ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal34d18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (... 142 4e-34
2OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42... 135 4e-32
3OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42... 134 1e-31
4OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42... 132 6e-31
5OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42... 107 2e-23
6OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42... 106 3e-23
7OPRL1_ARATH (Q8GYA3) Putative 12-oxophytodienoate reductase-like... 97 3e-20
8OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.... 76 5e-14
9OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.... 73 3e-13
10NEMA_ECOLI (P77258) N-ethylmaleimide reductase (EC 1.-.-.-) (N-e... 59 8e-09
11OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yel... 58 1e-08
12OYE2_YEAST (Q03558) NADPH dehydrogenase 2 (EC 1.6.99.1) (Old yel... 54 2e-07
13OYE1_SACPS (Q02899) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yel... 54 2e-07
14KYE1_KLULA (P40952) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yel... 54 3e-07
15EBP1_CANAL (P43084) Probable NADPH dehydrogenase (EC 1.6.99.1) (... 38 0.015
16YTHD1_HUMAN (Q9BYJ9) YTH domain protein 1 (Dermatomyositis assoc... 33 0.36
17RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats pro... 31 1.8
18YWLC_BACSU (P39153) Hypothetical protein ywlC 30 3.1
19SELV_HUMAN (P59797) Selenoprotein V 30 3.1
20YTHD1_MOUSE (P59326) YTH domain protein 1 (Dermatomyositis assoc... 30 4.0
21MUC2L_RAT (P98089) Intestinal mucin-like protein (MLP) (Fragment) 30 4.0
22SAS_DROME (Q04164) Putative epidermal cell surface receptor prec... 29 5.2
23WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC... 29 6.8
24SYNG_MOUSE (Q5SV85) AP1 gamma subunit-binding protein 1 (Gamma-s... 29 6.8
25PLS1_MOUSE (Q9JJ00) Phospholipid scramblase 1 (PL scramblase 1) ... 29 6.8
26SECA2_MYCLE (O32922) Preprotein translocase secA 2 subunit 29 6.8
27EFG_FUSNN (Q8R602) Elongation factor G (EF-G) 28 8.9
28Y924_THET8 (Q56419) UPF0103 protein TTHA0924 28 8.9
29PLS1_RAT (P58195) Phospholipid scramblase 1 (PL scramblase 1) (C... 28 8.9

>OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (EC 1.3.1.-)|
           (LeOPR2)
          Length = 355

 Score =  142 bits (358), Expect = 4e-34
 Identities = 64/111 (57%), Positives = 87/111 (78%)
 Frame = -3

Query: 429 HVIGAMNGLGVLXXHMIEPRMCVNXRMIPRRLLPFRKAFRGTFMVNGGYDREEGDRAVDE 250
           ++   ++ LGVL  H++EPR  VN     R LLP RKAF+GT + +GGY + +G++A+DE
Sbjct: 246 YMANELSKLGVLYLHVMEPRETVN-----RSLLPIRKAFKGTLIASGGYGKSDGEKAIDE 300

Query: 249 GYAHLVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYPFL 97
            YA L+++GR+FLANPDLP+RF  NA LNKY+RSTFYT+DP++GYTDYPFL
Sbjct: 301 NYADLISFGRMFLANPDLPKRFEVNAPLNKYNRSTFYTNDPIIGYTDYPFL 351



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>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase
           1) (LeOPR1)
          Length = 376

 Score =  135 bits (341), Expect = 4e-32
 Identities = 64/113 (56%), Positives = 85/113 (75%), Gaps = 2/113 (1%)
 Frame = -3

Query: 429 HVIGAMNGLGVLXXHMIEPRMCVNXRMIP--RRLLPFRKAFRGTFMVNGGYDREEGDRAV 256
           +++ ++N   +   H++EPRM      I     L+P RKA++GTF+V GGYDRE+G+RA+
Sbjct: 260 YMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRAL 319

Query: 255 DEGYAHLVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYPFL 97
            E  A LVAYGR+F++NPDLP+RF  NA LNKY+R TFYTSDP+VGYTDYPFL
Sbjct: 320 IEDRADLVAYGRLFISNPDLPKRFELNAPLNKYNRDTFYTSDPIVGYTDYPFL 372



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>OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase
           1) (AtOPR1) (FS-AT-I)
          Length = 372

 Score =  134 bits (337), Expect = 1e-31
 Identities = 66/109 (60%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
 Frame = -3

