ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal34f14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC120534.5| Oryza sativa (japonica cultivar-group) chromosome... 80 4e-12
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 80 4e-12
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 80 4e-12
4gb|AY104953.1| Zea mays PCO110060 mRNA sequence 76 6e-11
5ref|NM_185423.2| Oryza sativa (japonica cultivar-group), mRNA 72 1e-09
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 72 1e-09
7dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic D... 72 1e-09
8dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic D... 72 1e-09
9dbj|AK066771.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
10dbj|AK059353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
11ref|NM_185429.2| Oryza sativa (japonica cultivar-group), mRNA 68 1e-08
12dbj|AK059160.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 1e-08
13ref|XM_466659.1| Oryza sativa (japonica cultivar-group), mRNA 56 6e-05
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 56 6e-05
15dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic D... 56 6e-05
16dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic D... 56 6e-05
17ref|NM_116312.2| Arabidopsis thaliana ATOZI1 AT4G00860 (ATOZI1) ... 52 9e-04
18emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, c... 52 9e-04
19gb|AY114604.1| Arabidopsis thaliana stress-induced protein OZI1 ... 52 9e-04
20gb|AY093001.1| Arabidopsis thaliana stress-induced protein OZI1 ... 52 9e-04
21emb|BX828910.1|CNS0A4HO Arabidopsis thaliana Full-length cDNA Co... 52 9e-04
22gb|AF013294.1|TM018A10 Arabidopsis thaliana BAC TM018A10 52 9e-04
23gb|U20347.1|ATU20347 Arabidopsis thaliana putative pathogenesis-... 52 9e-04
24gb|BT014293.1| Lycopersicon esculentum clone 133539F, mRNA sequence 44 0.22
25gb|AC016044.11| Homo sapiens chromosome 15 clone RP11-209K10 map... 42 0.85
26dbj|AK158033.1| Mus musculus adult inner ear cDNA, RIKEN full-le... 42 0.85
27emb|AL732483.8| Mouse DNA sequence from clone RP23-70K10 on chro... 42 0.85
28gb|AC129583.15| Mus musculus chromosome 15, clone RP23-197P10, c... 40 3.4
29ref|NM_099999.3| Arabidopsis thaliana unknown protein AT1G01170 ... 40 3.4
30ref|NM_001035849.1| Arabidopsis thaliana unknown protein AT1G011... 40 3.4
31gb|AC099741.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 3.4
32gb|AC117212.5| Mus musculus BAC clone RP23-302A24 from chromosom... 40 3.4
33emb|AL450384.34| Human DNA sequence from clone RP11-383B4 on chr... 40 3.4
34emb|AL365499.19| Human DNA sequence from clone RP11-227E22 on ch... 40 3.4
35gb|BT024529.1| Arabidopsis thaliana At1g01170 mRNA, complete cds 40 3.4
36gb|AY027898.1|AY027893S6 Homo sapiens voltage-dependent calcium ... 40 3.4
37emb|BX818169.1|CNS0ACMJ Arabidopsis thaliana Full-length cDNA Co... 40 3.4
38gb|AC023628.3|AC023628 Arabidopsis thaliana chromosome I BAC F6F... 40 3.4
39dbj|AK118199.1| Arabidopsis thaliana At1g01170 mRNA for unknown ... 40 3.4
40gb|AC007323.5|AC007323 Genomic sequence for Arabidopsis thaliana... 40 3.4
41dbj|AB208917.1| Homo sapiens mRNA for calcium channel, voltage-d... 40 3.4 
>gb|AC120534.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0084A20,
              complete sequence
          Length = 139391

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                          
Query: 217    cttgacgatgaagttctggcggctgatggggttcatgatgaccg 260
              |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 110765 cttgacgatgaagttctggcggctgatgggattcatgatgaccg 110808
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                           
Query: 217     cttgacgatgaagttctggcggctgatggggttcatgatgaccg 260
               |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2969952 cttgacgatgaagttctggcggctgatgggattcatgatgaccg 2969995
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 79.8 bits (40), Expect = 4e-12
 Identities = 43/44 (97%)
 Strand = Plus / Plus

                                                           
Query: 217     cttgacgatgaagttctggcggctgatggggttcatgatgaccg 260
               |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2978983 cttgacgatgaagttctggcggctgatgggattcatgatgaccg 2979026
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>gb|AY104953.1| Zea mays PCO110060 mRNA sequence
          Length = 856

