No.
Definition
Score (bits)
E Value
1 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
230
3e-57
2 dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic D...
230
3e-57
3 dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic D...
230
3e-57
4 dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clon...
230
3e-57
5 dbj|AK121554.1| Oryza sativa (japonica cultivar-group) cDNA clon...
180
3e-42
6 gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4...
62
2e-06
7 gb|AY921639.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR2...
48
0.026
8 gb|AY921638.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR1...
48
0.026
9 gb|DQ078769.1| Zea mays clone Zmcoi6.12 cold-inducible unknown mRNA
48
0.026
10 emb|AJ557139.1|OSA557139 Oryza sativa (japonica cultivar-group) ...
48
0.026
11 emb|AJ557138.1|OSA557138 Oryza sativa (japonica cultivar-group) ...
48
0.026
12 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
48
0.026
13 dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic D...
48
0.026
14 dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D...
48
0.026
15 dbj|AB122088.1| Oryza sativa (japonica cultivar-group) OPDAR1 g...
48
0.026
16 dbj|AK103067.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.026
17 gb|AY108052.1| Zea mays PCO079165 mRNA sequence
48
0.026
18 dbj|AB040743.1| Oryza sativa RRJ4 mRNA for 12-oxophytodienoic ac...
48
0.026
19 ref|NM_100809.3| Arabidopsis thaliana carboxylic ester hydrolase...
46
0.10
20 ref|NM_100810.1| Arabidopsis thaliana 12-oxophytodienoate reduct...
46
0.10
21 gb|AY921643.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR6...
46
0.10
22 ref|XM_506828.1| PREDICTED Oryza sativa (japonica cultivar-group...
46
0.10
23 ref|XM_466236.1| Oryza sativa (japonica cultivar-group), mRNA
46
0.10
24 gb|AY641547.1| Halomonas maura nitrate-reductase operon, complet...
46
0.10
25 gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genom...
46
0.10
26 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.10
27 dbj|AP005883.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.10
28 dbj|AK117769.1| Arabidopsis thaliana At1g09400 mRNA for putative...
46
0.10
29 dbj|AK069898.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.10
30 dbj|AK059887.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.10
31 gb|AY106849.1| Zea mays PCO134627 mRNA sequence
46
0.10
32 gb|AY921640.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR3...
44
0.40
33 dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.40
34 dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.40
35 dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.40
36 dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.40
37 gb|AC087045.7| Homo sapiens chromosome 8, clone CTD-2342N23, com...
42
1.6
38 emb|BX814348.1|CNS0ABZY Arabidopsis thaliana Full-length cDNA Co...
42
1.6
39 emb|CT030638.12| Mouse DNA sequence from clone RP23-340M21 on ch...
42
1.6
40 ref|NM_106319.3| Arabidopsis thaliana OPR2; 12-oxophytodienoate ...
40
6.3
41 ref|NM_106320.2| Arabidopsis thaliana heat shock protein binding...
40
6.3
42 ref|NM_201702.1| Arabidopsis thaliana OPR3; 12-oxophytodienoate ...
40
6.3
43 ref|NM_126619.2| Arabidopsis thaliana OPR3; 12-oxophytodienoate ...
40
6.3
44 ref|NM_192568.1| Oryza sativa (japonica cultivar-group), predic...
40
6.3
45 gb|AE007230.1| Sinorhizobium meliloti 1021 plasmid pSymA section...
40
6.3
46 gb|BT025251.1| Arabidopsis thaliana At1g76690 mRNA, complete cds
40
6.3
47 gb|AC153919.8| Mus musculus 10 BAC RP23-91E23 (Roswell Park Canc...
40
6.3
48 ref|XM_821981.1| Trypanosoma brucei TREU927 adenosine monophosph...
40
6.3
49 ref|XM_822370.1| Trypanosoma brucei TREU927 6-phosphogluconate d...
40
6.3
50 emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete ch...
40
6.3
51 gb|L28920.2|YSCCHR1RAA Saccharomyces cerevisiae chromosome I rig...
40
6.3
52 gb|AC159474.9| Mus musculus 10 BAC RP23-28P17 (Roswell Park Canc...
40
6.3
53 emb|AJ238149.1|ATH238149 Arabidopsis thaliana mRNA for 12-oxo-ph...
40
6.3
54 emb|X65623.1|TBGNDG T.brucei gnd gene for 6-phosphogluconate deh...
