ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal8e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 262 1e-66
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 262 1e-66
3emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb... 262 1e-66
4ref|NM_103058.2| Arabidopsis thaliana ATP binding / nucleoside-t... 68 5e-08
5gb|BT014906.1| Arabidopsis thaliana At1g33290 gene, complete cds 68 5e-08
6gb|BT015032.1| Arabidopsis thaliana At1g33290 mRNA, complete cds 68 5e-08
7gb|AC027035.5|AC027035 Arabidopsis thaliana chromosome 1 BAC T16... 68 5e-08
8emb|BX816642.1|CNS0ABLB Arabidopsis thaliana Full-length cDNA Co... 62 3e-06
9dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 50 0.011
10gb|CP000097.1| Synechococcus sp. CC9902, complete genome 48 0.042
11gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 48 0.042
12emb|AL138921.14| Human DNA sequence from clone RP11-316M21 on ch... 48 0.042
13emb|CR955006.2| Medicago truncatula chromosome 5 clone mth2-5i4,... 46 0.17
14emb|AL391807.13| Human DNA sequence from clone RP3-525N10 on chr... 44 0.66
15gb|AC009961.11| Homo sapiens BAC clone RP11-357L2 from 2, comple... 44 0.66
16gb|AF099810.1|AF099810 Homo sapiens neurexin III-alpha gene, par... 44 0.66
17gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome 42 2.6
18ref|NM_105975.3| Arabidopsis thaliana ATP binding / ATP-dependen... 42 2.6
19ref|XM_630909.1| Dictyostelium discoideum hypothetical protein (... 42 2.6
20gb|U41021.1| Caenorhabditis elegans cosmid F14D12, complete sequ... 42 2.6
21gb|BC079709.1| Xenopus laevis MGC81990 protein, mRNA (cDNA clone... 42 2.6
22gb|AY380826.1| Lymphocystis disease virus - isolate China, compl... 42 2.6
23gb|AC110742.4| Homo sapiens chromosome 11, clone CTD-2026G22, co... 42 2.6
24gb|AY065048.1| Arabidopsis thaliana At1g73170/T18K17_17 mRNA, co... 42 2.6
25gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome 42 2.6
26gb|AC010556.6|AC010556 Arabidopsis thaliana chromosome 1 BAC T18... 42 2.6
27emb|BX813847.1|CNS0ADI8 Arabidopsis thaliana Full-length cDNA Co... 42 2.6
28emb|BX824498.1|CNS0A7EO Arabidopsis thaliana Full-length cDNA Co... 42 2.6
29gb|AC118942.4| Homo sapiens chromosome 11, clone RP11-15P23, com... 42 2.6
30dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 42 2.6
31emb|AL928976.4| Zebrafish DNA sequence from clone CH211-134B16, ... 42 2.6
32gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N... 42 2.6
33dbj|AP001815.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 2.6
34gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome 42 2.6
35gb|AC002375.1|AC002375 Homo sapiens 12q24 PAC RPCI1-74B13 (Roswe... 42 2.6
36gb|AC132481.4| Mus musculus BAC clone RP23-14I14 from 17, comple... 42 2.6 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  262 bits (132), Expect = 1e-66
 Identities = 195/216 (90%)
 Strand = Plus / Plus

                                                                           
Query: 533     accaagtcagataaaactggattctttataatgtttgcaagcctttctccgtgggcagta 592
               ||||| |||||||||  ||||||||||||||||||||| ||   ||||||||| || |||
Sbjct: 5685979 accaaatcagataaagttggattctttataatgtttgcgagatgttctccgtgagctgta 5686038

                                                                           
Query: 593     ccaataagcattacacccctttctgcaattgaccgacaagcttgcgcctctgattcagtt 652
               ||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| 
Sbjct: 5686039 ccaataagcatcacacccctttctgcaattgatcgacaagcttgcgcctctgcttcagta 5686098

                                                                           
Query: 653     ccaatctcgtctacaatgaccacctcaggcatatggttttcaactgcttcaatcatcacc 712
               || ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 5686099 cctatctcatctacaataaccacctcaggcatatggttttcgactgcttcaatcatcact 5686158

                                                   
Query: 713     ctatgctgcattgatggttcaagtacttgcattctt 748
               ||||||||||||||||||| |  |||||||||||||
Sbjct: 5686159 ctatgctgcattgatggttgagctacttgcattctt 5686194



 Score =  172 bits (87), Expect = 1e-39
 Identities = 129/143 (90%)
 Strand = Plus / Plus

