong36 mRNA
          Length = 1083

 Score =  567 bits (286), Expect = e-158
 Identities = 422/465 (90%), Gaps = 3/465 (0%)
 Strand = Plus / Minus

                                                                       
Query: 38  gtactacacaagatatacgtatacatgggttttacagagcagcatactggacaggatcac 97
           ||||||||||||||| |||||||||||||   ||| ||||| || || ||||| ||||||
Sbjct: 877 gtactacacaagatacacgtatacatggggcgtactgagcaacagaccggacaagatcac 818

                                                                       
Query: 98  aaagattcttgcttgattgcgcaagaacaactcagggtg--gctctacttgcgccttgcc 155
           ||| ||||||||||| ||||||||| ||||||| |||||  |||||||||||||||||||
Sbjct: 817 aaa-attcttgcttggttgcgcaagcacaactcggggtgtggctctacttgcgccttgcc 759

                                                                       
Query: 156 aatatcggcacggcagtccttgcattttcagaaccggagctctgccgtgaccacgacgac 215
           ||||||||||| |||||||||||| || ||||||||| ||||||||| ||||||||||||
Sbjct: 758 aatatcggcacagcagtccttgcacttccagaaccggtgctctgccgcgaccacgacgac 699

                                                                       
Query: 216 ggcttcgccctgcccgccatcagcgcagacgctgcaatagcttttatattccgcctcttc 275
           ||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 698 ggctttgccctgcccgccatcagcgccgacgctgcactagcttttatattccgcctcttc 639

                                                                       
Query: 276 agcgcgaggtctatcttgccttttgaggctgagccggatggctctgggaagatggaggag 335
           ||||| ||||||| |||| |||| || |||||||| |||||||| ||||||||||||| |
Sbjct: 638 agcgcaaggtctagcttgtctttcgaagctgagcctgatggctccgggaagatggaggcg 579

                                                                       
Query: 336 gccttgatcgccgctctcttgtcctttctgctcttctcgaaatttgaggcgaacctcaca 395
           ||||||||||| |||||||||||||| ||| ||||||||||||| |||||||||||||||
Sbjct: 578 gccttgatcgctgctctcttgtccttcctgttcttctcgaaattcgaggcgaacctcaca 519

                                                                       
Query: 396 cgggctgctgcggacgcatcctctgcggagggtggcagaaggcgtactccaagtcccatc 455
           || ||||| ||||  ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 518 cgagctgcagcggcagcatcctctgcggagggtggcagaaggcgtactccgagccccatc 459

                                                        
Query: 456 ttcctcgctgatttcttctcttcagcaactctcttcttttggctc 500
            ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 458 ctcctcgctgatttcttctcgtcagcaactctcttcttttggctc 414



 Score =  256 bits (129), Expect = 8e-65
 Identities = 145/149 (97%), Gaps = 1/149 (0%)
 Strand = Plus / Minus

                                                                       
Query: 500 cctaaggcggtcgcggagggttctgttcagggaataatcatcggaatgacggctatcaga 559
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 322 cctaaggcggtcgcggagggttctgttcagggaataatcatcagaatgacggctatcaga 263

                                                                       
Query: 560 gaggcgttgaagccgaactaaaacaggctcctcttctttcttcttccgaatatcctctcc 619
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 262 gaggcgttgaagccgaactaaaacaggctcctcttctttcttcttccgaatatcctct-c 204

                                        
Query: 620 cctggtgttcgagcttatacataggatcc 648
           |||||||||| ||||||||||| ||||||
Sbjct: 203 cctggtgttcaagcttatacatgggatcc 175
to top
>ref|XM_465274.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1323

 Score =  252 bits (127), Expect = 1e-63
 Identities = 362/439 (82%), Gaps = 1/439 (0%)
 Strand = Plus / Minus

                                                                        
Query: 210  gacgacggcttcgccctgcccgccatcagcgcagacgctgcaatagcttttatattccgc 269
            |||||||||||| |||||| |||||||||||| || || |||  |||||||||||| |||
Sbjct: 1017 gacgacggcttcaccctgctcgccatcagcgctgaggcagcaccagcttttatatttcgc 958

                                                                        
Query: 270  ctcttcagcgcgaggtctatcttgccttttgaggctgagccggatggctctgggaagatg 329
            |||||||| || || || | ||||   ||||| | |||||  |||| ||| |||||||||
Sbjct: 957  ctcttcagtgcaagatccagcttgttctttgaagttgagcttgatgactccgggaagatg 898

                                                                        
Query: 330  gaggaggccttgatcgccgctctcttgtcctttctgctcttctcgaaatttgaggcgaac 389
            || |  ||||| || || ||||| |||||| ||||||||||||| || ||||| || |||
Sbjct: 897  gaagcagccttaattgctgctcttttgtcccttctgctcttctcaaattttgatgcaaac 838

                                                                        
Query: 390  ctcacacgggctgctgcggacgcatcctctgcggagggtggcagaaggcgtactccaagt 449
             |||||   || ||||| |  ||||| ||||| |||||||| | ||| ||||||||||||
Sbjct: 837  ttcacagaagccgctgcagtggcatcttctgcagagggtggtaaaagccgtactccaagt 778

                                                                        
Query: 450  cccatcttcctcgctgatttcttctcttcagcaactctcttcttttggctcctaaggcgg 509
            |||||||| || |||||| | ||||||||||||||||||||||||||||||||||| || 
Sbjct: 777  cccatctttctagctgatcttttctcttcagcaactctcttcttttggctcctaagacga 718