40
6.3
55 gb|CP000133.1| Rhizobium etli CFN 42, complete genome
40
6.3
56 gb|AY097367.1| Arabidopsis thaliana At2g06050/F5K7.19 mRNA, comp...
40
6.3
57 gb|AC006413.4| Arabidopsis thaliana chromosome 2 clone F5K7 map ...
40
6.3
58 gb|AF410322.1|AF410322 Arabidopsis thaliana At2g06050/F5K7.19 mR...
40
6.3
59 gb|AF370582.1|AF370582 Arabidopsis thaliana 12-oxophytodienoate-...
40
6.3
60 emb|BX816752.1|CNS0ABN0 Arabidopsis thaliana Full-length cDNA Co...
40
6.3
61 emb|BX816748.1|CNS0ABM5 Arabidopsis thaliana Full-length cDNA Co...
40
6.3
62 emb|BX820381.1|CNS0A9HJ Arabidopsis thaliana Full-length cDNA Co...
40
6.3
63 emb|BX819897.1|CNS0A9ET Arabidopsis thaliana Full-length cDNA Co...
40
6.3
64 gb|AF132212.1|AF132212 Arabidopsis thaliana OPDA-reductase homol...
40
6.3
65 dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic D...
40
6.3
66 gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28...
40
6.3
67 gb|AF293653.1|AF293653 Arabidopsis thaliana 12-oxo-phytodienoate...
40
6.3
68 gb|AF218257.1|AF218257 Arabidopsis thaliana 12-oxo-phytodienoate...
40
6.3
69 dbj|AK117738.1| Arabidopsis thaliana At1g76690 mRNA for putative...
40
6.3
70 dbj|AB108499.1| Lithospermum erythrorhizon mRNA for LEDI-5c prot...
40
6.3
71 dbj|AK106409.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
6.3
72 dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
6.3
73 dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
6.3
74 gb|AY362358.2| Romalea microptera transferrin mRNA, complete cds
40
6.3
75 gb|U92460.1|ATU92460 Arabidopsis thaliana 12-oxophytodienoate re...
40
6.3
76 gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone ...
40
6.3
77 gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
40
6.3
78 gb|AC131779.4| Mus musculus BAC clone RP24-336D11 from 8, comple...
40
6.3
79 gb|U00029.1|YSCH9177 Saccharomyces cerevisiae chromosome VIII co...
40
6.3
80 gb|U19726.1|RMU19726 Rhizobium meliloti GroES (groES) and GroEL ...
40
6.3
81 gb|M94192.1|RHMGROESLA Rhizobium meliloti (strain RM 1021, clone...
40
6.3
>dbj|AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 230 bits (116), Expect = 3e-57
Identities = 212/244 (86%)
Strand = Plus / Plus
Query: 98 agaaaagggtaatcggtgtagccaacaacaggatcggatgtgtagaaggtgctcctgtcg 157
||||| ||||| || |||||||| || |||||||| || || ||||| |||||||||||
Sbjct: 15167315 agaaacgggtagtccgtgtagcccaccacaggatcagaggtatagaacgtgctcctgtca 15167374
Query: 158 tacttattcagagcggcgttcctcctgaacctctccggcaggtcggggttggccaagaag 217
||||| |||||| | || |||||||||||||||||||||||||| |||||||||| |||
Sbjct: 15167375 tacttgttcagacctgccttcctcctgaacctctccggcaggtcagggttggccaggaac 15167434
Query: 218 atccgcccgtacgccacaagatgggcgtagccttcgtcgacggccctgtccccttcctcc 277
| ||||||||||||||| || | ||||||||| ||| |||| ||| |||| ||||| |||
Sbjct: 15167435 agccgcccgtacgccaccaggtcggcgtagccgtcggcgaccgccttgtcgccttcgtcc 15167494
Query: 278 cggtcgtacccgccgttcaccatgaaggtgcccctgaatgccttcctgaacggcagcagg 337
||||||||||| |||||||||||||| ||||||| ||| |||||||||||||| ||||||
Sbjct: 15167495 cggtcgtacccaccgttcaccatgaacgtgccccggaacgccttcctgaacggaagcagg 15167554
Query: 338 cggc 341
||||
Sbjct: 15167555 cggc 15167558
Score = 180 bits (91), Expect = 3e-42
Identities = 211/251 (84%)
Strand = Plus / Plus