                                                                           
Query: 391     ccgatgagtgacccaatagtgtcgctccctcatctcaataagaaaaggaaatgttggagg 450
               ||||||||| ||||| |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 5685362 ccgatgagttacccagtagtgtcgctccctcatctcaataaggaaagggaatgttggagg 5685421

                                                                           
Query: 451     ggccttccgctccagtatacttttttgagtacgtcgtgcacgagcttcctcatcaccaag 510
               |||||||| |||||| |||||||| ||| | || || ||||| || || |||||||||||
Sbjct: 5685422 ggccttcctctccagaatacttttctgactgcggcgagcacgggcctcttcatcaccaag 5685481

                                      
Query: 511     agtgacagtttctactcctccaa 533
               |||||||||||||||||||||||
Sbjct: 5685482 agtgacagtttctactcctccaa 5685504



 Score =  125 bits (63), Expect = 2e-25
 Identities = 72/75 (96%)
 Strand = Plus / Plus

                                                                           
Query: 267     ttcagagtccatctccatcatacgttgcccatctttcaatgataacctgaaactcattat 326
               |||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||
Sbjct: 5684240 ttcagagtccatctccatcatacgttgcccatctttcaatgacaacctgaaacttgttat 5684299

                              
Query: 327     cccttttcctgacct 341
               |||||||||||||||
Sbjct: 5684300 cccttttcctgacct 5684314



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                     
Query: 338     acctcaacgagtggcttcttgccatgaagtagcatatcgacactcctctcagtc 391
               |||||||| ||||| |||||||||||||||| ||| || |||||||| ||||||
Sbjct: 5684641 acctcaacaagtggtttcttgccatgaagtaacatgtccacactcctttcagtc 5684694
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  262 bits (132), Expect = 1e-66
 Identities = 195/216 (90%)
 Strand = Plus / Plus

                                                                           
Query: 533     accaagtcagataaaactggattctttataatgtttgcaagcctttctccgtgggcagta 592
               ||||| |||||||||  ||||||||||||||||||||| ||   ||||||||| || |||
Sbjct: 5685972 accaaatcagataaagttggattctttataatgtttgcgagatgttctccgtgagctgta 5686031

                                                                           
Query: 593     ccaataagcattacacccctttctgcaattgaccgacaagcttgcgcctctgattcagtt 652
               ||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| 
Sbjct: 5686032 ccaataagcatcacacccctttctgcaattgatcgacaagcttgcgcctctgcttcagta 5686091

                                                                           
Query: 653     ccaatctcgtctacaatgaccacctcaggcatatggttttcaactgcttcaatcatcacc 712
               || ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 5686092 cctatctcatctacaataaccacctcaggcatatggttttcgactgcttcaatcatcact 5686151

                                                   
Query: 713     ctatgctgcattgatggttcaagtacttgcattctt 748
               ||||||||||||||||||| |  |||||||||||||
Sbjct: 5686152 ctatgctgcattgatggttgagctacttgcattctt 5686187



 Score =  172 bits (87), Expect = 1e-39
 Identities = 129/143 (90%)
 Strand = Plus / Plus

                                                                           
Query: 391     ccgatgagtgacccaatagtgtcgctccctcatctcaataagaaaaggaaatgttggagg 450
               ||||||||| ||||| |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 5685355 ccgatgagttacccagtagtgtcgctccctcatctcaataaggaaagggaatgttggagg 5685414

                                                                           
Query: 451     ggccttccgctccagtatacttttttgagtacgtcgtgcacgagcttcctcatcaccaag 510
               |||||||| |||||| |||||||| ||| | || || ||||| || || |||||||||||
Sbjct: 5685415 ggccttcctctccagaatacttttctgactgcggcgagcacgggcctcttcatcaccaag 5685474

                                      
Query: 511     agtgacagtttctactcctccaa 533
               |||||||||||||||||||||||
Sbjct: 5685475 agtgacagtttctactcctccaa 5685497



 Score =  125 bits (63), Expect = 2e-25
 Identities = 72/75 (96%)
 Strand = Plus / Plus

                                                                           
Query: 267     ttcagagtccatctccatcatacgttgcccatctttcaatgataacctgaaactcattat 326
               |||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||
Sbjct: 5684233 ttcagagtccatctccatcatacgttgcccatctttcaatgacaacctgaaacttgttat 5684292

                              
Query: 327     cccttttcctgacct 341
               |||||||||||||||
Sbjct: 5684293 cccttttcctgacct 5684307



