ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal33p02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC011415.3| Homo sapiens chromosome 5 clone CTB-87P21, comple... 46 0.14
2gb|AC005477.1|AC005477 Homo sapiens PAC clone RP1-283M22 from 14... 46 0.14
3gb|AC123815.3| Mus musculus BAC clone RP24-238O19 from chromosom... 44 0.55
4gb|AC125153.3| Mus musculus BAC clone RP24-378F2 from chromosome... 44 0.55
5emb|BX005478.7| Zebrafish DNA sequence from clone CH211-77G9, co... 44 0.55
6emb|BX005015.5| Zebrafish DNA sequence from clone CH211-66I11 in... 44 0.55
7gb|AC117825.9| Mus musculus chromosome 18, clone RP24-80J4, comp... 42 2.2
8gb|AC122834.2| Mus musculus BAC clone RP23-183H9 from 15, comple... 42 2.2
9emb|BX649605.1| Aspergillus fumigatus BAC pilot project supercon... 42 2.2
10emb|AL683874.1|AFA14E5 Aspergillus fumigatus BAC AfA14E5 42 2.2
11gb|AC157548.7| Mus musculus chromosome 18, clone RP24-310H1, com... 42 2.2
12gb|AC009242.5| Homo sapiens BAC clone RP11-557N21 from 2, comple... 42 2.2
13gb|AC084465.1|AC084465 Caenorhabditis briggsae cosmid CB039B01, ... 42 2.2
14gb|AC154862.2| Mus musculus BAC clone RP23-8G7 from 13, complete... 42 2.2
15emb|Z73278.1|SCYLR106C S.cerevisiae chromosome XII reading frame... 42 2.2
16gb|U53876.1|YSCL8004 Saccharomyces cerevisiae chromosome XII cos... 42 2.2
17emb|AJ249204.1|ATH249204 Arabidopsis thaliana pyk20 gene, promot... 42 2.2
18gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 8.6
19ref|XM_422139.1| PREDICTED: Gallus gallus similar to Lactase-phl... 40 8.6
20gb|AC107667.12| Mus musculus chromosome 3, clone RP23-187C2, com... 40 8.6
21emb|CR954290.1| Takifugu rubripes DNA, highly conserved vertebra... 40 8.6
22gb|AC125097.3| Mus musculus BAC clone RP24-188J11 from chromosom... 40 8.6
23emb|AL671884.3| Human DNA sequence from clone RP13-44L19 on chro... 40 8.6
24emb|AL592157.4| Human DNA sequence from clone RP11-392M9 on chro... 40 8.6
25emb|AL590678.3| Human DNA sequence from clone RP11-141E7 on chro... 40 8.6
26emb|AL445071.15| Human DNA sequence from clone RP11-460H18 on ch... 40 8.6
27emb|AL138682.13| Human DNA sequence from clone RP11-138D23 on ch... 40 8.6
28gb|AC107980.8| Homo sapiens chromosome 15, clone CTD-3118D7, com... 40 8.6
29emb|Z68489.1|GGGLH2 G.gallus mRNA for GLH2 40 8.6
30emb|Z68488.1|GGGLH1 G.gallus mRNA for GLH1 40 8.6
31emb|CR376751.15| Zebrafish DNA sequence from clone CH211-220M6 i... 40 8.6
32emb|CR847797.8| Zebrafish DNA sequence from clone DKEY-281F2 in ... 40 8.6
33emb|BX247952.2| Mouse DNA sequence from clone RP24-405K16 on chr... 40 8.6
34dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 8.6
35dbj|AK127922.1| Homo sapiens cDNA FLJ46029 fis, clone SPLEN2028046 40 8.6
36gb|AC109462.2| Homo sapiens chromosome 16 clone RP11-26L20, comp... 40 8.6
37gb|AC012409.9| Homo sapiens chromosome 15, clone RP11-327J17, co... 40 8.6
38gb|AC009165.6|AC009165 Homo sapiens chromosome 16 clone RP11-7O2... 40 8.6
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
40gb|AC092722.5| Homo sapiens chromosome 16 clone RP11-517M14, com... 40 8.6
41dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
42dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
43emb|AL136332.5|CNS01DW4 Human chromosome 14 DNA sequence BAC R-8... 40 8.6
44emb|AL159141.5|CNS01RGQ Human chromosome 14 DNA sequence BAC R-8... 40 8.6
45emb|CT573021.3| Pig DNA sequence from clone XX-BE155F1 on chromo... 40 8.6
46gb|AC140791.4| Gallus gallus BAC clone TAM33-20G4 from chromosom... 40 8.6
47gb|AC073434.42| Mus musculus strain C57BL/6J chromosome 9 clone ... 40 8.6
48emb|AL683879.19| Mouse DNA sequence from clone RP23-36D5 on chro... 40 8.6
49emb|AL844487.3| Mouse DNA sequence from clone RP23-162L23 on chr... 40 8.6
50emb|AL772213.7| Mouse DNA sequence from clone RP23-104G16 on chr... 40 8.6 
>gb|AC011415.3| Homo sapiens chromosome 5 clone CTB-87P21, complete sequence
          Length = 116976