Query: 97 aagaaaagggtaatcggtgtagccaacaacaggatcggatgtgtagaaggtgctcctgtc 156
|||||| ||||| || |||||||| || |||||||| | ||||||||||||||||||||
Sbjct: 15175077 aagaaacgggtagtccgtgtagcccaccacaggatcaggcgtgtagaaggtgctcctgtc 15175136
Query: 157 gtacttattcagagcggcgttcctcctgaacctctccggcaggtcggggttggccaagaa 216
||| |||||||| || ||| |||||||||||||||||||||||||||||||| |||
Sbjct: 15175137 atacgcgttcagagccgccttctgcctgaacctctccggcaggtcggggttggccaggaa 15175196
Query: 217 gatccgcccgtacgccacaagatgggcgtagccttcgtcgacggccctgtccccttcctc 276
| | |||||||| ||| || | ||||||||| ||| |||| ||| |||||||||||||
Sbjct: 15175197 caatctcccgtacgacaccaggtcggcgtagccgtcgccgaccgccttgtccccttcctc 15175256
Query: 277 ccggtcgtacccgccgttcaccatgaaggtgcccctgaatgccttcctgaacggcagcag 336
|||||||||||| |||||||| ||||| ||||| ||| ||| | |||||||| |||||
Sbjct: 15175257 ccggtcgtaccctccgttcacaatgaacgtgccgtggaacgcccttctgaacgggagcag 15175316
Query: 337 gcggcgcggga 347
|||| ||||||
Sbjct: 15175317 gcggtgcggga 15175327
Score = 81.8 bits (41), Expect = 2e-12
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 373 cggctcgatcatgtggnantagaggacgccgagcccgttcatggcgccgatcacgtgcag 432
||||||||||| |||| | |||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 15175375 cggctcgatcacgtggcagtagaggacgccgaggccgttcatgacgccgatcaggtgcag 15175434
Query: 433 ccgcgagcgcctccgggtc 451
||||| | ||||||||||
Sbjct: 15175435 -cgcgacctcctccgggtc 15175452
Score = 75.8 bits (38), Expect = 1e-10
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 361 gacgcacatncgcggctcgatcatgtggnantagaggacgccgagcccgttcatggcgcc 420
||||||||| | |||||||||||||||| | |||||||||||||| ||||||| |||
Sbjct: 15167599 gacgcacattctcggctcgatcatgtggcagtagaggacgccgaggttgttcatgaggcc 15167658
Query: 421 gatcacgtgcagccgcgagcgcctccgggtc 451
||||||| |||| |||||| ||||||||||
Sbjct: 15167659 gatcacgcgcag-cgcgaggacctccgggtc 15167688
Score = 40.1 bits (20), Expect = 6.3
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 238 atgggcgtagccttcgtcgacggc 261
|||| |||||||||||||||||||
Sbjct: 22995574 atggccgtagccttcgtcgacggc 22995551
>dbj|AP003236.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0043B10
Length = 167399
Score = 230 bits (116), Expect = 3e-57
Identities = 212/244 (86%)
Strand = Plus / Plus
Query: 98 agaaaagggtaatcggtgtagccaacaacaggatcggatgtgtagaaggtgctcctgtcg 157
||||| ||||| || |||||||| || |||||||| || || ||||| |||||||||||
Sbjct: 139281 agaaacgggtagtccgtgtagcccaccacaggatcagaggtatagaacgtgctcctgtca 139340
Query: 158 tacttattcagagcggcgttcctcctgaacctctccggcaggtcggggttggccaagaag 217
||||| |||||| | || |||||||||||||||||||||||||| |||||||||| |||
Sbjct: 139341 tacttgttcagacctgccttcctcctgaacctctccggcaggtcagggttggccaggaac 139400
Query: 218 atccgcccgtacgccacaagatgggcgtagccttcgtcgacggccctgtccccttcctcc 277
| ||||||||||||||| || | ||||||||| ||| |||| ||| |||| ||||| |||
Sbjct: 139401 agccgcccgtacgccaccaggtcggcgtagccgtcggcgaccgccttgtcgccttcgtcc 139460
Query: 278 cggtcgtacccgccgttcaccatgaaggtgcccctgaatgccttcctgaacggcagcagg 337
||||||||||| |||||||||||||| ||||||| ||| |||||||||||||| ||||||
Sbjct: 139461 cggtcgtacccaccgttcaccatgaacgtgccccggaacgccttcctgaacggaagcagg 139520
Query: 338 cggc 341
||||
Sbjct: 139521 cggc 139524
Score = 180 bits (91), Expect = 3e-42
Identities = 211/251 (84%)
Strand = Plus / Plus