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                     
Query: 338     acctcaacgagtggcttcttgccatgaagtagcatatcgacactcctctcagtc 391
               |||||||| ||||| |||||||||||||||| ||| || |||||||| ||||||
Sbjct: 5684634 acctcaacaagtggtttcttgccatgaagtaacatgtccacactcctttcagtc 5684687
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>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 159056

 Score =  262 bits (132), Expect = 1e-66
 Identities = 195/216 (90%)
 Strand = Plus / Plus

                                                                         
Query: 533   accaagtcagataaaactggattctttataatgtttgcaagcctttctccgtgggcagta 592
             ||||| |||||||||  ||||||||||||||||||||| ||   ||||||||| || |||
Sbjct: 40502 accaaatcagataaagttggattctttataatgtttgcgagatgttctccgtgagctgta 40561

                                                                         
Query: 593   ccaataagcattacacccctttctgcaattgaccgacaagcttgcgcctctgattcagtt 652
             ||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| 
Sbjct: 40562 ccaataagcatcacacccctttctgcaattgatcgacaagcttgcgcctctgcttcagta 40621

                                                                         
Query: 653   ccaatctcgtctacaatgaccacctcaggcatatggttttcaactgcttcaatcatcacc 712
             || ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 40622 cctatctcatctacaataaccacctcaggcatatggttttcgactgcttcaatcatcact 40681

                                                 
Query: 713   ctatgctgcattgatggttcaagtacttgcattctt 748
             ||||||||||||||||||| |  |||||||||||||
Sbjct: 40682 ctatgctgcattgatggttgagctacttgcattctt 40717



 Score =  172 bits (87), Expect = 1e-39
 Identities = 129/143 (90%)
 Strand = Plus / Plus

                                                                         
Query: 391   ccgatgagtgacccaatagtgtcgctccctcatctcaataagaaaaggaaatgttggagg 450
             ||||||||| ||||| |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 39885 ccgatgagttacccagtagtgtcgctccctcatctcaataaggaaagggaatgttggagg 39944

                                                                         
Query: 451   ggccttccgctccagtatacttttttgagtacgtcgtgcacgagcttcctcatcaccaag 510
             |||||||| |||||| |||||||| ||| | || || ||||| || || |||||||||||
Sbjct: 39945 ggccttcctctccagaatacttttctgactgcggcgagcacgggcctcttcatcaccaag 40004

                                    
Query: 511   agtgacagtttctactcctccaa 533
             |||||||||||||||||||||||
Sbjct: 40005 agtgacagtttctactcctccaa 40027



 Score =  125 bits (63), Expect = 2e-25
 Identities = 72/75 (96%)
 Strand = Plus / Plus

                                                                         
Query: 267   ttcagagtccatctccatcatacgttgcccatctttcaatgataacctgaaactcattat 326
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||
Sbjct: 38763 ttcagagtccatctccatcatacgttgcccatctttcaatgacaacctgaaacttgttat 38822

                            
Query: 327   cccttttcctgacct 341
             |||||||||||||||
Sbjct: 38823 cccttttcctgacct 38837



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                   
Query: 338   acctcaacgagtggcttcttgccatgaagtagcatatcgacactcctctcagtc 391
             |||||||| ||||| |||||||||||||||| ||| || |||||||| ||||||
Sbjct: 39164 acctcaacaagtggtttcttgccatgaagtaacatgtccacactcctttcagtc 39217
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>ref|NM_103058.2| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/
           nucleotide binding AT1G33290 transcript variant
           AT1G33290.1 mRNA, complete cds
          Length = 1270

 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 136/170 (80%)
 Strand = Plus / Minus

                                                                       
Query: 578 tctccgtgggcagtaccaataagcattacacccctttctgcaattgaccgacaagcttgc 637
           ||||| || ||||| ||||| ||||| || || ||||| ||||| || ||||||||  | 
Sbjct: 845 tctccatgagcagtgccaattagcatcactcctctttcagcaatggaacgacaagcaagt 786

                                                                       
Query: 638 gcctctgattcagttccaatctcgtctacaatgaccacctcaggcatatggttttcaact 697
           || || | ||| || |||||||| || || |||| ||| | ||||||||| || ||||||
Sbjct: 785 gcttcagcttctgtgccaatctcatcaacgatgatcacttgaggcatatgattctcaact 726

