ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal34j01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
2dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
3dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
4dbj|AK119275.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
5dbj|AK068477.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
6gb|AC136839.20| Medicago truncatula clone mth2-13n2, complete se... 60 9e-06
7emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4,... 60 9e-06
8emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4,... 60 9e-06
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 60 9e-06
10dbj|AK102269.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
11dbj|AK068918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
12dbj|AK064338.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
13ref|XM_472773.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
14gb|AC122431.4| Mus musculus BAC clone RP24-176L8 from 6, complet... 52 0.002
15emb|BX006319.1|CNS08D1F Single read from an extremity of a full-... 46 0.14
16ref|XM_317157.2| Anopheles gambiae str. PEST ENSANGP00000023465 ... 46 0.14
17gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 46 0.14
18ref|XM_662454.1| Cryptosporidium hominis TU502 dynein intermedia... 44 0.55
19ref|XM_627994.1| Cryptosporidium parvum Iowa II dynein intermedi... 44 0.55
20emb|AL354931.13| Human DNA sequence from clone RP11-535B18 on ch... 42 2.2
21emb|BX034204.1|CNS08YK0 Single read from an extremity of a full-... 42 2.2
22emb|BX005311.8| Zebrafish DNA sequence from clone DKEY-45J13 in ... 42 2.2
23gb|AC159917.3| Aotus nancymaae clone CH258-526A6, complete sequence 40 8.6
24ref|XM_478691.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.6
25gb|DP000016.1| Pan troglodytes target 1 genomic scaffold 40 8.6
26gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold 40 8.6
27gb|AC087729.2| Pan troglodytes clone RP43-143F17, complete sequence 40 8.6
28gb|AC181988.3| Cavia porcellus clone CH234-334G9, complete sequence 40 8.6
29gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.6
30gb|AC106873.3| Homo sapiens BAC clone RP11-374M7 from 7, complet... 40 8.6
31gb|AY318871.1| Canarypox virus strain ATCC VR-111, complete genome 40 8.6
32emb|CR954257.1| Anopheles gambiae Pen-1 region; BAC clone 32F02 ... 40 8.6
33gb|AC138729.3| Pongo pygmaeus clone CH253-321H12, complete sequence 40 8.6
34ref|XM_809692.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.6
35ref|XM_816232.1| Trypanosoma cruzi strain CL Brener mucin-associ... 40 8.6
36gb|AC127382.4| Homo sapiens BAC clone RP11-1380M11 from UL, comp... 40 8.6
37ref|XM_725773.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 8.6
38ref|XM_735344.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 8.6
39emb|AL512593.9| Human DNA sequence from clone RP11-508N12 on chr... 40 8.6
40emb|AL357559.16| Human DNA sequence from clone RP11-393M18 on ch... 40 8.6
41emb|Z46259.1|SCRPD3COS S.cerevisiae FY1676 RPD3 gene 40 8.6
42gb|AC069063.22| Homo sapiens 3 BAC RP11-58D2 (Roswell Park Cance... 40 8.6
43gb|AC148205.3| Callicebus moloch clone LB5-314H24, complete sequ... 40 8.6
44gb|AC099771.9| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP... 40 8.6
45gb|AC146553.12| Medicago truncatula clone mth2-9e24, complete se... 40 8.6
46gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, comple... 40 8.6
47gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, comple... 40 8.6
48emb|BX510305.5| Zebrafish DNA sequence from clone CH211-107P11 i... 40 8.6
49gb|AC166601.4| Nomascus leucogenys leucogenys clone CH271-401M10... 40 8.6
50gb|AC100822.2| Homo sapiens chromosome 8, clone RP11-654O1, comp... 40 8.6
51gb|AC152398.7| Mus musculus chromosome 18, clone RP23-458M2, com... 40 8.6
52gb|AC146884.3| Callithrix jacchus clone CH259-252N7, complete se... 40 8.6
53gb|AC018501.9| Homo sapiens chromosome 3 clone RP11-283K15 map 3... 40 8.6
54dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
55dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
56gb|AC007821.4|AC007821 Drosophila melanogaster, chromosome 3R, r... 40 8.6
57gb|AC105285.3| Homo sapiens BAC clone RP11-10K16 from 4, complet... 40 8.6
58gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold 40 8.6
59gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold 40 8.6
60dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
61emb|AL935144.11| Zebrafish DNA sequence from clone CH211-89B14 i... 40 8.6
62dbj|AK120618.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
63emb|Z71589.1|SCYNL313C S.cerevisiae chromosome XIV reading frame... 40 8.6
64gb|AE003775.2| Drosophila melanogaster chromosome 3R, section 11... 40 8.6
65gb|DQ331371.1| Synthetic construct Saccharomyces cerevisiae clon... 40 8.6
66gb|AC165378.3| Colobus guereza clone CH272-371N6, complete sequence 40 8.6
67gb|AC090955.3| Homo sapiens chromosome 3 clone RP11-622A14 map 3... 40 8.6
68gb|DP000019.1| Callicebus moloch target 1 genomic scaffold 40 8.6
69emb|AL732564.12| Mouse DNA sequence from clone RP23-442G9 on chr... 40 8.6
70gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.6 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 96/110 (87%), Gaps = 1/110 (0%)
 Strand = Plus / Plus