Query: 97 aagaaaagggtaatcggtgtagccaacaacaggatcggatgtgtagaaggtgctcctgtc 156
|||||| ||||| || |||||||| || |||||||| | ||||||||||||||||||||
Sbjct: 147043 aagaaacgggtagtccgtgtagcccaccacaggatcaggcgtgtagaaggtgctcctgtc 147102
Query: 157 gtacttattcagagcggcgttcctcctgaacctctccggcaggtcggggttggccaagaa 216
||| |||||||| || ||| |||||||||||||||||||||||||||||||| |||
Sbjct: 147103 atacgcgttcagagccgccttctgcctgaacctctccggcaggtcggggttggccaggaa 147162
Query: 217 gatccgcccgtacgccacaagatgggcgtagccttcgtcgacggccctgtccccttcctc 276
| | |||||||| ||| || | ||||||||| ||| |||| ||| |||||||||||||
Sbjct: 147163 caatctcccgtacgacaccaggtcggcgtagccgtcgccgaccgccttgtccccttcctc 147222
Query: 277 ccggtcgtacccgccgttcaccatgaaggtgcccctgaatgccttcctgaacggcagcag 336
|||||||||||| |||||||| ||||| ||||| ||| ||| | |||||||| |||||
Sbjct: 147223 ccggtcgtaccctccgttcacaatgaacgtgccgtggaacgcccttctgaacgggagcag 147282
Query: 337 gcggcgcggga 347
|||| ||||||
Sbjct: 147283 gcggtgcggga 147293
Score = 81.8 bits (41), Expect = 2e-12
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 373 cggctcgatcatgtggnantagaggacgccgagcccgttcatggcgccgatcacgtgcag 432
||||||||||| |||| | |||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 147341 cggctcgatcacgtggcagtagaggacgccgaggccgttcatgacgccgatcaggtgcag 147400
Query: 433 ccgcgagcgcctccgggtc 451
||||| | ||||||||||
Sbjct: 147401 -cgcgacctcctccgggtc 147418
Score = 75.8 bits (38), Expect = 1e-10
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 361 gacgcacatncgcggctcgatcatgtggnantagaggacgccgagcccgttcatggcgcc 420
||||||||| | |||||||||||||||| | |||||||||||||| ||||||| |||
Sbjct: 139565 gacgcacattctcggctcgatcatgtggcagtagaggacgccgaggttgttcatgaggcc 139624
Query: 421 gatcacgtgcagccgcgagcgcctccgggtc 451
||||||| |||| |||||| ||||||||||
Sbjct: 139625 gatcacgcgcag-cgcgaggacctccgggtc 139654
>dbj|AP002914.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0493G01
Length = 167587
Score = 230 bits (116), Expect = 3e-57
Identities = 212/244 (86%)
Strand = Plus / Plus
Query: 98 agaaaagggtaatcggtgtagccaacaacaggatcggatgtgtagaaggtgctcctgtcg 157
||||| ||||| || |||||||| || |||||||| || || ||||| |||||||||||
Sbjct: 20688 agaaacgggtagtccgtgtagcccaccacaggatcagaggtatagaacgtgctcctgtca 20747
Query: 158 tacttattcagagcggcgttcctcctgaacctctccggcaggtcggggttggccaagaag 217
||||| |||||| | || |||||||||||||||||||||||||| |||||||||| |||
Sbjct: 20748 tacttgttcagacctgccttcctcctgaacctctccggcaggtcagggttggccaggaac 20807
Query: 218 atccgcccgtacgccacaagatgggcgtagccttcgtcgacggccctgtccccttcctcc 277
| ||||||||||||||| || | ||||||||| ||| |||| ||| |||| ||||| |||
Sbjct: 20808 agccgcccgtacgccaccaggtcggcgtagccgtcggcgaccgccttgtcgccttcgtcc 20867
Query: 278 cggtcgtacccgccgttcaccatgaaggtgcccctgaatgccttcctgaacggcagcagg 337
||||||||||| |||||||||||||| ||||||| ||| |||||||||||||| ||||||
Sbjct: 20868 cggtcgtacccaccgttcaccatgaacgtgccccggaacgccttcctgaacggaagcagg 20927
Query: 338 cggc 341
||||
Sbjct: 20928 cggc 20931
Score = 180 bits (91), Expect = 3e-42
Identities = 211/251 (84%)
Strand = Plus / Plus
Query: 97 aagaaaagggtaatcggtgtagccaacaacaggatcggatgtgtagaaggtgctcctgtc 156
|||||| ||||| || |||||||| || |||||||| | ||||||||||||||||||||
Sbjct: 28450 aagaaacgggtagtccgtgtagcccaccacaggatcaggcgtgtagaaggtgctcctgtc 28509