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 30    agacaaaatgcaaagaagaagaa 52
             |||||||||||||||||||||||
Sbjct: 93966 agacaaaatgcaaagaagaagaa 93944
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>gb|AC005477.1|AC005477 Homo sapiens PAC clone RP1-283M22 from 14, complete sequence
          Length = 106260

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 30/31 (96%), Gaps = 1/31 (3%)
 Strand = Plus / Plus

                                           
Query: 34   aaaatgcaaaga-agaagaaaacagagtggg 63
            |||||||||||| ||||||||||||||||||
Sbjct: 8482 aaaatgcaaagagagaagaaaacagagtggg 8512
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>gb|AC123815.3| Mus musculus BAC clone RP24-238O19 from chromosome 9, complete sequence
          Length = 136592

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 42     aagaagaagaaaacagagtggg 63
              ||||||||||||||||||||||
Sbjct: 113216 aagaagaagaaaacagagtggg 113237
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>gb|AC125153.3| Mus musculus BAC clone RP24-378F2 from chromosome 6, complete sequence
          Length = 195328

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 244    gatcaaaaattcagaactctaa 265
              ||||||||||||||||||||||
Sbjct: 172777 gatcaaaaattcagaactctaa 172756
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>emb|BX005478.7| Zebrafish DNA sequence from clone CH211-77G9, complete sequence
          Length = 152152

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 29    cagacaaaatgcaaagaagaagaaaa 54
             ||||||||||||||||||||| ||||
Sbjct: 91768 cagacaaaatgcaaagaagaacaaaa 91743
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>emb|BX005015.5| Zebrafish DNA sequence from clone CH211-66I11 in linkage group 9,
             complete sequence
          Length = 172283

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 29    cagacaaaatgcaaagaagaagaaaa 54
             ||||||||||||||||||||| ||||
Sbjct: 70372 cagacaaaatgcaaagaagaacaaaa 70397
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>gb|AC117825.9| Mus musculus chromosome 18, clone RP24-80J4, complete sequence
          Length = 198559

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 36     aatgcaaagaagaagaaaaca 56
              |||||||||||||||||||||
Sbjct: 187525 aatgcaaagaagaagaaaaca 187505
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>gb|AC122834.2| Mus musculus BAC clone RP23-183H9 from 15, complete sequence
          Length = 191019

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 464    cagcagtggcagtggggttgg 484
              |||||||||||||||||||||
Sbjct: 150654 cagcagtggcagtggggttgg 150634
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>emb|BX649605.1| Aspergillus fumigatus BAC pilot project supercontig; segment 1/3
          Length = 345637

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 32     acaaaatgcaaagaagaagaaaaca 56
              |||| ||||||||||||||||||||
Sbjct: 278200 acaagatgcaaagaagaagaaaaca 278224
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>emb|AL683874.1|AFA14E5 Aspergillus fumigatus BAC  AfA14E5
          Length = 68100