                                                                        
Query: 510  tcgcggagggttctgttcagggaataatcatcggaatgacggctatcagagaggcgttga 569
            || || |||| |||||| || |  || ||||| ||||| |||||||| ||||| ||||||
Sbjct: 717  tcacgaagggctctgttaagagcgtagtcatcagaatgccggctatcggagagtcgttga 658

                                                                        
Query: 570  agccgaactaaaacaggctcctcttctttcttcttccgaatatcctctcccctggtgttc 629
            || ||||||||||| || ||  |||||||||||||   || |||||||  ||||||||||
Sbjct: 657  aggcgaactaaaactggttcagcttctttcttctttttaagatcctct-tcctggtgttc 599

                               
Query: 630  gagcttatacataggatcc 648
             ||||||||||||||||||
Sbjct: 598  aagcttatacataggatcc 580
to top
>dbj|AK068494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156M22, full
            insert sequence
          Length = 1323

 Score =  244 bits (123), Expect = 3e-61
 Identities = 361/439 (82%), Gaps = 1/439 (0%)
 Strand = Plus / Minus

                                                                        
Query: 210  gacgacggcttcgccctgcccgccatcagcgcagacgctgcaatagcttttatattccgc 269
            |||||||||||| |||||| |||||||||||| || || |||  |||||||||||| |||
Sbjct: 1017 gacgacggcttcaccctgctcgccatcagcgctgaggcagcaccagcttttatatttcgc 958

                                                                        
Query: 270  ctcttcagcgcgaggtctatcttgccttttgaggctgagccggatggctctgggaagatg 329
            |||||||| || || || | ||||   ||||| | |||||  |||| ||| |||||||||
Sbjct: 957  ctcttcagtgcaagatccagcttgttctttgaagttgagcttgatgactccgggaagatg 898

                                                                        
Query: 330  gaggaggccttgatcgccgctctcttgtcctttctgctcttctcgaaatttgaggcgaac 389
            || |  ||||| || || ||||| |||||| ||||||||||||| || ||||| || |||
Sbjct: 897  gaagcagccttaattgctgctcttttgtcccttctgctcttctcaaattttgatgcaaac 838

                                                                        
Query: 390  ctcacacgggctgctgcggacgcatcctctgcggagggtggcagaaggcgtactccaagt 449
             |||||   || ||||| |  ||||| ||||| |||||||| | ||| ||||||||||||
Sbjct: 837  ttcacagaagccgctgcagtggcatcttctgcagagggtggtaaaagccgtactccaagt 778

                                                                        
Query: 450  cccatcttcctcgctgatttcttctcttcagcaactctcttcttttggctcctaaggcgg 509
            |||||||| || |||||| | ||||||||||||||||||||||||||||||||||| || 
Sbjct: 777  cccatctttctagctgatcttttctcttcagcaactctcttcttttggctcctaagacga 718

                                                                        
Query: 510  tcgcggagggttctgttcagggaataatcatcggaatgacggctatcagagaggcgttga 569
            || || |||| |||||| || |  || ||||| ||||| |||||| | ||||| ||||||
Sbjct: 717  tcacgaagggctctgttaagagcgtagtcatcagaatgccggctaccggagagtcgttga 658

                                                                        
Query: 570  agccgaactaaaacaggctcctcttctttcttcttccgaatatcctctcccctggtgttc 629
            || ||||||||||| || ||  |||||||||||||   || |||||||  ||||||||||
Sbjct: 657  aggcgaactaaaactggttcagcttctttcttctttttaagatcctct-tcctggtgttc 599

                               
Query: 630  gagcttatacataggatcc 648
             ||||||||||||||||||
Sbjct: 598  aagcttatacataggatcc 580
to top
>gb|AY107525.1| Zea mays PCO115693 mRNA sequence
          Length = 726

 Score =  188 bits (95), Expect = 2e-44
 Identities = 357/443 (80%), Gaps = 1/443 (0%)
 Strand = Plus / Minus

                                                                       
Query: 206 ccacgacgacggcttcgccctgcccgccatcagcgcagacgctgcaatagcttttatatt 265
           |||||| ||||||||| ||||||| |||||||| || |  || ||   ||||||||| ||
Sbjct: 521 ccacgaggacggcttcaccctgcctgccatcagtgctgtagcggctccagcttttatgtt 462

                                                                       
Query: 266 ccgcctcttcagcgcgaggtctatcttgccttttgaggctgagccggatggctctgggaa 325
           ||||||||||||| |||||||    || || | ||| |||||||  |||| ||| || ||
Sbjct: 461 ccgcctcttcagcacgaggtcgggtttaccatgtgatgctgagcttgatgactccggaaa 402

                                                                       
Query: 326 gatggaggaggccttgatcgccgctctcttgtcctttctgctcttctcgaaatttgaggc 385
           ||||||||  || ||||| || || ||||| ||| ||||||| ||||| || || || ||
Sbjct: 401 gatggaggcagctttgattgcggccctcttatcccttctgcttttctcaaatttcgatgc 342

                                                                       
Query: 386 gaacctcacacgggctgctgcggacgcatcctctgcggagggtggcagaaggcgtactcc 445
            ||| ||||    || |||||||  ||||| ||||||||||| ||||  || || || ||
Sbjct: 341 aaacttcactgaagccgctgcggcggcatcttctgcggagggaggcaagagccgcacacc 282

                                                                       
Query: 446 aagtcccatcttcctcgctgatttcttctcttcagcaactctcttcttttggctcctaag 505
           ||| || ||||| ||||| || ||||||||||||||||||| ||| ||||||||||| ||
Sbjct: 281 aaggcctatctttctcgcggacttcttctcttcagcaactcgctttttttggctcctgag 222

