ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal33p02 |
|---|---|
| Clone Library Name | barley_pub |
>PP2CA_MOUSE (P49443) Protein phosphatase 2C isoform alpha (EC 3.1.3.16)| (PP2C-alpha) (IA) (Protein phosphatase 1A) Length = 382 Score = 37.0 bits (84), Expect = 0.049 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Frame = -1 Query: 632 RQRLQSGETDLSVICERLLDSCLGRRMSDNMSVILVQFKASARIRS---SPGANPTATAE 462 R RL+ + DL +C ++D+CL + DNMSVIL+ F ++ ++ + A E Sbjct: 255 RSRLEVTD-DLEKVCNEVVDTCLYKGSRDNMSVILICFPSAPKVSAEAVKKEAELDKYLE 313 Query: 461 ARADEI 444 +R +EI Sbjct: 314 SRVEEI 319
>CSP_PLARE (P26694) Circumsporozoite protein precursor (CS)| Length = 388 Score = 35.4 bits (80), Expect = 0.14 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVNG 333 +A ++P ANP A A + ++N NAN ++NPNAN + + NG Sbjct: 212 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNRNNEANG 271 Score = 29.6 bits (65), Expect = 7.8 Identities = 15/54 (27%), Positives = 25/54 (46%) Frame = -1 Query: 497 SSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVN 336 ++P NP A A + ++N NAN ++NPNAN + + + N Sbjct: 189 ANPNVNPNANPNANPN--------ANPNANPNANPNANPNANPNANPNANPNAN 234
>PP2CB_MOUSE (P36993) Protein phosphatase 2C isoform beta (EC 3.1.3.16)| (PP2C-beta) (IA) (Protein phosphatase 1B) Length = 390 Score = 35.4 bits (80), Expect = 0.14 Identities = 23/82 (28%), Positives = 41/82 (50%) Frame = -1 Query: 632 RQRLQSGETDLSVICERLLDSCLGRRMSDNMSVILVQFKASARIRSSPGANPTATAEARA 453 + RL+ + DL +C ++D+CL + DNMSV+LV F + ++ + A R Sbjct: 259 KSRLEVSD-DLENVCNWVVDTCLHKGSRDNMSVVLVCFSNAPKV--------SEEAVKRD 309 Query: 452 DEIKVNIELGGQSSNTNANEEG 387 E+ ++E + + EEG Sbjct: 310 SELDKHLESRVEEIMQKSGEEG 331
>PP2CA_RAT (P20650) Protein phosphatase 2C isoform alpha (EC 3.1.3.16)| (PP2C-alpha) (IA) (Protein phosphatase 1A) Length = 382 Score = 35.4 bits (80), Expect = 0.14 Identities = 17/44 (38%), Positives = 28/44 (63%) Frame = -1 Query: 632 RQRLQSGETDLSVICERLLDSCLGRRMSDNMSVILVQFKASARI 501 R RL+ + DL +C ++D+CL + DNMSVIL+ F + ++ Sbjct: 255 RSRLEVTD-DLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKV 297
>PP2CA_RABIT (P35814) Protein phosphatase 2C isoform alpha (EC 3.1.3.16)| (PP2C-alpha) (IA) (Protein phosphatase 1A) Length = 382 Score = 35.4 bits (80), Expect = 0.14 Identities = 17/44 (38%), Positives = 28/44 (63%) Frame = -1 Query: 632 RQRLQSGETDLSVICERLLDSCLGRRMSDNMSVILVQFKASARI 501 R RL+ + DL +C ++D+CL + DNMSVIL+ F + ++ Sbjct: 255 RSRLEVTD-DLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKV 297
>PP2CA_HUMAN (P35813) Protein phosphatase 2C isoform alpha (EC 3.1.3.16)| (PP2C-alpha) (IA) (Protein phosphatase 1A) Length = 382 Score = 35.4 bits (80), Expect = 0.14 Identities = 17/44 (38%), Positives = 28/44 (63%) Frame = -1 Query: 632 RQRLQSGETDLSVICERLLDSCLGRRMSDNMSVILVQFKASARI 501 R RL+ + DL +C ++D+CL + DNMSVIL+ F + ++ Sbjct: 255 RSRLEVTD-DLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKV 297
>PP2CA_BOVIN (O62829) Protein phosphatase 2C isoform alpha (EC 3.1.3.16)| (PP2C-alpha) Length = 382 Score = 35.4 bits (80), Expect = 0.14 Identities = 17/44 (38%), Positives = 28/44 (63%) Frame = -1 Query: 632 RQRLQSGETDLSVICERLLDSCLGRRMSDNMSVILVQFKASARI 501 R RL+ + DL +C ++D+CL + DNMSVIL+ F + ++ Sbjct: 255 RSRLEVTD-DLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKV 297