Query: 417 AMNGLGVLXXHMIEPRMCVNXRM--IPRRLLPFRKAFRGTFMVNGGYDREEGDRAVDEGY 244
           ++N  G+L  H+IE RM     +   P  L+P RKAF+GTF+  GG+ RE+G+ AV +G 
Sbjct: 260 SLNKYGILYCHVIEARMKTMGEVHACPHTLMPMRKAFKGTFISAGGFTREDGNEAVSKGR 319

Query: 243 AHLVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYPFL 97
             LVAYGR FLANPDLP+RF+ +A LNKYDR TFYTSDPVVGYTDYPFL
Sbjct: 320 TDLVAYGRWFLANPDLPKRFQVDAPLNKYDRPTFYTSDPVVGYTDYPFL 368



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>OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 2) (OPDA-reductase
           2) (AtOPR2)
          Length = 374

 Score =  132 bits (331), Expect = 6e-31
 Identities = 65/113 (57%), Positives = 84/113 (74%), Gaps = 2/113 (1%)
 Frame = -3

Query: 429 HVIGAMNGLGVLXXHMIEPRMCVNXRMIP--RRLLPFRKAFRGTFMVNGGYDREEGDRAV 256
           +++ ++N  G+L  HMIEPRM     +      L+P R+AF+GTF+  GG+ RE+G+ AV
Sbjct: 258 YMVESLNKYGILYCHMIEPRMKTVGEIAACSHTLMPMREAFKGTFISAGGFTREDGNEAV 317

Query: 255 DEGYAHLVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYPFL 97
            +G   LVAYGR FLANPDLP+RF+ +A LNKY+RSTFYTSDPVVGYTDYP L
Sbjct: 318 AKGRTDLVAYGRWFLANPDLPKRFQLDAPLNKYNRSTFYTSDPVVGYTDYPSL 370



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>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase
           3) (LeOPR3)
          Length = 396

 Score =  107 bits (266), Expect = 2e-23
 Identities = 50/82 (60%), Positives = 62/82 (75%)
 Frame = -3

Query: 342 RRLLPFRKAFRGTFMVNGGYDREEGDRAVDEGYAHLVAYGRIFLANPDLPERFRRNAALN 163
           R +   R A++GTF+ +GGY RE G  AV +G A LV+YGR+F++NPDL  R + NA LN
Sbjct: 303 RLMRTLRNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLN 362

Query: 162 KYDRSTFYTSDPVVGYTDYPFL 97
           KY+R TFYT DPVVGYTDYPFL
Sbjct: 363 KYNRKTFYTQDPVVGYTDYPFL 384



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>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase
           3) (Delayed dehiscence 1) (AtOPR3)
          Length = 391

 Score =  106 bits (264), Expect = 3e-23
 Identities = 48/76 (63%), Positives = 61/76 (80%)
 Frame = -3

Query: 324 RKAFRGTFMVNGGYDREEGDRAVDEGYAHLVAYGRIFLANPDLPERFRRNAALNKYDRST 145
           R A+ GTFM +GG+++E G +AV +G A LV+YGR+F+ANPDL  RF+ +  LNKY+R T
Sbjct: 310 RMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKT 369

Query: 144 FYTSDPVVGYTDYPFL 97
           FYT DPVVGYTDYPFL
Sbjct: 370 FYTQDPVVGYTDYPFL 385



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>OPRL1_ARATH (Q8GYA3) Putative 12-oxophytodienoate reductase-like protein 1 (EC|
           1.3.1.-)
          Length = 324

 Score = 96.7 bits (239), Expect = 3e-20
 Identities = 50/88 (56%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
 Frame = -3

Query: 417 AMNGLGVLXXHMIEPRMCVNXRMIPRR--LLPFRKAFRGTFMVNGGYDREEGDRAVDEGY 244
           ++N   +L  HMIEPRM     +   R  L P R AF GTF+V GGY RE+G++AV EG 
Sbjct: 237 SLNRFEILYCHMIEPRMKTVSEIFECRESLTPMRNAFNGTFIVAGGYTREDGNKAVAEGR 296

Query: 243 AHLVAYGRIFLANPDLPERFRRNAALNK 160
             LVAYGR+FLANPDLP+RF  NA LNK
Sbjct: 297 TDLVAYGRLFLANPDLPKRFELNAPLNK 324



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>OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.6.99.1) (Old|
           yellow enzyme homolog)
          Length = 392

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
 Frame = -3

Query: 387 HMIEPRMCVNXRMI---PRRLLPFRKAFRGTFMVNGGYDREEGDRAVDEGYAHLVAYGRI 217
           H IEPR   N  +     +  L ++  +   F+  GG+DR+   +  ++    LVA+GR 
Sbjct: 284 HAIEPRQYWNGHVHITQEKNTLIYKNLWGDPFITAGGHDRDSAIQMAEQENT-LVAFGRY 342