 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 38/38 (100%)
 Strand = Plus / Minus

                                                 
Query: 217 cttgacgatgaagttctggcggctgatggggttcatga 254
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 518 cttgacgatgaagttctggcggctgatggggttcatga 481
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>ref|NM_185423.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 623

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                   
Query: 215 tccttgacgatgaagttctggcggctgatggggttcatga 254
           ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 335 tccttgacgatgaagttctggcgactgatggggttcatga 296
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                      
Query: 215    tccttgacgatgaagttctggcggctgatggggttcatga 254
              ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 831944 tccttgacgatgaagttctggcgactgatggggttcatga 831983



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                    
Query: 221    acgatgaagttctggcggctgatggggttcatgatgac 258
              ||||||||||| ||||||||||||||||||||||||||
Sbjct: 853341 acgatgaagttttggcggctgatggggttcatgatgac 853304
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>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0541H01
          Length = 157519

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                      
Query: 215    tccttgacgatgaagttctggcggctgatggggttcatga 254
              ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 115078 tccttgacgatgaagttctggcgactgatggggttcatga 115117



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                    
Query: 221    acgatgaagttctggcggctgatggggttcatgatgac 258
              ||||||||||| ||||||||||||||||||||||||||
Sbjct: 136475 acgatgaagttttggcggctgatggggttcatgatgac 136438
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>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0019F11
          Length = 123673

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                     
Query: 215   tccttgacgatgaagttctggcggctgatggggttcatga 254
             ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 12839 tccttgacgatgaagttctggcgactgatggggttcatga 12878



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                   
Query: 221   acgatgaagttctggcggctgatggggttcatgatgac 258
             ||||||||||| ||||||||||||||||||||||||||
Sbjct: 34236 acgatgaagttttggcggctgatggggttcatgatgac 34199
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>dbj|AK066771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013083K07, full
           insert sequence
          Length = 640

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                   
Query: 215 tccttgacgatgaagttctggcggctgatggggttcatga 254
           ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 349 tccttgacgatgaagttctggcgactgatggggttcatga 310
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>dbj|AK059353.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-D01, full
           insert sequence
          Length = 623

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                   
Query: 215 tccttgacgatgaagttctggcggctgatggggttcatga 254
           ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 335 tccttgacgatgaagttctggcgactgatggggttcatga 296
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>ref|NM_185429.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 526

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 221 acgatgaagttctggcggctgatggggttcatgatgac 258
           ||||||||||| ||||||||||||||||||||||||||
Sbjct: 296 acgatgaagttttggcggctgatggggttcatgatgac 259
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>dbj|AK059160.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-D05, full
           insert sequence
          Length = 526

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 221 acgatgaagttctggcggctgatggggttcatgatgac 258
           ||||||||||| ||||||||||||||||||||||||||
Sbjct: 296 acgatgaagttttggcggctgatggggttcatgatgac 259
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>ref|XM_466659.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 237

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 217 cttgacgatgaagttctggcggctgatggggttcat 252
           ||||||||||||||||||||| |||| |||||||||
Sbjct: 225 cttgacgatgaagttctggcgcctgacggggttcat 190
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                    
Query: 217      cttgacgatgaagttctggcggctgatggggttcat 252
                ||||||||||||||||||||| |||| |||||||||
Sbjct: 23924144 cttgacgatgaagttctggcgcctgacggggttcat 23924109
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>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0030C08
          Length = 163423

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                  
Query: 217    cttgacgatgaagttctggcggctgatggggttcat 252
              ||||||||||||||||||||| |||| |||||||||
Sbjct: 145810 cttgacgatgaagttctggcgcctgacggggttcat 145775
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>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0496E03
          Length = 138622

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 217   cttgacgatgaagttctggcggctgatggggttcat 252
             ||||||||||||||||||||| |||| |||||||||
Sbjct: 58108 cttgacgatgaagttctggcgcctgacggggttcat 58073
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>ref|NM_116312.2| Arabidopsis thaliana ATOZI1 AT4G00860 (ATOZI1) mRNA, complete cds
          Length = 596

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 217 cttgacgatgaagttctggcggctgatggggttcatga 254
           |||||||||||| |||||||| ||||| ||||||||||
Sbjct: 348 cttgacgatgaaattctggcgactgatagggttcatga 311
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>emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 2
          Length = 197975

