| Clone Name | rbaal34d18 |
|---|---|
| Clone Library Name | barley_pub |
>OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (EC 1.3.1.-)| (LeOPR2) Length = 355 Score = 142 bits (358), Expect = 4e-34 Identities = 64/111 (57%), Positives = 87/111 (78%) Frame = -3 Query: 429 HVIGAMNGLGVLXXHMIEPRMCVNXRMIPRRLLPFRKAFRGTFMVNGGYDREEGDRAVDE 250 ++ ++ LGVL H++EPR VN R LLP RKAF+GT + +GGY + +G++A+DE Sbjct: 246 YMANELSKLGVLYLHVMEPRETVN-----RSLLPIRKAFKGTLIASGGYGKSDGEKAIDE 300 Query: 249 GYAHLVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYPFL 97 YA L+++GR+FLANPDLP+RF NA LNKY+RSTFYT+DP++GYTDYPFL Sbjct: 301 NYADLISFGRMFLANPDLPKRFEVNAPLNKYNRSTFYTNDPIIGYTDYPFL 351
>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (LeOPR1) Length = 376 Score = 135 bits (341), Expect = 4e-32 Identities = 64/113 (56%), Positives = 85/113 (75%), Gaps = 2/113 (1%) Frame = -3 Query: 429 HVIGAMNGLGVLXXHMIEPRMCVNXRMIP--RRLLPFRKAFRGTFMVNGGYDREEGDRAV 256 +++ ++N + H++EPRM I L+P RKA++GTF+V GGYDRE+G+RA+ Sbjct: 260 YMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRAL 319 Query: 255 DEGYAHLVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYPFL 97 E A LVAYGR+F++NPDLP+RF NA LNKY+R TFYTSDP+VGYTDYPFL Sbjct: 320 IEDRADLVAYGRLFISNPDLPKRFELNAPLNKYNRDTFYTSDPIVGYTDYPFL 372
>OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (AtOPR1) (FS-AT-I) Length = 372 Score = 134 bits (337), Expect = 1e-31 Identities = 66/109 (60%), Positives = 81/109 (74%), Gaps = 2/109 (1%) Frame = -3 Query: 417 AMNGLGVLXXHMIEPRMCVNXRM--IPRRLLPFRKAFRGTFMVNGGYDREEGDRAVDEGY 244 ++N G+L H+IE RM + P L+P RKAF+GTF+ GG+ RE+G+ AV +G Sbjct: 260 SLNKYGILYCHVIEARMKTMGEVHACPHTLMPMRKAFKGTFISAGGFTREDGNEAVSKGR 319 Query: 243 AHLVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYPFL 97 LVAYGR FLANPDLP+RF+ +A LNKYDR TFYTSDPVVGYTDYPFL Sbjct: 320 TDLVAYGRWFLANPDLPKRFQVDAPLNKYDRPTFYTSDPVVGYTDYPFL 368
>OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 2) (OPDA-reductase 2) (AtOPR2) Length = 374 Score = 132 bits (331), Expect = 6e-31 Identities = 65/113 (57%), Positives = 84/113 (74%), Gaps = 2/113 (1%) Frame = -3 Query: 429 HVIGAMNGLGVLXXHMIEPRMCVNXRMIP--RRLLPFRKAFRGTFMVNGGYDREEGDRAV 256 +++ ++N G+L HMIEPRM + L+P R+AF+GTF+ GG+ RE+G+ AV Sbjct: 258 YMVESLNKYGILYCHMIEPRMKTVGEIAACSHTLMPMREAFKGTFISAGGFTREDGNEAV 317 Query: 255 DEGYAHLVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYPFL 97 +G LVAYGR FLANPDLP+RF+ +A LNKY+RSTFYTSDPVVGYTDYP L Sbjct: 318 AKGRTDLVAYGRWFLANPDLPKRFQLDAPLNKYNRSTFYTSDPVVGYTDYPSL 370
>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) Length = 396 Score = 107 bits (266), Expect = 2e-23 Identities = 50/82 (60%), Positives = 62/82 (75%) Frame = -3 Query: 342 RRLLPFRKAFRGTFMVNGGYDREEGDRAVDEGYAHLVAYGRIFLANPDLPERFRRNAALN 163 R + R A++GTF+ +GGY RE G AV +G A LV+YGR+F++NPDL R + NA LN Sbjct: 303 RLMRTLRNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLN 362 Query: 162 KYDRSTFYTSDPVVGYTDYPFL 97 KY+R TFYT DPVVGYTDYPFL Sbjct: 363 KYNRKTFYTQDPVVGYTDYPFL 384