                                                                       
Query: 506 gcggtcgcggagggttctgttcagggaataatcatcggaatgacggctatcagagaggcg 565
            || |||||||| | ||||||||||| ||||||||| || || ||||| || ||||| ||
Sbjct: 221 acgatcgcggagtgctctgttcagggcataatcatcagagtgccggctgtctgagagtcg 162

                                                                       
Query: 566 ttgaagccgaactaaaacaggctcctcttctttcttcttccgaatatcctctcccctggt 625
            ||||| ||||||||||| |||||  ||||||| |||||||||| |||||||  ||||||
Sbjct: 161 ctgaaggcgaactaaaactggctcagcttcttttttcttccgaagatcctct-tcctggt 103

                                  
Query: 626 gttcgagcttatacataggatcc 648
           |||| |||  |||||||||||||
Sbjct: 102 gttcaagccgatacataggatcc 80
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  172 bits (87), Expect = 9e-40
 Identities = 240/291 (82%)
 Strand = Plus / Minus

                                                                            
Query: 210      gacgacggcttcgccctgcccgccatcagcgcagacgctgcaatagcttttatattccgc 269
                |||||||||||| |||||| |||||||||||| || || |||  |||||||||||| |||
Sbjct: 13011838 gacgacggcttcaccctgctcgccatcagcgctgaggcagcaccagcttttatatttcgc 13011779

                                                                            
Query: 270      ctcttcagcgcgaggtctatcttgccttttgaggctgagccggatggctctgggaagatg 329
                |||||||| || || || | ||||   ||||| | |||||  |||| ||| |||||||||
Sbjct: 13011778 ctcttcagtgcaagatccagcttgttctttgaagttgagcttgatgactccgggaagatg 13011719

                                                                            
Query: 330      gaggaggccttgatcgccgctctcttgtcctttctgctcttctcgaaatttgaggcgaac 389
                || |  ||||| || || ||||| |||||| ||||||||||||| || ||||| || |||
Sbjct: 13011718 gaagcagccttaattgctgctcttttgtcccttctgctcttctcaaattttgatgcaaac 13011659

                                                                            
Query: 390      ctcacacgggctgctgcggacgcatcctctgcggagggtggcagaaggcgtactccaagt 449
                 |||||   || ||||| |  ||||| ||||| |||||||| | ||| ||||||||||||
Sbjct: 13011658 ttcacagaagccgctgcagtggcatcttctgcagagggtggtaaaagccgtactccaagt 13011599

                                                                   
Query: 450      cccatcttcctcgctgatttcttctcttcagcaactctcttcttttggctc 500
                |||||||| || |||||| | ||||||||||||||||||||||||||||||
Sbjct: 13011598 cccatctttctagctgatcttttctcttcagcaactctcttcttttggctc 13011548



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 96/112 (85%), Gaps = 1/112 (0%)
 Strand = Plus / Minus

                                                                            
Query: 537      tcatcggaatgacggctatcagagaggcgttgaagccgaactaaaacaggctcctcttct 596
                ||||| ||||| |||||||| ||||| |||||||| ||||||||||| || ||  |||||
Sbjct: 13011421 tcatcagaatgccggctatcggagagtcgttgaaggcgaactaaaactggttcagcttct 13011362

                                                                    
Query: 597      ttcttcttccgaatatcctctcccctggtgttcgagcttatacataggatcc 648
                ||||||||   || |||||||  |||||||||| ||||||||||||||||||
Sbjct: 13011361 ttcttctttttaagatcctct-tcctggtgttcaagcttatacataggatcc 13011311
to top
>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0688H12
          Length = 139279

 Score =  172 bits (87), Expect = 9e-40
 Identities = 240/291 (82%)
 Strand = Plus / Minus

                                                                          
Query: 210    gacgacggcttcgccctgcccgccatcagcgcagacgctgcaatagcttttatattccgc 269
              |||||||||||| |||||| |||||||||||| || || |||  |||||||||||| |||
Sbjct: 121481 gacgacggcttcaccctgctcgccatcagcgctgaggcagcaccagcttttatatttcgc 121422

                                                                          
Query: 270    ctcttcagcgcgaggtctatcttgccttttgaggctgagccggatggctctgggaagatg 329
              |||||||| || || || | ||||   ||||| | |||||  |||| ||| |||||||||
Sbjct: 121421 ctcttcagtgcaagatccagcttgttctttgaagttgagcttgatgactccgggaagatg 121362

                                                                          
Query: 330    gaggaggccttgatcgccgctctcttgtcctttctgctcttctcgaaatttgaggcgaac 389
              || |  ||||| || || ||||| |||||| ||||||||||||| || ||||| || |||
Sbjct: 121361 gaagcagccttaattgctgctcttttgtcccttctgctcttctcaaattttgatgcaaac 121302

                                                                          
Query: 390    ctcacacgggctgctgcggacgcatcctctgcggagggtggcagaaggcgtactccaagt 449
               |||||   || ||||| |  ||||| ||||| |||||||| | ||| ||||||||||||
Sbjct: 121301 ttcacagaagccgctgcagtggcatcttctgcagagggtggtaaaagccgtactccaagt 121242

                                                                 
Query: 450    cccatcttcctcgctgatttcttctcttcagcaactctcttcttttggctc 500
              |||||||| || |||||| | ||||||||||||||||||||||||||||||
Sbjct: 121241 cccatctttctagctgatcttttctcttcagcaactctcttcttttggctc 121191



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 96/112 (85%), Gaps = 1/112 (0%)
 Strand = Plus / Minus