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                    
Query: 217    cttgacgatgaagttctggcggctgatggggttcatga 254
              |||||||||||| |||||||| ||||| ||||||||||
Sbjct: 166251 cttgacgatgaaattctggcgactgatagggttcatga 166288
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>gb|AY114604.1| Arabidopsis thaliana stress-induced protein OZI1 precursor
           (At4g00860) mRNA, complete cds
          Length = 399

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 217 cttgacgatgaagttctggcggctgatggggttcatga 254
           |||||||||||| |||||||| ||||| ||||||||||
Sbjct: 228 cttgacgatgaaattctggcgactgatagggttcatga 191
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>gb|AY093001.1| Arabidopsis thaliana stress-induced protein OZI1 precursor
           (At4g00860) mRNA, complete cds
          Length = 574

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 217 cttgacgatgaagttctggcggctgatggggttcatga 254
           |||||||||||| |||||||| ||||| ||||||||||
Sbjct: 348 cttgacgatgaaattctggcgactgatagggttcatga 311
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>emb|BX828910.1|CNS0A4HO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL50ZC01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 442

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 217 cttgacgatgaagttctggcggctgatggggttcatga 254
           |||||||||||| |||||||| ||||| ||||||||||
Sbjct: 278 cttgacgatgaaattctggcgactgatagggttcatga 241
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>gb|AF013294.1|TM018A10 Arabidopsis thaliana BAC TM018A10
          Length = 106184

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 217   cttgacgatgaagttctggcggctgatggggttcatga 254
             |||||||||||| |||||||| ||||| ||||||||||
Sbjct: 68314 cttgacgatgaaattctggcgactgatagggttcatga 68277
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>gb|U20347.1|ATU20347 Arabidopsis thaliana putative pathogenesis-related protein (ATOZI1)
           mRNA, complete cds
          Length = 506

 Score = 52.0 bits (26), Expect = 9e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 217 cttgacgatgaagttctggcggctgatggggttcatga 254
           |||||||||||| |||||||| ||||| ||||||||||
Sbjct: 258 cttgacgatgaaattctggcgactgatagggttcatga 221
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>gb|BT014293.1| Lycopersicon esculentum clone 133539F, mRNA sequence
          Length = 844

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 217 cttgacgatgaagttctggcggctgatggggttcatga 254
           |||||| ||| |||| ||||||||||| ||||||||||
Sbjct: 444 cttgacaatgtagttttggcggctgatagggttcatga 407
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>gb|AC016044.11| Homo sapiens chromosome 15 clone RP11-209K10 map 15q21.3, complete
              sequence
          Length = 168125

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 24     tcttctgttcttcagaagaaa 44
              |||||||||||||||||||||
Sbjct: 157627 tcttctgttcttcagaagaaa 157607
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>dbj|AK158033.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
           library, clone:F930018H02 product:kangai 1 (suppression
           of tumorigenicity 6, prostate), full insert sequence
          Length = 3360

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 23  ctcttctgttcttcagaagaa 43
           |||||||||||||||||||||
Sbjct: 836 ctcttctgttcttcagaagaa 856
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>emb|AL732483.8| Mouse DNA sequence from clone RP23-70K10 on chromosome 2, complete
             sequence
          Length = 201542

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 23    ctcttctgttcttcagaagaa 43
             |||||||||||||||||||||
Sbjct: 27871 ctcttctgttcttcagaagaa 27851
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>gb|AC129583.15| Mus musculus chromosome 15, clone RP23-197P10, complete sequence
          Length = 206094

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    agcaacagaaatcgccatca 158
              ||||||||||||||||||||
Sbjct: 113885 agcaacagaaatcgccatca 113866
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>ref|NM_099999.3| Arabidopsis thaliana unknown protein AT1G01170 transcript variant
           AT1G01170.1 mRNA, complete cds
          Length = 609

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 217 cttgacgatgaagttctggcggctgatggggttcat 252
           |||||||||||| ||||| ||||| ||||| |||||
Sbjct: 313 cttgacgatgaaattctgacggctaatgggattcat 278
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>ref|NM_001035849.1| Arabidopsis thaliana unknown protein AT1G01170 transcript variant
           AT1G01170.2 mRNA, complete cds
          Length = 610