                                                             
Query: 698 gcttcaatcatcaccctatgctgcattgatggttcaagtacttgcattct 747
           || |||||||||||  |||||||||  ||||| | | |||||||||||||
Sbjct: 725 gcctcaatcatcactttatgctgcaaagatggcttaggtacttgcattct 676
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>gb|BT014906.1| Arabidopsis thaliana At1g33290 gene, complete cds
          Length = 1147

 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 136/170 (80%)
 Strand = Plus / Minus

                                                                       
Query: 578 tctccgtgggcagtaccaataagcattacacccctttctgcaattgaccgacaagcttgc 637
           ||||| || ||||| ||||| ||||| || || ||||| ||||| || ||||||||  | 
Sbjct: 833 tctccatgagcagtgccaattagcatcactcctctttcagcaatggaacgacaagcaagt 774

                                                                       
Query: 638 gcctctgattcagttccaatctcgtctacaatgaccacctcaggcatatggttttcaact 697
           || || | ||| || |||||||| || || |||| ||| | ||||||||| || ||||||
Sbjct: 773 gcttcagcttctgtgccaatctcatcaacgatgatcacttgaggcatatgattctcaact 714

                                                             
Query: 698 gcttcaatcatcaccctatgctgcattgatggttcaagtacttgcattct 747
           || |||||||||||  |||||||||  ||||| | | |||||||||||||
Sbjct: 713 gcctcaatcatcactttatgctgcaaagatggcttaggtacttgcattct 664
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>gb|BT015032.1| Arabidopsis thaliana At1g33290 mRNA, complete cds
          Length = 1140

 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 136/170 (80%)
 Strand = Plus / Minus

                                                                       
Query: 578 tctccgtgggcagtaccaataagcattacacccctttctgcaattgaccgacaagcttgc 637
           ||||| || ||||| ||||| ||||| || || ||||| ||||| || ||||||||  | 
Sbjct: 830 tctccatgagcagtgccaattagcatcactcctctttcagcaatggaacgacaagcaagt 771

                                                                       
Query: 638 gcctctgattcagttccaatctcgtctacaatgaccacctcaggcatatggttttcaact 697
           || || | ||| || |||||||| || || |||| ||| | ||||||||| || ||||||
Sbjct: 770 gcttcagcttctgtgccaatctcatcaacgatgatcacttgaggcatatgattctcaact 711

                                                             
Query: 698 gcttcaatcatcaccctatgctgcattgatggttcaagtacttgcattct 747
           || |||||||||||  |||||||||  ||||| | | |||||||||||||
Sbjct: 710 gcctcaatcatcactttatgctgcaaagatggcttaggtacttgcattct 661
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>gb|AC027035.5|AC027035 Arabidopsis thaliana chromosome 1 BAC T16O9 genomic sequence, complete
             sequence
          Length = 81609

 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 136/170 (80%)
 Strand = Plus / Minus

                                                                         
Query: 578   tctccgtgggcagtaccaataagcattacacccctttctgcaattgaccgacaagcttgc 637
             ||||| || ||||| ||||| ||||| || || ||||| ||||| || ||||||||  | 
Sbjct: 51918 tctccatgagcagtgccaattagcatcactcctctttcagcaatggaacgacaagcaagt 51859

                                                                         
Query: 638   gcctctgattcagttccaatctcgtctacaatgaccacctcaggcatatggttttcaact 697
             || || | ||| || |||||||| || || |||| ||| | ||||||||| || ||||||
Sbjct: 51858 gcttcagcttctgtgccaatctcatcaacgatgatcacttgaggcatatgattctcaact 51799

                                                               
Query: 698   gcttcaatcatcaccctatgctgcattgatggttcaagtacttgcattct 747
             || |||||||||||  |||||||||  ||||| | | |||||||||||||
Sbjct: 51798 gcctcaatcatcactttatgctgcaaagatggcttaggtacttgcattct 51749
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>emb|BX816642.1|CNS0ABLB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH5ZG08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1223

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 653 ccaatctcgtctacaatgaccacctcaggcatatggttttcaactgcttcaatcatcacc 712
           |||||||| || || |||| ||| | ||||||||| || |||||||| ||||||||||| 
Sbjct: 758 ccaatctcatcaacgatgatcacttgaggcatatgattctcaactgcctcaatcatcact 699