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 32    acaaaatgcaaagaagaagaaaaca 56
             |||| ||||||||||||||||||||
Sbjct: 26764 acaagatgcaaagaagaagaaaaca 26788
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>gb|AC157548.7| Mus musculus chromosome 18, clone RP24-310H1, complete sequence
          Length = 177509

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    aatgcaaagaagaagaaaaca 56
             |||||||||||||||||||||
Sbjct: 40164 aatgcaaagaagaagaaaaca 40184
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>gb|AC009242.5| Homo sapiens BAC clone RP11-557N21 from 2, complete sequence
          Length = 158395

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 463   tcagcagtggcagtggggttg 483
             |||||||||||||||||||||
Sbjct: 73510 tcagcagtggcagtggggttg 73490
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>gb|AC084465.1|AC084465 Caenorhabditis briggsae cosmid CB039B01, complete sequence
          Length = 82360

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    aaaatgcaaagaagaagaaaa 54
             |||||||||||||||||||||
Sbjct: 34609 aaaatgcaaagaagaagaaaa 34589
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>gb|AC154862.2| Mus musculus BAC clone RP23-8G7 from 13, complete sequence
          Length = 205028

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 389    cttcctcatttgcatttgtgt 409
              |||||||||||||||||||||
Sbjct: 152701 cttcctcatttgcatttgtgt 152681
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>emb|Z73278.1|SCYLR106C S.cerevisiae chromosome XII reading frame ORF YLR106c
          Length = 15935

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    aaaatgcaaagaagaagaaaa 54
             |||||||||||||||||||||
Sbjct: 13265 aaaatgcaaagaagaagaaaa 13245
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>gb|U53876.1|YSCL8004 Saccharomyces cerevisiae chromosome XII cosmid 8004
          Length = 40340

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    aaaatgcaaagaagaagaaaa 54
             |||||||||||||||||||||
Sbjct: 36348 aaaatgcaaagaagaagaaaa 36328
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>emb|AJ249204.1|ATH249204 Arabidopsis thaliana pyk20 gene, promoter region
          Length = 4037

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 49   agaaaacagagtgggtgaatc 69
            |||||||||||||||||||||
Sbjct: 3741 agaaaacagagtgggtgaatc 3721
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 430     tcgatgttgaccttgatttc 449
               ||||||||||||||||||||
Sbjct: 2655962 tcgatgttgaccttgatttc 2655981
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>ref|XM_422139.1| PREDICTED: Gallus gallus similar to Lactase-phlorizin hydrolase
            precursor (Lactase-glycosylceramidase) (LOC424294), mRNA
          Length = 6267

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 186  acaaagagcaaaaatagcactgta 209
            |||||||||| |||||||||||||
Sbjct: 5970 acaaagagcagaaatagcactgta 5993
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>gb|AC107667.12| Mus musculus chromosome 3, clone RP23-187C2, complete sequence
          Length = 229632

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   cccccttcctcatttgcatt 404
             ||||||||||||||||||||
Sbjct: 94956 cccccttcctcatttgcatt 94937
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>emb|CR954290.1| Takifugu rubripes DNA, highly conserved vertebrate non-coding
           sequence, element ID CNE1393
          Length = 651

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 40  caaagaagaagaaaacagag 59
           ||||||||||||||||||||
Sbjct: 509 caaagaagaagaaaacagag 490
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>gb|AC125097.3| Mus musculus BAC clone RP24-188J11 from chromosome 3, complete
            sequence
          Length = 178057

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 385  cccccttcctcatttgcatt 404
            ||||||||||||||||||||
Sbjct: 1831 cccccttcctcatttgcatt 1850
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>emb|AL671884.3| Human DNA sequence from clone RP13-44L19 on chromosome 6 Contains the
             gene for mandaselin (FLJ12838) and a CpG island, complete
             sequence
          Length = 105273