Query: 157 gtacttattcagagcggcgttcctcctgaacctctccggcaggtcggggttggccaagaa 216
||| |||||||| || ||| |||||||||||||||||||||||||||||||| |||
Sbjct: 28510 atacgcgttcagagccgccttctgcctgaacctctccggcaggtcggggttggccaggaa 28569
Query: 217 gatccgcccgtacgccacaagatgggcgtagccttcgtcgacggccctgtccccttcctc 276
| | |||||||| ||| || | ||||||||| ||| |||| ||| |||||||||||||
Sbjct: 28570 caatctcccgtacgacaccaggtcggcgtagccgtcgccgaccgccttgtccccttcctc 28629
Query: 277 ccggtcgtacccgccgttcaccatgaaggtgcccctgaatgccttcctgaacggcagcag 336
|||||||||||| |||||||| ||||| ||||| ||| ||| | |||||||| |||||
Sbjct: 28630 ccggtcgtaccctccgttcacaatgaacgtgccgtggaacgcccttctgaacgggagcag 28689
Query: 337 gcggcgcggga 347
|||| ||||||
Sbjct: 28690 gcggtgcggga 28700
Score = 81.8 bits (41), Expect = 2e-12
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 373 cggctcgatcatgtggnantagaggacgccgagcccgttcatggcgccgatcacgtgcag 432
||||||||||| |||| | |||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 28748 cggctcgatcacgtggcagtagaggacgccgaggccgttcatgacgccgatcaggtgcag 28807
Query: 433 ccgcgagcgcctccgggtc 451
||||| | ||||||||||
Sbjct: 28808 -cgcgacctcctccgggtc 28825
Score = 75.8 bits (38), Expect = 1e-10
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 361 gacgcacatncgcggctcgatcatgtggnantagaggacgccgagcccgttcatggcgcc 420
||||||||| | |||||||||||||||| | |||||||||||||| ||||||| |||
Sbjct: 20972 gacgcacattctcggctcgatcatgtggcagtagaggacgccgaggttgttcatgaggcc 21031
Query: 421 gatcacgtgcagccgcgagcgcctccgggtc 451
||||||| |||| |||||| ||||||||||
Sbjct: 21032 gatcacgcgcag-cgcgaggacctccgggtc 21061
>dbj|AP008212.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 48.1 bits (24), Expect = 0.026
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 97 aagaaaagggtaatcggtgtagccaacaacaggatc 132
||||||||||||||| || ||||||||||| |||||
Sbjct: 5929176 aagaaaagggtaatctgtatagccaacaacgggatc 5929211
Score = 46.1 bits (23), Expect = 0.10
Identities = 80/99 (80%)
Strand = Plus / Plus
Query: 193 cggcaggtcggggttggccaagaagatccgcccgtacgccacaagatgggcgtagccttc 252
||||| ||| ||||| |||||||||| || |||||| || || |||| ||| ||||| ||
Sbjct: 5924009 cggcaagtcagggttagccaagaagagcctcccgtaggcgacgagatcggcatagccatc 5924068
Query: 253 gtcgacggccctgtccccttcctcccggtcgtacccgcc 291
| || || ||| ||||||||||||||| ||||||||
Sbjct: 5924069 agccaccaccttgttcccttcctcccggtcatacccgcc 5924107
Score = 46.1 bits (23), Expect = 0.10
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 194 ggcaggtcggggttggccaagaagatccgcccgtacgccacaagatgggcgtagccttcg 253
|||| |||||||||||||||||||| || ||| || || || || | ||| ||||| ||
Sbjct: 5910516 ggcaagtcggggttggccaagaagagcctcccataggcgacgaggtcggcatagccatca 5910575
Query: 254 tcgacggccctgtccccttcctcccggtcgtaccc 288
|| || || ||| ||||||||||||||| |||||
Sbjct: 5910576 tccaccaccttgttcccttcctcccggtcataccc 5910610
Score = 44.1 bits (22), Expect = 0.40
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 269 ccttcctcccggtcgtacccgccgttcaccatgaaggtgcccctgaatgccttcctgaac 328
|||||||||||||| ||||| ||| | ||||| |||||| |||| || ||||||||
Sbjct: 5895808 ccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttcctgaat 5895867
Query: 329 ggcagcaggc 338
||||||||||
Sbjct: 5895868 ggcagcaggc 5895877
Score = 40.1 bits (20), Expect = 6.3
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 268 cccttcctcccggtcgtacccgcc 291