                                                                            
Query: 471      catccgcctcaaggatcctcttgtggcagaagaggcacagatgaaacccgcaagggcagg 530
                |||| |||||||| || |||||||||||||| || ||||||||||| ||||| ||||| |
Sbjct: 22385106 catctgcctcaagaattctcttgtggcagaacagacacagatgaaaaccgcaggggcaag 22385165

                                                                  
Query: 531      ggaggaagctttgagtctgttgggtcaagatcctcatagcatattgggca 580
                ||||||||| |||| |||||||| ||||| ||||| |||||||| |||||
Sbjct: 22385166 ggaggaagc-ttgaatctgttggatcaaggtcctcgtagcatatagggca 22385214



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 362      tagtgtcttggacccatgctacaagaacggga 393
                |||| |||||||||||| ||||||||||||||
Sbjct: 22384982 tagtatcttggacccatactacaagaacggga 22385013
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>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1267B06
          Length = 156989

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 96/110 (87%), Gaps = 1/110 (0%)
 Strand = Plus / Plus

                                                                          
Query: 471    catccgcctcaaggatcctcttgtggcagaagaggcacagatgaaacccgcaagggcagg 530
              |||| |||||||| || |||||||||||||| || ||||||||||| ||||| ||||| |
Sbjct: 143750 catctgcctcaagaattctcttgtggcagaacagacacagatgaaaaccgcaggggcaag 143809

                                                                
Query: 531    ggaggaagctttgagtctgttgggtcaagatcctcatagcatattgggca 580
              ||||||||| |||| |||||||| ||||| ||||| |||||||| |||||
Sbjct: 143810 ggaggaagc-ttgaatctgttggatcaaggtcctcgtagcatatagggca 143858



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 362    tagtgtcttggacccatgctacaagaacggga 393
              |||| |||||||||||| ||||||||||||||
Sbjct: 143626 tagtatcttggacccatactacaagaacggga 143657
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>dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1115_A05
          Length = 113326

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 96/110 (87%), Gaps = 1/110 (0%)
 Strand = Plus / Plus

                                                                         
Query: 471   catccgcctcaaggatcctcttgtggcagaagaggcacagatgaaacccgcaagggcagg 530
             |||| |||||||| || |||||||||||||| || ||||||||||| ||||| ||||| |
Sbjct: 41325 catctgcctcaagaattctcttgtggcagaacagacacagatgaaaaccgcaggggcaag 41384

                                                               
Query: 531   ggaggaagctttgagtctgttgggtcaagatcctcatagcatattgggca 580
             ||||||||| |||| |||||||| ||||| ||||| |||||||| |||||
Sbjct: 41385 ggaggaagc-ttgaatctgttggatcaaggtcctcgtagcatatagggca 41433



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 362   tagtgtcttggacccatgctacaagaacggga 393
             |||| |||||||||||| ||||||||||||||
Sbjct: 41201 tagtatcttggacccatactacaagaacggga 41232
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>dbj|AK119275.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-B07, full
            insert sequence
          Length = 3265

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 96/110 (87%), Gaps = 1/110 (0%)
 Strand = Plus / Minus

                                                                        
Query: 471  catccgcctcaaggatcctcttgtggcagaagaggcacagatgaaacccgcaagggcagg 530
            |||| |||||||| || |||||||||||||| || ||||||||||| ||||| ||||| |
Sbjct: 1200 catctgcctcaagaattctcttgtggcagaacagacacagatgaaaaccgcaggggcaag 1141

