ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal34g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
3emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa... 139 1e-29
4emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa... 139 1e-29
5dbj|AP006090.1| Lotus japonicus genomic DNA, chromosome 1, clone... 58 4e-05
6ref|XM_369157.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 46 0.15
7ref|XM_390740.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 44 0.61
8gb|AF311901.1|AF311901 Citrobacter rodentium strain DBS100 patho... 44 0.61
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.61
10dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.61
11dbj|AK069536.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.61
12dbj|AK066485.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.61
13emb|CR974473.23| Mouse DNA sequence from clone RP23-38P5 on chro... 44 0.61
14gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete ge... 44 0.61
15gb|AC150307.3| Rhinolophus ferrumequinum clone VMRC7-71A7, compl... 42 2.4
16gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 42 2.4
17gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 2.4
18emb|AL928952.15| Zebrafish DNA sequence from clone CH211-225G23,... 42 2.4
19gb|AC122766.25| Mus musculus chromosome 3, clone RP24-111F24, co... 40 9.6
20gb|AC125006.9| Mus musculus chromosome 3, clone RP24-157K20, com... 40 9.6
21gb|DQ149611.1| Human adenovirus type 31 hexon protein gene, comp... 40 9.6
22gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.6
23gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.6
24gb|AC137980.4| Mus musculus BAC clone RP24-69K24 from chromosome... 40 9.6
25ref|XM_538961.2| PREDICTED: Canis familiaris similar to progesti... 40 9.6
26emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, compl... 40 9.6
27emb|Y17253.1|HAY17253 Human adenovirus type 31 hexon gene (partial) 40 9.6
28gb|CP000088.1| Thermobifida fusca YX, complete genome 40 9.6
29gb|AF161320.1|AF161320 Pseudomonas aeruginosa NRAMP protein MntH... 40 9.6
30dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
31gb|AE004516.1| Pseudomonas aeruginosa PAO1, section 77 of 529 of... 40 9.6
32gb|AC131681.4| Mus musculus BAC clone RP23-353O7 from 9, complet... 40 9.6
33dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 9.6

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  139 bits (70), Expect = 1e-29
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                            
Query: 176      ccttaggaggatctggtgccaactccatggggtcaacttcaaaaggccaaacatatcgtt 235
                |||| |||||||||||||| | ||||||||| || ||||| |||||||| |||||||| |
Sbjct: 18959592 cctttggaggatctggtgctagctccatgggatcgacttcgaaaggccagacatatcgct 18959651

                                                                            
Query: 236      caggctgcccatttctcgccaagctccaatcatataatcttctctcttcctcggttgata 295
                ||||||  ||| |||| ||||| |||||||| |||||||||||||||||||||||  |||
Sbjct: 18959652 caggctttccacttcttgccaaactccaatcgtataatcttctctcttcctcggtccata 18959711

                                  
Query: 296      atatggtaaaagattcct 313
                 |||||||||||||||||
Sbjct: 18959712 gtatggtaaaagattcct 18959729



 Score =  107 bits (54), Expect = 5e-20
 Identities = 78/86 (90%)
 Strand = Plus / Plus

                                                                            
Query: 466      aggccgcgcatcgccttctgcacgttggcggcggagatgagcgagtagggaggccgcgtg 525
                ||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||| 
Sbjct: 18961188 aggccgcgcatcgccttctgcacgttgtcggcggagatgagcgagtacggcggccgcgtc 18961247

                                          
Query: 526      gaattggcagcgccgccggcgacgtc 551
                ||  | || |||||||||||||||||
Sbjct: 18961248 gacgtcgcggcgccgccggcgacgtc 18961273



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 319      aggtcatgttccttgctgatttcctcttcttccagtcctt 358
                |||||||| |||||| |||||||||||||||||| |||||
Sbjct: 18959828 aggtcatgctccttgttgatttcctcttcttccaatcctt 18959867