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 103   tacaatgcaacgtatagtaagtaa 126
             |||||||||||||||| |||||||
Sbjct: 71992 tacaatgcaacgtataataagtaa 71969
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>emb|AL592157.4| Human DNA sequence from clone RP11-392M9 on chromosome X Contains part
             of the DIAPH2 gene for diaphanous (Drosophila, homolog) 2
             and a NADH dehydrogenase pseudogene, complete sequence
          Length = 86487

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     ccatcaaggatctttaatat 27
             ||||||||||||||||||||
Sbjct: 47380 ccatcaaggatctttaatat 47399
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>emb|AL590678.3| Human DNA sequence from clone RP11-141E7 on chromosome 6, complete
              sequence
          Length = 149849

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     cagacaaaatgcaaagaagaagaa 52
              |||||||||||||||||| |||||
Sbjct: 115507 cagacaaaatgcaaagaataagaa 115530
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>emb|AL445071.15| Human DNA sequence from clone RP11-460H18 on chromosome 10 Contains a
              peptidylprolyl isomerase A (cyclophilin A) (PPIA)(CYPA,
              CYPH) pseudogene, a ribosomal protein S24 (RPS24)
              pseudogene, the 5' end of a novel gene and a CpG island,
              complete sequence
          Length = 151478

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     tgaatccaagtggttctcaa 83
              ||||||||||||||||||||
Sbjct: 139453 tgaatccaagtggttctcaa 139472
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>emb|AL138682.13| Human DNA sequence from clone RP11-138D23 on chromosome 13 Contains the
              3' end of a novel gene and 2 novel genes, complete sequence
          Length = 164604

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 595    acactcagatctgtctcccc 614
              ||||||||||||||||||||
Sbjct: 133224 acactcagatctgtctcccc 133205
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>gb|AC107980.8| Homo sapiens chromosome 15, clone CTD-3118D7, complete sequence
          Length = 141868

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   cccccttcctcatttgcatt 404
             ||||||||||||||||||||
Sbjct: 87442 cccccttcctcatttgcatt 87423
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>emb|Z68489.1|GGGLH2 G.gallus mRNA for GLH2
          Length = 1141

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 186 acaaagagcaaaaatagcactgta 209
           |||||||||| |||||||||||||
Sbjct: 264 acaaagagcagaaatagcactgta 287
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>emb|Z68488.1|GGGLH1 G.gallus mRNA for GLH1
          Length = 628

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 186 acaaagagcaaaaatagcactgta 209
           |||||||||| |||||||||||||
Sbjct: 264 acaaagagcagaaatagcactgta 287
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>emb|CR376751.15| Zebrafish DNA sequence from clone CH211-220M6 in linkage group 8,
             complete sequence
          Length = 229078

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   agcaaaaatagcactgtaaa 211
             ||||||||||||||||||||
Sbjct: 85003 agcaaaaatagcactgtaaa 85022
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>emb|CR847797.8| Zebrafish DNA sequence from clone DKEY-281F2 in linkage group 8, complete
              sequence
          Length = 219913

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    agcaaaaatagcactgtaaa 211
              ||||||||||||||||||||
Sbjct: 103383 agcaaaaatagcactgtaaa 103402
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>emb|BX247952.2| Mouse DNA sequence from clone RP24-405K16 on chromosome 4, complete
             sequence
          Length = 117872

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    aaaatgcaaagaagaagaaa 53
             ||||||||||||||||||||
Sbjct: 23458 aaaatgcaaagaagaagaaa 23477
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 14      aggatctttaatatccagac 33
               ||||||||||||||||||||
Sbjct: 4460703 aggatctttaatatccagac 4460722
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>dbj|AK127922.1| Homo sapiens cDNA FLJ46029 fis, clone SPLEN2028046
          Length = 2159

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 393  ctcatttgcatttgtgttgc 412
            ||||||||||||||||||||
Sbjct: 1011 ctcatttgcatttgtgttgc 992
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>gb|AC109462.2| Homo sapiens chromosome 16 clone RP11-26L20, complete sequence
          Length = 174191