||||||||||||||| ||||||||
Sbjct: 5929347 cccttcctcccggtcatacccgcc 5929370
Score = 40.1 bits (20), Expect = 6.3
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 97 aagaaaagggtaatcggtgtagccaacaacaggatc 132
||||||||||||||| || || |||||||| |||||
Sbjct: 5923913 aagaaaagggtaatctgtataaccaacaacgggatc 5923948
Score = 40.1 bits (20), Expect = 6.3
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 101 aaagggtaatcggtgtagccaacaacaggatc 132
||||||||||| ||||||||||| || |||||
Sbjct: 5910423 aaagggtaatccgtgtagccaacgacgggatc 5910454
Score = 40.1 bits (20), Expect = 6.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 113 gtgtagccaacaacaggatc 132
||||||||||||||||||||
Sbjct: 5905869 gtgtagccaacaacaggatc 5905888
>dbj|AP004741.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBb0024N18
Length = 128739
Score = 48.1 bits (24), Expect = 0.026
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 97 aagaaaagggtaatcggtgtagccaacaacaggatc 132
||||||||||||||| || ||||||||||| |||||
Sbjct: 50828 aagaaaagggtaatctgtatagccaacaacgggatc 50863
Score = 46.1 bits (23), Expect = 0.10
Identities = 80/99 (80%)
Strand = Plus / Plus
Query: 193 cggcaggtcggggttggccaagaagatccgcccgtacgccacaagatgggcgtagccttc 252
||||| ||| ||||| |||||||||| || |||||| || || |||| ||| ||||| ||
Sbjct: 45661 cggcaagtcagggttagccaagaagagcctcccgtaggcgacgagatcggcatagccatc 45720
Query: 253 gtcgacggccctgtccccttcctcccggtcgtacccgcc 291
| || || ||| ||||||||||||||| ||||||||
Sbjct: 45721 agccaccaccttgttcccttcctcccggtcatacccgcc 45759
Score = 46.1 bits (23), Expect = 0.10
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 194 ggcaggtcggggttggccaagaagatccgcccgtacgccacaagatgggcgtagccttcg 253
|||| |||||||||||||||||||| || ||| || || || || | ||| ||||| ||
Sbjct: 32168 ggcaagtcggggttggccaagaagagcctcccataggcgacgaggtcggcatagccatca 32227
Query: 254 tcgacggccctgtccccttcctcccggtcgtaccc 288
|| || || ||| ||||||||||||||| |||||
Sbjct: 32228 tccaccaccttgttcccttcctcccggtcataccc 32262
Score = 44.1 bits (22), Expect = 0.40
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 269 ccttcctcccggtcgtacccgccgttcaccatgaaggtgcccctgaatgccttcctgaac 328
|||||||||||||| ||||| ||| | ||||| |||||| |||| || ||||||||
Sbjct: 17460 ccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttcctgaat 17519
Query: 329 ggcagcaggc 338
||||||||||
Sbjct: 17520 ggcagcaggc 17529
Score = 40.1 bits (20), Expect = 6.3
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 268 cccttcctcccggtcgtacccgcc 291
||||||||||||||| ||||||||
Sbjct: 50999 cccttcctcccggtcatacccgcc 51022
Score = 40.1 bits (20), Expect = 6.3
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 97 aagaaaagggtaatcggtgtagccaacaacaggatc 132
||||||||||||||| || || |||||||| |||||
Sbjct: 45565 aagaaaagggtaatctgtataaccaacaacgggatc 45600
Score = 40.1 bits (20), Expect = 6.3
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 101 aaagggtaatcggtgtagccaacaacaggatc 132
||||||||||| ||||||||||| || |||||
Sbjct: 32075 aaagggtaatccgtgtagccaacgacgggatc 32106
Score = 40.1 bits (20), Expect = 6.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 113 gtgtagccaacaacaggatc 132
||||||||||||||||||||
Sbjct: 27521 gtgtagccaacaacaggatc 27540
>dbj|AP003525.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0537F07