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 400      acctcatcggttgacgctaatctggtaattccaagcctcccatagtgatca 450
                ||||||||||| || ||| ||||||| || |||||||||||||| ||||||
Sbjct: 18960758 acctcatcggtagaagctgatctggtgatcccaagcctcccataatgatca 18960808



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                            
Query: 104      aggctacagaaattatgaaccatgtcaacaagaagtagccgacaagctttgtaggaaact 163
                |||| ||||| | ||||||||||| ||  || |||||||| || |||||||| || ||||
Sbjct: 18959324 aggcaacagatagtatgaaccatgccaggaaaaagtagccaaccagctttgttgggaact 18959383

                       
Query: 164      catcttc 170
                |||||||
Sbjct: 18959384 catcttc 18959390



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  139 bits (70), Expect = 1e-29
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                            
Query: 176      ccttaggaggatctggtgccaactccatggggtcaacttcaaaaggccaaacatatcgtt 235
                |||| |||||||||||||| | ||||||||| || ||||| |||||||| |||||||| |
Sbjct: 18885819 cctttggaggatctggtgctagctccatgggatcgacttcgaaaggccagacatatcgct 18885878

                                                                            
Query: 236      caggctgcccatttctcgccaagctccaatcatataatcttctctcttcctcggttgata 295
                ||||||  ||| |||| ||||| |||||||| |||||||||||||||||||||||  |||
Sbjct: 18885879 caggctttccacttcttgccaaactccaatcgtataatcttctctcttcctcggtccata 18885938

                                  
Query: 296      atatggtaaaagattcct 313
                 |||||||||||||||||
Sbjct: 18885939 gtatggtaaaagattcct 18885956



 Score =  107 bits (54), Expect = 5e-20
 Identities = 78/86 (90%)
 Strand = Plus / Plus

                                                                            
Query: 466      aggccgcgcatcgccttctgcacgttggcggcggagatgagcgagtagggaggccgcgtg 525
                ||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||| 
Sbjct: 18887415 aggccgcgcatcgccttctgcacgttgtcggcggagatgagcgagtacggcggccgcgtc 18887474

                                          
Query: 526      gaattggcagcgccgccggcgacgtc 551
                ||  | || |||||||||||||||||
Sbjct: 18887475 gacgtcgcggcgccgccggcgacgtc 18887500



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 319      aggtcatgttccttgctgatttcctcttcttccagtcctt 358
                |||||||| |||||| |||||||||||||||||| |||||
Sbjct: 18886055 aggtcatgctccttgttgatttcctcttcttccaatcctt 18886094



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 400      acctcatcggttgacgctaatctggtaattccaagcctcccatagtgatca 450
                ||||||||||| || ||| ||||||| || |||||||||||||| ||||||
Sbjct: 18886985 acctcatcggtagaagctgatctggtgatcccaagcctcccataatgatca 18887035



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                            
Query: 104      aggctacagaaattatgaaccatgtcaacaagaagtagccgacaagctttgtaggaaact 163
                |||| ||||| | ||||||||||| ||  || |||||||| || |||||||| || ||||
Sbjct: 18885551 aggcaacagatagtatgaaccatgccaggaaaaagtagccaaccagctttgttgggaact 18885610

                       
Query: 164      catcttc 170
                |||||||
Sbjct: 18885611 catcttc 18885617



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>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 153064

 Score =  139 bits (70), Expect = 1e-29
 Identities = 121/138 (87%)
 Strand = Plus / Minus

                                                                         
Query: 176   ccttaggaggatctggtgccaactccatggggtcaacttcaaaaggccaaacatatcgtt 235
             |||| |||||||||||||| | ||||||||| || ||||| |||||||| |||||||| |
Sbjct: 10787 cctttggaggatctggtgctagctccatgggatcgacttcgaaaggccagacatatcgct 10728

                                                                         
Query: 236   caggctgcccatttctcgccaagctccaatcatataatcttctctcttcctcggttgata 295
             ||||||  ||| |||| ||||| |||||||| |||||||||||||||||||||||  |||
Sbjct: 10727 caggctttccacttcttgccaaactccaatcgtataatcttctctcttcctcggtccata 10668