                                              
Query: 713 ctatgctgcattgatggttcaagtacttgcattct 747
            |||||||||  ||||| | | |||||||||||||
Sbjct: 698 ttatgctgcaaagatggcttaggtacttgcattct 664
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>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 680    ggcatatggttttcaactgcttcaatcatcacc 712
              |||||||||||||| ||||| ||||||||||||
Sbjct: 442795 ggcatatggttttccactgcctcaatcatcacc 442763
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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                               
Query: 674     acctcaggcatatggttttcaactgcttcaatcatcaccctatgctgc 721
               ||||||||||| |||||||| ||||| || |||||||||  |||||||
Sbjct: 1867042 acctcaggcatgtggttttccactgcctcgatcatcacctgatgctgc 1867089
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                               
Query: 674     acctcaggcatatggttttcaactgcttcaatcatcaccctatgctgc 721
               ||||| |||||||| ||||| || ||||||||||| |||| |||||||
Sbjct: 3362554 acctccggcatatgattttccaccgcttcaatcatgaccccatgctgc 3362601
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>emb|AL138921.14| Human DNA sequence from clone RP11-316M21 on chromosome 10 Contains the
             3' end of gene FLJ30135, the CHUK gene for conserved
             helix-loop ubiquitous kinase, a novel gene (FLJ32012), a
             novel gene containing FLJ10998, FLJ40576, FLJ3922,
             FLJ30751, a prohibitin (PHB) pseudogene, a tropomyosin
             (TPM4) pseudogene and three CpG islands, complete sequence
          Length = 194916

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 319   ctcattatcccttttcctgacctc 342
             ||||||||||||||||||||||||
Sbjct: 61241 ctcattatcccttttcctgacctc 61264
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>emb|CR955006.2| Medicago truncatula chromosome 5 clone mth2-5i4, COMPLETE SEQUENCE
          Length = 108871

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 76    gcatcagttcctttataataacaatat 102
             |||||||||| ||||||||||||||||
Sbjct: 49211 gcatcagttcatttataataacaatat 49185
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>emb|AL391807.13| Human DNA sequence from clone RP3-525N10 on chromosome 6 Contains the
             5' end of the BAI3 gene for brain-specific angiogenesis
             inhibitor 3, a novel gene and a CpG island, complete
             sequence
          Length = 73228

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 32/34 (94%), Gaps = 1/34 (2%)
 Strand = Plus / Minus

                                               
Query: 9     aatgacatcgatataatgaagaatatatagaaaa 42
             |||||||||| ||||||||| |||||||||||||
Sbjct: 48367 aatgacatcg-tataatgaaaaatatatagaaaa 48335
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>gb|AC009961.11| Homo sapiens BAC clone RP11-357L2 from 2, complete sequence
          Length = 216571

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 536    aagtcagataaaactggattct 557
              ||||||||||||||||||||||
Sbjct: 164923 aagtcagataaaactggattct 164902
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>gb|AF099810.1|AF099810 Homo sapiens neurexin III-alpha gene, partial cds
          Length = 193824

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 537   agtcagataaaactggattctt 558
             ||||||||||||||||||||||
Sbjct: 70879 agtcagataaaactggattctt 70858
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>gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome
          Length = 1469720

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 680    ggcatatggttttcaactgcttcaatcat 708
              |||||||||||||||||||| || |||||
Sbjct: 715179 ggcatatggttttcaactgcctctatcat 715151
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>ref|NM_105975.3| Arabidopsis thaliana ATP binding / ATP-dependent peptidase/
           nucleoside-triphosphatase/ nucleotide binding /
           serine-type endopeptidase AT1G73170 mRNA, complete cds
          Length = 2067

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 680 ggcatatggttttcaactgcttcaatcatcacc 712
           |||||||||||||| ||||| ||||||| ||||
Sbjct: 841 ggcatatggttttctactgcctcaatcagcacc 809
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>ref|XM_630909.1| Dictyostelium discoideum hypothetical protein (DDB0188663), partial
            mRNA
          Length = 4692

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 115  ccaaataaactcaacaaactt 135
            |||||||||||||||||||||
Sbjct: 1964 ccaaataaactcaacaaactt 1944
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>gb|U41021.1| Caenorhabditis elegans cosmid F14D12, complete sequence
          Length = 40901

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 211   gcaagtaggaagaaaatgaag 231
             |||||||||||||||||||||
Sbjct: 32651 gcaagtaggaagaaaatgaag 32631
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>gb|BC079709.1| Xenopus laevis MGC81990 protein, mRNA (cDNA clone MGC:81990
           IMAGE:7010465), complete cds
          Length = 2243