                                                              
Query: 531  ggaggaagctttgagtctgttgggtcaagatcctcatagcatattgggca 580
            ||||||||| |||| |||||||| ||||| ||||| |||||||| |||||
Sbjct: 1140 ggaggaagc-ttgaatctgttggatcaaggtcctcgtagcatatagggca 1092



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 362  tagtgtcttggacccatgctacaagaacggga 393
            |||| |||||||||||| ||||||||||||||
Sbjct: 1324 tagtatcttggacccatactacaagaacggga 1293
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>dbj|AK068477.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153F14, full
            insert sequence
          Length = 1481

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 96/110 (87%), Gaps = 1/110 (0%)
 Strand = Plus / Minus

                                                                        
Query: 471  catccgcctcaaggatcctcttgtggcagaagaggcacagatgaaacccgcaagggcagg 530
            |||| |||||||| || |||||||||||||| || ||||||||||| ||||| ||||| |
Sbjct: 1094 catctgcctcaagaattctcttgtggcagaacagacacagatgaaaaccgcaggggcaag 1035

                                                              
Query: 531  ggaggaagctttgagtctgttgggtcaagatcctcatagcatattgggca 580
            ||||||||| |||| |||||||| ||||| ||||| |||||||| |||||
Sbjct: 1034 ggaggaagc-ttgaatctgttggatcaaggtcctcgtagcatatagggca 986



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 362  tagtgtcttggacccatgctacaagaacggga 393
            |||| |||||||||||| ||||||||||||||
Sbjct: 1218 tagtatcttggacccatactacaagaacggga 1187
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>gb|AC136839.20| Medicago truncatula clone mth2-13n2, complete sequence
          Length = 121995

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 447 gcttcctgcaccctgggcaacgtgcatccgcctcaaggatcctcttgtggcagaagag 504
           ||||||||||||| || ||||| ||||||  |||||| |||||||||||||| |||||
Sbjct: 110 gcttcctgcacccaggacaacgagcatcctgctcaagaatcctcttgtggcaaaagag 53
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>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete
              sequence
          Length = 131246

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                        
Query: 355    cacagcctagtgtcttggacccatgctacaagaacgggatag 396
              |||| |||||| ||||||||||||||||||||| ||||||||
Sbjct: 121173 cacaacctagtatcttggacccatgctacaagaccgggatag 121214



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                          
Query: 448    cttcctgcaccctgggcaacgtgcatccgcctcaaggatcctcttgtggcagaagaggca 507
              |||||||||||| ||||| ||| |||| || || |||||| | |||||||||||||| ||
Sbjct: 121233 cttcctgcacccagggcagcgtccatcagcttcgaggatcttgttgtggcagaagagaca 121292

                 
Query: 508    cag 510
              |||
Sbjct: 121293 cag 121295



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                        
Query: 248    aatattcacatttctttataccaaaa 273
              ||||||||||||||||||||||||||
Sbjct: 121066 aatattcacatttctttataccaaaa 121091



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 541    ttgagtctgttgggtcaagatcctcatagcatattgg 577
              ||||||||||  |||||||||||||  ||||||||||
Sbjct: 121325 ttgagtctgtcaggtcaagatcctcgcagcatattgg 121361
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>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14,
             complete sequence
          Length = 139418

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 355   cacagcctagtgtcttggacccatgctacaagaacgggatag 396
             |||| |||||| ||||||||||||||||||||| ||||||||
Sbjct: 15025 cacaacctagtatcttggacccatgctacaagaccgggatag 15066



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                         
Query: 448   cttcctgcaccctgggcaacgtgcatccgcctcaaggatcctcttgtggcagaagaggca 507
             |||||||||||| ||||| ||| |||| || || |||||| | |||||||||||||| ||
Sbjct: 15085 cttcctgcacccagggcagcgtccatcagcttcgaggatcttgttgtggcagaagagaca 15144

                
Query: 508   cag 510
             |||
Sbjct: 15145 cag 15147



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 248   aatattcacatttctttataccaaaa 273
             ||||||||||||||||||||||||||
Sbjct: 14918 aatattcacatttctttataccaaaa 14943