Query: 216 FLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYPF 100
           FL+NPDLP R + N  LNK+DR+TFYT     GY DYPF
Sbjct: 343 FLSNPDLPFRLKYNLPLNKWDRATFYTKMSPKGYIDYPF 381



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>OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.6.99.1) (Old|
           yellow enzyme homolog)
          Length = 382

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
 Frame = -3

Query: 387 HMIEPRMCVNXRMI---PRRLLPFRKAFRGTFMVNGGYDREEGDRAVDEGYAHLVAYGRI 217
           H IEPR   +   +    +     +K ++G F+  GGYD E   +A +E    LVA+GR 
Sbjct: 277 HAIEPRKYWSGHKLVSSEQNTSFLQKYWKGPFITAGGYDPETAVQAANERGV-LVAFGRN 335

Query: 216 FLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYPF 100
           F+ANPDL  R + +  LNK+DRS+FY      GYTDYPF
Sbjct: 336 FIANPDLVFRIKHHIPLNKWDRSSFYLPKTEKGYTDYPF 374



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>NEMA_ECOLI (P77258) N-ethylmaleimide reductase (EC 1.-.-.-) (N-ethylmaleimide|
           reducing enzyme)
          Length = 365

 Score = 58.5 bits (140), Expect = 8e-09
 Identities = 36/111 (32%), Positives = 50/111 (45%)
 Frame = -3

Query: 429 HVIGAMNGLGVLXXHMIEPRMCVNXRMIPRRLLPFRKAFRGTFMVNGGYDREEGDRAVDE 250
           ++I  +   G+   HM EP                R  F G  +  G Y  E+ +  + +
Sbjct: 256 YLIEQLGKRGIAYLHMSEPDWAGGEPYTDAFREKVRARFHGPIIGAGAYTVEKAETLIGK 315

Query: 249 GYAHLVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYPFL 97
           G    VA+GR ++ANPDL  R +R A LN     +FY      GYTDYP L
Sbjct: 316 GLIDAVAFGRDWIANPDLVARLQRKAELNPQRAESFY-GGGAEGYTDYPTL 365



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>OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3)|
          Length = 399

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 27/45 (60%), Positives = 30/45 (66%)
 Frame = -3

Query: 237 LVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYP 103
           L+ YGR F++NPDL  R      LNKYDRSTFYT     GYTDYP
Sbjct: 343 LIGYGRFFISNPDLVYRLEEGLPLNKYDRSTFYTMS-AEGYTDYP 386



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>OYE2_YEAST (Q03558) NADPH dehydrogenase 2 (EC 1.6.99.1) (Old yellow enzyme 2)|
          Length = 399

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 24/45 (53%), Positives = 29/45 (64%)
 Frame = -3

Query: 237 LVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYP 103
           L+ YGR F++NPDL +R  +   LNKYDR TFY      GY DYP
Sbjct: 343 LIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYKMS-AEGYIDYP 386



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>OYE1_SACPS (Q02899) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)|
          Length = 399

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 24/45 (53%), Positives = 29/45 (64%)
 Frame = -3

Query: 237 LVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYP 103
           L+ YGR F++NPDL +R  +   LNKYDR TFY      GY DYP
Sbjct: 343 LIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYQMS-AHGYIDYP 386



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>KYE1_KLULA (P40952) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)|
          Length = 398

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 17/98 (17%)
 Frame = -3

Query: 345 PRRLLPFRKAFRG---------TFMVNGGYDREEGDRAVDEGYA--------HLVAYGRI 217
           PR   PF+  F G          + V  G     G+ A+D   A         L+ YGR 
Sbjct: 290 PRVTSPFQPEFEGWYKGGTNEFVYSVWKGNVLRVGNYALDPDAAITDSKNPNTLIGYGRA 349

Query: 216 FLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYP 103
           F+ANPDL ER  +   LN+YDR +FY      GY DYP
Sbjct: 350 FIANPDLVERLEKGLPLNQYDRPSFYKMS-AEGYIDYP 386



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>EBP1_CANAL (P43084) Probable NADPH dehydrogenase (EC 1.6.99.1)|
           (Estrogen-binding protein) (EBP)
          Length = 406