>PP2CG_MOUSE (Q61074) Protein phosphatase 2C isoform gamma (EC 3.1.3.16)| (PP2C-gamma) (Protein phosphatase magnesium-dependent 1 gamma) (Protein phosphatase 1C) (Fibroblast growth factor-inducible protein 13) (FIN13) Length = 542 Score = 35.0 bits (79), Expect = 0.19 Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 7/99 (7%) Frame = -1 Query: 629 QRLQSGETDL-SVICERLLDSCLGRRMS------DNMSVILVQFKASARIRSSPGANPTA 471 QR ++GE L S I E LLD CL S DNM+ I++ FK P Sbjct: 459 QRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK------------PRN 506 Query: 470 TAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANED 354 T E +A+ K +E ++ +T E+ G S A D Sbjct: 507 TVELQAESGKRKLE---EALSTEGAEDTGNSDKKKAKRD 542
>CSP_PLAFW (P08307) Circumsporozoite protein precursor (CS)| Length = 442 Score = 34.7 bits (78), Expect = 0.24 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVNG 333 +A ++P ANP A A + ++N NAN ++NPNAN + + NG Sbjct: 266 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNKNNQGNG 325 Score = 34.3 bits (77), Expect = 0.32 Identities = 18/59 (30%), Positives = 28/59 (47%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVN 336 +A ++P ANP A A + ++N NAN ++NPNAN + D + N Sbjct: 158 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNVDPNAN 216 Score = 32.7 bits (73), Expect = 0.92 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVN 336 +A ++P ANP A A + ++N NAN ++NPNAN + + + N Sbjct: 230 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNAN 288 Score = 30.4 bits (67), Expect = 4.6 Identities = 16/59 (27%), Positives = 27/59 (45%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVN 336 +A ++P ANP A + ++N NAN ++NPNAN + + + N Sbjct: 194 NANPNANPNANPNANPNVDPNANPNANPNANPNANPNANPNANPNANPNANPNANPNAN 252
>CSP_PLAFT (P13814) Circumsporozoite protein precursor (CS)| Length = 424 Score = 34.7 bits (78), Expect = 0.24 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVNG 333 +A ++P ANP A A + ++N NAN ++NPNAN + + NG Sbjct: 248 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNKNNQGNG 307 Score = 32.7 bits (73), Expect = 0.92 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVN 336 +A ++P ANP A A + ++N NAN ++NPNAN + + + N Sbjct: 212 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNAN 270 Score = 32.7 bits (73), Expect = 0.92 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVN 336 +A ++P ANP A A + ++N NAN ++NPNAN + + + N Sbjct: 176 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNAN 234 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVN 336 +A ++P ANP A A + ++N NAN ++NPNAN + + + N Sbjct: 148 NANPNANPNANPNANPNANPN--------ANPNANPNANPNANPNANPNANPNANPNAN 198
>CSP_PLAFL (P05691) Circumsporozoite protein (CS) (Fragment)| Length = 315 Score = 34.7 bits (78), Expect = 0.24 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVNG 333 +A ++P ANP A A + ++N NAN ++NPNAN + + NG Sbjct: 216 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNKNNQGNG 275 Score = 33.5 bits (75), Expect = 0.54 Identities = 18/59 (30%), Positives = 28/59 (47%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVN 336 +A ++P ANP A A + ++N NAN ++NPNAN + D + N Sbjct: 132 NANPNANPNANPNANPNANPN--------ANPNANPNANPNANPNANPNANPNVDPNAN 182 Score = 32.7 bits (73), Expect = 0.92 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVN 336 +A ++P ANP A A + ++N NAN ++NPNAN + + + N Sbjct: 180 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNAN 238 Score = 31.2 bits (69), Expect = 2.7 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVN 336 +A ++P ANP A A + ++N NAN ++NPNAN + + + N Sbjct: 136 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNVDPNANPNANPNANPNAN 194
>CSP_PLAFO (P19597) Circumsporozoite protein precursor (CS)| Length = 397 Score = 34.7 bits (78), Expect = 0.24 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVNG 333 +A ++P ANP A A + ++N NAN ++NPNAN + + NG Sbjct: 221 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNKNNQGNG 280 Score = 34.3 bits (77), Expect = 0.32 Identities = 18/59 (30%), Positives = 28/59 (47%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVN 336 +A ++P ANP A A + ++N NAN ++NPNAN + D + N Sbjct: 145 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNVDPNAN 203 Score = 30.8 bits (68), Expect = 3.5 Identities = 16/59 (27%), Positives = 27/59 (45%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVN 336 +A ++P ANP A + ++N NAN ++NPNAN + + + N Sbjct: 185 NANPNANPNANPNVDPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNAN 243
>CSP_PLAFA (P02893) Circumsporozoite protein precursor (CS)| Length = 412 Score = 34.7 bits (78), Expect = 0.24 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVNG 333 +A ++P ANP A A + ++N NAN ++NPNAN + + NG Sbjct: 236 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNKNNQGNG 295 Score = 34.3 bits (77), Expect = 0.32 Identities = 18/59 (30%), Positives = 28/59 (47%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVN 336 +A ++P ANP A A + ++N NAN ++NPNAN + D + N Sbjct: 156 NANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNVDPNAN 214 Score = 32.3 bits (72), Expect = 1.2 Identities = 18/59 (30%), Positives = 31/59 (52%) Frame = -1 Query: 512 SARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVN 336 +A ++P ANP A A + N++ ++N NAN ++NPNAN + + + N Sbjct: 184 NANPNANPNANPNANPNANPNA-NPNVD---PNANPNANPNANPNANPNANPNANPNAN 238 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/54 (29%), Positives = 26/54 (48%) Frame = -1 Query: 497 SSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDDDGSVN 336 ++P ANP A A + ++N NAN ++NPNAN + + + N Sbjct: 213 ANPNANPNANPNANPN--------ANPNANPNANPNANPNANPNANPNANPNAN 258
>PP2CB_BOVIN (O62830) Protein phosphatase 2C isoform beta (EC 3.1.3.16)| (PP2C-beta) Length = 387 Score = 33.9 bits (76), Expect = 0.41 Identities = 15/44 (34%), Positives = 28/44 (63%) Frame = -1 Query: 632 RQRLQSGETDLSVICERLLDSCLGRRMSDNMSVILVQFKASARI 501 + RL+ + DL +C ++D+CL + DNMS++LV F + ++ Sbjct: 259 KSRLEVSD-DLENVCNWVVDTCLHKGSRDNMSIVLVCFSNAPKV 301
>PP2CB_HUMAN (O75688) Protein phosphatase 2C isoform beta (EC 3.1.3.16)| (PP2C-beta) Length = 479 Score = 33.9 bits (76), Expect = 0.41 Identities = 15/44 (34%), Positives = 28/44 (63%) Frame = -1 Query: 632 RQRLQSGETDLSVICERLLDSCLGRRMSDNMSVILVQFKASARI 501 + RL+ + DL +C ++D+CL + DNMS++LV F + ++ Sbjct: 259 KSRLEVSD-DLENVCNWVVDTCLHKGSRDNMSIVLVCFSNAPKV 301
>PP2CB_RAT (P35815) Protein phosphatase 2C isoform beta (EC 3.1.3.16)| (PP2C-beta) (IA) (Protein phosphatase 1B) Length = 390 Score = 33.1 bits (74), Expect = 0.70 Identities = 13/35 (37%), Positives = 23/35 (65%) Frame = -1 Query: 605 DLSVICERLLDSCLGRRMSDNMSVILVQFKASARI 501 DL +C ++D+CL + DNMS++LV F + ++ Sbjct: 267 DLENVCNWVVDTCLHKGSRDNMSIVLVCFANAPKV 301
>PP2CG_HUMAN (O15355) Protein phosphatase 2C isoform gamma (EC 3.1.3.16)| (PP2C-gamma) (Protein phosphatase magnesium-dependent 1 gamma) (Protein phosphatase 1C) Length = 546 Score = 32.3 bits (72), Expect = 1.2 Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 7/100 (7%) Frame = -1 Query: 629 QRLQSGETDL-SVICERLLDSCLGRRMS------DNMSVILVQFKASARIRSSPGANPTA 471 QR ++GE L S I E LLD CL S DNM+ I++ FK P Sbjct: 462 QRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK------------PRN 509 Query: 470 TAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNANEDD 351 TAE + + K +E + +T EE G S + D Sbjct: 510 TAELQPESGKRKLE---EVLSTEGAEENGNSDKKKKAKRD 546
>SCC2_YEAST (Q04002) Sister chromatid cohesion protein 2| Length = 1493 Score = 30.4 bits (67), Expect = 4.6 Identities = 14/42 (33%), Positives = 27/42 (64%) Frame = -3 Query: 135 QSLLLTIRCIVVSLEILLENHLDSPTLFSSSLHFVWILKILD 10 + +LT C+ L++ ++N D+P L S+S+ W+L++LD Sbjct: 216 KKFVLTTNCLT-KLQMTIKNITDNPQL-SNSIEITWLLRLLD 255