                                                                          
Query: 537    tcatcggaatgacggctatcagagaggcgttgaagccgaactaaaacaggctcctcttct 596
              ||||| ||||| |||||||| ||||| |||||||| ||||||||||| || ||  |||||
Sbjct: 121064 tcatcagaatgccggctatcggagagtcgttgaaggcgaactaaaactggttcagcttct 121005

                                                                  
Query: 597    ttcttcttccgaatatcctctcccctggtgttcgagcttatacataggatcc 648
              ||||||||   || |||||||  |||||||||| ||||||||||||||||||
Sbjct: 121004 ttcttctttttaagatcctct-tcctggtgttcaagcttatacataggatcc 120954
to top
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence
          Length = 153766

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 1    agtgatctaaacactcttatattaatttaaagagggngtac 41
            |||||||||||||||||||||||| |||| |||||| ||||
Sbjct: 6356 agtgatctaaacactcttatattagtttacagagggagtac 6316



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 1    agtgatctaaacactcttatattaatttaaagagggngtact 42
            |||||||||||| ||||||||||| ||||  ||||| |||||
Sbjct: 6362 agtgatctaaacgctcttatattagtttacggagggagtact 6403
to top
>emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroindoline a, cultivar PI 393494
          Length = 2570

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 1    agtgatctaaacactcttatattaatttaaagagggngtacta 43
            |||||||||||| ||||||||||| |||| |||||| ||||||
Sbjct: 1428 agtgatctaaacgctcttatattagtttacagagggagtacta 1386
to top
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 1   agtgatctaaacactcttatattaatttaaagagggngtac 41
           ||||||| |||||||||||||||||||||  ||||| ||||
Sbjct: 789 agtgatcaaaacactcttatattaatttacggagggagtac 829



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 1   agtgatctaaacactcttatattaattta 29
           |||||||||||| ||||||||||| ||||
Sbjct: 783 agtgatctaaacgctcttatattagttta 755
to top
>gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carboxylase (Acc-1,1) gene,
            nuclear gene encoding plastid protein, partial cds
          Length = 9285

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 1    agtgatctaaacactcttatattaatttaaagagggngtac 41
            |||||||||||||||||||||||  |||| |||||| ||||
Sbjct: 6427 agtgatctaaacactcttatattggtttacagagggagtac 6467
to top
>gb|AY230322.1| Triticum aestivum FCA-A1 (Fca) gene, partial cds
          Length = 9585

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 8    taaacactcttatattaatttaaagagggngtacta 43
            ||||||||||||||||||||||  ||||| ||||||
Sbjct: 9214 taaacactcttatattaatttacggagggagtacta 9249
to top
>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene
          Length = 10815

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 1    agtgatctaaacactcttatattaatttaaagagggngta 40
            |||||||||||| ||||||||||| |||| |||||| |||
Sbjct: 7580 agtgatctaaacgctcttatattagtttacagagggagta 7619



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    agtgatctaaacactcttatatta 24
            |||||||||||| |||||||||||
Sbjct: 7574 agtgatctaaacgctcttatatta 7551
to top
>dbj|AB178167.1| Triticum aestivum Wcbf2-2 mRNA for AP2/EREBP type transcription
           factor, complete cds
          Length = 941

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 1   agtgatctaaacactcttatattaattta 29
           |||||||||||||||||||||||| ||||
Sbjct: 783 agtgatctaaacactcttatattagttta 811
to top
>gb|AF376136.1|AF376136 Triticum aestivum putative CRT/DRE-binding factor (CBF1) mRNA,
           complete cds
          Length = 800

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 1   agtgatctaaacactcttatattaa 25
           |||||||||||||||||||||||||
Sbjct: 740 agtgatctaaacactcttatattaa 764
to top
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and
             LRK19 (Lrk19) genes, complete cds
          Length = 35872

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 1     agtgatctaaacactcttatattaatttaaagagggngta 40
             |||||||||||| |||||||||| ||||| |||||| |||
Sbjct: 21692 agtgatctaaacgctcttatatttatttacagagggagta 21653



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 1     agtgatctaaacactcttatattaatttaaagagggngta 40
             |||||||||||| ||||||||||  |||| |||||| |||
Sbjct: 21698 agtgatctaaacgctcttatatttctttacagagggagta 21737
to top
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13,
             complete sequence
          Length = 102842

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 5     atctaaacactcttatattaatttaaagagggngta 40
             |||||||||||||||||||| |||| |||||| |||
Sbjct: 34545 atctaaacactcttatattagtttacagagggagta 34510
to top
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase
           (RUBISCO) gene, exons 1 and 2
          Length = 2205

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 1   agtgatctaaacactcttatattaattta 29
           ||||||||||||||||||||||| |||||
Sbjct: 107 agtgatctaaacactcttatatttattta 79
to top
>emb|CR626933.1| Triticum turgidum
          Length = 25216

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 1     agtgatctaaacactcttatattaatttaaagagggngtact 42
             ||||||||||| |||||||||||  |||| |||||| |||||
Sbjct: 11717 agtgatctaaatactcttatatttctttatagagggagtact 11758
to top
>emb|CR626929.1| Triticum aestivum
          Length = 20745

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 1     agtgatctaaacactcttatattaatttaaagagggngtact 42
             ||||||||||| |||||||||||  |||| |||||| |||||
Sbjct: 14435 agtgatctaaatactcttatatttctttatagagggagtact 14476
to top
>gb|AF277253.1|AF277253 Australopyrum velutinum isolate H6724 disrupted meiotic cDNA 1
           protein (DMC1) gene, partial cds
          Length = 1062