                               
Query: 296   atatggtaaaagattcct 313
              |||||||||||||||||
Sbjct: 10667 gtatggtaaaagattcct 10650



 Score =  107 bits (54), Expect = 5e-20
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                        
Query: 466  aggccgcgcatcgccttctgcacgttggcggcggagatgagcgagtagggaggccgcgtg 525
            ||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||| 
Sbjct: 9191 aggccgcgcatcgccttctgcacgttgtcggcggagatgagcgagtacggcggccgcgtc 9132

                                      
Query: 526  gaattggcagcgccgccggcgacgtc 551
            ||  | || |||||||||||||||||
Sbjct: 9131 gacgtcgcggcgccgccggcgacgtc 9106



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 319   aggtcatgttccttgctgatttcctcttcttccagtcctt 358
             |||||||| |||||| |||||||||||||||||| |||||
Sbjct: 10551 aggtcatgctccttgttgatttcctcttcttccaatcctt 10512



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 400  acctcatcggttgacgctaatctggtaattccaagcctcccatagtgatca 450
            ||||||||||| || ||| ||||||| || |||||||||||||| ||||||
Sbjct: 9621 acctcatcggtagaagctgatctggtgatcccaagcctcccataatgatca 9571



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                         
Query: 104   aggctacagaaattatgaaccatgtcaacaagaagtagccgacaagctttgtaggaaact 163
             |||| ||||| | ||||||||||| ||  || |||||||| || |||||||| || ||||
Sbjct: 11055 aggcaacagatagtatgaaccatgccaggaaaaagtagccaaccagctttgttgggaact 10996

                    
Query: 164   catcttc 170
             |||||||
Sbjct: 10995 catcttc 10989



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>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151203

 Score =  139 bits (70), Expect = 1e-29
 Identities = 121/138 (87%)
 Strand = Plus / Plus

                                                                         
Query: 176   ccttaggaggatctggtgccaactccatggggtcaacttcaaaaggccaaacatatcgtt 235
             |||| |||||||||||||| | ||||||||| || ||||| |||||||| |||||||| |
Sbjct: 55709 cctttggaggatctggtgctagctccatgggatcgacttcgaaaggccagacatatcgct 55768

                                                                         
Query: 236   caggctgcccatttctcgccaagctccaatcatataatcttctctcttcctcggttgata 295
             ||||||  ||| |||| ||||| |||||||| |||||||||||||||||||||||  |||
Sbjct: 55769 caggctttccacttcttgccaaactccaatcgtataatcttctctcttcctcggtccata 55828

                               
Query: 296   atatggtaaaagattcct 313
              |||||||||||||||||
Sbjct: 55829 gtatggtaaaagattcct 55846



 Score =  107 bits (54), Expect = 5e-20
 Identities = 78/86 (90%)
 Strand = Plus / Plus

                                                                         
Query: 466   aggccgcgcatcgccttctgcacgttggcggcggagatgagcgagtagggaggccgcgtg 525
             ||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||| 
Sbjct: 57305 aggccgcgcatcgccttctgcacgttgtcggcggagatgagcgagtacggcggccgcgtc 57364

                                       
Query: 526   gaattggcagcgccgccggcgacgtc 551
             ||  | || |||||||||||||||||
Sbjct: 57365 gacgtcgcggcgccgccggcgacgtc 57390



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 319   aggtcatgttccttgctgatttcctcttcttccagtcctt 358
             |||||||| |||||| |||||||||||||||||| |||||
Sbjct: 55945 aggtcatgctccttgttgatttcctcttcttccaatcctt 55984



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 400   acctcatcggttgacgctaatctggtaattccaagcctcccatagtgatca 450
             ||||||||||| || ||| ||||||| || |||||||||||||| ||||||
Sbjct: 56875 acctcatcggtagaagctgatctggtgatcccaagcctcccataatgatca 56925