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 541   ttgagtctgttgggtcaagatcctcatagcatattgg 577
             ||||||||||  |||||||||||||  ||||||||||
Sbjct: 15177 ttgagtctgtcaggtcaagatcctcgcagcatattgg 15213
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                          
Query: 355      cacagcctagtgtcttggacccatgctacaagaacgggatag 396
                |||| |||||| ||||||||||||||||||||| ||||||||
Sbjct: 23124833 cacaacctagtatcttggacccatgctacaagaccgggatag 23124874



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                            
Query: 448      cttcctgcaccctgggcaacgtgcatccgcctcaaggatcctcttgtggcagaagaggca 507
                |||||||||||| ||||| ||| |||| || || |||||| | |||||||||||||| ||
Sbjct: 23124893 cttcctgcacccagggcagcgtccatcagcttcgaggatcttgttgtggcagaagagaca 23124952

                   
Query: 508      cag 510
                |||
Sbjct: 23124953 cag 23124955



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                          
Query: 248      aatattcacatttctttataccaaaa 273
                ||||||||||||||||||||||||||
Sbjct: 23124726 aatattcacatttctttataccaaaa 23124751



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 541      ttgagtctgttgggtcaagatcctcatagcatattgg 577
                ||||||||||  |||||||||||||  ||||||||||
Sbjct: 23124985 ttgagtctgtcaggtcaagatcctcgcagcatattgg 23125021
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>dbj|AK102269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088P15, full
            insert sequence
          Length = 1478

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 355  cacagcctagtgtcttggacccatgctacaagaacgggatag 396
            |||| |||||| ||||||||||||||||||||| ||||||||
Sbjct: 1172 cacaacctagtatcttggacccatgctacaagaccgggatag 1131



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                        
Query: 448  cttcctgcaccctgggcaacgtgcatccgcctcaaggatcctcttgtggcagaagaggca 507
            |||||||||||| ||||| ||| |||| || || |||||| | |||||||||||||| ||
Sbjct: 1112 cttcctgcacccagggcagcgtccatcagcttcgaggatcttgttgtggcagaagagaca 1053

               
Query: 508  cag 510
            |||
Sbjct: 1052 cag 1050



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 248  aatattcacatttctttataccaaaa 273
            ||||||||||||||||||||||||||
Sbjct: 1279 aatattcacatttctttataccaaaa 1254



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 541  ttgagtctgttgggtcaagatcctcatagcatattgg 577
            ||||||||||  |||||||||||||  ||||||||||
Sbjct: 1020 ttgagtctgtcaggtcaagatcctcgcagcatattgg 984
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>dbj|AK068918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169C17, full
            insert sequence
          Length = 2262

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 355  cacagcctagtgtcttggacccatgctacaagaacgggatag 396
            |||| |||||| ||||||||||||||||||||| ||||||||
Sbjct: 1172 cacaacctagtatcttggacccatgctacaagaccgggatag 1131



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                        
Query: 448  cttcctgcaccctgggcaacgtgcatccgcctcaaggatcctcttgtggcagaagaggca 507
            |||||||||||| ||||| ||| |||| || || |||||| | |||||||||||||| ||
Sbjct: 1112 cttcctgcacccagggcagcgtccatcagcttcgaggatcttgttgtggcagaagagaca 1053

               
Query: 508  cag 510
            |||
Sbjct: 1052 cag 1050



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 248  aatattcacatttctttataccaaaa 273
            ||||||||||||||||||||||||||
Sbjct: 1279 aatattcacatttctttataccaaaa 1254



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 541  ttgagtctgttgggtcaagatcctcatagcatattgg 577
            ||||||||||  |||||||||||||  ||||||||||
Sbjct: 1020 ttgagtctgtcaggtcaagatcctcgcagcatattgg 984
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>dbj|AK064338.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-G12, full
            insert sequence
          Length = 1477

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 355  cacagcctagtgtcttggacccatgctacaagaacgggatag 396
            |||| |||||| ||||||||||||||||||||| ||||||||
Sbjct: 1171 cacaacctagtatcttggacccatgctacaagaccgggatag 1130



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                        
Query: 448  cttcctgcaccctgggcaacgtgcatccgcctcaaggatcctcttgtggcagaagaggca 507
            |||||||||||| ||||| ||| |||| || || |||||| | |||||||||||||| ||
Sbjct: 1111 cttcctgcacccagggcagcgtccatcagcttcgaggatcttgttgtggcagaagagaca 1052

