| Clone Name | rbaal34k02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds Length = 590284 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 aaaatttccaaaggatataca 84 ||||||||||||||||||||| Sbjct: 145026 aaaatttccaaaggatataca 145006
>emb|AL512626.8| Human DNA sequence from clone RP11-163I12 on chromosome 1 Contains part of the ESRRG gene for estrogen-related receptor gamma, complete sequence Length = 106859 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 aaaatttccaaaggatataca 84 ||||||||||||||||||||| Sbjct: 81455 aaaatttccaaaggatataca 81475
>gb|AC118646.23| Mus musculus chromosome 15, clone RP24-116A18, complete sequence Length = 205272 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tatacacacattattatgtt 98 |||||||||||||||||||| Sbjct: 74200 tatacacacattattatgtt 74181
>gb|AC183611.2| Pan troglodytes BAC clone CH251-193J21 from chromosome 4, complete sequence Length = 166748 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 tatacacacattattatgtttatt 102 |||||||||| ||||||||||||| Sbjct: 143505 tatacacacagtattatgtttatt 143482
>gb|AC122397.2| Mus musculus BAC clone RP24-90D21 from chromosome 15, complete sequence Length = 181742 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 aaagatccatgtcctaacac 145 |||||||||||||||||||| Sbjct: 71315 aaagatccatgtcctaacac 71334
>emb|AL590966.10| Human DNA sequence from clone RP11-191N8 on chromosome 1 Contains the DUSP10 gene for dual specificity phosphatase 10 (DUSP10), a novel gene and a CpG island, complete sequence Length = 165588 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 tatacacacattattatgtttatt 102 |||||||||| ||||||||||||| Sbjct: 128708 tatacacacagtattatgtttatt 128685
>gb|BC111475.1| Xenopus laevis cDNA clone MGC:131050 IMAGE:7980920, complete cds Length = 2745 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 atatacacacattattatgtttat 101 |||||||||||||||||| ||||| Sbjct: 2155 atatacacacattattatatttat 2132
>gb|AC161198.5| Mus musculus chromosome 15, clone RP23-34E23, complete sequence Length = 237801 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tatacacacattattatgtt 98 |||||||||||||||||||| Sbjct: 212869 tatacacacattattatgtt 212850
>dbj|AP004537.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04C07, TM0098a, complete sequence Length = 33254 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 cccaaaatttccaaaggata 80 |||||||||||||||||||| Sbjct: 30724 cccaaaatttccaaaggata 30705
>emb|AL672228.14| Mouse DNA sequence from clone RP24-133C15 on chromosome 11, complete sequence Length = 162556 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 acaccagaaccctgaaaaag 129 |||||||||||||||||||| Sbjct: 123349 acaccagaaccctgaaaaag 123368 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,277,153 Number of Sequences: 3902068 Number of extensions: 2277153 Number of successful extensions: 148147 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 148129 Number of HSP's gapped (non-prelim): 18 length of query: 203 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 181 effective length of database: 17,147,199,772 effective search space: 3103643158732 effective search space used: 3103643158732 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)