>MAF1_YEAST (P41910) Repressor of RNA polymerase III transcription MAF1| Length = 395 Score = 30.4 bits (67), Expect = 4.6 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Frame = -1 Query: 551 SDNMSVILVQFKASARIRSSPGANPTATAEARAD---EIKVNIELGGQSSNTNANEEGGQ 381 ++N + L Q A+ SP ++P + ++ E K I +SN N N G Sbjct: 58 NENYNATLQQQLAAPETNQSPCSSPFYSNRRDSNSFWEQKRRISFSEYNSNNNTNNSNGN 117 Query: 380 SSNPNANEDDDGS 342 SSN N +GS Sbjct: 118 SSNNNNYSGPNGS 130
>MED15_YEAST (P19659) RNA polymerase II mediator complex subunit 15 (Galactose| metabolism protein 11) (Basal expression activator protein 1) (Autonomous replication regulatory protein 3) (Defective silencing suppressor protein 4) (Ty insertion suppressor Length = 1081 Score = 30.4 bits (67), Expect = 4.6 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = -1 Query: 530 LVQFKASARIRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSNPNA 363 L + +A ++++ AN + RA + +NI Q NTN N+ S+ PNA Sbjct: 346 LRKIQALRDVKNNNNANNNGSNLQRAQNVPMNIIQQQQQQNTNNNDTIATSATPNA 401
>Y1252_HAEIN (P45127) ABC transporter ATP-binding protein HI1252| Length = 556 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 2/28 (7%) Frame = +3 Query: 27 SRQNAKKKKTEWV--NPSGSQAKSRAKL 104 +RQ + K+ EWV NP G QAKS+A++ Sbjct: 265 ARQKSIAKELEWVRQNPKGRQAKSKARM 292
>SWI1_YEAST (P09547) Transcription regulatory protein SWI1 (SWI/SNF complex| component SWI1) (Transcription regulatory protein ADR6) (Regulatory protein GAM3) Length = 1314 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -1 Query: 416 SSNTNANEEGGQSSNPNANEDDDGSVNGCVGCFSRMDLFD 297 ++NTN N G SSN N N +++ + G G + FD Sbjct: 39 ANNTNNNNSTGHSSNTNNNTNNNNTNTGASGVDDFQNFFD 78
>ATG13_DEBHA (Q6BQ20) Autophagy-related protein 13| Length = 837 Score = 29.6 bits (65), Expect = 7.8 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Frame = -1 Query: 485 ANPTATAEARADEIKV---NIELGGQSSNTNANEEGGQSSNPNANEDDDGSVNGCVGCFS 315 AN TA + D +K+ N SNTN+ ++ PN EDDD + + S Sbjct: 771 ANNTADNRDQDDSLKLYLTNKLANAPKSNTNSRSLKSSTNPPNIGEDDDDDDDDLLFTMS 830 Query: 314 RMDL 303 M+L Sbjct: 831 DMNL 834
>PCX_DROME (P18490) Protein pecanex| Length = 3433 Score = 29.6 bits (65), Expect = 7.8 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Frame = -1 Query: 485 ANPTATAEARADEIKVNIELG---GQSSNTNANEEGGQSSNPNANEDDDGSVN 336 A+P A AEA ADE + LG G + T E G N N + +G+ N Sbjct: 1756 ADPDAEAEAPADEKQHQGILGTGTGTGTGTTEASENGSGGGANGNTNSNGTGN 1808
>TAGC_DICDI (Q23868) Prestalk-specific protein tagC precursor (EC 3.4.21.-)| Length = 1743 Score = 29.6 bits (65), Expect = 7.8 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Frame = -1 Query: 536 VILVQFKASAR-----IRSSPGANPTATAEARADEIKVNIELGGQSSNTNANEEGGQSSN 372 V VQ +ASA +RS+P T E E N LGG N N N++ N Sbjct: 1310 VSYVQSQASATRVFMILRSAPRKRTTLEEE----EADRNNGLGGGGGNNNNNDDDDDDDN 1365 Query: 371 PNANEDDDG 345 N +D+G Sbjct: 1366 YNGKGNDNG 1374
>YYAP1_HUMAN (Q9H869) YY1-associated protein 1 (Hepatocellular carcinoma| susceptibility protein) (Hepatocellular carcinoma-associated protein 2) Length = 796 Score = 29.6 bits (65), Expect = 7.8 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 268 AQLTHHSSPASNKSMRLKHPTQPLT 342 AQ TH +P S +R+ HP QP T Sbjct: 480 AQSTHSEAPPSKMVLRIPHPIQPAT 504 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,000,129 Number of Sequences: 219361 Number of extensions: 1839885 Number of successful extensions: 5514 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 4996 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5311 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