               
Query: 508  cag 510
            |||
Sbjct: 1051 cag 1049



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 248  aatattcacatttctttataccaaaa 273
            ||||||||||||||||||||||||||
Sbjct: 1278 aatattcacatttctttataccaaaa 1253



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 541  ttgagtctgttgggtcaagatcctcatagcatattgg 577
            ||||||||||  |||||||||||||  ||||||||||
Sbjct: 1019 ttgagtctgtcaggtcaagatcctcgcagcatattgg 983
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>ref|XM_472773.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1026

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 361  ctagtgtcttggacccatgctacaagaacgggatag 396
            ||||| ||||||||||||||||||||| ||||||||
Sbjct: 1026 ctagtatcttggacccatgctacaagaccgggatag 991



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 448 cttcctgcaccctgggcaacgtgcatccgcctcaaggatcctcttgtggcagaagaggca 507
           |||||||||||| ||||| ||| |||| || || |||||| | |||||||||||||| ||
Sbjct: 972 cttcctgcacccagggcagcgtccatcagcttcgaggatcttgttgtggcagaagagaca 913

              
Query: 508 cag 510
           |||
Sbjct: 912 cag 910



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 541 ttgagtctgttgggtcaagatcctcatagcatattgg 577
           ||||||||||  |||||||||||||  ||||||||||
Sbjct: 880 ttgagtctgtcaggtcaagatcctcgcagcatattgg 844
to top
>gb|AC122431.4| Mus musculus BAC clone RP24-176L8 from 6, complete sequence
          Length = 156005

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 72    agcatatactagtggaaaggaaataa 97
             ||||||||||||||||||||||||||
Sbjct: 57417 agcatatactagtggaaaggaaataa 57392
to top
>emb|BX006319.1|CNS08D1F Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA10CH08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 910

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 403 tggtgctggtgctcctccttctgctgc 429
           |||||||||||| ||||||||||||||
Sbjct: 830 tggtgctggtgcgcctccttctgctgc 856
to top
>ref|XM_317157.2| Anopheles gambiae str. PEST ENSANGP00000023465
           (ENSANGG00000015739), partial mRNA
          Length = 1670

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 403 tggtgctggtgctcctccttctgctgc 429
           |||||||||||| ||||||||||||||
Sbjct: 839 tggtgctggtgcgcctccttctgctgc 813
to top
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 391     ggataggcgcactggtgctggtg 413
               |||||||||||||||||||||||
Sbjct: 1166891 ggataggcgcactggtgctggtg 1166869
to top
>ref|XM_662454.1| Cryptosporidium hominis TU502 dynein intermediate chain 2, cytosolic
            (Chro.10178) partial mRNA
          Length = 2034

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 112  attatatatgatctcacaaact 133
            ||||||||||||||||||||||
Sbjct: 1717 attatatatgatctcacaaact 1738
to top
>ref|XM_627994.1| Cryptosporidium parvum Iowa II dynein intermediate chain (cgd1_1540),
            partial mRNA
          Length = 2034

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 112  attatatatgatctcacaaact 133
            ||||||||||||||||||||||
Sbjct: 1717 attatatatgatctcacaaact 1738
to top
>emb|AL354931.13| Human DNA sequence from clone RP11-535B18 on chromosome 9, complete
             sequence
          Length = 126815

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 421   ttctgctgcagaccctgcatt 441
             |||||||||||||||||||||
Sbjct: 18390 ttctgctgcagaccctgcatt 18370
to top
>emb|BX034204.1|CNS08YK0 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA50AB01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 770

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 150 ctctccaatctccagcaacat 170
           |||||||||||||||||||||
Sbjct: 203 ctctccaatctccagcaacat 223
to top
>emb|BX005311.8| Zebrafish DNA sequence from clone DKEY-45J13 in linkage group 6,
             complete sequence
          Length = 40451

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 167   acatatgcattacacggaatg 187
             |||||||||||||||||||||
Sbjct: 36445 acatatgcattacacggaatg 36465
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>gb|AC159917.3| Aotus nancymaae clone CH258-526A6, complete sequence
          Length = 165172