>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (Delayed dehiscence 1) (AtOPR3) Length = 391 Score = 106 bits (264), Expect = 3e-23 Identities = 48/76 (63%), Positives = 61/76 (80%) Frame = -3 Query: 324 RKAFRGTFMVNGGYDREEGDRAVDEGYAHLVAYGRIFLANPDLPERFRRNAALNKYDRST 145 R A+ GTFM +GG+++E G +AV +G A LV+YGR+F+ANPDL RF+ + LNKY+R T Sbjct: 310 RMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKT 369 Query: 144 FYTSDPVVGYTDYPFL 97 FYT DPVVGYTDYPFL Sbjct: 370 FYTQDPVVGYTDYPFL 385
>OPRL1_ARATH (Q8GYA3) Putative 12-oxophytodienoate reductase-like protein 1 (EC| 1.3.1.-) Length = 324 Score = 96.7 bits (239), Expect = 3e-20 Identities = 50/88 (56%), Positives = 60/88 (68%), Gaps = 2/88 (2%) Frame = -3 Query: 417 AMNGLGVLXXHMIEPRMCVNXRMIPRR--LLPFRKAFRGTFMVNGGYDREEGDRAVDEGY 244 ++N +L HMIEPRM + R L P R AF GTF+V GGY RE+G++AV EG Sbjct: 237 SLNRFEILYCHMIEPRMKTVSEIFECRESLTPMRNAFNGTFIVAGGYTREDGNKAVAEGR 296 Query: 243 AHLVAYGRIFLANPDLPERFRRNAALNK 160 LVAYGR+FLANPDLP+RF NA LNK Sbjct: 297 TDLVAYGRLFLANPDLPKRFELNAPLNK 324
>OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 392 Score = 75.9 bits (185), Expect = 5e-14 Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 3/99 (3%) Frame = -3 Query: 387 HMIEPRMCVNXRMI---PRRLLPFRKAFRGTFMVNGGYDREEGDRAVDEGYAHLVAYGRI 217 H IEPR N + + L ++ + F+ GG+DR+ + ++ LVA+GR Sbjct: 284 HAIEPRQYWNGHVHITQEKNTLIYKNLWGDPFITAGGHDRDSAIQMAEQENT-LVAFGRY 342 Query: 216 FLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYPF 100 FL+NPDLP R + N LNK+DR+TFYT GY DYPF Sbjct: 343 FLSNPDLPFRLKYNLPLNKWDRATFYTKMSPKGYIDYPF 381
>OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 382 Score = 73.2 bits (178), Expect = 3e-13 Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 3/99 (3%) Frame = -3 Query: 387 HMIEPRMCVNXRMI---PRRLLPFRKAFRGTFMVNGGYDREEGDRAVDEGYAHLVAYGRI 217 H IEPR + + + +K ++G F+ GGYD E +A +E LVA+GR Sbjct: 277 HAIEPRKYWSGHKLVSSEQNTSFLQKYWKGPFITAGGYDPETAVQAANERGV-LVAFGRN 335 Query: 216 FLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYPF 100 F+ANPDL R + + LNK+DRS+FY GYTDYPF Sbjct: 336 FIANPDLVFRIKHHIPLNKWDRSSFYLPKTEKGYTDYPF 374
>NEMA_ECOLI (P77258) N-ethylmaleimide reductase (EC 1.-.-.-) (N-ethylmaleimide| reducing enzyme) Length = 365 Score = 58.5 bits (140), Expect = 8e-09 Identities = 36/111 (32%), Positives = 50/111 (45%) Frame = -3 Query: 429 HVIGAMNGLGVLXXHMIEPRMCVNXRMIPRRLLPFRKAFRGTFMVNGGYDREEGDRAVDE 250 ++I + G+ HM EP R F G + G Y E+ + + + Sbjct: 256 YLIEQLGKRGIAYLHMSEPDWAGGEPYTDAFREKVRARFHGPIIGAGAYTVEKAETLIGK 315 Query: 249 GYAHLVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYPFL 97 G VA+GR ++ANPDL R +R A LN +FY GYTDYP L Sbjct: 316 GLIDAVAFGRDWIANPDLVARLQRKAELNPQRAESFY-GGGAEGYTDYPTL 365
>OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3)| Length = 399 Score = 58.2 bits (139), Expect = 1e-08 Identities = 27/45 (60%), Positives = 30/45 (66%) Frame = -3 Query: 237 LVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYP 103 L+ YGR F++NPDL R LNKYDRSTFYT GYTDYP Sbjct: 343 LIGYGRFFISNPDLVYRLEEGLPLNKYDRSTFYTMS-AEGYTDYP 386
>OYE2_YEAST (Q03558) NADPH dehydrogenase 2 (EC 1.6.99.1) (Old yellow enzyme 2)| Length = 399 Score = 54.3 bits (129), Expect = 2e-07 Identities = 24/45 (53%), Positives = 29/45 (64%) Frame = -3 Query: 237 LVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYP 103 L+ YGR F++NPDL +R + LNKYDR TFY GY DYP Sbjct: 343 LIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYKMS-AEGYIDYP 386
>OYE1_SACPS (Q02899) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 399 Score = 53.9 bits (128), Expect = 2e-07 Identities = 24/45 (53%), Positives = 29/45 (64%) Frame = -3 Query: 237 LVAYGRIFLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYP 103 L+ YGR F++NPDL +R + LNKYDR TFY GY DYP Sbjct: 343 LIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYQMS-AHGYIDYP 386
>KYE1_KLULA (P40952) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 398 Score = 53.5 bits (127), Expect = 3e-07 Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 17/98 (17%) Frame = -3 Query: 345 PRRLLPFRKAFRG---------TFMVNGGYDREEGDRAVDEGYA--------HLVAYGRI 217 PR PF+ F G + V G G+ A+D A L+ YGR Sbjct: 290 PRVTSPFQPEFEGWYKGGTNEFVYSVWKGNVLRVGNYALDPDAAITDSKNPNTLIGYGRA 349 Query: 216 FLANPDLPERFRRNAALNKYDRSTFYTSDPVVGYTDYP 103 F+ANPDL ER + LN+YDR +FY GY DYP Sbjct: 350 FIANPDLVERLEKGLPLNQYDRPSFYKMS-AEGYIDYP 386
>EBP1_CANAL (P43084) Probable NADPH dehydrogenase (EC 1.6.99.1)| (Estrogen-binding protein) (EBP) Length = 406 Score = 37.7 bits (86), Expect = 0.015 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 9/102 (8%) Frame = -3 Query: 417 AMNGLGVLXXHMIEPRMC----VNXRMIPRRLLPFR-KAFRGTFMVNGGY--DREEGDRA 259 A NG + ++EPR+ V+ + R F K ++G F+ G Y D E Sbjct: 282 ADNGQQLAYISLVEPRVTGIYDVSLKDQQGRSNEFAYKIWKGNFIRAGNYTYDAPEFKTL 341 Query: 258 VDE--GYAHLVAYGRIFLANPDLPERFRRNAALNKYDRSTFY 139 +++ ++ + R F +NPDL E+ + LN Y+R FY Sbjct: 342 INDLKNDRSIIGFSRFFTSNPDLVEKLKLGKPLNYYNREEFY 383
>YTHD1_HUMAN (Q9BYJ9) YTH domain protein 1 (Dermatomyositis associated with| cancer putative autoantigen 1) (DACA-1) Length = 559 Score = 33.1 bits (74), Expect = 0.36 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +1 Query: 199 VGVGQEDPPVRHKMGVAFVDGPVPFLPVVPAVHHEGAPECLPERQQAARDHP 354 +G G PP++H M + D P +P P +P+ P+ QQ A+ P Sbjct: 256 MGGGLPPPPIKHNMDIGTWDNKGP-VPKAPVPQQAPSPQAAPQPQQVAQPLP 306