Length = 147724
Score = 48.1 bits (24), Expect = 0.026
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 97 aagaaaagggtaatcggtgtagccaacaacaggatc 132
||||||||||||||| || ||||||||||| |||||
Sbjct: 129951 aagaaaagggtaatctgtatagccaacaacgggatc 129986
Score = 46.1 bits (23), Expect = 0.10
Identities = 80/99 (80%)
Strand = Plus / Plus
Query: 193 cggcaggtcggggttggccaagaagatccgcccgtacgccacaagatgggcgtagccttc 252
||||| ||| ||||| |||||||||| || |||||| || || |||| ||| ||||| ||
Sbjct: 124784 cggcaagtcagggttagccaagaagagcctcccgtaggcgacgagatcggcatagccatc 124843
Query: 253 gtcgacggccctgtccccttcctcccggtcgtacccgcc 291
| || || ||| ||||||||||||||| ||||||||
Sbjct: 124844 agccaccaccttgttcccttcctcccggtcatacccgcc 124882
Score = 46.1 bits (23), Expect = 0.10
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 194 ggcaggtcggggttggccaagaagatccgcccgtacgccacaagatgggcgtagccttcg 253
|||| |||||||||||||||||||| || ||| || || || || | ||| ||||| ||
Sbjct: 111291 ggcaagtcggggttggccaagaagagcctcccataggcgacgaggtcggcatagccatca 111350
Query: 254 tcgacggccctgtccccttcctcccggtcgtaccc 288
|| || || ||| ||||||||||||||| |||||
Sbjct: 111351 tccaccaccttgttcccttcctcccggtcataccc 111385
Score = 44.1 bits (22), Expect = 0.40
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 269 ccttcctcccggtcgtacccgccgttcaccatgaaggtgcccctgaatgccttcctgaac 328
|||||||||||||| ||||| ||| | ||||| |||||| |||| || ||||||||
Sbjct: 96583 ccttcctcccggtcatacccaccggcggcgatgaacgtgcccttgaaagctttcctgaat 96642
Query: 329 ggcagcaggc 338
||||||||||
Sbjct: 96643 ggcagcaggc 96652
Score = 40.1 bits (20), Expect = 6.3
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 268 cccttcctcccggtcgtacccgcc 291
||||||||||||||| ||||||||
Sbjct: 130122 cccttcctcccggtcatacccgcc 130145
Score = 40.1 bits (20), Expect = 6.3
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 97 aagaaaagggtaatcggtgtagccaacaacaggatc 132
||||||||||||||| || || |||||||| |||||
Sbjct: 124688 aagaaaagggtaatctgtataaccaacaacgggatc 124723
Score = 40.1 bits (20), Expect = 6.3
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 101 aaagggtaatcggtgtagccaacaacaggatc 132
||||||||||| ||||||||||| || |||||
Sbjct: 111198 aaagggtaatccgtgtagccaacgacgggatc 111229
Score = 40.1 bits (20), Expect = 6.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 113 gtgtagccaacaacaggatc 132
||||||||||||||||||||
Sbjct: 106644 gtgtagccaacaacaggatc 106663
>gb|M94192.1 |RHMGROESLA Rhizobium meliloti (strain RM 1021, clone pGEM-RhzA) GroEL and GroES
(groESL operon A) genes, complete cds's
Length = 3196
Score = 40.1 bits (20), Expect = 6.3
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 315 atgccttcctgaacggcagc 334
||||||||||||||||||||
Sbjct: 2224 atgccttcctgaacggcagc 2205
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,763,762
Number of Sequences: 3902068
Number of extensions: 2763762
Number of successful extensions: 48392
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 48057
Number of HSP's gapped (non-prelim): 338
length of query: 464
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 442
effective length of database: 17,147,199,772
effective search space: 7579062299224
effective search space used: 7579062299224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)