| Clone Name | rbaal34f06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | V70K_TYMVA (P20131) 69 kDa protein | 27 | 9.3 | 2 | ATA1_SYNY3 (P37367) Cation-transporting ATPase pma1 (EC 3.6.3.-) | 27 | 9.3 |
|---|
>V70K_TYMVA (P20131) 69 kDa protein| Length = 628 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%) Frame = +3 Query: 273 QSPI-LTQGQPRTPHRCPSRIRSEAFLRT 356 Q P+ L Q P TP PS IR +AFL+T Sbjct: 314 QRPVHLHQSGPHTPDFRPSGIRKDAFLQT 342
>ATA1_SYNY3 (P37367) Cation-transporting ATPase pma1 (EC 3.6.3.-)| Length = 905 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -2 Query: 372 FGVGWGFGGMPLNVF 328 F VGWG GG PL +F Sbjct: 264 FAVGWGRGGSPLEMF 278 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,422,972 Number of Sequences: 219361 Number of extensions: 709285 Number of successful extensions: 1816 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1783 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1816 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)