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 1   agtgatctaaacactcttatattaatttaaagagggngtact 42
           |||||||||||| ||||||||||  |||| |||||| |||||
Sbjct: 844 agtgatctaaacgctcttatatttctttacagagggagtact 885
to top
>dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox protein, complete cds
          Length = 9755

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 1    agtgatctaaacactcttatatt 23
            |||||||||||||||||||||||
Sbjct: 8008 agtgatctaaacactcttatatt 7986
to top
>gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence
          Length = 1082

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 1    agtgatctaaacactcttatattaatttaaagagggngtact 42
            |||||||||||  ||||||||||| |||| |||||| |||||
Sbjct: 987  agtgatctaaaagctcttatattagtttacagagggagtact 1028



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 6   tctaaacactcttatattaatttaaagagggngtac 41
           ||||||| ||||||||||| ||||| ||||| ||||
Sbjct: 969 tctaaacgctcttatattagtttaaggagggagtac 934
to top
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus
              region
          Length = 160897

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 8      taaacactcttatattaatttaaagagggngta 40
              ||||||||||||||||| |||| |||||| |||
Sbjct: 150244 taaacactcttatattagtttacagagggagta 150276
to top
>gb|AC110508.8| Mus musculus chromosome 3, clone RP23-382L1, complete sequence
          Length = 224790

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 581    aacaggctcctcttctttcttcttcc 606
              |||| |||||||||||||||||||||
Sbjct: 124326 aacacgctcctcttctttcttcttcc 124301
to top
>gb|AF099671.1|AF099671 Secale cereale thaumatin-like protein 2 precursor (TLP2) mRNA,
           complete cds
          Length = 975

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 1   agtgatctaaacactcttatattaatttaaagagggngtac 41
           |||| ||||||||||||||||||| ||||  ||||| ||||
Sbjct: 685 agtgttctaaacactcttatattagtttacggagggagtac 725
to top
>gb|AF099670.1|AF099670 Secale cereale thaumatin-like protein 3 precursor (TLP3) gene,
           complete cds
          Length = 1003

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 1   agtgatctaaacactcttatattaatttaaagagggngtac 41
           |||| ||||||||||||||||||| ||||  ||||| ||||
Sbjct: 777 agtgttctaaacactcttatattagtttacggagggagtac 817
to top
>gb|AF096927.1|AF096927 Secale cereale thaumatin-like protein 1 precursor (TLP1) mRNA,
           complete cds
          Length = 1151

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 1   agtgatctaaacactcttatattaatttaaagagggngtac 41
           |||| ||||||||||||||||||| ||||  ||||| ||||
Sbjct: 675 agtgttctaaacactcttatattagtttacggagggagtac 715
to top
>emb|AL627086.22| Mouse DNA sequence from clone RP23-477P14 on chromosome 3, complete
             sequence
          Length = 106019

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 581   aacaggctcctcttctttcttcttcc 606
             |||| |||||||||||||||||||||
Sbjct: 86654 aacacgctcctcttctttcttcttcc 86629
to top
>gb|AY133248.1| Aegilops tauschii starch synthase II gene, complete cds
          Length = 9024

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 5    atctaaacactcttatattaattta 29
            |||||||| ||||||||||||||||
Sbjct: 2846 atctaaacgctcttatattaattta 2822
to top
>emb|CR626934.1| Triticum aestivum
          Length = 94398

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 1     agtgatctaaacactcttatattaattta 29
             |||||||||||| ||||||||||| ||||
Sbjct: 47985 agtgatctaaacgctcttatattatttta 47957
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 217     gcttcgccctgcccgccatcagcgc 241
               ||||||||||| |||||||||||||
Sbjct: 4410692 gcttcgccctggccgccatcagcgc 4410716
to top
>dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch synthase II-D, complete cds
          Length = 7010

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 5    atctaaacactcttatattaattta 29
            |||||||| ||||||||||||||||
Sbjct: 1602 atctaaacgctcttatattaattta 1578
to top
>emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAROUS1, exons 1-6
          Length = 4034

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 1    agtgatctaaacactcttatattaatttaaagagggngta 40
            |||||||||||  ||||||||||| |||| |||||| |||
Sbjct: 2756 agtgatctaaatgctcttatattagtttacagagggagta 2795
to top
>emb|X71654.1|SMCYP71B3 S.melongena CYP71A2 mRNA for hydroxylase
          Length = 1747

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 591 tcttctttcttcttccgaata 611
           |||||||||||||||||||||
Sbjct: 832 tcttctttcttcttccgaata 812
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 217     gcttcgccctgcccgccatcagcgc 241
               ||||||||||| |||||||||||||
Sbjct: 4412383 gcttcgccctggccgccatcagcgc 4412407
to top
>emb|BX001051.29| Zebrafish DNA sequence from clone DKEYP-68F9 in linkage group 9, complete
              sequence
          Length = 213486

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 4      gatctaaacactcttatattaattt 28
              |||||||||| ||||||||||||||
Sbjct: 185976 gatctaaacattcttatattaattt 185952
to top
>emb|AM000057.1| Hordeum vulgare HKT1 gene for high-affinity sodium transporter, exons
            1-3
          Length = 2155

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 5    atctaaacactcttatattaatttaaagagggngta 40
            |||||||| ||||||||||| |||| |||||| |||
Sbjct: 1303 atctaaacgctcttatattagtttacagagggagta 1338
to top
>dbj|D14990.1|POTCPEG4 Eggplant mRNA for cytochrome P-450EG4, complete cds
          Length = 1744