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    caaatattcacatttcttta 265
              ||||||||||||||||||||
Sbjct: 146219 caaatattcacatttcttta 146238
to top
>ref|XM_478691.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1338

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 tcctcttgtggcagaagagg 505
           ||||||||||||||||||||
Sbjct: 471 tcctcttgtggcagaagagg 490
to top
>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold
          Length = 1623484

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    caaatattcacatttcttta 265
              ||||||||||||||||||||
Sbjct: 895134 caaatattcacatttcttta 895153
to top
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold
          Length = 1952403

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    caaatattcacatttcttta 265
              ||||||||||||||||||||
Sbjct: 940082 caaatattcacatttcttta 940101
to top
>gb|AC087729.2| Pan troglodytes clone RP43-143F17, complete sequence
          Length = 208928

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    caaatattcacatttcttta 265
              ||||||||||||||||||||
Sbjct: 196575 caaatattcacatttcttta 196594
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>gb|AC181988.3| Cavia porcellus clone CH234-334G9, complete sequence
          Length = 98474

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 486   tcctcttgtggcagaagagg 505
             ||||||||||||||||||||
Sbjct: 71329 tcctcttgtggcagaagagg 71348
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 406      tgctggtgctcctccttctgctgc 429
                ||||| ||||||||||||||||||
Sbjct: 13268350 tgctgctgctcctccttctgctgc 13268327
to top
>gb|AC106873.3| Homo sapiens BAC clone RP11-374M7 from 7, complete sequence
          Length = 99596

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   caaatattcacatttcttta 265
             ||||||||||||||||||||
Sbjct: 93803 caaatattcacatttcttta 93822
to top
>gb|AY318871.1| Canarypox virus strain ATCC VR-111, complete genome
          Length = 359853

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    aaaagcagacaatacgcaac 289
              ||||||||||||||||||||
Sbjct: 199697 aaaagcagacaatacgcaac 199716
to top
>emb|CR954257.1| Anopheles gambiae Pen-1 region; BAC clone 32F02 from library NotreDame1
             of Anopheles gambiae (African malaria mosquito) strain
             PEST
          Length = 137277

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   cacaaactgtaacaacaaaa 145
             ||||||||||||||||||||
Sbjct: 27549 cacaaactgtaacaacaaaa 27568
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>gb|AC138729.3| Pongo pygmaeus clone CH253-321H12, complete sequence
          Length = 189877

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   caaatattcacatttcttta 265
             ||||||||||||||||||||
Sbjct: 50091 caaatattcacatttcttta 50110
to top
>ref|XM_809692.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509601.150) partial mRNA
          Length = 1470

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 410 ggtgctcctccttctgctgc 429
           ||||||||||||||||||||
Sbjct: 925 ggtgctcctccttctgctgc 906
to top
>ref|XM_816232.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053510629.350) partial mRNA
          Length = 1128

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 402 ctggtgctggtgctcctccttctg 425
           ||||||||| ||||||||||||||
Sbjct: 353 ctggtgctgttgctcctccttctg 376
to top
>gb|AC127382.4| Homo sapiens BAC clone RP11-1380M11 from UL, complete sequence
          Length = 179507

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   ttggacccatgctacaagaa 388
             ||||||||||||||||||||
Sbjct: 20453 ttggacccatgctacaagaa 20434
to top
>ref|XM_725773.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00294)
           partial mRNA
          Length = 942

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 238 catctattcaaatattcaca 257
           ||||||||||||||||||||
Sbjct: 596 catctattcaaatattcaca 615
to top
>ref|XM_735344.1| Plasmodium chabaudi chabaudi hypothetical protein (PC301300.00.0)
           partial mRNA
          Length = 720

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 238 catctattcaaatattcaca 257
           ||||||||||||||||||||
Sbjct: 449 catctattcaaatattcaca 468
to top
>emb|AL512593.9| Human DNA sequence from clone RP11-508N12 on chromosome 9 Contains two
             novel genes, the gene for a novel zinc finger protein
             (FLJ14960, KIAA1803), a ribosomal protein L7a (RPL7A)
             pseudogene and the 3' end of a novel gene, complete
             sequence
          Length = 148816