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 221 agaaaatgaagcatggcaggagaaa 245
           ||||||||||||||||| |||||||
Sbjct: 937 agaaaatgaagcatggccggagaaa 913
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>gb|AY380826.1| Lymphocystis disease virus - isolate China, complete genome
          Length = 186250

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 113    tgccaaataaactcaacaaacttta 137
              ||||||| |||||||||||||||||
Sbjct: 152837 tgccaaacaaactcaacaaacttta 152861
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>gb|AC110742.4| Homo sapiens chromosome 11, clone CTD-2026G22, complete sequence
          Length = 129095

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 431  agaaaaggaaatgttggaggg 451
            |||||||||||||||||||||
Sbjct: 2541 agaaaaggaaatgttggaggg 2521
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>gb|AY065048.1| Arabidopsis thaliana At1g73170/T18K17_17 mRNA, complete cds
          Length = 2067

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 680 ggcatatggttttcaactgcttcaatcatcacc 712
           |||||||||||||| ||||| ||||||| ||||
Sbjct: 841 ggcatatggttttctactgcctcaatcagcacc 809
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>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 234    tggcaggagaaataacaactt 254
              |||||||||||||||||||||
Sbjct: 778600 tggcaggagaaataacaactt 778580
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>gb|AC010556.6|AC010556 Arabidopsis thaliana chromosome 1 BAC T18K17 genomic sequence, complete
             sequence
          Length = 70836

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 680   ggcatatggttttcaactgcttcaatcatcacc 712
             |||||||||||||| ||||| ||||||| ||||
Sbjct: 54011 ggcatatggttttctactgcctcaatcagcacc 53979
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>emb|BX813847.1|CNS0ADI8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB42ZE01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1989

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 680 ggcatatggttttcaactgcttcaatcatcacc 712
           |||||||||||||| ||||| ||||||| ||||
Sbjct: 826 ggcatatggttttctactgcctcaatcagcacc 794
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>emb|BX824498.1|CNS0A7EO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH52ZD02 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1917

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 677  tcaggcatatggttttcaact 697
            |||||||||||||||||||||
Sbjct: 1914 tcaggcatatggttttcaact 1894
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>gb|AC118942.4| Homo sapiens chromosome 11, clone RP11-15P23, complete sequence
          Length = 161527

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 431    agaaaaggaaatgttggaggg 451
              |||||||||||||||||||||
Sbjct: 130176 agaaaaggaaatgttggaggg 130156
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 680     ggcatatggttttcaactgcttcaatcatcacc 712
               |||||||| ||||| ||||| ||||||||||||
Sbjct: 2782644 ggcatatgattttccactgcctcaatcatcacc 2782612
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>emb|AL928976.4| Zebrafish DNA sequence from clone CH211-134B16, complete sequence
          Length = 173937

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 89     tataataacaatatcactattttat 113
              |||||||||||||| ||||||||||
Sbjct: 136415 tataataacaatataactattttat 136439
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>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete
              sequence
          Length = 116944

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 680    ggcatatggttttcaactgcttcaatcatcacc 712
              |||||||||||||| ||||| ||||||| ||||
Sbjct: 116268 ggcatatggttttctactgcctcaatcagcacc 116300
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>dbj|AP001815.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-97D10, complete
             sequence
          Length = 167653

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 431   agaaaaggaaatgttggaggg 451
             |||||||||||||||||||||
Sbjct: 83793 agaaaaggaaatgttggaggg 83773
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>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 23     aatgaagaatatatagaaaaggtat 47
              ||||||||| |||||||||||||||
Sbjct: 630387 aatgaagaagatatagaaaaggtat 630411
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>gb|AC002375.1|AC002375 Homo sapiens 12q24 PAC RPCI1-74B13 (Roswell Park Cancer Institute Human
             PAC library) complete sequence
          Length = 102579

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 88    ttataataacaatatcactat 108
             |||||||||||||||||||||
Sbjct: 47291 ttataataacaatatcactat 47271
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>gb|AC132481.4| Mus musculus BAC clone RP23-14I14 from 17, complete sequence
          Length = 225031

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 112    atgccaaataaactcaacaaa 132
              |||||||||||||||||||||
Sbjct: 101695 atgccaaataaactcaacaaa 101715


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,899,684
Number of Sequences: 3902068
Number of extensions: 7899684
Number of successful extensions: 151304
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 150985
Number of HSP's gapped (non-prelim): 320
length of query: 748
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 725
effective length of database: 17,143,297,704
effective search space: 12428890835400
effective search space used: 12428890835400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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