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 591 tcttctttcttcttccgaata 611
           |||||||||||||||||||||
Sbjct: 832 tcttctttcttcttccgaata 812
to top
>ref|NM_100363.2| Arabidopsis thaliana nucleic acid binding / zinc ion binding
           AT1G04850 mRNA, complete cds
          Length = 1521

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 588 tcctcttctttcttcttccg 607
           ||||||||||||||||||||
Sbjct: 683 tcctcttctttcttcttccg 664
to top
>gb|AC163666.2| Mus musculus BAC clone RP23-46B12 from chromosome 9, complete sequence
          Length = 213408

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 463   ctgatttcttctcttcagca 482
             ||||||||||||||||||||
Sbjct: 57483 ctgatttcttctcttcagca 57464
to top
>gb|AC161809.3| Mus musculus chromosome 1, clone RP23-114N13, complete sequence
          Length = 213778

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 587   ctcctcttctttcttcttcc 606
             ||||||||||||||||||||
Sbjct: 24777 ctcctcttctttcttcttcc 24796
to top
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 2      gtgatctaaacactcttatattaattta 29
              ||||||||||| ||||||||||| ||||
Sbjct: 177698 gtgatctaaactctcttatattagttta 177671
to top
>gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, complete sequence
          Length = 166568

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 587    ctcctcttctttcttcttcc 606
              ||||||||||||||||||||
Sbjct: 130917 ctcctcttctttcttcttcc 130898
to top
>gb|AC135409.3| Rattus norvegicus 8 BAC CH230-416D7 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 231716

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    gcagtccttgcattttcaga 187
              ||||||||||||||||||||
Sbjct: 144129 gcagtccttgcattttcaga 144110
to top
>gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, complete sequence
          Length = 222382

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 348    gctctcttgtcctttctgct 367
              ||||||||||||||||||||
Sbjct: 155063 gctctcttgtcctttctgct 155082
to top
>gb|AC124495.2| Mus musculus BAC clone RP23-468F5 from chromosome 1, complete sequence
          Length = 182578

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 587   ctcctcttctttcttcttcc 606
             ||||||||||||||||||||
Sbjct: 76048 ctcctcttctttcttcttcc 76029
to top
>gb|AC122929.4| Mus musculus BAC clone RP23-12A18 from chromosome 6, complete sequence
          Length = 252503

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    tggctctgggaagatggagg 333
              ||||||||||||||||||||
Sbjct: 130373 tggctctgggaagatggagg 130354
to top
>gb|AC118928.13| Mus musculus chromosome 16, clone RP23-416J10, complete sequence
          Length = 238516

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 587   ctcctcttctttcttcttcc 606
             ||||||||||||||||||||
Sbjct: 98883 ctcctcttctttcttcttcc 98864
to top
>emb|AL512601.18| Human DNA sequence from clone RP11-500B3 on chromosome 9 Contains the
            5' end of a novel gene, complete sequence
          Length = 165517

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 587  ctcctcttctttcttcttcc 606
            ||||||||||||||||||||
Sbjct: 9179 ctcctcttctttcttcttcc 9198
to top
>emb|AL390777.13| Human DNA sequence from clone RP11-301F14 on chromosome 9 Contains the
             5' end of the NTRK2 gene for Neurotrophic tyrosine kinase,
             receptor, type 2 (TRKB) and a CpG island, complete
             sequence
          Length = 182914

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 587   ctcctcttctttcttcttcc 606
             ||||||||||||||||||||
Sbjct: 78868 ctcctcttctttcttcttcc 78887
to top
>ref|XM_971279.1| PREDICTED: Tribolium castaneum hypothetical protein LOC661110
           (LOC661110), mRNA
          Length = 627

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 587 ctcctcttctttcttcttcc 606
           ||||||||||||||||||||
Sbjct: 236 ctcctcttctttcttcttcc 217



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 587 ctcctcttctttcttcttcc 606
           ||||||||||||||||||||
Sbjct: 52  ctcctcttctttcttcttcc 33
to top
>gb|AC104518.5| Mus Musculus Strain 129S6/SvEvTac chromosome 17 BAC, RP22-187D17,
             Complete Sequence, complete sequence
          Length = 163367

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   gctctcttgtcctttctgct 367
             ||||||||||||||||||||
Sbjct: 60826 gctctcttgtcctttctgct 60807
to top
>emb|Z25420.1|GDINCENPB G.domesticus class II INCENP protein mRNA, complete CDS
          Length = 4354

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 586  gctcctcttctttcttcttc 605
            ||||||||||||||||||||
Sbjct: 1954 gctcctcttctttcttcttc 1935
to top
>emb|Z25419.1|GDINCENPA G.domesticus class I INCENP protein mRNA, complete CDS
          Length = 4481

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 586  gctcctcttctttcttcttc 605
            ||||||||||||||||||||
Sbjct: 1954 gctcctcttctttcttcttc 1935
to top
>gb|BT000147.1| Arabidopsis thaliana Unknown protein (At1g04850) mRNA, complete cds
          Length = 1356

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 588 tcctcttctttcttcttccg 607
           ||||||||||||||||||||
Sbjct: 596 tcctcttctttcttcttccg 577
to top
>gb|AC141480.4| Mus musculus BAC clone RP23-210I6 from chromosome 3, complete sequence
          Length = 209458

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 587   ctcctcttctttcttcttcc 606
             ||||||||||||||||||||
Sbjct: 37161 ctcctcttctttcttcttcc 37180
to top
>ref|NM_205330.1| Gallus gallus inner centromere protein antigens 135/155kDa (INCENP),
            mRNA
          Length = 4481