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 525   ggcaggggaggaagctttga 544
             ||||||||||||||||||||
Sbjct: 54005 ggcaggggaggaagctttga 54024
to top
>emb|AL357559.16| Human DNA sequence from clone RP11-393M18 on chromosome 1 Contains a
             novel pseudogene, a farnesyl diphosphate synthase
             (farnesyl pyrophosphate synthetase,
             dimethylallyltranstransferase, geranyltranstransferase)
             (FDPS) pseudogene, a novel gene (LOC339476) and the 5' end
             of a solute carrier family 4 (anion exchanger) member 1
             adaptor protein (SLC4A1AP) pseudogene, complete sequence
          Length = 190912

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 255   acatttctttataccaaaagcagacaat 282
             ||||||||||||||||| |||| |||||
Sbjct: 92082 acatttctttataccaacagcaaacaat 92109
to top
>emb|Z46259.1|SCRPD3COS S.cerevisiae FY1676 RPD3 gene
          Length = 40050

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 480   caaggatcctcttgtggcagaaga 503
             ||||||||||||||||| ||||||
Sbjct: 28073 caaggatcctcttgtggaagaaga 28050
to top
>gb|AC069063.22| Homo sapiens 3 BAC RP11-58D2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 112126

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   tagccttcacacagcctagt 365
             ||||||||||||||||||||
Sbjct: 54507 tagccttcacacagcctagt 54526
to top
>gb|AC148205.3| Callicebus moloch clone LB5-314H24, complete sequence
          Length = 153386

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   caaatattcacatttcttta 265
             ||||||||||||||||||||
Sbjct: 15745 caaatattcacatttcttta 15764
to top
>gb|AC099771.9| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-72621, Complete
              Sequence, complete sequence
          Length = 256933

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 248    aatattcacatttctttataccaa 271
              |||| |||||||||||||||||||
Sbjct: 229784 aataatcacatttctttataccaa 229761
to top
>gb|AC146553.12| Medicago truncatula clone mth2-9e24, complete sequence
          Length = 136675

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    tgaacatgactcaactgcta 69
             ||||||||||||||||||||
Sbjct: 71090 tgaacatgactcaactgcta 71071
to top
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence
          Length = 168794

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 413   gctcctccttctgctgcagaccct 436
             |||||||||||||| |||||||||
Sbjct: 40256 gctcctccttctgccgcagaccct 40279
to top
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence
          Length = 118183

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 413    gctcctccttctgctgcagaccct 436
              |||||||||||||| |||||||||
Sbjct: 100239 gctcctccttctgccgcagaccct 100262
to top
>emb|BX510305.5| Zebrafish DNA sequence from clone CH211-107P11 in linkage group 23,
             complete sequence
          Length = 156938

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   acagtaacatgcaaagcaga 325
             ||||||||||||||||||||
Sbjct: 39809 acagtaacatgcaaagcaga 39828
to top
>gb|AC166601.4| Nomascus leucogenys leucogenys clone CH271-401M10, complete sequence
          Length = 184404

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    caaatattcacatttcttta 265
              ||||||||||||||||||||
Sbjct: 181265 caaatattcacatttcttta 181284
to top
>gb|AC100822.2| Homo sapiens chromosome 8, clone RP11-654O1, complete sequence
          Length = 186380

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 400   cactggtgctggtgctcctccttctgct 427
             ||||||||||||||||||| || |||||
Sbjct: 23857 cactggtgctggtgctcctactgctgct 23830
to top
>gb|AC152398.7| Mus musculus chromosome 18, clone RP23-458M2, complete sequence
          Length = 180614

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 427   tgcagaccctgcattgtatagcttcctg 454
             ||||||||||||||| ||||| ||||||
Sbjct: 97518 tgcagaccctgcattttatagtttcctg 97545
to top
>gb|AC146884.3| Callithrix jacchus clone CH259-252N7, complete sequence
          Length = 219392

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   caaatattcacatttcttta 265
             ||||||||||||||||||||
Sbjct: 64744 caaatattcacatttcttta 64763
to top
>gb|AC018501.9| Homo sapiens chromosome 3 clone RP11-283K15 map 3p, complete sequence
          Length = 202070