>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-like protein) (Atrophin-1-related protein) Length = 1566 Score = 30.8 bits (68), Expect = 1.8 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 4/63 (6%) Frame = +1 Query: 283 VPAVHHEGAPECLPERQQAARDHPXVDAHXRLDHVXXEDAEPVHGADHVQP----RAPPG 450 VP H + AP P+R + P H L + +P H QP + PPG Sbjct: 795 VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQP-SAPSHAQPPLHGQGPPG 853 Query: 451 PES 459 P S Sbjct: 854 PHS 856
>YWLC_BACSU (P39153) Hypothetical protein ywlC| Length = 346 Score = 30.0 bits (66), Expect = 3.1 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 14/122 (11%) Frame = +1 Query: 109 IGVANNRIGCVEGAPVVLIQSGVPPEPLRQVGVG----------QEDPPVRHKMGVAFVD 258 IGV + + C + PV+L G+ E + V +G Q + P+ M Sbjct: 183 IGVESTVLSCADDIPVLLRPGGITKEQIEAV-IGPIHVDKGLSDQNEKPISPGMKYTH-- 239 Query: 259 GPVPFLPVVPAVHHEGAPE----CLPERQQAARDHPXVDAHXRLDHVXXEDAEPVHGADH 426 + P P EG+PE + E QQ R R+ + E+ V+ AD+ Sbjct: 240 ----YAPTAPLAICEGSPERIQHLIQEYQQGGR---------RVGVLTTEEKAGVYSADY 286 Query: 427 VQ 432 V+ Sbjct: 287 VK 288
>SELV_HUMAN (P59797) Selenoprotein V| Length = 346 Score = 30.0 bits (66), Expect = 3.1 Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 2/94 (2%) Frame = +1 Query: 178 PPEPLRQVGVGQEDPPVRHKMGVAFVDGPVPFLPVVPAVHHEG--APECLPERQQAARDH 351 PPEP ++ + E+ P P P L ++P+V E AP LP R A + Sbjct: 154 PPEPAPELPLLPEEDPE-----------PAPSLKLIPSVSSEAGPAPGPLPTRTPLAANS 202 Query: 352 PXVDAHXRLDHVXXEDAEPVHGADHVQPRAPPGP 453 P LD D + AD P P P Sbjct: 203 PG----PTLDFTFRADPSAIGLADPPIPSPVPSP 232
>YTHD1_MOUSE (P59326) YTH domain protein 1 (Dermatomyositis associated with| cancer putative autoantigen 1 homolog) (DACA-1 homolog) Length = 559 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = +1 Query: 199 VGVGQEDPPVRHKMGVAFVDGPVPFLPVVPAVHHEGAPECLPERQQAARDHP 354 VG PP++H M + D P P A +P+ P+ QQ A+ P Sbjct: 256 VGGALPPPPIKHNMDIGTWDNKGP-APKASAPQQTPSPQAAPQPQQVAQPLP 306
>MUC2L_RAT (P98089) Intestinal mucin-like protein (MLP) (Fragment)| Length = 837 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = -1 Query: 260 PSTKATPILWRTGGSSWPTPTCRRGSGGTPL*ISTTGAPSTHP 132 PST TP +T S P+ T + + TP S+ PST P Sbjct: 25 PSTPTTPTSSQTTTPSTPSTTSSKSTPSTPQSTSSKSTPSTPP 67
>SAS_DROME (Q04164) Putative epidermal cell surface receptor precursor (Stranded| at second protein) Length = 1693 Score = 29.3 bits (64), Expect = 5.2 Identities = 20/64 (31%), Positives = 27/64 (42%) Frame = +1 Query: 145 GAPVVLIQSGVPPEPLRQVGVGQEDPPVRHKMGVAFVDGPVPFLPVVPAVHHEGAPECLP 324 G V ++ SGVPP PP H G+A VDG P + G P+ P Sbjct: 1182 GHYVPIVHSGVPP------------PPPGH--GIAIVDGQTVAYESYPVIPGLGVPQHHP 1227 Query: 325 ERQQ 336 ++ Q Sbjct: 1228 QQHQ 1231