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
 Frame = -3

Query: 417 AMNGLGVLXXHMIEPRMC----VNXRMIPRRLLPFR-KAFRGTFMVNGGY--DREEGDRA 259
           A NG  +    ++EPR+     V+ +    R   F  K ++G F+  G Y  D  E    
Sbjct: 282 ADNGQQLAYISLVEPRVTGIYDVSLKDQQGRSNEFAYKIWKGNFIRAGNYTYDAPEFKTL 341

Query: 258 VDE--GYAHLVAYGRIFLANPDLPERFRRNAALNKYDRSTFY 139
           +++      ++ + R F +NPDL E+ +    LN Y+R  FY
Sbjct: 342 INDLKNDRSIIGFSRFFTSNPDLVEKLKLGKPLNYYNREEFY 383



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>YTHD1_HUMAN (Q9BYJ9) YTH domain protein 1 (Dermatomyositis associated with|
           cancer putative autoantigen 1) (DACA-1)
          Length = 559

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +1

Query: 199 VGVGQEDPPVRHKMGVAFVDGPVPFLPVVPAVHHEGAPECLPERQQAARDHP 354
           +G G   PP++H M +   D   P +P  P      +P+  P+ QQ A+  P
Sbjct: 256 MGGGLPPPPIKHNMDIGTWDNKGP-VPKAPVPQQAPSPQAAPQPQQVAQPLP 306



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>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein|
           (Atrophin-1-like protein) (Atrophin-1-related protein)
          Length = 1566

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
 Frame = +1

Query: 283 VPAVHHEGAPECLPERQQAARDHPXVDAHXRLDHVXXEDAEPVHGADHVQP----RAPPG 450
           VP  H + AP   P+R  +    P    H  L  +     +P     H QP    + PPG
Sbjct: 795 VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQP-SAPSHAQPPLHGQGPPG 853

Query: 451 PES 459
           P S
Sbjct: 854 PHS 856



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>YWLC_BACSU (P39153) Hypothetical protein ywlC|
          Length = 346

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 14/122 (11%)
 Frame = +1

Query: 109 IGVANNRIGCVEGAPVVLIQSGVPPEPLRQVGVG----------QEDPPVRHKMGVAFVD 258
           IGV +  + C +  PV+L   G+  E +  V +G          Q + P+   M      
Sbjct: 183 IGVESTVLSCADDIPVLLRPGGITKEQIEAV-IGPIHVDKGLSDQNEKPISPGMKYTH-- 239

Query: 259 GPVPFLPVVPAVHHEGAPE----CLPERQQAARDHPXVDAHXRLDHVXXEDAEPVHGADH 426
               + P  P    EG+PE     + E QQ  R         R+  +  E+   V+ AD+
Sbjct: 240 ----YAPTAPLAICEGSPERIQHLIQEYQQGGR---------RVGVLTTEEKAGVYSADY 286

Query: 427 VQ 432
           V+
Sbjct: 287 VK 288



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>SELV_HUMAN (P59797) Selenoprotein V|
          Length = 346

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
 Frame = +1

Query: 178 PPEPLRQVGVGQEDPPVRHKMGVAFVDGPVPFLPVVPAVHHEG--APECLPERQQAARDH 351
           PPEP  ++ +  E+ P            P P L ++P+V  E   AP  LP R   A + 
Sbjct: 154 PPEPAPELPLLPEEDPE-----------PAPSLKLIPSVSSEAGPAPGPLPTRTPLAANS 202

Query: 352 PXVDAHXRLDHVXXEDAEPVHGADHVQPRAPPGP 453
           P       LD     D   +  AD   P   P P
Sbjct: 203 PG----PTLDFTFRADPSAIGLADPPIPSPVPSP 232



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>YTHD1_MOUSE (P59326) YTH domain protein 1 (Dermatomyositis associated with|
           cancer putative autoantigen 1 homolog) (DACA-1 homolog)
          Length = 559

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +1

Query: 199 VGVGQEDPPVRHKMGVAFVDGPVPFLPVVPAVHHEGAPECLPERQQAARDHP 354
           VG     PP++H M +   D   P  P   A     +P+  P+ QQ A+  P
Sbjct: 256 VGGALPPPPIKHNMDIGTWDNKGP-APKASAPQQTPSPQAAPQPQQVAQPLP 306



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>MUC2L_RAT (P98089) Intestinal mucin-like protein (MLP) (Fragment)|
          Length = 837

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 260 PSTKATPILWRTGGSSWPTPTCRRGSGGTPL*ISTTGAPSTHP 132
           PST  TP   +T   S P+ T  + +  TP   S+   PST P
Sbjct: 25  PSTPTTPTSSQTTTPSTPSTTSSKSTPSTPQSTSSKSTPSTPP 67