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 586  gctcctcttctttcttcttc 605
            ||||||||||||||||||||
Sbjct: 1954 gctcctcttctttcttcttc 1935
to top
>gb|AC021070.24| Homo sapiens 12 BAC RP11-460N10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 162978

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   ttcagcaactctcttctttt 495
             ||||||||||||||||||||
Sbjct: 78865 ttcagcaactctcttctttt 78846
to top
>emb|CR607262.1| full-length cDNA clone CS0DC012YG09 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1649

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 gccggatggctctgggaaga 327
           ||||||||||||||||||||
Sbjct: 392 gccggatggctctgggaaga 373
to top
>emb|CR604478.1| full-length cDNA clone CS0DC024YC08 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1284

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 gccggatggctctgggaaga 327
           ||||||||||||||||||||
Sbjct: 37  gccggatggctctgggaaga 18
to top
>emb|CR600761.1| full-length cDNA clone CS0DD003YI02 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 1658

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 gccggatggctctgggaaga 327
           ||||||||||||||||||||
Sbjct: 394 gccggatggctctgggaaga 375
to top
>emb|CR596068.1| full-length cDNA clone CS0DD006YF08 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 1651

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 gccggatggctctgggaaga 327
           ||||||||||||||||||||
Sbjct: 398 gccggatggctctgggaaga 379
to top
>emb|CR593042.1| full-length cDNA clone CS0DC024YB09 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1663

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 gccggatggctctgggaaga 327
           ||||||||||||||||||||
Sbjct: 394 gccggatggctctgggaaga 375
to top
>gb|AC087184.7| Mus Musculus Chromosome 3 RP23-403C5, complete sequence
          Length = 206400

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 587    ctcctcttctttcttcttcc 606
              ||||||||||||||||||||
Sbjct: 165411 ctcctcttctttcttcttcc 165392



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 587    ctcctcttctttcttcttcc 606
              ||||||||||||||||||||
Sbjct: 165386 ctcctcttctttcttcttcc 165367
to top
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102
          Length = 1779707

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 459    ctcgctgatttcttctcttc 478
              ||||||||||||||||||||
Sbjct: 850351 ctcgctgatttcttctcttc 850370
to top
>ref|XM_692368.1| PREDICTED: Danio rerio similar to UPF2 regulator of nonsense
           transcripts homolog (LOC569006), partial mRNA
          Length = 2532

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 587 ctcctcttctttcttcttcc 606
           ||||||||||||||||||||
Sbjct: 231 ctcctcttctttcttcttcc 212
to top
>gb|AY062609.1| Arabidopsis thaliana Unknown protein (F13M7.16) mRNA, complete cds
          Length = 1412

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 588 tcctcttctttcttcttccg 607
           ||||||||||||||||||||
Sbjct: 629 tcctcttctttcttcttccg 610
to top
>ref|NM_005169.2| Homo sapiens paired-like (aristaless) homeobox 2a (PHOX2A), mRNA
          Length = 1700

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 gccggatggctctgggaaga 327
           ||||||||||||||||||||
Sbjct: 405 gccggatggctctgggaaga 386
to top
>gb|AC151987.4| Mus musculus BAC clone RP23-356C20 from chromosome 17, complete sequence
          Length = 245262

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      tgatctaaacactcttatat 22
              ||||||||||||||||||||
Sbjct: 166311 tgatctaaacactcttatat 166330
to top
>gb|DQ067256.1| Viola pubescens var. scabriuscula clone Vpub-11 microsatellite
           sequence
          Length = 581

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 587 ctcctcttctttcttcttcc 606
           ||||||||||||||||||||
Sbjct: 271 ctcctcttctttcttcttcc 290
to top
>emb|BX818444.1|CNS0AE4O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZC12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1464

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 588 tcctcttctttcttcttccg 607
           ||||||||||||||||||||
Sbjct: 661 tcctcttctttcttcttccg 642
to top
>gb|AC154549.2| Mus musculus BAC clone RP23-443L15 from chromosome 17, complete sequence
          Length = 191523

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      tgatctaaacactcttatat 22
              ||||||||||||||||||||
Sbjct: 108934 tgatctaaacactcttatat 108915
to top
>gb|AC073551.6| Homo sapiens BAC clone RP11-498C14 from 2, complete sequence
          Length = 49028

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   gctgcaatagcttttatatt 265
             ||||||||||||||||||||
Sbjct: 41847 gctgcaatagcttttatatt 41828
to top
>gb|AF182067.1|AF182067S1 Mus musculus secretory protein BV8 (Bv8) gene, exons 1 and 2
          Length = 12920

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  tggctctgggaagatggagg 333
            ||||||||||||||||||||
Sbjct: 6954 tggctctgggaagatggagg 6935
to top
>gb|AY088435.1| Arabidopsis thaliana clone 6672 mRNA, complete sequence
          Length = 1519

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 588 tcctcttctttcttcttccg 607
           ||||||||||||||||||||
Sbjct: 683 tcctcttctttcttcttccg 664
to top
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
          Length = 108608

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 8     taaacactcttatattaatttaaagagg 35
             ||||| |||||||||||||||| |||||
Sbjct: 73089 taaacgctcttatattaatttatagagg 73116
to top
>gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F13M7 sequence, complete sequence
          Length = 89713

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 588   tcctcttctttcttcttccg 607
             ||||||||||||||||||||
Sbjct: 55963 tcctcttctttcttcttccg 55944
to top
>gb|AC154676.2| Mus musculus BAC clone RP23-146O19 from 17, complete sequence
          Length = 180352