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                         
Query: 104   aggctacagaaattatgaaccatgtcaacaagaagtagccgacaagctttgtaggaaact 163
             |||| ||||| | ||||||||||| ||  || |||||||| || |||||||| || ||||
Sbjct: 55441 aggcaacagatagtatgaaccatgccaggaaaaagtagccaaccagctttgttgggaact 55500

                    
Query: 164   catcttc 170
             |||||||
Sbjct: 55501 catcttc 55507



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>dbj|AP006090.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT26D17, TM0154,
            complete sequence
          Length = 85795

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 248  ttctcgccaagctccaatcatataatcttctctcttc 284
            |||| |||||||||||||||||||||||||| |||||
Sbjct: 9525 ttctggccaagctccaatcatataatcttctttcttc 9489



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>ref|XM_369157.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00087.4) partial mRNA
          Length = 1425

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 539 cgccggcgacgtcggttccagcgtcag 565
           ||||||||| |||||||||||||||||
Sbjct: 126 cgccggcgaggtcggttccagcgtcag 152



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>ref|XM_390740.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10564.1)
            partial mRNA
          Length = 8961

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 447  atcagcacctgtaattgcaagg 468
            ||||||||||||||||||||||
Sbjct: 8823 atcagcacctgtaattgcaagg 8802



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>gb|AF311901.1|AF311901 Citrobacter rodentium strain DBS100 pathogenicity island LEE,
            complete sequence
          Length = 42001

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 263  aatcatataatcttctctcttc 284
            ||||||||||||||||||||||
Sbjct: 3982 aatcatataatcttctctcttc 3961



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 527     aattggcagcgccgccggcgacgtcg 552
               ||||||| ||||||||||||||||||
Sbjct: 2039587 aattggcggcgccgccggcgacgtcg 2039612



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>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0041F13
          Length = 163230

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 527   aattggcagcgccgccggcgacgtcg 552
             ||||||| ||||||||||||||||||
Sbjct: 60449 aattggcggcgccgccggcgacgtcg 60474



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>dbj|AK069536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022B22, full
           insert sequence
          Length = 1296

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 527 aattggcagcgccgccggcgacgtcg 552
           ||||||| ||||||||||||||||||
Sbjct: 741 aattggcggcgccgccggcgacgtcg 716



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>dbj|AK066485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068J24, full
           insert sequence
          Length = 1693

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 527 aattggcagcgccgccggcgacgtcg 552
           ||||||| ||||||||||||||||||
Sbjct: 834 aattggcggcgccgccggcgacgtcg 809



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>emb|CR974473.23| Mouse DNA sequence from clone RP23-38P5 on chromosome 17, complete
              sequence
          Length = 219471

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 273    tcttctctcttcctcggttgat 294
              ||||||||||||||||||||||
Sbjct: 192338 tcttctctcttcctcggttgat 192317



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>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 651    tgctgcgaagaatcgggcagcg 672
              ||||||||||||||||||||||
Sbjct: 716396 tgctgcgaagaatcgggcagcg 716417



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>gb|AC150307.3| Rhinolophus ferrumequinum clone VMRC7-71A7, complete sequence
          Length = 137605

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 208   tcaacttcaaaaggccaaaca 228
             |||||||||||||||||||||
Sbjct: 89248 tcaacttcaaaaggccaaaca 89268



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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 208     tcaacttcaaaaggccaaaca 228
               |||||||||||||||||||||
Sbjct: 1708035 tcaacttcaaaaggccaaaca 1708055



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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 536     cgccgccggcgacgtcggttc 556
               |||||||||||||||||||||
Sbjct: 2291716 cgccgccggcgacgtcggttc 2291736



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>emb|AL928952.15| Zebrafish DNA sequence from clone CH211-225G23, complete sequence
          Length = 182212

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 322    tcatgttccttgctgatttcc 342
              |||||||||||||||||||||
Sbjct: 166762 tcatgttccttgctgatttcc 166782



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>gb|AC122766.25| Mus musculus chromosome 3, clone RP24-111F24, complete sequence
          Length = 145902