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     ctttaatatccagacaaaat 38
              ||||||||||||||||||||
Sbjct: 126915 ctttaatatccagacaaaat 126934
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>gb|AC012409.9| Homo sapiens chromosome 15, clone RP11-327J17, complete sequence
          Length = 183014

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 393    ctcatttgcatttgtgttgc 412
              ||||||||||||||||||||
Sbjct: 151271 ctcatttgcatttgtgttgc 151252
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>gb|AC009165.6|AC009165 Homo sapiens chromosome 16 clone RP11-7O2, complete sequence
          Length = 152225

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ctttaatatccagacaaaat 38
             ||||||||||||||||||||
Sbjct: 77683 ctttaatatccagacaaaat 77702
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 395      catttgcatttgtgttgctg 414
                ||||||||||||||||||||
Sbjct: 34479504 catttgcatttgtgttgctg 34479485
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>gb|AC092722.5| Homo sapiens chromosome 16 clone RP11-517M14, complete sequence
          Length = 189822

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     ctttaatatccagacaaaat 38
              ||||||||||||||||||||
Sbjct: 105943 ctttaatatccagacaaaat 105924
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>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0468B07
          Length = 169071

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 395    catttgcatttgtgttgctg 414
              ||||||||||||||||||||
Sbjct: 161848 catttgcatttgtgttgctg 161829
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>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0425G02
          Length = 155432

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 395   catttgcatttgtgttgctg 414
             ||||||||||||||||||||
Sbjct: 55223 catttgcatttgtgttgctg 55204
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>emb|AL136332.5|CNS01DW4 Human chromosome 14 DNA sequence BAC R-807G16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209157

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 37     atgcaaagaagaagaaaacagagt 60
              ||||||||| ||||||||||||||
Sbjct: 172650 atgcaaagatgaagaaaacagagt 172627
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>emb|AL159141.5|CNS01RGQ Human chromosome 14 DNA sequence BAC R-828K24 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174318

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 37     atgcaaagaagaagaaaacagagt 60
              ||||||||| ||||||||||||||
Sbjct: 103537 atgcaaagatgaagaaaacagagt 103560
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>emb|CT573021.3| Pig DNA sequence from clone XX-BE155F1 on chromosome 14, complete
             sequence
          Length = 118416

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    aaaatgcaaagaagaagaaaacag 57
             |||||||||| |||||||||||||
Sbjct: 38242 aaaatgcaaacaagaagaaaacag 38219
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>gb|AC140791.4| Gallus gallus BAC clone TAM33-20G4 from chromosome ul, complete sequence
          Length = 219854

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 384    ccccccttcctcatttgcat 403
              ||||||||||||||||||||
Sbjct: 178613 ccccccttcctcatttgcat 178594
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>gb|AC073434.42| Mus musculus strain C57BL/6J chromosome 9 clone rp23-159l13, complete
              sequence
          Length = 184073

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 569    atgaatcaagaagtctctca 588
              ||||||||||||||||||||
Sbjct: 160269 atgaatcaagaagtctctca 160288
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>emb|AL683879.19| Mouse DNA sequence from clone RP23-36D5 on chromosome 11, complete
              sequence
          Length = 202441

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 372    gttgctggactgccccccttcctc 395
              ||||||| ||||||||||||||||
Sbjct: 115063 gttgctgtactgccccccttcctc 115040
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>emb|AL844487.3| Mouse DNA sequence from clone RP23-162L23 on chromosome X, complete
              sequence
          Length = 221023

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     aaacagagtgggtgaatcca 71
              ||||||||||||||||||||
Sbjct: 149800 aaacagagtgggtgaatcca 149781
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>emb|AL772213.7| Mouse DNA sequence from clone RP23-104G16 on chromosome 2, complete
             sequence
          Length = 218975

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    atgcaaagaagaagaaaaca 56
             ||||||||||||||||||||
Sbjct: 49939 atgcaaagaagaagaaaaca 49958


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,586,910
Number of Sequences: 3902068
Number of extensions: 6586910
Number of successful extensions: 235832
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 235570
Number of HSP's gapped (non-prelim): 263
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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