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 28.9 bits (63), Expect = 6.8 Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 7/101 (6%) Frame = +1 Query: 178 PPEPLRQVGVGQEDPPVRHKMGVAFVDGPVPFL-PVVPAVHHEGAPECLPERQ-----QA 339 PP P Q+G + PP+ G GP F+ P P +G P+ LP Q Q Sbjct: 628 PPGPQGQMG--PQGPPLHQGGG-----GPQGFMGPQGP----QGPPQGLPRPQDMHGPQG 676 Query: 340 ARDHPXVDAHXRLDHVXXEDAEPVHGAD-HVQPRAPPGPES 459 + HP H L + G H+ P+ PPGP+S Sbjct: 677 MQRHPG--PHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQS 715
>SYNG_MOUSE (Q5SV85) AP1 gamma subunit-binding protein 1 (Gamma-synergin)| Length = 1306 Score = 28.9 bits (63), Expect = 6.8 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%) Frame = +1 Query: 13 IPTLSSYK-TLESPRSQAQQQ*N----SQLILMKKRVIGVANNRIGCVEGAPVVLIQSGV 177 IPTLS + TL +P SQ + S + + + ++G+ N +G V GA + Sbjct: 383 IPTLSGFPMTLPTPVSQPTAMPSGPTGSMPLTLGQPIMGI--NLVGPVGGAAAPTSSGFM 440 Query: 178 PPEPLRQVGVGQED 219 P P QVG +ED Sbjct: 441 PAYPSNQVGKTEED 454
>PLS1_MOUSE (Q9JJ00) Phospholipid scramblase 1 (PL scramblase 1)| (Ca(2+)-dependent phospholipid scramblase 1) (Transplantability-associated protein 1) (TRA1) (NOR1) Length = 328 Score = 28.9 bits (63), Expect = 6.8 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +1 Query: 259 GPVPFLPVVPAVHHEGAPECLPERQQAARDHP 354 GP P PV P + G P P + Q A +HP Sbjct: 55 GPQPGYPVPPGGYAGGGPSGFPVQNQPAYNHP 86
>SECA2_MYCLE (O32922) Preprotein translocase secA 2 subunit| Length = 778 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = -3 Query: 318 AFRGTFMVNGGYDREEGDRAVDEGYAHLVAYGR 220 A RGT + GG D + DR V+ G H+V GR Sbjct: 496 AGRGTDIRLGGSDESDHDRVVELGGLHVVGTGR 528
>EFG_FUSNN (Q8R602) Elongation factor G (EF-G)| Length = 693 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +1 Query: 136 CVEGAPVVLIQSGVPPEPLRQVGVGQEDPPVRHKMGVA 249 C E AP+VL Q PEP+ V V + + KMG+A Sbjct: 392 CAENAPIVLEQMEF-PEPVISVAVEPKTKNDQEKMGIA 428
>Y924_THET8 (Q56419) UPF0103 protein TTHA0924| Length = 326 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = +1 Query: 124 NRIGCVEGAPVVLIQSGVPPEPLRQVGVGQEDPPVRHKMGVAFVDGPVPFLPVVP 288 +R+ V GA + ++ PPE + VGV P++ K V PF P +P Sbjct: 104 SRVPEVYGAALAALEKTPPPERIYLVGVAHR--PLKEKAAALPVPFQTPFGPALP 156
>PLS1_RAT (P58195) Phospholipid scramblase 1 (PL scramblase 1)| (Ca(2+)-dependent phospholipid scramblase 1) Length = 335 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +1 Query: 259 GPVPFLPVVPAVHHEGAPECLPERQQAARDHP 354 GP P PV P + G P P + Q A +HP Sbjct: 63 GPQPGYPVPPGSYAGGDPSGFPVQHQPAYNHP 94 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,164,479 Number of Sequences: 219361 Number of extensions: 1291391 Number of successful extensions: 3735 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3496 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3722 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)