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>SAS_DROME (Q04164) Putative epidermal cell surface receptor precursor (Stranded|
            at second protein)
          Length = 1693

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = +1

Query: 145  GAPVVLIQSGVPPEPLRQVGVGQEDPPVRHKMGVAFVDGPVPFLPVVPAVHHEGAPECLP 324
            G  V ++ SGVPP            PP  H  G+A VDG        P +   G P+  P
Sbjct: 1182 GHYVPIVHSGVPP------------PPPGH--GIAIVDGQTVAYESYPVIPGLGVPQHHP 1227

Query: 325  ERQQ 336
            ++ Q
Sbjct: 1228 QQHQ 1231



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>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)|
          Length = 1336

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
 Frame = +1

Query: 178 PPEPLRQVGVGQEDPPVRHKMGVAFVDGPVPFL-PVVPAVHHEGAPECLPERQ-----QA 339
           PP P  Q+G   + PP+    G     GP  F+ P  P    +G P+ LP  Q     Q 
Sbjct: 628 PPGPQGQMG--PQGPPLHQGGG-----GPQGFMGPQGP----QGPPQGLPRPQDMHGPQG 676

Query: 340 ARDHPXVDAHXRLDHVXXEDAEPVHGAD-HVQPRAPPGPES 459
            + HP    H  L        +   G   H+ P+ PPGP+S
Sbjct: 677 MQRHPG--PHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQS 715



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>SYNG_MOUSE (Q5SV85) AP1 gamma subunit-binding protein 1 (Gamma-synergin)|
          Length = 1306

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
 Frame = +1

Query: 13  IPTLSSYK-TLESPRSQAQQQ*N----SQLILMKKRVIGVANNRIGCVEGAPVVLIQSGV 177
           IPTLS +  TL +P SQ     +    S  + + + ++G+  N +G V GA        +
Sbjct: 383 IPTLSGFPMTLPTPVSQPTAMPSGPTGSMPLTLGQPIMGI--NLVGPVGGAAAPTSSGFM 440

Query: 178 PPEPLRQVGVGQED 219
           P  P  QVG  +ED
Sbjct: 441 PAYPSNQVGKTEED 454



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>PLS1_MOUSE (Q9JJ00) Phospholipid scramblase 1 (PL scramblase 1)|
           (Ca(2+)-dependent phospholipid scramblase 1)
           (Transplantability-associated protein 1) (TRA1) (NOR1)
          Length = 328

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 259 GPVPFLPVVPAVHHEGAPECLPERQQAARDHP 354
           GP P  PV P  +  G P   P + Q A +HP
Sbjct: 55  GPQPGYPVPPGGYAGGGPSGFPVQNQPAYNHP 86



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>SECA2_MYCLE (O32922) Preprotein translocase secA 2 subunit|
          Length = 778

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -3

Query: 318 AFRGTFMVNGGYDREEGDRAVDEGYAHLVAYGR 220
           A RGT +  GG D  + DR V+ G  H+V  GR
Sbjct: 496 AGRGTDIRLGGSDESDHDRVVELGGLHVVGTGR 528



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>EFG_FUSNN (Q8R602) Elongation factor G (EF-G)|
          Length = 693

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 136 CVEGAPVVLIQSGVPPEPLRQVGVGQEDPPVRHKMGVA 249
           C E AP+VL Q    PEP+  V V  +    + KMG+A
Sbjct: 392 CAENAPIVLEQMEF-PEPVISVAVEPKTKNDQEKMGIA 428



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>Y924_THET8 (Q56419) UPF0103 protein TTHA0924|
          Length = 326

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +1

Query: 124 NRIGCVEGAPVVLIQSGVPPEPLRQVGVGQEDPPVRHKMGVAFVDGPVPFLPVVP 288
           +R+  V GA +  ++   PPE +  VGV     P++ K     V    PF P +P
Sbjct: 104 SRVPEVYGAALAALEKTPPPERIYLVGVAHR--PLKEKAAALPVPFQTPFGPALP 156



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>PLS1_RAT (P58195) Phospholipid scramblase 1 (PL scramblase 1)|
           (Ca(2+)-dependent phospholipid scramblase 1)
          Length = 335

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 259 GPVPFLPVVPAVHHEGAPECLPERQQAARDHP 354
           GP P  PV P  +  G P   P + Q A +HP
Sbjct: 63  GPQPGYPVPPGSYAGGDPSGFPVQHQPAYNHP 94


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,164,479
Number of Sequences: 219361
Number of extensions: 1291391
Number of successful extensions: 3735
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3722
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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