>RPOC2_SOYBN (Q8HVY3) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP)|
            (Plastid-encoded RNA polymerase beta'' subunit) (RNA
            polymerase beta'' subunit)
          Length = 1386

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 6/33 (18%)
 Frame = -3

Query: 96   HNNVC------ISFGNFGCEQISFVKSKGAPRL 16
            H+N C      +S G F CE +  V++K AP L
Sbjct: 1056 HHNYCEKTFTIMSLGQFICENVCIVQTKNAPHL 1088


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,263,647
Number of Sequences: 219361
Number of extensions: 575979
Number of successful extensions: 1254
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 80,573,946
effective HSP length: 43
effective length of database: 71,141,423
effective search space used: 1707394152
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)