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   ttggacccatgctacaagaa 388
             ||||||||||||||||||||
Sbjct: 14167 ttggacccatgctacaagaa 14148
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 486      tcctcttgtggcagaagagg 505
                ||||||||||||||||||||
Sbjct: 22258280 tcctcttgtggcagaagagg 22258261
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 406      tgctggtgctcctccttctgctgc 429
                ||||| ||||||||||||||||||
Sbjct: 13265125 tgctgctgctcctccttctgctgc 13265102
to top
>gb|AC007821.4|AC007821 Drosophila melanogaster, chromosome 3R, region 99F-100A, BAC clone
             BACR48I02, complete sequence
          Length = 163741

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   acaaactgtaacaacaaaag 146
             ||||||||||||||||||||
Sbjct: 94123 acaaactgtaacaacaaaag 94142
to top
>gb|AC105285.3| Homo sapiens BAC clone RP11-10K16 from 4, complete sequence
          Length = 156635

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   aaggaaataacagtcacctt 107
            ||||||||||||||||||||
Sbjct: 5276 aaggaaataacagtcacctt 5257
to top
>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold
          Length = 1787293

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    caaatattcacatttcttta 265
              ||||||||||||||||||||
Sbjct: 812903 caaatattcacatttcttta 812922
to top
>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold
          Length = 1819346

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    caaatattcacatttcttta 265
              ||||||||||||||||||||
Sbjct: 780544 caaatattcacatttcttta 780563
to top
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0567H04
          Length = 181420

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 486   tcctcttgtggcagaagagg 505
             ||||||||||||||||||||
Sbjct: 63526 tcctcttgtggcagaagagg 63507
to top
>emb|AL935144.11| Zebrafish DNA sequence from clone CH211-89B14 in linkage group 23,
             complete sequence
          Length = 155322

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   tcctctccaatctccagcaa 167
             ||||||||||||||||||||
Sbjct: 95872 tcctctccaatctccagcaa 95891
to top
>dbj|AK120618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152B16, full
           insert sequence
          Length = 1526

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 486 tcctcttgtggcagaagagg 505
           ||||||||||||||||||||
Sbjct: 434 tcctcttgtggcagaagagg 453
to top
>emb|Z71589.1|SCYNL313C S.cerevisiae chromosome XIV reading frame ORF YNL313c
          Length = 3072

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 480  caaggatcctcttgtggcagaaga 503
            ||||||||||||||||| ||||||
Sbjct: 1558 caaggatcctcttgtggaagaaga 1535
to top
>gb|AE003775.2| Drosophila melanogaster chromosome 3R, section 113 of 118 of the complete
              sequence
          Length = 236096

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    acaaactgtaacaacaaaag 146
              ||||||||||||||||||||
Sbjct: 110778 acaaactgtaacaacaaaag 110797
to top
>gb|DQ331371.1| Synthetic construct Saccharomyces cerevisiae clone FLH202765.01X
            YNL313C gene, complete sequence
          Length = 2715

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 480  caaggatcctcttgtggcagaaga 503
            ||||||||||||||||| ||||||
Sbjct: 1251 caaggatcctcttgtggaagaaga 1274
to top
>gb|AC165378.3| Colobus guereza clone CH272-371N6, complete sequence
          Length = 202455

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   caaatattcacatttcttta 265
             ||||||||||||||||||||
Sbjct: 23821 caaatattcacatttcttta 23840
to top
>gb|AC090955.3| Homo sapiens chromosome 3 clone RP11-622A14 map 3p, complete sequence
          Length = 209168

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    ttggacccatgctacaagaa 388
              ||||||||||||||||||||
Sbjct: 149147 ttggacccatgctacaagaa 149128
to top
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold
          Length = 2105003

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    caaatattcacatttcttta 265
              ||||||||||||||||||||
Sbjct: 930297 caaatattcacatttcttta 930316
to top
>emb|AL732564.12| Mouse DNA sequence from clone RP23-442G9 on chromosome 2, complete
              sequence
          Length = 211657

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 402    ctggtgctggtgctcctccttctgctgc 429
              |||||||||||||| ||||| |||||||
Sbjct: 206760 ctggtgctggtgctgctcctgctgctgc 206733
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>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07,
             from chromosome 3, complete sequence
          Length = 149539

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 406   tgctggtgctcctccttctgctgc 429
             ||||| ||||||||||||||||||
Sbjct: 51491 tgctgctgctcctccttctgctgc 51514


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,084,053
Number of Sequences: 3902068
Number of extensions: 6084053
Number of successful extensions: 129821
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129366
Number of HSP's gapped (non-prelim): 455
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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