ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7p06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FTSK_XANCP (Q8P993) DNA translocase ftsK 28 7.7
2FTSK_XANAC (Q8PL00) DNA translocase ftsK 28 7.7

>FTSK_XANCP (Q8P993) DNA translocase ftsK|
          Length = 785

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +1

Query: 28  QSTEYRQTRYLVEPMKRIKRDGLVHDARPRPL-VEPLHRPPA 150
           Q+TE++QTR + E  + +++   V  A+  P+ +EP   PPA
Sbjct: 220 QATEWQQTRVMREEREEVRKVDAVKQAKREPVKIEP---PPA 258



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>FTSK_XANAC (Q8PL00) DNA translocase ftsK|
          Length = 785

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +1

Query: 28  QSTEYRQTRYLVEPMKRIKRDGLVHDARPRPL-VEPLHRPPA 150
           Q+TE++QTR + E  + +++   V  A+  P+ +EP   PPA
Sbjct: 220 QATEWQQTRVMREEREEVRKVDAVKQAKREPVKIEP---PPA 258


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,469,319
Number of Sequences: 219361
Number of extensions: 336822
Number of successful extensions: 920
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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