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 217 cttgacgatgaagttctggcggctgatggggttcat 252
           |||||||||||| ||||| ||||| ||||| |||||
Sbjct: 314 cttgacgatgaaattctgacggctaatgggattcat 279
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>gb|AC099741.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-92M3, complete
              sequence
          Length = 249636

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     tcttctgttcttcagaagaa 43
              ||||||||||||||||||||
Sbjct: 224671 tcttctgttcttcagaagaa 224690
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>gb|AC117212.5| Mus musculus BAC clone RP23-302A24 from chromosome 6, complete sequence
          Length = 212735

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     tcttctgttcttcagaagaa 43
              ||||||||||||||||||||
Sbjct: 109376 tcttctgttcttcagaagaa 109357
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>emb|AL450384.34| Human DNA sequence from clone RP11-383B4 on chromosome 10 Contains the
             3' end of the CACNB2 gene for calcium channel
             voltage-dependent beta 2 subunit, the 5' end of a novel
             gene, a novel gene and the 3' end of a novel gene
             (LOC221078) (FLJ23743), complete sequence
          Length = 124571

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    ttctgttcttcagaagaaat 45
             ||||||||||||||||||||
Sbjct: 27870 ttctgttcttcagaagaaat 27889
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>emb|AL365499.19| Human DNA sequence from clone RP11-227E22 on chromosome 6, complete
             sequence
          Length = 84972

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 26    ttctgttcttcagaagaaataaaa 49
             ||||||||||||||| ||||||||
Sbjct: 57648 ttctgttcttcagaacaaataaaa 57671
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>gb|BT024529.1| Arabidopsis thaliana At1g01170 mRNA, complete cds
          Length = 252

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 217 cttgacgatgaagttctggcggctgatggggttcat 252
           |||||||||||| ||||| ||||| ||||| |||||
Sbjct: 237 cttgacgatgaaattctgacggctaatgggattcat 202
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>gb|AY027898.1|AY027893S6 Homo sapiens voltage-dependent calcium channel beta 2 subunit (CACNB2)
             gene, exons 6 through 13 and complete cds
          Length = 29000

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    ttctgttcttcagaagaaat 45
             ||||||||||||||||||||
Sbjct: 27868 ttctgttcttcagaagaaat 27887
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>emb|BX818169.1|CNS0ACMJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL64ZF12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 483

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 217 cttgacgatgaagttctggcggctgatggggttcat 252
           |||||||||||| ||||| ||||| ||||| |||||
Sbjct: 294 cttgacgatgaaattctgacggctaatgggattcat 259
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>gb|AC023628.3|AC023628 Arabidopsis thaliana chromosome I BAC F6F3 genomic sequence, complete
             sequence
          Length = 104001

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 217   cttgacgatgaagttctggcggctgatggggttcat 252
             |||||||||||| ||||| ||||| ||||| |||||
Sbjct: 15028 cttgacgatgaaattctgacggctaatgggattcat 15063
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>dbj|AK118199.1| Arabidopsis thaliana At1g01170 mRNA for unknown protein, complete
           cds, clone: RAFL19-52-C06
          Length = 422

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 217 cttgacgatgaagttctggcggctgatggggttcat 252
           |||||||||||| ||||| ||||| ||||| |||||
Sbjct: 310 cttgacgatgaaattctgacggctaatgggattcat 275
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>gb|AC007323.5|AC007323 Genomic sequence for Arabidopsis thaliana BAC T25K16 from chromosome I,
             complete sequence
          Length = 86436

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 217   cttgacgatgaagttctggcggctgatggggttcat 252
             |||||||||||| ||||| ||||| ||||| |||||
Sbjct: 73822 cttgacgatgaaattctgacggctaatgggattcat 73857
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>dbj|AB208917.1| Homo sapiens mRNA for calcium channel, voltage-dependent, beta 2
            subunit isoform 1 variant protein
          Length = 4468

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 26   ttctgttcttcagaagaaat 45
            ||||||||||||||||||||
Sbjct: 3841 ttctgttcttcagaagaaat 3860


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,630,538
Number of Sequences: 3902068
Number of extensions: 2630538
Number of successful extensions: 58145
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58035
Number of HSP's gapped (non-prelim): 110
length of query: 260
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 238
effective length of database: 17,147,199,772
effective search space: 4081033545736
effective search space used: 4081033545736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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