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     tgatctaaacactcttatat 22
             ||||||||||||||||||||
Sbjct: 40584 tgatctaaacactcttatat 40565
to top
>gb|BC041564.1| Homo sapiens paired-like (aristaless) homeobox 2a, mRNA (cDNA clone
           MGC:52227 IMAGE:5923445), complete cds
          Length = 1698

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 gccggatggctctgggaaga 327
           ||||||||||||||||||||
Sbjct: 403 gccggatggctctgggaaga 384
to top
>gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, complete sequence
          Length = 165190

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 348    gctctcttgtcctttctgct 367
              ||||||||||||||||||||
Sbjct: 149162 gctctcttgtcctttctgct 149143
to top
>gb|AC097103.8| Homo sapiens 3 BAC RP11-319G6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 87000

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 587   ctcctcttctttcttcttcc 606
             ||||||||||||||||||||
Sbjct: 62343 ctcctcttctttcttcttcc 62324
to top
>emb|CR354610.16| Zebrafish DNA sequence from clone DKEY-29L6 in linkage group 13,
            complete sequence
          Length = 113182

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 350  tctcttgtcctttctgctcttctc 373
            |||||| |||||||||||||||||
Sbjct: 4045 tctcttctcctttctgctcttctc 4068
to top
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5)
          Length = 2199546

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 61      catgggttttacagagcagc 80
               ||||||||||||||||||||
Sbjct: 1731591 catgggttttacagagcagc 1731572
to top
>gb|U51561.1|U51561 Homo sapiens cosmid clone N79E2 from 22q12, complete sequence
          Length = 39683

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    tcttatattaatttaaagag 34
             ||||||||||||||||||||
Sbjct: 35567 tcttatattaatttaaagag 35586
to top
>gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, complete sequence
          Length = 178509

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 587    ctcctcttctttcttcttcc 606
              ||||||||||||||||||||
Sbjct: 112664 ctcctcttctttcttcttcc 112645
to top
>dbj|AP000593.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-4J8, complete
             sequence
          Length = 124635

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   gccggatggctctgggaaga 327
             ||||||||||||||||||||
Sbjct: 30118 gccggatggctctgggaaga 30137
to top
>emb|BX072552.10| Mouse DNA sequence from clone RP23-147I24 on chromosome X, complete
             sequence
          Length = 160230

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 466   atttcttctcttcagcaactctct 489
             ||||||||||| ||||||||||||
Sbjct: 26709 atttcttctctccagcaactctct 26732
to top
>gb|AC118643.6| Mus musculus chromosome 1, clone RP24-113H21, complete sequence
          Length = 184206

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 587   ctcctcttctttcttcttcc 606
             ||||||||||||||||||||
Sbjct: 45083 ctcctcttctttcttcttcc 45102
to top
>emb|AL845534.7| Mouse DNA sequence from clone RP23-223C17 on chromosome 2, complete
             sequence
          Length = 191379

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 587   ctcctcttctttcttcttcc 606
             ||||||||||||||||||||
Sbjct: 12471 ctcctcttctttcttcttcc 12490
to top
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 221     cgccctgcccgccatcagcg 240
               ||||||||||||||||||||
Sbjct: 3400711 cgccctgcccgccatcagcg 3400692
to top
>emb|CT030259.6| Mouse DNA sequence from clone RP24-529L21 on chromosome 9, complete
              sequence
          Length = 196590

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 463    ctgatttcttctcttcagca 482
              ||||||||||||||||||||
Sbjct: 184365 ctgatttcttctcttcagca 184346
to top
>gb|AF022723.1|HOMOARIX2 Homo sapiens Arix homeodomain protein (ARIX) gene, exon 2
          Length = 510

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 gccggatggctctgggaaga 327
           ||||||||||||||||||||
Sbjct: 210 gccggatggctctgggaaga 191
to top
>emb|AL672244.15| Mouse DNA sequence from clone RP23-43I8 on chromosome 16, complete
              sequence
          Length = 243114

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 587    ctcctcttctttcttcttcc 606
              ||||||||||||||||||||
Sbjct: 175929 ctcctcttctttcttcttcc 175948
to top
>emb|CT030710.7| Mouse DNA sequence from clone RP23-386A10 on chromosome 9, complete
             sequence
          Length = 206562

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   ctgatttcttctcttcagca 482
             ||||||||||||||||||||
Sbjct: 65180 ctgatttcttctcttcagca 65199
to top
>emb|AL671478.9| Mouse DNA sequence from clone RP23-110A15 on chromosome X, complete
            sequence
          Length = 208695

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 587  ctcctcttctttcttcttcc 606
            ||||||||||||||||||||
Sbjct: 5673 ctcctcttctttcttcttcc 5692
to top
>emb|AL772264.8| Mouse DNA sequence from clone RP23-15I21 on chromosome 2, complete
             sequence
          Length = 189540

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 587   ctcctcttctttcttcttcc 606
             ||||||||||||||||||||
Sbjct: 20214 ctcctcttctttcttcttcc 20195
to top
>emb|AL606908.10| Mouse DNA sequence from clone RP23-273D6 on chromosome 4, complete
             sequence
          Length = 212360

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 586   gctcctcttctttcttcttc 605
             ||||||||||||||||||||
Sbjct: 75791 gctcctcttctttcttcttc 75772


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,758,933
Number of Sequences: 3902068
Number of extensions: 5758933
Number of successful extensions: 139953
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139544
Number of HSP's gapped (non-prelim): 393
length of query: 648
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 625
effective length of database: 17,143,297,704
effective search space: 10714561065000
effective search space used: 10714561065000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top