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   ttcctcttcttccagtcctt 358
             ||||||||||||||||||||
Sbjct: 33068 ttcctcttcttccagtcctt 33087



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>gb|AC125006.9| Mus musculus chromosome 3, clone RP24-157K20, complete sequence
          Length = 169078

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    ttcctcttcttccagtcctt 358
              ||||||||||||||||||||
Sbjct: 150347 ttcctcttcttccagtcctt 150366



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>gb|DQ149611.1| Human adenovirus type 31 hexon protein gene, complete cds
          Length = 2769

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 199  tccatggggtcaacttcaaa 218
            ||||||||||||||||||||
Sbjct: 2642 tccatggggtcaacttcaaa 2623



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>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11,
              complete sequence
          Length = 204649

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 535    gcgccgccggcgacgtcggt 554
              ||||||||||||||||||||
Sbjct: 161289 gcgccgccggcgacgtcggt 161308



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>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0040E06, complete sequence
          Length = 160907

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 535   gcgccgccggcgacgtcggt 554
             ||||||||||||||||||||
Sbjct: 13799 gcgccgccggcgacgtcggt 13818



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>gb|AC137980.4| Mus musculus BAC clone RP24-69K24 from chromosome 9, complete sequence
          Length = 221263

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    gctgatttcctcttcttcca 352
              ||||||||||||||||||||
Sbjct: 204029 gctgatttcctcttcttcca 204048



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>ref|XM_538961.2| PREDICTED: Canis familiaris similar to progestin and adipoQ
           receptor family member VIII (LOC481840), mRNA
          Length = 1065

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 596 ccgaggccgcggccctgccgtcggccgc 623
           ||||||||| ||||||||||| ||||||
Sbjct: 290 ccgaggccgaggccctgccgtgggccgc 317



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>emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, complete sequence
          Length = 191674

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   atttcctcttcttccagtcc 356
             ||||||||||||||||||||
Sbjct: 90533 atttcctcttcttccagtcc 90514



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>emb|Y17253.1|HAY17253 Human adenovirus type 31 hexon gene (partial)
          Length = 790

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 199 tccatggggtcaacttcaaa 218
           ||||||||||||||||||||
Sbjct: 687 tccatggggtcaacttcaaa 668



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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 344     cttcttccagtccttgcttg 363
               ||||||||||||||||||||
Sbjct: 1065388 cttcttccagtccttgcttg 1065407



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>gb|AF161320.1|AF161320 Pseudomonas aeruginosa NRAMP protein MntH2 (mntH2) gene, complete
           cds
          Length = 1560

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 535 gcgccgccggcgacgtcggt 554
           ||||||||||||||||||||
Sbjct: 259 gcgccgccggcgacgtcggt 240



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 535      gcgccgccggcgacgtcggt 554
                ||||||||||||||||||||
Sbjct: 28081124 gcgccgccggcgacgtcggt 28081143



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>gb|AE004516.1| Pseudomonas aeruginosa PAO1, section 77 of 529 of the complete genome
          Length = 10476

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 535  gcgccgccggcgacgtcggt 554
            ||||||||||||||||||||
Sbjct: 2843 gcgccgccggcgacgtcggt 2862



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>gb|AC131681.4| Mus musculus BAC clone RP23-353O7 from 9, complete sequence
          Length = 209929

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 333   gctgatttcctcttcttcca 352
             ||||||||||||||||||||
Sbjct: 11084 gctgatttcctcttcttcca 11103



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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 600    ggccgcggccctgccgtcggccgc 623
              |||||||||||||||| |||||||
Sbjct: 764245 ggccgcggccctgccggcggccgc 764268


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,582,149
Number of Sequences: 3902068
Number of extensions: 5582149
Number of successful extensions: 115520
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114973
Number of HSP's gapped (non-prelim): 547
length of query: 698
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 675
effective length of database: 17,143,297,704
effective search space: 11571725950200
effective search space used: 11571725950200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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